BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043524
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 122/226 (53%), Gaps = 5/226 (2%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H ++L+L G C+ +LV+ Y+ +G++ + P++ PL +R + A+ +A L
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGL 152
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAP 198
AYLH I+ RD K ++IL EE + DF L+ + + H+ V GT GH+AP
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAP 212
Query: 199 QYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEI 258
+Y++T SEK DV+ +G L EL+TG+ DL R A+D +++K ++ + +
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 272
Query: 259 VDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARRL 304
VD DL K++++ Q+ C SP++RP M +V R L
Sbjct: 273 VDV----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 11/270 (4%)
Query: 35 NGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPI 94
G+ + + + LK+E Q ++ + ++ A H ++L+L G C+
Sbjct: 48 KGRLADGXLVAVKRLKEERT---QGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTE 101
Query: 95 AILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDF 154
+LV+ Y+ +G++ + P++ PL +R + A+ +A LAYLH I+ RD
Sbjct: 102 RLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDV 160
Query: 155 KTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYS 214
K ++IL EE + DF L+ + + H+ V G GH+AP+Y++T SEK DV+
Sbjct: 161 KAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFG 220
Query: 215 FGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQ 274
+G L EL+TG+ DL R A+D +++K ++ + +VD DL K++
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV----DLQGNYKDE 276
Query: 275 QLHASAQLTFECLNESPIDRPTMVDVARRL 304
++ Q+ C SP++RP M +V R L
Sbjct: 277 EVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 117/229 (51%), Gaps = 15/229 (6%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H H++ LIG C E IL+++Y+++G L + G+ + ++RL+ + AA L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITDTVMGTYGHLA 197
YLH R I+ RD K+ +IL E V K+ DF +S E G+TH+ V GT G++
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 198 PQYVTTCDFSEKLDVYSFGAFLSELLTGRG--ILDLVRDAHDLVYPFNEYLKNYFEDNRF 255
P+Y +EK DVYSFG L E+L R + L R+ +L E+ + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA----EWAVESHNNGQL 265
Query: 256 TEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARRL 304
+IVDP +L+ + + L +CL S DRP+M DV +L
Sbjct: 266 EQIVDP----NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H H++ LIG C E IL+++Y+++G L + G+ + ++RL+ + AA L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARGL 152
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITDTVMGTYGHLA 197
YLH R I+ RD K+ +IL E V K+ DF +S E +TH+ V GT G++
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 198 PQYVTTCDFSEKLDVYSFGAFLSELLTGRG--ILDLVRDAHDLVYPFNEYLKNYFEDNRF 255
P+Y +EK DVYSFG L E+L R + L R+ +L E+ + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA----EWAVESHNNGQL 265
Query: 256 TEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARRL 304
+IVDP +L+ + + L +CL S DRP+M DV +L
Sbjct: 266 EQIVDP----NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 60/313 (19%)
Query: 41 YRIFSAQELKQETNNYDQKN-------------GFWHESCINNVTYA------------- 74
+ FS ELK TNN+D++ G ++ +NN T A
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 75 -------------AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL---GAPQTH 118
A+ H+++++L+G + LV+ Y+ +G+L DR+ G P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
PL R K A AAN + +LH + RD K+++IL E K+ DF L+ +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 179 PE-GETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHD 237
+ +T + ++GT ++AP+ + + + K D+YSFG L E++TG +D R+
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 238 LVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTM 297
L+ E + + + D T E ++Q CL+E RP +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKK----MNDADSTSVEAMYSVASQ----CLHEKKNKRPDI 294
Query: 298 VDVARRLRQICCS 310
V + L+++ S
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 60/313 (19%)
Query: 41 YRIFSAQELKQETNNYDQKN-------------GFWHESCINNVTYA------------- 74
+ FS ELK TNN+D++ G ++ +NN T A
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 75 -------------AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL---GAPQTH 118
A+ H+++++L+G + LV+ Y+ +G+L DR+ G P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 128
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
PL R K A AAN + +LH + RD K+++IL E K+ DF L+ +
Sbjct: 129 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 179 PE-GETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHD 237
+ +T + ++GT ++AP+ + + + K D+YSFG L E++TG +D R+
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 238 LVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTM 297
L+ E + + + D T E ++Q CL+E RP +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKK----MNDADSTSVEAMYSVASQ----CLHEKKNKRPDI 294
Query: 298 VDVARRLRQICCS 310
V + L+++ S
Sbjct: 295 KKVQQLLQEMTAS 307
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 50/247 (20%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
A + H +I+ L G CL+ P LV E+ + G L +R+L P +L + AV
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSG--KRIPPDIL---VNWAVQI 114
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEE--------NVVKLFDFSLSISIPEGETHIT 186
A + YLH PI+ RD K+S+IL ++ ++K+ DF L+ E H T
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRT 169
Query: 187 D--TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG----RGILDLVRDAHDLVY 240
+ G Y +AP+ + FS+ DV+S+G L ELLTG RGI D + Y
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI-----DGLAVAY 224
Query: 241 PFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDV 300
++ PI +C E A+L +C N P RP+ ++
Sbjct: 225 GV-----------AMNKLALPI---PSTCPEP------FAKLMEDCWNPDPHSRPSFTNI 264
Query: 301 ARRLRQI 307
+L I
Sbjct: 265 LDQLTTI 271
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 15/160 (9%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL---LLKRRLKDA 131
++++H +I+KL G CL P+ LV EY + G+L++ + GA EPL +
Sbjct: 56 SRVNHPNIVKLYGACL-NPVC-LVMEYAEGGSLYNVLHGA-----EPLPYYTAAHAMSWC 108
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILF-SEENVVKLFDFSLSISIPEGETHITDTVM 190
+ + +AYLH P+ ++ RD K ++L + V+K+ DF + I +TH+T+
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-K 164
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
G+ +AP+ ++SEK DV+S+G L E++T R D
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 15/160 (9%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL---LLKRRLKDA 131
++++H +I+KL G CL P+ LV EY + G+L++ + GA EPL +
Sbjct: 57 SRVNHPNIVKLYGACL-NPVC-LVMEYAEGGSLYNVLHGA-----EPLPYYTAAHAMSWC 109
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILF-SEENVVKLFDFSLSISIPEGETHITDTVM 190
+ + +AYLH P+ ++ RD K ++L + V+K+ DF + I +TH+T+
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-K 165
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
G+ +AP+ ++SEK DV+S+G L E++T R D
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ V ++ H +I+ +G + P +V EY+ G+L+ R+L E L +RR
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAR-EQLDERRR 139
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L A D A + YLH P PIV RD K+ ++L ++ VK+ DF LS + +
Sbjct: 140 LSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSK 197
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
GT +AP+ + +EK DVYSFG L EL T
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 60/313 (19%)
Query: 41 YRIFSAQELKQETNNYDQKN-------------GFWHESCINNVTYA------------- 74
+ FS ELK TNN+D++ G ++ +NN T A
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 75 -------------AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL---GAPQTH 118
A+ H+++++L+G + LV+ Y+ +G+L DR+ G P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP--- 122
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
PL R K A AAN + +LH + RD K+++IL E K+ DF L+ +
Sbjct: 123 --PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 179 PE-GETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHD 237
+ + + ++GT ++AP+ + + + K D+YSFG L E++TG +D R+
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 236
Query: 238 LVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTM 297
L+ E + + + D T E ++Q CL+E RP +
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKK----MNDADSTSVEAMYSVASQ----CLHEKKNKRPDI 288
Query: 298 VDVARRLRQICCS 310
V + L+++ S
Sbjct: 289 KKVQQLLQEMTAS 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ V ++ H +I+ +G + P +V EY+ G+L+ R+L E L +RR
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAR-EQLDERRR 139
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L A D A + YLH P PIV R+ K+ ++L ++ VK+ DF LS + +
Sbjct: 140 LSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKASTFLSSK 197
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ GT +AP+ + +EK DVYSFG L EL T
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++I+ S N VK+ DF ++ +I + +T T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++I+ S N VK+ DF ++ +I + +T T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++I+ S N VK+ DF ++ +I + +T T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++I+ S N VK+ DF ++ +I + +T T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 136
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++I+ S N VK+ DF ++ +I + +T T
Sbjct: 137 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 130/313 (41%), Gaps = 60/313 (19%)
Query: 41 YRIFSAQELKQETNNYDQKN-------------GFWHESCINNVTYA------------- 74
+ FS ELK TNN+D++ G ++ +NN T A
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 75 -------------AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL---GAPQTH 118
A+ H+++++L+G + LV+ Y +G+L DR+ G P
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP--- 119
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
PL R K A AAN + +LH + RD K+++IL E K+ DF L+ +
Sbjct: 120 --PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 179 PEGETHITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHD 237
+ + + ++GT + AP+ + + + K D+YSFG L E++TG +D R+
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 238 LVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTM 297
L+ E + + D T E ++Q CL+E RP +
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKK----XNDADSTSVEAXYSVASQ----CLHEKKNKRPDI 285
Query: 298 VDVARRLRQICCS 310
V + L++ S
Sbjct: 286 KKVQQLLQEXTAS 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 74 AAQMSHDHILKLIGCC-LETPIAIL---VFEYVQHGTLWDRILGAPQTHFE-PLLLKRRL 128
AA ++H I+ + ETP L V EYV TL D + H E P+ KR +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+ DA AL + H I+ RD K ++IL S N VK+ DF ++ +I + + T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 189 --VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
V+GT +L+P+ + DVYS G L E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 28/247 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E I ++SH +++L G CLE LVFE+++HG L D + +T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFA 101
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L +D +AYL ++ RD + L E V+K+ DF ++ + + +
Sbjct: 102 AETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +P+ + +S K DV+SFG + E+ + I
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP-------------- 204
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARR 303
+E+ +E+V+ I + H Q+ C E P DRP + R+
Sbjct: 205 ------YENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 304 LRQICCS 310
L I S
Sbjct: 258 LAAIAAS 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 41/254 (16%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L A +T FE +K+ +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHASETKFE---MKKLI 123
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITD 187
A A + YLH + I+ RD K+++I E+N VK+ DF L+ +H +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNE 244
+ G+ +AP+ + D +S + DVY+FG L EL+TG+ P++
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-------------LPYS- 226
Query: 245 YLKNYFEDNRFTEIVD-PIIVQDLS-----CTEKEQQLHASAQLTFECLNESPIDRPTMV 298
N ++ E+V + DLS C ++ ++L A ECL + +RP+
Sbjct: 227 ---NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFP 277
Query: 299 DVARRLRQICCSLS 312
+ + ++ LS
Sbjct: 278 RILAEIEELARELS 291
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 41/254 (16%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L A +T FE +K+ +
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHASETKFE---MKKLI 111
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+N VK+ DF L ++ +H +
Sbjct: 112 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNE 244
+ G+ +AP+ + D +S + DVY+FG L EL+TG+ P++
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-------------LPYS- 214
Query: 245 YLKNYFEDNRFTEIVD-PIIVQDLS-----CTEKEQQLHASAQLTFECLNESPIDRPTMV 298
N ++ E+V + DLS C ++ ++L A ECL + +RP+
Sbjct: 215 ---NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA------ECLKKKRDERPSFP 265
Query: 299 DVARRLRQICCSLS 312
+ + ++ LS
Sbjct: 266 RILAEIEELARELS 279
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 28/244 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E I ++SH +++L G CLE LVFE+++HG L D + +T
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFA 104
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L +D +AYL ++ RD + L E V+K+ DF ++ + + +
Sbjct: 105 AETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +P+ + +S K DV+SFG + E+ + I
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP-------------- 207
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARR 303
+E+ +E+V+ I + H Q+ C E P DRP + R+
Sbjct: 208 ------YENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWRERPEDRPAFSRLLRQ 260
Query: 304 LRQI 307
L +I
Sbjct: 261 LAEI 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 28/244 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E I ++SH +++L G CLE LVFE+++HG L D + +T
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFA 101
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L +D +AYL ++ RD + L E V+K+ DF ++ + + +
Sbjct: 102 AETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +P+ + +S K DV+SFG + E+ + I
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP-------------- 204
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARR 303
+E+ +E+V+ I + H Q+ C E P DRP + R+
Sbjct: 205 ------YENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 304 LRQI 307
L +I
Sbjct: 258 LAEI 261
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ ++H +I+KL G P +V E+V G L+ R+L + H P+ +L+ +D
Sbjct: 78 SNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAH--PIKWSVKLRLMLDI 131
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFS--EENV---VKLFDFSLSISIPEGETHITDTV 189
A + Y+ P PIV RD ++ +I +EN K+ DFSLS + H +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGL 186
Query: 190 MGTYGHLAPQYVTTCD--FSEKLDVYSFGAFLSELLTGRGILD 230
+G + +AP+ + + ++EK D YSF L +LTG G D
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 28/244 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E I ++SH +++L G CLE LVFE+++HG L D + +T
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFA 99
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L +D +AYL ++ RD + L E V+K+ DF ++ + + +
Sbjct: 100 AETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +P+ + +S K DV+SFG + E+ + I
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP-------------- 202
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARR 303
+E+ +E+V+ I + H Q+ C E P DRP + R+
Sbjct: 203 ------YENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWKERPEDRPAFSRLLRQ 255
Query: 304 LRQI 307
L +I
Sbjct: 256 LAEI 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I ++SH +++L G CLE LVFE+++HG L D + +T +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETL 125
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L +D +AYL ++ RD + L E V+K+ DF ++ + + + +
Sbjct: 126 LGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLK 247
+P+ + +S K DV+SFG + E+ F+E K
Sbjct: 183 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV-------------------FSEG-K 222
Query: 248 NYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARRLRQI 307
+E+ +E+V+ I + H Q+ C E P DRP + R+L +I
Sbjct: 223 IPYENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G +AI V ++ + +L+ L A +T FE +K+ +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHH-LHASETKFE---MKKLI 123
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITD 187
A A + YLH + I+ RD K+++I E+N VK+ DF L+ +H +
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 16 RTLMIGNGASVLQELIASS-NGKYIPYRIFSAQ---ELKQETNNYDQKNGFWHESCINNV 71
RTL G+ V LI S NG+Y ++ + LKQ + D++
Sbjct: 12 RTLGTGSFGRV--HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER------------ 57
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
+ ++H I+++ G + ++ +Y++ G L+ +L Q P+ A
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFY----A 112
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG 191
+ AL YLH + I++RD K +IL + +K+ DF + +P+ +T + G
Sbjct: 113 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCG 165
Query: 192 TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
T ++AP+ V+T +++ +D +SFG + E+L G
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ ++H +I+KL G P +V E+V G L+ R+L + H P+ +L+ +D
Sbjct: 78 SNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAH--PIKWSVKLRLMLDI 131
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFS--EENV---VKLFDFSLSISIPEGETHITDTV 189
A + Y+ P PIV RD ++ +I +EN K+ DF LS + H +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGL 186
Query: 190 MGTYGHLAPQYVTTCD--FSEKLDVYSFGAFLSELLTGRGILD 230
+G + +AP+ + + ++EK D YSF L +LTG G D
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL-----------GAPQTHFEPLLLK 125
+ H HI++ G C E ++VFEY++HG L +R L G PL L
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 126 RRLKDAVDAANALAY---LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
+ L A A + Y LHF V RD T + L + VVK+ DF +S I +
Sbjct: 159 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 183 TH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + M + P+ + F+ + DV+SFG L E+ T
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL-----------GAPQTHFEPLLLK 125
+ H HI++ G C E ++VFEY++HG L +R L G PL L
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 126 RRLKDAVDAANALAY---LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
+ L A A + Y LHF V RD T + L + VVK+ DF +S I +
Sbjct: 130 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 183 TH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + M + P+ + F+ + DV+SFG L E+ T
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL-----------GAPQTHFEPLLLK 125
+ H HI++ G C E ++VFEY++HG L +R L G PL L
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 126 RRLKDAVDAANALAY---LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
+ L A A + Y LHF V RD T + L + VVK+ DF +S I +
Sbjct: 136 QLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 183 TH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + M + P+ + F+ + DV+SFG L E+ T
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 28/244 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E I ++SH +++L G CLE LV E+++HG L D + +T
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFA 102
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L +D +AYL ++ RD + L E V+K+ DF ++ + + +
Sbjct: 103 AETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +P+ + +S K DV+SFG + E+ + I
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP-------------- 205
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARR 303
+E+ +E+V+ I + H Q+ C E P DRP + R+
Sbjct: 206 ------YENRSNSEVVEDISTGFRLYKPRLASTHV-YQIMNHCWRERPEDRPAFSRLLRQ 258
Query: 304 LRQI 307
L +I
Sbjct: 259 LAEI 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 48 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 101
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 102 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 158
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P DT+ GT +L P+ + EK+D++S G E L G+
Sbjct: 159 APSSRR---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 119
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 225
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E +L+ QL C E P DRPT
Sbjct: 226 GYR--------MVRPDNCPE---ELY---QLMRLCWKERPEDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 120
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 226
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 227 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 257
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 119
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 225
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 226 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 256
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ ++H +I+KL G P +V E+V G L+ R+L + H P+ +L+ +D
Sbjct: 78 SNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAH--PIKWSVKLRLMLDI 131
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFS--EENV---VKLFDFSLSISIPEGETHITDTV 189
A + Y+ P PIV RD ++ +I +EN K+ DF S + H +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGL 186
Query: 190 MGTYGHLAPQYVTTCD--FSEKLDVYSFGAFLSELLTGRGILD 230
+G + +AP+ + + ++EK D YSF L +LTG G D
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 121
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 227
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 228 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 119
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 225
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 226 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 125
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 231
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E +L+ QL C E P DRPT
Sbjct: 232 GYR--------MVRPDNCPE---ELY---QLMRLCWKERPEDRPT 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 127
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 233
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E +L+ QL C E P DRPT
Sbjct: 234 GYR--------MVRPDNCPE---ELY---QLMRLCWKERPEDRPT 264
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 51 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 108 RFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVH 161
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
P DT+ GT +L P+ + EK+D++S G E L G
Sbjct: 162 APSSRR---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 74 AAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVD 133
++Q+SH +I+ +I E LV EY++ TL + I ++H PL + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHG-PLSVDTAINFTNQ 119
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
+ + + H IV RD K +IL +K+FDF ++ ++ E T+ V+GT
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
+ +P+ E D+YS G L E+L G
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 128
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 234
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 235 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 114
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 220
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 221 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 251
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 119
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 225
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 226 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 256
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLETPIAIL--VFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ H+HI+K GCC + A L V EYV G+L D + P+ + L + L A
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 143
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-----TDTV 189
+AYLH + + RD ++L + +VK+ DF L+ ++PEG D+
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ Y AP+ + F DV+SFG L ELLT
Sbjct: 201 VFWY---APECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 125
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 231
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 232 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 124
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 230
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 231 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 261
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ H+HI+K GCC + LV EYV G+L D + P+ + L + L A
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PR---HCVGLAQLLLFAQQI 120
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT-----DTV 189
+AYLH + + R ++L + +VK+ DF L+ ++PEG + D+
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ Y AP+ + C F DV+SFG L ELLT
Sbjct: 178 VFWY---APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 129
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + RD + ++IL S+ K+ DF L+ I + E +
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 235
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E +L+ QL C E P DRPT
Sbjct: 236 GYR--------MVRPDNCPE---ELY---QLMRLCWKERPEDRPT 266
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKY---LRL 103
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 104 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 161 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 235 AHDLVYP 241
+ + P
Sbjct: 221 GYRMPCP 227
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ H+HI+K GCC + LV EYV G+L D + P+ + L + L A
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PR---HCVGLAQLLLFAQQI 121
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT-----DTV 189
+AYLH + + R ++L + +VK+ DF L+ ++PEG + D+
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ Y AP+ + C F DV+SFG L ELLT
Sbjct: 179 VFWY---APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 117
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 118 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 117
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 118 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 123
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 123
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 113
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 113
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I V + H ++++L G L TP +V E G+L DR L Q HF LL
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDR-LRKHQGHF---LLGTL 113
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--I 185
+ AV A + YL + + RD ++L + ++VK+ DF L ++P+ + H +
Sbjct: 114 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + AP+ + T FS D + FG L E+ T
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTL--------WDRILGAPQTHFEPLLLKRRL 128
+ H+HI+K G C+E I+VFEY++HG L D +L A L + L
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 129 KDAVDAANALAYL---HFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH- 184
A A + YL HF V RD T + L E +VK+ DF +S + + +
Sbjct: 132 HIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ M + P+ + F+ + DV+S G L E+ T
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 52 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 106 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 163 APSSR---RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 73 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 126
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 127 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 183
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P D + GT +L P+ + EK+D++S G E L G+
Sbjct: 184 APSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL------------GAPQTHFEPLLL 124
+ H+HI+K G C + I+VFEY++HG L ++ L G P+ L L
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 125 KRRLKDAVDAANALAYL---HFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEG 181
+ L A A+ + YL HF V RD T + L +VK+ DF +S +
Sbjct: 133 SQMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 182 ETH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + + M + P+ + F+ + DV+SFG L E+ T
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QAHAERIDHIKLLQYTSQI 126
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRL 106
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 107 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 163
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 164 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
Query: 235 AHDLVYP 241
+ + P
Sbjct: 224 GYRMPCP 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRL 279
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 280 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 235 AHDLVYP 241
+ + P
Sbjct: 397 GYRMPCP 403
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRL 279
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 280 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 235 AHDLVYP 241
+ + P
Sbjct: 397 GYRMPCP 403
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 106
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 107 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P D + GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 126
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 64 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 117
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 118 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 174
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 175 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 122
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 123 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 61/315 (19%)
Query: 20 IGNGA--SVLQELIASSNG--KYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAA 75
IG GA V Q A + G Y P+ + + + LK+E + D + F E+ + A
Sbjct: 55 IGEGAFGRVFQ---ARAPGLLPYEPFTMVAVKMLKEEASA-DMQADFQREAAL-----MA 105
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQT-----HFE--------- 120
+ + +I+KL+G C L+FEY+ +G L + + +P T H +
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 121 ----PLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
PL +L A A +AYL R V RD T + L E VVK+ DF LS
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 177 SIPEGETHITDTVMG-TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDA 235
+I + + D + P+ + ++ + DV+++G L E+ + G+ A
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS-YGLQPYYGMA 281
Query: 236 H-DLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK-EQQLHASAQLTFECLNESPID 293
H +++Y Y D L+C E +L+ +L C ++ P D
Sbjct: 282 HEEVIY--------YVRDGNI-----------LACPENCPLELYNLMRL---CWSKLPAD 319
Query: 294 RPTMVDVARRLRQIC 308
RP+ + R L+++C
Sbjct: 320 RPSFCSIHRILQRMC 334
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q+ H +++L + PI I+ EY+++G+L D L P L + + L A A
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVD-FLKTPSGI--KLTINKLLDMAAQIA 115
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A++ R + R+ + ++IL S+ K+ DF L+ I + E +
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAHDLVYPF---NEYLKNYFE 251
AP+ + F+ K DV+SFG L+E++T GR + YP E ++N
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-----------IPYPGMTNPEVIQNLER 221
Query: 252 DNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
R +V+ +C E+ QL C E P DRPT
Sbjct: 222 GYR--------MVRPDNCPEELYQLMRL------CWKERPEDRPT 252
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 52 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 106 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 163 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 141
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 121
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 122 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 127
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 128 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 130
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 131 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKY---LRL 279
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 280 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 235 AHDLVYP 241
+ + P
Sbjct: 397 GYRMPCP 403
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 102
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 103 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 159
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 160 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
Query: 235 AHDLVYP 241
+ + P
Sbjct: 220 GYRMPCP 226
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 154
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 155 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 106
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 107 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 129
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 130 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 128
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 129 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 100
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 101 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 123
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET--HITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 73 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 126
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 127 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 183
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 184 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 46 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 102
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 103 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 156
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 157 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 44 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 100
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 101 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 154
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 155 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 104
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 105 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 161
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 162 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
Query: 235 AHDLVYP 241
+ + P
Sbjct: 222 GYRMPCP 228
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 51 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 108 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 161
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 162 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
RI++ + +K+E N D ++ W ++ + +H ++ L C V EY
Sbjct: 78 RIYAMRVVKKELVN-DDEDIDWVQT--EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 134
Query: 102 VQHGTLW---DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSH 158
V G L R P+ H R A + + AL YLH R I++RD K +
Sbjct: 135 VNGGDLMFHMQRQRKLPEEH-------ARFYSA-EISLALNYLH---ERGIIYRDLKLDN 183
Query: 159 ILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGA 217
+L E +KL D+ + + G+T T T GT ++AP+ + D+ +D ++ G
Sbjct: 184 VLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 218 FLSELLTGRGILDLV 232
+ E++ GR D+V
Sbjct: 242 LMFEMMAGRSPFDIV 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY G ++ +
Sbjct: 52 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----Q 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 106 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 163 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 51 QETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDR 110
+ET D K F E+ I Q SH +I++LIG C + +V E VQ G
Sbjct: 148 RETLPPDLKAKFLQEARI-----LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF--- 199
Query: 111 ILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLF 170
L +T L +K L+ DAA + YL + + RD + L +E+NV+K+
Sbjct: 200 -LTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKIS 255
Query: 171 DFSLSISIPEGETHITDTVMGTYGHL--------APQYVTTCDFSEKLDVYSFGAFLSEL 222
DF +S D V G L AP+ + +S + DV+SFG L E
Sbjct: 256 DFGMS-------REEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 223 LT 224
+
Sbjct: 309 FS 310
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKY---LRL 362
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 363 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Query: 235 AHDLVYP 241
+ + P
Sbjct: 480 GYRMPCP 486
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 51 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 108 RFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVH 161
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
P T+ GT +L P+ + EK+D++S G E L G
Sbjct: 162 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
+K+ + + Q N W + I V + ++ H + ++ GC L A LV EY G+
Sbjct: 84 IKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSAS 141
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
D + + H +PL A LAYLH ++ RD K +IL SE +VK
Sbjct: 142 DLL----EVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 194
Query: 169 LFDF-SLSISIPEGETHITDTVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSEL 222
L DF S SI P + +GT +AP+ + D + K+DV+S G EL
Sbjct: 195 LGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 51 QETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDR 110
+ET D K F E+ I Q SH +I++LIG C + +V E VQ G
Sbjct: 148 RETLPPDLKAKFLQEARI-----LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF--- 199
Query: 111 ILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLF 170
L +T L +K L+ DAA + YL + + RD + L +E+NV+K+
Sbjct: 200 -LTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKIS 255
Query: 171 DFSLSISIPEGETHITDTVMGTYGHL--------APQYVTTCDFSEKLDVYSFGAFLSEL 222
DF +S D V G L AP+ + +S + DV+SFG L E
Sbjct: 256 DFGMS-------REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 223 LT 224
+
Sbjct: 309 FS 310
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
+K+ + + Q N W + I V + ++ H + ++ GC L A LV EY G+
Sbjct: 45 IKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSAS 102
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
D + + H +PL A LAYLH ++ RD K +IL SE +VK
Sbjct: 103 DLL----EVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155
Query: 169 LFDF-SLSISIPEGETHITDTVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSEL 222
L DF S SI P + +GT +AP+ + D + K+DV+S G EL
Sbjct: 156 LGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN A ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICIN-----AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKY---LRL 110
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + + A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 111 PQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT 167
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 168 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 235 AHDLVYP 241
+ + P
Sbjct: 228 GYRMPCP 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKY---LRL 110
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + + A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 111 PQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 168 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 235 AHDLVYP 241
+ + P
Sbjct: 228 GYRMPCP 234
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 280
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L I + E
Sbjct: 281 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 338 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
Query: 235 AHDLVYP 241
+ + P
Sbjct: 398 GYRMPCP 404
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ EY+ +G+L D + Q H E + + L+
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QKHKERIDHIKLLQYTSQI 124
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH--ITDTVMGT 192
+ YL G R + R+ T +IL EN VK+ DF L+ +P+ + + + +
Sbjct: 125 CKGMEYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFE-PLLLKRRLK 129
+T +Q ++ K G L+ ++ EY+ G+ D + P F+ +LK LK
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK 131
Query: 130 DAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTV 189
L YLH + RD K +++L SE+ VKL DF ++ + + + +T
Sbjct: 132 -------GLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTF 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+GT +AP+ + + K D++S G EL G D H + F N
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE---PPNSDMHPMRVLFLIPKNN- 236
Query: 250 FEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
P +V D + + KE CLN+ P RPT ++ +
Sbjct: 237 ----------PPTLVGDFTKSFKE--------FIDACLNKDPSFRPTAKELLK 271
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 13 KGKRTLMIGNGASVL--QELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINN 70
KG+R L G+ V+ ++ I G+ ++ S +++KQ+T+ ES +
Sbjct: 29 KGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDK---------ESLLRE 76
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
V Q+ H +I+KL + LV E G L+D I+ + F + R ++
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARIIRQ 134
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGETHITD 187
+ + + Y+H IV RD K ++L S++ +++ DF LS E + D
Sbjct: 135 VL---SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKD 187
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 188 KI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQT 117
KN ++ + + Q+ H ++++L+G +E + +V EY+ G+L D + ++
Sbjct: 44 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
L LK ++D A+ YL V RD ++L SE+NV K+ DF L+
Sbjct: 104 VLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-- 155
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ + DT AP+ + FS K DV+SFG L E+ + GR
Sbjct: 156 --KEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G ++ L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 13 KGKRTLMIGNGASVL--QELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINN 70
KG+R L G+ V+ ++ I G+ ++ S +++KQ+T+ ES +
Sbjct: 35 KGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDK---------ESLLRE 82
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
V Q+ H +I+KL + LV E G L+D I+ + F + R ++
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARIIRQ 140
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGETHITD 187
+ + + Y+H IV RD K ++L S++ +++ DF LS E + D
Sbjct: 141 VL---SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKD 193
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 194 KI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 16 RTLMIGNG--ASVLQELIASSNGKY-IPYRIFSAQELKQETNNYDQKNGFWHESCINNVT 72
R +IG G V + ++ +S+GK +P I + + E D F E+ I
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD----FLGEAGI---- 99
Query: 73 YAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV 132
Q SH +I++L G + +++ EY+++G L D+ L F L L L+
Sbjct: 100 -MGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIA 157
Query: 133 DAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT 192
LA +++ V RD +IL + V K+ DF LS + E + T T G
Sbjct: 158 AGMKYLANMNY------VHRDLAARNILVNSNLVCKVSDFGLS-RVLEDDPEATYTTSGG 210
Query: 193 YGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ AP+ ++ F+ DV+SFG + E++T
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQT 117
KN ++ + + Q+ H ++++L+G +E + +V EY+ G+L D + ++
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
L LK ++D A+ YL V RD ++L SE+NV K+ DF L+
Sbjct: 113 VLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-- 164
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ + DT AP+ + FS K DV+SFG L E+ + GR
Sbjct: 165 --KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 13 KGKRTLMIGNGASVL--QELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINN 70
KG+R L G+ V+ ++ I G+ ++ S +++KQ+T+ ES +
Sbjct: 52 KGQRVLGKGSFGEVILCKDKI---TGQECAVKVISKRQVKQKTDK---------ESLLRE 99
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
V Q+ H +I+KL + LV E G L+D I+ + F + R ++
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARIIRQ 157
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGETHITD 187
+ + + Y+H IV RD K ++L S++ +++ DF LS E + D
Sbjct: 158 VL---SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKD 210
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 211 KI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + TD + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 AP--SSRRTD-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD + ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 52 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 106 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P TD + GT +L P+ + EK+D++S G E L G+
Sbjct: 163 APSSRR--TD-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 13 KGKRTLMIGNGASVL--QELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINN 70
KG+R L G+ V+ ++ I G+ ++ S +++KQ+T+ ES +
Sbjct: 53 KGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDK---------ESLLRE 100
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
V Q+ H +I+KL + LV E G L+D I+ + F + R ++
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII--SRKRFSEVDAARIIRQ 158
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGETHITD 187
+ + + Y+H IV RD K ++L S++ +++ DF LS E + D
Sbjct: 159 VL---SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKD 211
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 212 KI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQT 117
KN ++ + + Q+ H ++++L+G +E + +V EY+ G+L D + ++
Sbjct: 38 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 97
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
L LK ++D A+ YL V RD ++L SE+NV K+ DF L+
Sbjct: 98 VLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-- 149
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ + DT AP+ + FS K DV+SFG L E+ + GR
Sbjct: 150 --KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
+ H ++LK IG + + EY++ GTL I+ + + + +R+ A D A+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYP---WSQRVSFAKDIAS 119
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS------ISIPEGETHITD--- 187
+AYLH I+ RD + + L E V + DF L+ + PEG +
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 188 ----TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL 223
TV+G +AP+ + + EK+DV+SFG L E++
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + ++ H+ +++L E PI I V EY+ G+L D + G + L L
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKY---LRL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + A A+ +AY+ V RD ++IL E V K+ DF L+ I + E
Sbjct: 114 PQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDLVRD 234
AP+ F+ K DV+SFG L+EL T R +LD V
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 235 AHDLVYP 241
+ + P
Sbjct: 231 GYRMPCP 237
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 48 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 101
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S
Sbjct: 102 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCH 158
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 159 APSSR---RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + TD + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 AP--SSRRTD-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 48 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 101
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 102 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 158
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + TD + GT +L P+ + EK+D++S G E L G+
Sbjct: 159 AP--SSRRTD-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 49 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 102
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ +F S+
Sbjct: 103 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVH 159
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 160 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 53 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 108 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 151
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 152 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
Query: 235 A 235
+
Sbjct: 212 S 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQT 117
KN ++ + + Q+ H ++++L+G +E + +V EY+ G+L D + ++
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
L LK ++D A+ YL V RD ++L SE+NV K+ DF L+
Sbjct: 285 VLGGDCL---LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-- 336
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ + DT AP+ + FS K DV+SFG L E+ + GR
Sbjct: 337 --KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLETPIAIL--VFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ H+HI+K GCC + L V EYV G+L D + P+ + L + L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 126
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-----TDTV 189
+AYLH + + R+ ++L + +VK+ DF L+ ++PEG + D+
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ Y AP+ + F DV+SFG L ELLT
Sbjct: 184 VFWY---APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLETPIAIL--VFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ H+HI+K GCC + L V EYV G+L D + P+ + L + L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PR---HSIGLAQLLLFAQQI 126
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT-----DTV 189
+AYLH + + R+ ++L + +VK+ DF L+ ++PEG + D+
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ Y AP+ + F DV+SFG L ELLT
Sbjct: 184 VFWY---APECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 106
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ +F S+
Sbjct: 107 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P T+ GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 49 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 102
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 103 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 159
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 160 APSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 63 WHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL 122
+HE N ++ + H +I+KL + LV E+ + G L+++I+
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--------- 139
Query: 123 LLKRRLKDAVDAAN-------ALAYLHFGFPRPIVFRDFKTSHILFSEENV---VKLFDF 172
R D DAAN + YLH IV RD K +IL +N +K+ DF
Sbjct: 140 ---RHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 173 SLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
LS S + + D +GT ++AP+ V ++EK DV+S G + LL G
Sbjct: 194 GLS-SFFSKDYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY G ++ +
Sbjct: 52 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----Q 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 106 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 162
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 163 APSSR---RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
RI++ + +K+E N D ++ W ++ + +H ++ L C V EY
Sbjct: 46 RIYAMKVVKKELVN-DDEDIDWVQT--EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 102
Query: 102 VQHGTLW---DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSH 158
V G L R P+ H R A + + AL YLH R I++RD K +
Sbjct: 103 VNGGDLMFHMQRQRKLPEEH-------ARFYSA-EISLALNYLH---ERGIIYRDLKLDN 151
Query: 159 ILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGA 217
+L E +KL D+ + + G+T T GT ++AP+ + D+ +D ++ G
Sbjct: 152 VLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 218 FLSELLTGRGILDLV 232
+ E++ GR D+V
Sbjct: 210 LMFEMMAGRSPFDIV 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
RI++ + +K+E N D ++ W ++ + +H ++ L C V EY
Sbjct: 31 RIYAMKVVKKELVN-DDEDIDWVQT--EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 87
Query: 102 VQHGTLW---DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSH 158
V G L R P+ H R A + + AL YLH R I++RD K +
Sbjct: 88 VNGGDLMFHMQRQRKLPEEH-------ARFYSA-EISLALNYLH---ERGIIYRDLKLDN 136
Query: 159 ILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGA 217
+L E +KL D+ + + G+T T GT ++AP+ + D+ +D ++ G
Sbjct: 137 VLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 218 FLSELLTGRGILDLV 232
+ E++ GR D+V
Sbjct: 195 LMFEMMAGRSPFDIV 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E CIN + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 50 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 106
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 107 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 160
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 161 APSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 15 KRTLMIGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTY 73
KR ++G+GA + + I G+ + +I A ++ ET F E+ I
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETV--KIPVAIKILNETTGPKANVEFMDEALI----- 70
Query: 74 AAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVD 133
A M H H+++L+G CL +P LV + + HG L + + H + + + L V
Sbjct: 71 MASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQ 125
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
A + YL R +V RD ++L N VK+ DF L+ + EG+ + G
Sbjct: 126 IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKM 181
Query: 194 --GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + F+ + DV+S+G + EL+T G
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----Q 100
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
+R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 101 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ V + + H +IL+L G + L+ EY GT++ + +
Sbjct: 47 EKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLS 103
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + ANAL+Y H + ++ RD K ++L +K+ DF S+
Sbjct: 104 KFDE---QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 157
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
P + GT +L P+ + EK+D++S G E L G+
Sbjct: 158 APSSR---RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
RI++ + +K+E N D ++ W ++ + +H ++ L C V EY
Sbjct: 35 RIYAMKVVKKELVN-DDEDIDWVQT--EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 91
Query: 102 VQHGTLW---DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSH 158
V G L R P+ H R A + + AL YLH R I++RD K +
Sbjct: 92 VNGGDLMFHMQRQRKLPEEH-------ARFYSA-EISLALNYLH---ERGIIYRDLKLDN 140
Query: 159 ILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGA 217
+L E +KL D+ + + G+T T GT ++AP+ + D+ +D ++ G
Sbjct: 141 VLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 218 FLSELLTGRGILDLV 232
+ E++ GR D+V
Sbjct: 199 LMFEMMAGRSPFDIV 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
ES + ++ HD +++L E PI I V EY+ G+L D + L L
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDG---EGRALKL 104
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ A A +AY+ + RD ++++IL + K+ DF L+ I + E
Sbjct: 105 PNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXT 161
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
AP+ F+ K DV+SFG L+EL+T GR
Sbjct: 162 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 15 KRTLMIGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTY 73
KR ++G+GA + + I G+ + +I A ++ ET F E+ I
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETV--KIPVAIKILNETTGPKANVEFMDEALI----- 93
Query: 74 AAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVD 133
A M H H+++L+G CL +P LV + + HG L + + H + + + L V
Sbjct: 94 MASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYV----HEHKDNIGSQLLLNWCVQ 148
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
A + YL R +V RD ++L N VK+ DF L+ + EG+ + G
Sbjct: 149 IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKM 204
Query: 194 --GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + F+ + DV+S+G + EL+T G
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 240
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + + HD ++KL + PI I+ E++ G+L D L + + +PL
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL-- 110
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + + A +A++ R + RD + ++IL S V K+ DF L+ I + E
Sbjct: 111 PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 167
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ AP+ + F+ K DV+SFG L E++T GR
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 135
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L+ +H +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 73 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 127
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L+ +H +
Sbjct: 128 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 8/163 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + + HD ++KL + PI I+ E++ G+L D L + + +PL
Sbjct: 228 EAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL-- 283
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + + A +A++ R + RD + ++IL S V K+ DF L+ I + E
Sbjct: 284 PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
+ AP+ + F+ K DV+SFG L E++T GR
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 80 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 134
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 135 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 81 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 135
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 65 ESCINN-VTYAAQMSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAP-QTHFEP 121
ES I N + ++ H++I+ L E+P + LV + V G L+DRI+ T +
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDI-YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA 122
Query: 122 LLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISI 178
L R++ DAV YLH IV RD K ++L+ EE+ + + DF LS
Sbjct: 123 STLIRQVLDAV------YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM- 172
Query: 179 PEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
EG+ + T GT G++AP+ + +S+ +D +S G LL G
Sbjct: 173 -EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 107
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPE-GETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L+ +H +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 107
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 55 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 109
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 110 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 112
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E+ + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 110 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 153
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 154 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
Query: 235 A 235
+
Sbjct: 214 S 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T FE + L +
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 112
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 77 MSHDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+ HD+I+K G C L+ E++ +G+L + + Q H E + + L+
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL----QKHKERIDHIKLLQYTSQI 126
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE--THITDTVMGT 192
+ YL G R + RD T +IL EN VK+ DF L+ +P+ + + +
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ +T FS DV+SFG L EL T
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E+ + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI---LGAP----QT 117
E+ + ++H++++K G E I L EY G L+DRI +G P Q
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F L+ + YLH G I RD K ++L E + +K+ DF L+
Sbjct: 109 FFHQLMA------------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLAT 152
Query: 177 SIP-EGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSELLTGRGILDLVRD 234
+ + + GT ++AP+ + +F +E +DV+S G L+ +L G D D
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
Query: 235 A 235
+
Sbjct: 213 S 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G +AI V ++ + +L+ L +T FE + L +
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHH-LHIIETKFEMIKL---I 107
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E+ VK+ DF L ++ +H +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTGR 226
+ G+ +AP+ + D +S + DVY+FG L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 119 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 171
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 13 KGKRTLMIGNGASVL--QELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINN 70
KG+R L G+ V+ ++ I G+ ++ S +++KQ+T+ ES +
Sbjct: 29 KGQRVLGKGSFGEVILCKDKIT---GQECAVKVISKRQVKQKTDK---------ESLLRE 76
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
V Q+ H +I KL + LV E G L+D I+ R+
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS------------RKRFS 124
Query: 131 AVDAA----NALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGET 183
VDAA L+ + + IV RD K ++L S++ +++ DF LS E
Sbjct: 125 EVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 183
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
D + GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 184 KXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P +V EY+ +G L D + + ++L
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E +VVK+ DF LS + G+T+
Sbjct: 133 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTY 185
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 186 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 115 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 167
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 168 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 116 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 168
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 127 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 179
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 180 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
IV+RD K +IL + +++ D L++ +PEG+T +GT G++AP+ V ++
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTF 364
Query: 209 KLDVYSFGAFLSELLTGR 226
D ++ G L E++ G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 116 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 168
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 169 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 119 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 171
Query: 185 ITDTVMG-TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 116 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 168
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 119 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 171
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 114 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 166
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 61 GFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL--GAPQTH 118
F S N + ++ H++I+ L T LV + V G L+DRIL G
Sbjct: 47 AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 106
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLS 175
L++++ L +A+ YLH IV RD K ++L+ E + + + DF LS
Sbjct: 107 DASLVIQQVL-------SAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Query: 176 ISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
G I T GT G++AP+ + +S+ +D +S G LL G
Sbjct: 157 KMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
IV+RD K +IL + +++ D L++ +PEG+T +GT G++AP+ V ++
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTF 364
Query: 209 KLDVYSFGAFLSELLTGR 226
D ++ G L E++ G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 118 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 170
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ + Q+ H++++ L+ C + LVFE+V H L D L ++ ++++
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQ--VVQKY 129
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L + N + + H I+ RD K +IL S+ VVKL DF + ++ + D
Sbjct: 130 LFQII---NGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYD 182
Query: 188 TVMGTYGHLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTG 225
+ T + AP+ V + + +DV++ G ++E+ G
Sbjct: 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T+
Sbjct: 119 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 171
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS
Sbjct: 115 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLM 162
Query: 185 ITDTVMGTYGH------LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
DT G AP+ + FS K DV++FG L E+ T
Sbjct: 163 TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 46/184 (25%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT----- 186
+ A A+ +LH + ++ RD K S+I F+ ++VVK+ DF L ++ + E T
Sbjct: 171 IQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 187 ------DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL----TGRGILDLVRDAH 236
+GT +++P+ + ++S K+D++S G L ELL T + ++ D
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR 287
Query: 237 DLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
+L +P L T+K Q H Q + L+ SP +RP
Sbjct: 288 NLKFP-------------------------LLFTQKYPQEHMMVQ---DMLSPSPTERPE 319
Query: 297 MVDV 300
D+
Sbjct: 320 ATDI 323
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T
Sbjct: 112 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTX 164
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKRR 127
H +I+ L+G C + ++ EY G L + + P F E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDX 205
Query: 188 TVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDLV 232
T G L AP+ + ++ + DV+SFG L E+ T G + L+
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 265
Query: 233 RDAHDLVYPFN 243
++ H + P N
Sbjct: 266 KEGHRMDKPSN 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS
Sbjct: 112 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLM 159
Query: 185 ITDTVMGTYGH------LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
DT G AP+ + FS K DV++FG L E+ T
Sbjct: 160 TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 18/166 (10%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS
Sbjct: 112 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS------RLM 159
Query: 185 ITDTVMGTYGH------LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
DT G AP+ + FS K DV++FG L E+ T
Sbjct: 160 TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + RD + L E ++VK+ DF LS + G+T
Sbjct: 119 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTX 171
Query: 185 ITDT-VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 144
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 145 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 144
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 145 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 121
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 77 MSHDHILKLIGCCL-ETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
+ HD +++L E PI I+ EY+ G+L D + +LL + + + A
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIIT-EYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIA 120
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AY+ + + RD + +++L SE + K+ DF L+ I + E +
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + F+ K DV+SFG L E++T
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 139
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 140 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 136
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 137 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 121
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 143
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 144 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 233
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 35/225 (15%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G +A++V EY+++G+L D L
Sbjct: 93 QRRDFLSEASI-----MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDG 146
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ L + V RD ++L V K+ DF LS
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 178 IPEGETHITDTVMGTYG--HLAPQYVTTCDFSEKLDVYSFGAFLSELL----------TG 225
+ + T G AP+ + FS DV+SFG + E+L T
Sbjct: 201 LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 226 RGILDLVRDAHDLVYP-----------FNEYLKNYFEDNRFTEIV 259
R ++ V + + L P + + K+ + RF++IV
Sbjct: 261 RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 72 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 106 TLWDRILGAPQTHFE-----PLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHIL 160
L + + + + PL L+ L + A +A+L + + RD ++L
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 184
Query: 161 FSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFL 219
+ +V K+ DF L+ I +I +AP+ + C ++ + DV+S+G L
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 220 SELLT-----GRGIL------DLVRDAHDLVYP 241
E+ + GIL LV+D + + P
Sbjct: 245 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 277
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 118
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 119 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 175
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 72 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 126
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 127 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 183
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 163
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 164 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 253
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 80 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 106 TLWDRILGAPQTHFE-----PLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHIL 160
L + + + + PL L+ L + A +A+L + + RD ++L
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 192
Query: 161 FSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFL 219
+ +V K+ DF L+ I +I +AP+ + C ++ + DV+S+G L
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 220 SELLT-----GRGIL------DLVRDAHDLVYP 241
E+ + GIL LV+D + + P
Sbjct: 253 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 285
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 69 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 123
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 124 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V + H +IL +G + +AI V ++ + +L+ L +T F+ L +
Sbjct: 81 NEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKH-LHVQETKFQMFQL---I 135
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITD 187
A A + YLH + I+ RD K+++I E VK+ DF L ++ + +
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 188 TVMGTYGHLAPQYVTTCD---FSEKLDVYSFGAFLSELLTG 225
G+ +AP+ + D FS + DVYS+G L EL+TG
Sbjct: 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 141
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 142 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 162
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 163 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 252
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 142
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E + G
Sbjct: 143 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 232
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 149
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 150 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 206
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 70 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKYSLDLASLILYAYQLS 124
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 125 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 181
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 14/195 (7%)
Query: 32 ASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE 91
+S Y + + QE+ N Q+ E IN + + + +I+ + L
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 92 TPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EY+ G+L D + + + R + AL +LH ++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLH---SNQVIH 139
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISI-PEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
RD K+ +IL + VKL DF I PE T++GT +AP+ VT + K+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 197
Query: 211 DVYSFGAFLSELLTG 225
D++S G E++ G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 143
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGT---Y 193
+ YL + V RD + + E+ VK+ DF L+ + + E G
Sbjct: 144 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+A + + T F+ K DV+SFG L EL+T RG
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 233
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+ L +LH R I++RD K ++L ++ V++ D L++ + G+T T GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGF 355
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+AP+ + ++ +D ++ G L E++ RG
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 35/225 (15%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G +A++V EY+++G+L D L
Sbjct: 93 QRRDFLSEASI-----MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDG 146
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ L + V RD ++L V K+ DF LS
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 178 IPEGETHITDTVMGTYG--HLAPQYVTTCDFSEKLDVYSFGAFLSELL----------TG 225
+ + T G AP+ + FS DV+SFG + E+L T
Sbjct: 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 226 RGILDLVRDAHDLVYP-----------FNEYLKNYFEDNRFTEIV 259
R ++ V + + L P + + K+ + RF++IV
Sbjct: 261 RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+ L +LH R I++RD K ++L ++ V++ D L++ + G+T T GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGF 355
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+AP+ + ++ +D ++ G L E++ RG
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+ L +LH R I++RD K ++L ++ V++ D L++ + G+T T GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGF 355
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+AP+ + ++ +D ++ G L E++ RG
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+ L +LH R I++RD K ++L ++ V++ D L++ + G+T T GT G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGF 355
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+AP+ + ++ +D ++ G L E++ RG
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + R+ + L E ++VK+ DF LS + G+T+
Sbjct: 318 ---LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTY 370
Query: 185 ITDTVMG-TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 371 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)
Query: 56 YDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAP 115
+D + CI + Q++H +++K +E +V E G L I
Sbjct: 68 FDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI---- 123
Query: 116 QTHFEP---LLLKRRL-KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFD 171
HF+ L+ +R + K V +AL ++H R ++ RD K +++ + VVKL D
Sbjct: 124 -KHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGD 179
Query: 172 FSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDL 231
L +T +++GT +++P+ + ++ K D++S G L E+
Sbjct: 180 LGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA------- 231
Query: 232 VRDAHDLVYPFNEYLKNYFEDNRFTEIVD-PIIVQDLSCTEKEQQLHASAQLTFECLNES 290
L PF N + + E D P + D E QL C+N
Sbjct: 232 ------LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR-------QLVNMCINPD 278
Query: 291 PIDRPTMV---DVARRLRQICCS 310
P RP + DVA+R+ S
Sbjct: 279 PEKRPDVTYVYDVAKRMHACTAS 301
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
+T +Q ++ K G L+ ++ EY+ G+ D + P + + R +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+D YLH + RD K +++L SE VKL DF ++ + + + +T
Sbjct: 114 LKGLD------YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNT 163
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +AP+ + + K D++S G EL G
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
+++H I+KL L+ ++++ G L+ R+ + + F +K L +
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL---AEL 135
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
A AL +LH I++RD K +IL EE +KL DF LS + E + GT
Sbjct: 136 ALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVE 191
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
++AP+ V ++ D +SFG + E+LTG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
+++H I+KL L+ ++++ G L+ R+ + + F +K L + A
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL---AELA 137
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
AL +LH I++RD K +IL EE +KL DF LS + E + GT +
Sbjct: 138 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEY 193
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V ++ D +SFG + E+LTG
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 12/194 (6%)
Query: 32 ASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE 91
+S Y + + QE+ N Q+ E IN + + + +I+ + L
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 92 TPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EY+ G+L D + + + R + AL +LH ++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLH---SNQVIH 139
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K+ +IL + VKL DF I ++ ++ V GT +AP+ VT + K+D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 212 VYSFGAFLSELLTG 225
++S G E++ G
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + R+ + L E ++VK+ DF LS + G+T+
Sbjct: 360 ---LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTY 412
Query: 185 ITDTVMG-TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 413 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 46/271 (16%)
Query: 37 KYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI 96
K + Y A+ + D N + C + Y + S + + CL
Sbjct: 42 KRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----F 96
Query: 97 LVFEYVQHGTL--W-DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRD 153
+ E+ GTL W ++ G L L ++ VD Y+H + ++ RD
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD------YIH---SKKLINRD 147
Query: 154 FKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVY 213
K S+I + VK+ DF L S+ GT +++P+ +++ D+ +++D+Y
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--GTLRYMSPEQISSQDYGKEVDLY 205
Query: 214 SFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKE 273
+ G L+ELL D + +++ FT++ D II EK
Sbjct: 206 ALGLILAELL----------HVCDTAFETSKF---------FTDLRDGIISDIFDKKEK- 245
Query: 274 QQLHASAQLTFECLNESPIDRPTMVDVARRL 304
L + L++ P DRP ++ R L
Sbjct: 246 -------TLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 121
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E + ++ H ++++L+G C P ++ E++ +G L D + + ++L
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
L A ++A+ YL + + R+ + L E ++VK+ DF LS + G+T+
Sbjct: 321 ---LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTY 373
Query: 185 ITDTVMG-TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + FS K DV++FG L E+ T
Sbjct: 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 196
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 257 LKEGHRMDKPSN 268
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 204
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 265 LKEGHRMDKPSN 276
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 204
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 265 LKEGHRMDKPSN 276
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 193
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 254 LKEGHRMDKPSN 265
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
+++H I+KL L+ ++++ G L+ R+ + + F +K L + A
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL---AELA 136
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
AL +LH I++RD K +IL EE +KL DF LS + E + GT +
Sbjct: 137 LALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEY 192
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V ++ D +SFG + E+LTG
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 189
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 250 LKEGHRMDKPSN 261
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 121
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + +
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGH 195
AL +LH + I++RD K +I+ + + VKL DF L SI +G +T T GT +
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEY 187
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ + + +D +S GA + ++LTG
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 33/191 (17%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKRR 127
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 246
Query: 188 TVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDLV 232
T G L AP+ + ++ + DV+SFG L E+ T G + L+
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 306
Query: 233 RDAHDLVYPFN 243
++ H + P N
Sbjct: 307 KEGHRMDKPSN 317
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
+T +Q ++ K G L+ ++ EY+ G+ D + P + + R +
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILK 135
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+D YLH + RD K +++L SE VKL DF ++ + + + +T +
Sbjct: 136 GLD------YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNTFV 185
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +AP+ + + K D++S G EL G
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 501
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 197
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 258 LKEGHRMDKPSN 269
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 90 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 135
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 194 GYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 97 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 142
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 201 GYNRAVDCWSLGVILFICLSG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 91 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 136
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 195 GYNRAVDCWSLGVILFICLSG 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG--APQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + + P + E L K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A A + YL + + RD ++L +E+NV+K+ DF L+ I HI
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHID 204
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG L E+ T G + L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 265 LKEGHRMDKPSN 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 77 MSHDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDA 134
+ H HI +L LET I +V EY G L+D I+ + + E ++ R++ AV
Sbjct: 65 LRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY 123
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
++ Y H RD K ++LF E + +KL DF L + + T G+
Sbjct: 124 VHSQGYAH---------RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 195 HLAPQYVTTCDF-SEKLDVYSFGAFLSELLTG 225
+ AP+ + + + DV+S G L L+ G
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL-GAPQTHFEPLLLKRRLKDAVDAAN 136
H HI+ LI + LVF+ ++ G L+D + + E + R L +AV
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV---- 213
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
++LH IV RD K +IL + ++L DF S + GE + GT G+L
Sbjct: 214 --SFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYL 266
Query: 197 APQYV------TTCDFSEKLDVYSFGAFLSELLTG 225
AP+ + T + +++D+++ G L LL G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 79 HDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
H++I+K G C E L+ E++ G+L + + P+ + LK++LK AV
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNK-NKINLKQQLKYAVQICK 125
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT--DTVMGTYG 194
+ YL R V RD ++L E+ VK+ DF L+ +I + T D
Sbjct: 126 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + F DV+SFG L ELLT
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
Q H HI+KLIG E P+ I + E G L + Q L L + A +
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 501
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
ALAYL + V RD ++L S + VKL DF LS + + +
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+AP+ + F+ DV+ FG + E+L
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 79 HDHILKLIGCCLETPIA--ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
H++I+K G C E L+ E++ G+L + + P+ + + LK++LK AV
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNK-INLKQQLKYAVQICK 137
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT--DTVMGTYG 194
+ YL R V RD ++L E+ VK+ DF L+ +I + T D
Sbjct: 138 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + F DV+SFG L ELLT
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 108/256 (42%), Gaps = 46/256 (17%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRL-- 128
Q++H H++KL G C + +L+ EY ++G+L R +G L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 129 --KDAVDAANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
+ A+ + +++ + + +V RD +IL +E +K+ DF LS +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 180 EGETHITDTVMGTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTGRGILDLVRD 234
E ++++ + G + +++ ++ + DV+SFG L E++T G +
Sbjct: 202 EEDSYVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG------N 251
Query: 235 AHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDR 294
+ + P E L N + E D +C+E+ +L +C + P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPD-------NCSEE------MYRLMLQCWKQEPDKR 296
Query: 295 PTMVDVARRLRQICCS 310
P D+++ L ++
Sbjct: 297 PVFADISKDLEKMMVK 312
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 145
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 146 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF---DSVHNKTGAK 199
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 144
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 145 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 198
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 35/237 (14%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E V A M H +I++ E +V +Y + G L+ RI F+
Sbjct: 67 REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ L V AL ++H R I+ RD K+ +I +++ V+L DF ++ +
Sbjct: 127 I---LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIA-RVLNSTV 179
Query: 184 HITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+ +GT +L+P+ ++ K D+++ G L EL T
Sbjct: 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT------------------- 220
Query: 244 EYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHAS---AQLTFECLNESPIDRPTM 297
LK+ FE +V II S + LH S L + +P DRP++
Sbjct: 221 --LKHAFEAGSMKNLVLKII----SGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSV 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 145
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 146 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 199
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 235
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 142
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 143 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 196
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 232
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 32 ASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE 91
+S Y + + QE+ N Q+ E IN + + + +I+ + L
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 92 TPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EY+ G+L D + + + R + AL +LH ++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLH---SNQVIH 139
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K+ +IL + VKL DF I ++ + V GT +AP+ VT + K+D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 212 VYSFGAFLSELLTG 225
++S G E++ G
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 32/170 (18%)
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
+ Y+H + ++ RD K S+I + VK+ DF L S+ GT
Sbjct: 146 TKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK--GTLR 200
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNR 254
+++P+ +++ D+ +++D+Y+ G L+ELL D + +++
Sbjct: 201 YMSPEQISSQDYGKEVDLYALGLILAELLH----------VCDTAFETSKF--------- 241
Query: 255 FTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVARRL 304
FT++ D II EK L + L++ P DRP ++ R L
Sbjct: 242 FTDLRDGIISDIFDKKEK--------TLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 144
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 145 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 198
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 32 ASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE 91
+S Y + + QE+ N Q+ E IN + + + +I+ + L
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 92 TPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EY+ G+L D + + + R + AL +LH ++
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLH---SNQVIH 140
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K+ +IL + VKL DF I ++ + V GT +AP+ VT + K+D
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 212 VYSFGAFLSELLTG 225
++S G E++ G
Sbjct: 200 IWSLGIMAIEMIEG 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 230 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 275
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 334 GYNRAVDCWSLGVILFICLSG 354
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 203
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 204 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 257
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 293
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 14/195 (7%)
Query: 32 ASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE 91
+S Y + + QE+ N Q+ E IN + + + +I+ + L
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 92 TPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EY+ G+L D + + + R + AL +LH ++
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLH---SNQVIH 140
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISI-PEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
R+ K+ +IL + VKL DF I PE T++GT +AP+ VT + K+
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKV 198
Query: 211 DVYSFGAFLSELLTG 225
D++S G E++ G
Sbjct: 199 DIWSLGIMAIEMIEG 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 165
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 78 SHDHILKLIGCCLETPIA-ILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
SH ++L L+G CL + + ++V Y++HG L + I +TH P + K + + A
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETH-NPTV-KDLIGFGLQVAK 149
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
+ +L + V RD + + E+ VK+ DF L+ + + E D+V G
Sbjct: 150 GMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---DSVHNKTGAK 203
Query: 197 AP------QYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
P + + T F+ K DV+SFG L EL+T RG
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RG 239
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIV 150
+V E ++ G L+D+++G +RLK+A A+ YLH I+
Sbjct: 216 IVLELMEGGELFDKVVG-----------NKRLKEATCKLYFYQMLLAVQYLH---ENGII 261
Query: 151 FRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY---VTTC 204
RD K ++L S E+ ++K+ DF S + GET + T+ GT +LAP+ V T
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D +S G L L+G
Sbjct: 320 GYNRAVDCWSLGVILFICLSG 340
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
A ++H ++KL L+ ++++ G L+ R+ + + F +K L +
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL---AEL 139
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
A L +LH I++RD K +IL EE +KL DF LS + E + GT
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVE 195
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
++AP+ V S D +S+G + E+LTG
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T T
Sbjct: 114 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 168
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 88 CCLETPIAIL-VFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVD---AANALAYLHF 143
CC +TP + V E+V G L I + RR +A AA ++ L F
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKS-----------RRFDEARARFYAAEIISALMF 139
Query: 144 GFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVT 202
+ I++RD K ++L E KL DF + I G T T T GT ++AP+ +
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQ 197
Query: 203 TCDFSEKLDVYSFGAFLSELLTG 225
+ +D ++ G L E+L G
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTF 165
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
+T +Q ++ K G L+ ++ EY+ G+ D + P + + R +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+D YLH + RD K +++L SE VKL DF ++ + + + +
Sbjct: 114 LKGLD------YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNX 163
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +AP+ + + K D++S G EL G
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 42/179 (23%)
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT-------- 186
A A+ +LH + ++ RD K S+I F+ ++VVK+ DF L ++ + E T
Sbjct: 128 AEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 187 ---DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
+GT +++P+ + +S K+D++S G L ELL YPF+
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----------------YPFS 228
Query: 244 EYLKNY--FEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDV 300
++ D R + P+ Q C + + L+ SP++RP +++
Sbjct: 229 TQMERVRTLTDVRNLKF-PPLFTQKYPC---------EYVMVQDMLSPSPMERPEAINI 277
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL-------KD 130
H +I+ L+G C + ++ EY G L + + E R+ KD
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 131 AVDAANALAY-LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTV 189
V LA + + + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNIDXXK 214
Query: 190 MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDLVRD 234
T G L AP+ + ++ + DV+SFG + E+ T G + L+++
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 235 AHDLVYPFN 243
H + P N
Sbjct: 275 GHRMDKPAN 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 46/256 (17%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRL-- 128
Q++H H++KL G C + +L+ EY ++G+L R +G L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 129 --KDAVDAANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
+ A+ + +++ + + +V RD +IL +E +K+ DF LS +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 180 EGETHITDTVMGTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTGRGILDLVRD 234
E ++ + + G + +++ ++ + DV+SFG L E++T G +
Sbjct: 202 EEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG------N 251
Query: 235 AHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDR 294
+ + P E L N + E D +C+E+ +L +C + P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPD-------NCSEE------MYRLMLQCWKQEPDKR 296
Query: 295 PTMVDVARRLRQICCS 310
P D+++ L ++
Sbjct: 297 PVFADISKDLEKMMVK 312
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 110
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 111 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR 164
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRL-- 128
Q++H H++KL G C + +L+ EY ++G+L R +G L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 129 --KDAVDAANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
+ A+ + +++ + + +V RD +IL +E +K+ DF LS +
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 180 EGETHITDTVMGTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTGRGILDLVRD 234
E ++ + + G + +++ ++ + DV+SFG L E++T G +
Sbjct: 202 EEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG------N 251
Query: 235 AHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDR 294
+ + P E L N + E D +C+E+ +L +C + P R
Sbjct: 252 PYPGIPP--ERLFNLLKTGHRMERPD-------NCSEE------MYRLMLQCWKQEPDKR 296
Query: 295 PTMVDVARRLRQICC 309
P D+++ L ++
Sbjct: 297 PVFADISKDLEKMMV 311
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
++ H +I++L E LVF+ V G L++ I+ R DA+
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA------------REFYSEADAS 131
Query: 136 N-------ALAYLHFGFPRPIVFRDFKTSHILFSEEN---VVKLFDFSLSISIPEGETHI 185
+ ++AY H IV R+ K ++L + + VKL DF L+I + + E
Sbjct: 132 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW- 187
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + +S+ +D+++ G L LL G
Sbjct: 188 -HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
+T +Q ++ K G L+ ++ EY+ G+ D + P + + R +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
+D YLH + RD K +++L SE VKL DF ++ + + + +
Sbjct: 129 LKGLD------YLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNX 178
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +AP+ + + K D++S G EL G
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
++ H +I++L E LVF+ V G L++ I+ R DA+
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA------------REFYSEADAS 108
Query: 136 N-------ALAYLHFGFPRPIVFRDFKTSHILFSEEN---VVKLFDFSLSISIPEGETHI 185
+ ++AY H IV R+ K ++L + + VKL DF L+I + + E
Sbjct: 109 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-- 163
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + +S+ +D+++ G L LL G
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
++ + QE + N + + H+ + H +I++L E L+F+
Sbjct: 43 KVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 102
Query: 102 VQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL-----AYLHFGFPRPIVFRDFKT 156
V G L++ I+ R DA++ + A LH +V RD K
Sbjct: 103 VTGGELFEDIVA------------REYYSEADASHCIQQILEAVLHC-HQMGVVHRDLKP 149
Query: 157 SHILFSEE---NVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVY 213
++L + + VKL DF L+I + EGE GT G+L+P+ + + + +D++
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 208
Query: 214 SFGAFLSELLTG 225
+ G L LL G
Sbjct: 209 ACGVILYILLVG 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAP-QTHFEPLLLKRR 127
+T +Q +I + G L++ ++ EY+ G+ D + P + + +L+
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREI 125
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
LK L YLH + RD K +++L SE+ VKL DF ++ + + + +
Sbjct: 126 LK-------GLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RN 174
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +AP+ + + K D++S G EL G
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
++ H +I++L E LVF+ V G L++ I+ R DA+
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA------------REFYSEADAS 107
Query: 136 N-------ALAYLHFGFPRPIVFRDFKTSHILFSEEN---VVKLFDFSLSISIPEGETHI 185
+ ++AY H IV R+ K ++L + + VKL DF L+I + + E
Sbjct: 108 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-- 162
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + +S+ +D+++ G L LL G
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGH 195
AL +LH + I++RD K +I+ + + VKL DF L SI +G +T GT +
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEY 187
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ + + +D +S GA + ++LTG
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 76 QMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
++ H +I++L E LVF+ V G L++ I+ R DA+
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA------------REFYSEADAS 108
Query: 136 N-------ALAYLHFGFPRPIVFRDFKTSHILFSEEN---VVKLFDFSLSISIPEGETHI 185
+ ++AY H IV R+ K ++L + + VKL DF L+I + + E
Sbjct: 109 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-- 163
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + +S+ +D+++ G L LL G
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 77 MSHDHILKLIGCCL-ETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
+ HD +++L E PI I+ E++ G+L D + +LL + + + A
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIIT-EFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIA 119
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AY+ + + RD + +++L SE + K+ DF L+ I + E +
Sbjct: 120 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 176
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + F+ K +V+SFG L E++T
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
AA + L F + IV+RD K +IL ++ +K+ DF + G+ T+ GT
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTP 183
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
++AP+ + ++ +D +SFG L E+L G+
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL GF V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLR---GIASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLS- 194
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 65 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 106 TLW-------DRILG---APQTHFE--------PLLLKRRLKDAVDAANALAYLHFGFPR 147
L + +LG AP E PL L+ L + A +A+L +
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SK 177
Query: 148 PIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDF 206
+ RD ++L + +V K+ DF L+ I +I +AP+ + C +
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 207 SEKLDVYSFGAFLSELLT-----GRGIL------DLVRDAHDLVYP 241
+ + DV+S+G L E+ + GIL LV+D + + P
Sbjct: 238 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 125
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 126 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
AA + L F + IV+RD K +IL ++ +K+ DF + G+ T+ GT
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTP 182
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
++AP+ + ++ +D +SFG L E+L G+
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 109
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 110 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 163
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 164 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 110
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 111 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 165 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E N V HD+++ + L +V E+++ G L D + TH +
Sbjct: 87 ELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-----THTR-MNE 140
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
++ + AL+YLH + ++ RD K+ IL + + +KL DF + + E
Sbjct: 141 EQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVP 196
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH + +V+RD K +++ ++ +K+ DF L I +G T T
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTF 312
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 105
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 106 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH + +V+RD K +++ ++ +K+ DF L I +G T T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTF 309
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 30/149 (20%)
Query: 83 LKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLH 142
++L+G C E + G + +RILG K V AL YL
Sbjct: 103 MELMGTCAEK------LKKRMQGPIPERILG---------------KMTVAIVKALYYLK 141
Query: 143 FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYV- 201
++ RD K S+IL E +KL DF +S + + + D G ++AP+ +
Sbjct: 142 E--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERID 197
Query: 202 ----TTCDFSEKLDVYSFGAFLSELLTGR 226
T D+ + DV+S G L EL TG+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 116
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 117 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 171 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEP-----------LLLKRR 127
H +I+ L+G C L EY HG L D + + +P L ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L A D A + YL + + RD +IL E V K+ DF LS G+
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 187
Query: 188 TVMGTYG--HLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
MG +A + + ++ DV+S+G L E+++ G
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEP-----------LLLKRR 127
H +I+ L+G C L EY HG L D + + +P L ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L A D A + YL + + RD +IL E V K+ DF LS G+
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS----RGQEVYVK 197
Query: 188 TVMGTYG--HLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
MG +A + + ++ DV+S+G L E+++ G
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 239
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
I +SH+ +++L G C + ++ EY+ +G L + L + F+ L
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEM 125
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
KD +A L F + RD + L +++ VVK+ DF LS + + E +
Sbjct: 126 CKDVCEAMEYLESKQF------LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
P+ + FS K D+++FG + E+ +
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T
Sbjct: 116 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ ++ H +I+KL +LVFE++ ++L + E + K
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK 103
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L + N +AY H R ++ RD K ++L + E +K+ DF L+ +
Sbjct: 104 SFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
T V+ + + + +S +D++S G +E++ G + V +A L+ F
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF 214
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ ++ H +I+KL +LVFE++ ++L + E + K
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK 103
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L + N +AY H R ++ RD K ++L + E +K+ DF L+ +
Sbjct: 104 SFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
T V+ + + + +S +D++S G +E++ G + V +A L+ F
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LKQ T D E + Q+ + +I++LIG C + +LV E G L
Sbjct: 45 LKQGTEKADT------EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFP----RPIVFRDFKTSHILFSEE 164
++G KR + A L + G + V RD ++L
Sbjct: 98 KFLVG-----------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR 146
Query: 165 NVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
+ K+ DF LS ++ +++ T G + AP+ + FS + DV+S+G + E
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206
Query: 223 LT 224
L+
Sbjct: 207 LS 208
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 20 IGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMS 78
IG GA SV++ + G +I + ++L H+ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD----------HQKLEREARICRLLK 61
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H +I++L E LVF+ V G L++ I+ R DA++ +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA------------REYYSEADASHCI 109
Query: 139 -----AYLHFGFPRPIVFRDFKTSHILFSEE---NVVKLFDFSLSISIPEGETHITDTVM 190
A LH +V RD K ++L + + VKL DF L+I + +G+
Sbjct: 110 QQILEAVLHC-HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFA 167
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + + + +D+++ G L LL G
Sbjct: 168 GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 60 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 113
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 114 QFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 165
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 77 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 130
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 131 QFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 182
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 183 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E+ + + HD ++KL + PI I+ E++ G+L D L + + +PL
Sbjct: 222 EAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL-- 277
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ + + A +A++ R + RD + ++IL S V K+ DF L+ +
Sbjct: 278 PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK 334
Query: 185 ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GR 226
T AP+ + F+ K DV+SFG L E++T GR
Sbjct: 335 WT----------APEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 73 YAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKR----RL 128
YAA + + +K + + + EY ++GTL+D I H E L +R RL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI------HSENLNQQRDEYWRL 121
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-------------- 174
+ AL+Y+H + I+ RD K +I E VK+ DF L
Sbjct: 122 FRQI--LEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVT-TCDFSEKLDVYSFGAFLSELL 223
S ++P ++T + +GT ++A + + T ++EK+D+YS G E++
Sbjct: 177 SQNLPGSSDNLT-SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTV 189
+ +AL YLH R +V+RD K +++ ++ +K+ DF L I +G T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
GT +LAP+ + D+ +D + G + E++ GR
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 19 MIGNG--ASVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHES-CINNVTYAA 75
M+G G SV + + +G ++ + + LK + F E+ C+
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIEEFLREAACMK------ 80
Query: 76 QMSHDHILKLIGCCLET------PIAILVFEYVQHGTLWDRILGAPQTHFEP--LLLKRR 127
+ H H+ KL+G L + PI +++ +++HG L +L A + P L L+
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTL 139
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
++ VD A + YL R + RD + + +E+ V + DF LS I G+ +
Sbjct: 140 VRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY--- 193
Query: 188 TVMGTYGHLAPQYVTTCDFSEKL-----DVYSFGAFLSELLTGRG 227
G L +++ ++ L DV++FG + E++T RG
Sbjct: 194 -RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-RG 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYK 214
Query: 187 DTVMG--TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDLVRD 234
+T G +AP+ + ++ + DV+SFG + E+ T G + L+++
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 235 AHDLVYPFN 243
H + P N
Sbjct: 275 GHRMDKPAN 283
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 148 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 200
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 261 LKEGHRMDKPAN 272
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 194
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 151 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 203
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 264 LKEGHRMDKPAN 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 87 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 140
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 141 QFTVIQLVGMLR---GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 192
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ ++ H +I+KL +LVFE++ ++L + E + K
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK 103
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L + N +AY H R ++ RD K ++L + E +K+ DF L+ +
Sbjct: 104 SFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
T ++ + + + +S +D++S G +E++ G + V +A L+ F
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 146 LVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDI----NNID 198
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 259 LKEGHRMDKPAN 270
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLS-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLS-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLS-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
V EYV G L I PQ F A + + L +LH R I++
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQAVFY----------AAEISIGLFFLH---KRGIIY 143
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM-----GTYGHLAPQYVTTCDF 206
RD K +++ E +K+ DF + + H+ D V GT ++AP+ + +
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 207 SEKLDVYSFGAFLSELLTGRGILD 230
+ +D +++G L E+L G+ D
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 31/254 (12%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLET-----PIAILVFEYVQHGTLWDRILGAP-QTH 118
E ++ SH ++++L+G C+E P +++ ++++G L +L + +T
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
+ + L+ LK VD A + YL R + RD + + ++ V + DF LS I
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
Query: 179 PEGETHITDTVMGT-YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHD 237
G+ + + +A + + ++ K DV++FG + E+ T RG+
Sbjct: 198 YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-RGMTP------- 249
Query: 238 LVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTM 297
YP ++N+ E+ D ++ + E L ++ + C P+DRPT
Sbjct: 250 --YPG---VQNH-------EMYD-YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 298 VDVARRLRQICCSL 311
+ +L ++ SL
Sbjct: 297 SVLRLQLEKLLESL 310
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E N V H++++++ L +V E+++ G L D + TH
Sbjct: 115 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THT---- 165
Query: 124 LKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
R+ + AA AL+ LH + ++ RD K+ IL + + VKL DF
Sbjct: 166 ---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ + E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 220 VSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKT 156
+ E++ G+L D++L + E +L K ++ LAYL I+ RD K
Sbjct: 91 ICMEHMDGGSL-DQVLKEAKRIPEEILGKV----SIAVLRGLAYLRE--KHQIMHRDVKP 143
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFG 216
S+IL + +KL DF +S + + + ++ +GT ++AP+ + +S + D++S G
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 217 AFLSELLTGR 226
L EL GR
Sbjct: 201 LSLVELAVGR 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ + V ++ H +I+KL ++ +V E G L+D I+ + F
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAA 124
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV---VKLFDFSLSISIPEGE 182
R +K + + Y+H IV RD K +IL + +K+ DF LS +
Sbjct: 125 RIIKQVF---SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177
Query: 183 THITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
T + D + GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 178 TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 53 TNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL 112
D + E N V H++++++ L +V E+++ G L D +
Sbjct: 59 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 117
Query: 113 GAPQTHFEPLLLKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENV 166
TH R+ + AA AL+ LH + ++ RD K+ IL + +
Sbjct: 118 ----THT-------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGR 163
Query: 167 VKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
VKL DF + + E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 164 VKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
+ H +I++L E LVF+ V G L++ I+ R DA++
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA------------REYYSEADASH 134
Query: 137 A----LAYLHFGFPRPIVFRDFKTSHILFSEE---NVVKLFDFSLSISIPEGETHITDTV 189
L ++ IV RD K ++L + + VKL DF L+I + +GE
Sbjct: 135 CIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGF 193
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT G+L+P+ + + + +D+++ G L LL G
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 205 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 257
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 318 LKEGHRMDKPAN 329
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 53 TNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL 112
D + E N V H++++++ L +V E+++ G L D +
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 119
Query: 113 GAPQTHFEPLLLKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENV 166
TH R+ + AA AL+ LH + ++ RD K+ IL + +
Sbjct: 120 ----THT-------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGR 165
Query: 167 VKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
VKL DF + + E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 166 VKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 64 HESCINNVTYAAQM-SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL 122
E+ ++ + Q+ SH++I+ L+G C + L+FEY +G L + + + E
Sbjct: 92 REALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 123 LL---KRRLKD---------------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEE 164
+ ++RL++ A A + +L F + V RD ++L +
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHG 208
Query: 165 NVVKLFDFSLSISIPEGETHIT-DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL 223
VVK+ DF L+ I ++ +AP+ + ++ K DV+S+G L E+
Sbjct: 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Query: 224 T 224
+
Sbjct: 269 S 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E
Sbjct: 121 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-- 175
Query: 183 THITDTV-MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
TD G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 176 ---TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L D + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RT 159
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ + V ++ H +I+KL ++ +V E G L+D I+ + F
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAA 124
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV---VKLFDFSLSISIPEGE 182
R +K + + Y+H IV RD K +IL + +K+ DF LS +
Sbjct: 125 RIIKQVF---SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177
Query: 183 THITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
T + D + GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 178 TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E N V H++++++ L +V E+++ G L D + TH
Sbjct: 192 RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THT---- 242
Query: 124 LKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
R+ + AA AL+ LH + ++ RD K+ IL + + VKL DF
Sbjct: 243 ---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 296
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 297 V-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 53 TNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL 112
D + E N V H++++++ L +V E+++ G L D +
Sbjct: 50 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 108
Query: 113 GAPQTHFEPLLLKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENV 166
TH R+ + AA AL+ LH + ++ RD K+ IL + +
Sbjct: 109 ----TH-------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGR 154
Query: 167 VKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
VKL DF + + E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 155 VKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 19 MIGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQM 77
+IG GA SV++ I G+ +I + + G E + +
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIV-------DVAKFTSSPGLSTEDLKREASICHML 83
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF--EPLLLKRRLKDAVDAA 135
H HI++L+ + +VFE++ L I+ F + ++ ++A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA- 142
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF-SEENV--VKLFDFSLSISIPEGETHITDTVMGT 192
L Y H I+ RD K ++L S+EN VKL DF ++I + E + +GT
Sbjct: 143 --LRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL-VAGGRVGT 196
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V + + +DV+ G L LL+G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ + V ++ H +I+KL ++ +V E G L+D I+ + F
Sbjct: 67 TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII--KRKRFSEHDAA 124
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV---VKLFDFSLSISIPEGE 182
R +K + + Y+H IV RD K +IL + +K+ DF LS +
Sbjct: 125 RIIKQVF---SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177
Query: 183 THITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
T + D + GT ++AP+ V + EK DV+S G L LL+G
Sbjct: 178 TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-- 184
Query: 183 THITDTV-MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
TD G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 185 ---TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
+ H +I+K+ + +V E + G L +RI+ A Q + L + N
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSA-QARGKALSEGYVAELMKQMMN 135
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILF---SEENVVKLFDFSLSISIPEGETHITDTVMGTY 193
ALAY H + +V +D K +ILF S + +K+ DF L+ + + + H T+ GT
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHSTNAA-GTA 190
Query: 194 GHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
++AP+ V D + K D++S G + LLTG
Sbjct: 191 LYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 97 LVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
V +Y+ G L+ +R P+ F A + A+AL YLH IV+
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARFY----------AAEIASALGYLH---SLNIVY 162
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K +IL + + L DF L E + T T GT +LAP+ + + +D
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 212 VYSFGAFLSELLTG 225
+ GA L E+L G
Sbjct: 222 WWCLGAVLYEMLYG 235
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 53 TNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRIL 112
D + E N V H++++++ L +V E+++ G L D +
Sbjct: 54 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 112
Query: 113 GAPQTHFEPLLLKRRLKDAVDAA------NALAYLHFGFPRPIVFRDFKTSHILFSEENV 166
TH R+ + AA AL+ LH + ++ RD K+ IL + +
Sbjct: 113 ----TH-------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGR 158
Query: 167 VKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
VKL DF + + E ++GT +AP+ ++ + ++D++S G + E++ G
Sbjct: 159 VKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF---EPLLLKRRLKDAVDA 134
H +I+KL + LV E + G L++RI + HF E + R+L AV
Sbjct: 64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSH 121
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEEN---VVKLFDFSLSISIPEGETHITDTVMG 191
+ + +H RD K ++LF++EN +K+ DF + P + T
Sbjct: 122 MHDVGVVH---------RDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF 171
Query: 192 TYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
T + AP+ + + E D++S G L +L+G+
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G DT G+ + AP+ + ++DV+S G L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G DT G+ + AP+ + ++DV+S G L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD + +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 137 ALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDT 188
+ Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEP-----------LLLKRR 127
H +I+ L+G C L EY HG L D + + +P L ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
L A D A + YL + + R+ +IL E V K+ DF LS G+
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS----RGQEVYVK 194
Query: 188 TVMGT--YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
MG +A + + ++ DV+S+G L E+++ G
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 236
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ EY G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+++ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 127 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 184 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 180 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 186 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 120 EPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
EP+ ++ + + A + +L R + RD +IL SE NVVK+ DF L+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 180 EGETHIT--DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT-GRGILDLVRDAH 236
+ ++ DT + +AP+ + +S K DV+S+G L E+ + G V+
Sbjct: 251 KNPDYVRKGDTRL-PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 237 DLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
D E ++ R E P I Q+ +C + P +RP
Sbjct: 310 DFCSRLREGMR-----MRAPEYSTPEIY----------------QIMLDCWHRDPKERPR 348
Query: 297 MVDVARRL 304
++ +L
Sbjct: 349 FAELVEKL 356
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF L+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLA-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G DT G+ + AP+ + ++DV+S G L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 130 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 187 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 129 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 186 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
K H ++Y + H HI+KL ++V EY G L+D I+ +
Sbjct: 48 KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMT 106
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
+ RR + A + H IV RD K ++L + VK+ DF LS +
Sbjct: 107 EDE---GRRFFQQIICAIEYCHRH-----KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
Query: 179 PEGETHITDTVMGTYGHLAPQYVTTCDFS-EKLDVYSFGAFLSELLTGR 226
+G + T G+ + AP+ + ++ ++DV+S G L +L GR
Sbjct: 159 TDG--NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 158 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 215 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
AL YL + I+ RD K +IL E V + DF+++ +P ET IT T+ GT ++
Sbjct: 127 ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQIT-TMAGTKPYM 181
Query: 197 APQYVTT---CDFSEKLDVYSFGAFLSELLTGR 226
AP+ ++ +S +D +S G ELL GR
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
E N V H +++++ L ++ E++Q G L D + + L
Sbjct: 86 RELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-------SQVRL 138
Query: 124 LKRRLKDAVDAA-NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
+ ++ +A ALAYLH + ++ RD K+ IL + + VKL DF I + +
Sbjct: 139 NEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-D 194
Query: 183 THITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
++GT +AP+ ++ ++ ++D++S G + E++ G
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFE---P 121
+ I ++ Q H++K G + +V EY G++ D I +T E
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 122 LLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEG 181
+L+ LK L YLHF + RD K +IL + E KL DF ++ + +
Sbjct: 129 TILQSTLK-------GLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDX 178
Query: 182 ETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGR 226
+ V+GT +AP+ + ++ D++S G E+ G+
Sbjct: 179 MAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V EY+++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLG-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 193 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
H +++ L+G C + P+ ++V E+ + G L L + + F P K KD + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPY--KDLYKDFLTLEH 145
Query: 137 ALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDT 188
+ Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ + + + H +IL++ + L+ E+ G L+ + Q
Sbjct: 54 EKEGVEHQ-LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QK 108
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
H +R + A+AL Y H R ++ RD K ++L + +K+ DF S+
Sbjct: 109 HGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVH 164
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
P + GT +L P+ + EK+D++ G E L G D
Sbjct: 165 APSLRRR---XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AL YLH I+ RD K +ILF+ + +KL DF +S D+ +GT
Sbjct: 119 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYW 175
Query: 196 LAPQYVTTCDFSE------KLDVYSFGAFLSEL 222
+AP+ V C+ S+ K DV+S G L E+
Sbjct: 176 MAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAAN 136
H +++ L+G C + P+ ++V E+ + G L L + + F P K KD + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPY--KDLYKDFLTLEH 145
Query: 137 ALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDT 188
+ Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ + + + H +IL++ + L+ E+ G L+ + Q
Sbjct: 53 EKEGVEHQ-LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QK 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
H +R + A+AL Y H R ++ RD K ++L + +K+ DF S+
Sbjct: 108 HGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
P + GT +L P+ + EK+D++ G E L G D
Sbjct: 164 APSLRRR---XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E
Sbjct: 125 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-- 179
Query: 183 THITDTV-MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGR 226
TD G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 180 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 227 GILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 237 QVLKFVMDGGYLDQPDN 253
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 97 LVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
V EY G L+ +R+ + F + +AL YLH + +V+
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRARFY----------GAEIVSALDYLHS--EKNVVY 133
Query: 152 RDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
RD K +++ ++ +K+ DF L I +G T GT +LAP+ + D+ +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 211 DVYSFGAFLSELLTGR 226
D + G + E++ GR
Sbjct: 192 DWWGLGVVMYEMMCGR 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 77 MSHDHILKLI-----GCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
M H+++L+ I G LE + L+ + G+L D + G T E + A
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGNIITWNELCHV------A 118
Query: 132 VDAANALAYLHFGFP-------RP-IVFRDFKTSHILFSEENVVKLFDFSLSISI----P 179
+ L+YLH P +P I RDFK+ ++L + L DF L++ P
Sbjct: 119 ETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP 178
Query: 180 EGETHITDTVMGTYGHLAPQYVTTC-----DFSEKLDVYSFGAFLSELLTGRGILDLVRD 234
G+TH +GT ++AP+ + D ++D+Y+ G L EL++ D D
Sbjct: 179 PGDTH---GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
Query: 235 AHDLVYPFNEYLKNYFEDNRFTEIV 259
+ L PF E + + E+V
Sbjct: 236 EYML--PFEEEIGQHPSLEELQEVV 258
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 97 LVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
V EY G L+ +R+ + F + +AL YLH + +V+
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRARFY----------GAEIVSALDYLHS--EKNVVY 132
Query: 152 RDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
RD K +++ ++ +K+ DF L I +G T GT +LAP+ + D+ +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAV 190
Query: 211 DVYSFGAFLSELLTGR 226
D + G + E++ GR
Sbjct: 191 DWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 97 LVFEYVQHGTLW-----DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
V EY G L+ +R+ + F + +AL YLH + +V+
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRARFY----------GAEIVSALDYLHS--EKNVVY 134
Query: 152 RDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
RD K +++ ++ +K+ DF L I +G T GT +LAP+ + D+ +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAV 192
Query: 211 DVYSFGAFLSELLTGR 226
D + G + E++ GR
Sbjct: 193 DWWGLGVVMYEMMCGR 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 30/219 (13%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 80 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 106 TLWD--RILGAPQTHF---------EPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDF 154
L + R P + E L + L + A +A+L + + RD
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDV 192
Query: 155 KTSHILFSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDFSEKLDVY 213
++L + +V K+ DF L+ I +I +AP+ + C ++ + DV+
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 252
Query: 214 SFGAFLSELLT-----GRGIL------DLVRDAHDLVYP 241
S+G L E+ + GIL LV+D + + P
Sbjct: 253 SYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 291
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 22/192 (11%)
Query: 42 RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEY 101
++ + QE N + + H+ + H +I++L E L+F+
Sbjct: 32 KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91
Query: 102 VQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL-----AYLHFGFPRPIVFRDFKT 156
V G L++ I+ R DA++ + A LH +V R+ K
Sbjct: 92 VTGGELFEDIVA------------REYYSEADASHCIQQILEAVLHC-HQMGVVHRNLKP 138
Query: 157 SHILFSEE---NVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVY 213
++L + + VKL DF L+I + EGE GT G+L+P+ + + + +D++
Sbjct: 139 ENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 214 SFGAFLSELLTG 225
+ G L LL G
Sbjct: 198 ACGVILYILLVG 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 80 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 106 TLWD------RILGA-PQTHFEPLLLKRR--LKDAVDAANALAYLHFGFPRPIVFRDFKT 156
L + R+L P L R L + A +A+L + + RD
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAA 192
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSF 215
++L + +V K+ DF L+ I +I +AP+ + C ++ + DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 216 GAFLSELLT-----GRGIL------DLVRDAHDLVYP 241
G L E+ + GIL LV+D + + P
Sbjct: 253 GILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ + + + H +IL++ + L+ E+ G L+ + Q
Sbjct: 53 EKEGVEHQ-LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QK 107
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
H +R + A+AL Y H R ++ RD K ++L + +K+ DF S+
Sbjct: 108 HGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
P + GT +L P+ + EK+D++ G E L G D
Sbjct: 164 APSLRRR---XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G + +++ E++++G L D L
Sbjct: 60 QRREFLSEASI-----MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDG 113
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ LA + + V RD +IL + V K+ DF LS
Sbjct: 114 QFTVIQLVGMLRGIASGMRYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRF 167
Query: 178 IPEGETHITDT-VMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T+T +G + AP+ + F+ D +S+G + E+++
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIA---ILVFEYVQHGTLWDRILGAPQTHFEP 121
E + ++ H +++KL+ L+ P +VFE V G ++ P +P
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGP----VMEVPT--LKP 133
Query: 122 LLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEG 181
L + D + YLH+ + I+ RD K S++L E+ +K+ DF +S
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 182 ETHITDTVMGTYGHLAPQYVTTCD--FSEK-LDVYSFGAFL 219
+ +++TV GT +AP+ ++ FS K LDV++ G L
Sbjct: 191 DALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-- 182
Query: 183 THITDTV-MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGR 226
TD G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 183 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 227 GILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 240 QVLKFVMDGGYLDQPDN 256
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE+V H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-- 182
Query: 183 THITDTV-MGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGR 226
TD G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 183 ---TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 227 GILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 240 QVLKFVMDGGYLDQPDN 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL LV EY
Sbjct: 29 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 88
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + K R +A+ Y H F IV RD K ++L
Sbjct: 89 SGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 140
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G DT G+ + AP+ + ++DV+S G L
Sbjct: 141 ADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 198
Query: 222 LLTG 225
L++G
Sbjct: 199 LVSG 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H HI+KL +V EYV G L+D I E + +R + + A +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVD-- 125
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAP 198
Y H +V RD K ++L K+ DF LS + +GE T G+ + AP
Sbjct: 126 -YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAP 179
Query: 199 QYVTTCDFS-EKLDVYSFGAFLSELLTG 225
+ ++ ++ ++D++S G L LL G
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 26/199 (13%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I+ L G ++ ++V EY+++G+L D L
Sbjct: 66 QRRDFLGEASI-----MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDG 119
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF LS
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLS-R 172
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSEL----------LT 224
+ E + T G + AP+ + F+ DV+S+G + E+ +T
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 225 GRGILDLVRDAHDLVYPFN 243
+ ++ V + + L P +
Sbjct: 233 NQDVIKAVEEGYRLPSPMD 251
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 33/242 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ + A +S I+ L G E P + E ++ G+L I L R
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 166
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV-VKLFDFSLSISI-PEG--ET 183
L A L YLH R I+ D K ++L S + L DF ++ + P+G ++
Sbjct: 167 LYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 223
Query: 184 HIT-DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
+T D + GT H+AP+ V K+D++S + +L G +P+
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-------------CHPW 270
Query: 243 NEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
+Y + + PI SC +AQ E L + P+ R + +++ R
Sbjct: 271 TQYFRGPL-CLKIASEPPPIREIPPSCAP------LTAQAIQEGLRKEPVHRASAMELRR 323
Query: 303 RL 304
++
Sbjct: 324 KV 325
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 33/242 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ + A +S I+ L G E P + E ++ G+L I L R
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 152
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV-VKLFDFSLSISI-PEG--ET 183
L A L YLH R I+ D K ++L S + L DF ++ + P+G ++
Sbjct: 153 LYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 184 HIT-DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
+T D + GT H+AP+ V K+D++S + +L G +P+
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-------------CHPW 256
Query: 243 NEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
+Y + + PI SC +AQ E L + P+ R + +++ R
Sbjct: 257 TQYFRGPL-CLKIASEPPPIREIPPSCAP------LTAQAIQEGLRKEPVHRASAMELRR 309
Query: 303 RL 304
++
Sbjct: 310 KV 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ Y G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILG-APQTHFEPLL--- 123
+N + + + H+++L+G + +++ E + G L + P+ P+L
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 124 -LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + +E+ VK+ DF ++ I E +
Sbjct: 123 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 180 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 67 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 126
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E +
Sbjct: 127 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGRG 227
+ G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 184 YYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
Query: 228 ILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 240 VLKFVMDGGYLDQPDN 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 33/242 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ + A +S I+ L G E P + E ++ G+L I L R
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRA 168
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV-VKLFDFSLSISI-PEG--ET 183
L A L YLH R I+ D K ++L S + L DF ++ + P+G ++
Sbjct: 169 LYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 184 HIT-DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
+T D + GT H+AP+ V K+D++S + +L G +P+
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-------------CHPW 272
Query: 243 NEYLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
+Y + + PI SC +AQ E L + P+ R + +++ R
Sbjct: 273 TQYFRGPL-CLKIASEPPPIREIPPSCAP------LTAQAIQEGLRKEPVHRASAMELRR 325
Query: 303 RL 304
++
Sbjct: 326 KV 327
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LKQ T D E + Q+ + +I++LIG C + +LV E G L
Sbjct: 371 LKQGTEKADT------EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 423
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFP----RPIVFRDFKTSHILFSEE 164
++G KR + A L + G + V R+ ++L
Sbjct: 424 KFLVG-----------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR 472
Query: 165 NVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
+ K+ DF LS ++ +++ T G + AP+ + FS + DV+S+G + E
Sbjct: 473 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532
Query: 223 LT 224
L+
Sbjct: 533 LS 534
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A + L ++H F +V+RD K ++IL E V++ D L+ + + H + +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 191 GTYGHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTG 225
GT+G++AP+ + + D +S G L +LL G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 32/259 (12%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-RILGAP 115
D+ G E + A++ H +++ L+G + ++F Y HG L + ++ +P
Sbjct: 49 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 108
Query: 116 QTHFEPLLLKRRLKDAVD-------AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+ R +K A++ A A + + +V +D T ++L ++ VK
Sbjct: 109 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 168
Query: 169 LFDFSLSISIPEGETH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+ D L + + + + + +AP+ + FS D++S+G L E+ +
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--- 225
Query: 228 ILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK-EQQLHASAQLTFEC 286
Y Y + + E++ Q L C + ++A L EC
Sbjct: 226 ------------YGLQPYCG--YSNQDVVEMIRN--RQVLPCPDDCPAWVYA---LMIEC 266
Query: 287 LNESPIDRPTMVDVARRLR 305
NE P RP D+ RLR
Sbjct: 267 WNEFPSRRPRFKDIHSRLR 285
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A + L ++H F +V+RD K ++IL E V++ D L+ + + H + +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 191 GTYGHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTG 225
GT+G++AP+ + + D +S G L +LL G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL-KDAVDAA 135
H +++ L+G C + P+ ++V E+ + G L L + + F P L KD +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 136 NALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TD 187
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGRG 227
+ G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 185 YYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 228 ILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 241 VLKFVMDGGYLDQPDN 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGA 114
DQ+ F E + + D I+K G P LV EY+ G L D +
Sbjct: 50 DQQRDFQRE-----IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--- 101
Query: 115 PQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL 174
Q H L R L + + YL R V RD +IL E VK+ DF L
Sbjct: 102 -QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL 157
Query: 175 SISIP--EGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +P + + + AP+ ++ FS + DV+SFG L EL T
Sbjct: 158 AKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
L ++H F +V+RD K ++IL E V++ D L+ + + H + +GT+G++
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 356
Query: 197 APQYVTT-CDFSEKLDVYSFGAFLSELLTG 225
AP+ + + D +S G L +LL G
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
L ++H F +V+RD K ++IL E V++ D L+ + + H + +GT+G++
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYM 357
Query: 197 APQYVTT-CDFSEKLDVYSFGAFLSELLTG 225
AP+ + + D +S G L +LL G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V E +++G+L D L
Sbjct: 60 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDA 113
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 114 QFTVIQLVGMLRGI---ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 165
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + + H+++L+G + +++ E + G L R A P
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 126 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 183 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 107
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 108 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + ++ +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T S+ D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGT 192
AA L F + I++RD K +++ E +K+ DF + +I +G T T GT
Sbjct: 448 AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGT 505
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
++AP+ + + + +D ++FG L E+L G+ +
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 32/259 (12%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-RILGAP 115
D+ G E + A++ H +++ L+G + ++F Y HG L + ++ +P
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 116 QTHFEPLLLKRRLKDAVD-------AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+ R +K A++ A A + + +V +D T ++L ++ VK
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185
Query: 169 LFDFSLSISIPEGETH-ITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
+ D L + + + + + +AP+ + FS D++S+G L E+ +
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--- 242
Query: 228 ILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK-EQQLHASAQLTFEC 286
Y Y + + E++ Q L C + ++A L EC
Sbjct: 243 ------------YGLQPYCG--YSNQDVVEMIRN--RQVLPCPDDCPAWVYA---LMIEC 283
Query: 287 LNESPIDRPTMVDVARRLR 305
NE P RP D+ RLR
Sbjct: 284 WNEFPSRRPRFKDIHSRLR 302
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKT 156
LV EY+ G L D + Q H L R L + + YL R V RD
Sbjct: 103 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 155
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETH--ITDTVMGTYGHLAPQYVTTCDFSEKLDVYS 214
+IL E VK+ DF L+ +P + + + + AP+ ++ FS + DV+S
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 215 FGAFLSELLT 224
FG L EL T
Sbjct: 216 FGVVLYELFT 225
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 159
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGIL 229
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 33/192 (17%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWD--RILGAPQTHF---------EPLLLKR 126
H +I+ L+G C + ++ Y G L + R P + E + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 127 RLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHIT 186
+ A + YL + + RD ++L +E NV+K+ DF L+ I +I
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI----NNID 211
Query: 187 DTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLTGRG----------ILDL 231
T G L AP+ + ++ + DV+SFG + E+ T G + L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VRDAHDLVYPFN 243
+++ H + P N
Sbjct: 272 LKEGHRMDKPAN 283
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKT 156
LV EY+ G L D + Q H L R L + + YL R V RD
Sbjct: 91 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 143
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETH--ITDTVMGTYGHLAPQYVTTCDFSEKLDVYS 214
+IL E VK+ DF L+ +P + + + + AP+ ++ FS + DV+S
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 215 FGAFLSELLT 224
FG L EL T
Sbjct: 204 FGVVLYELFT 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 134 AANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGT 192
AA L F + I++RD K +++ E +K+ DF + +I +G T T GT
Sbjct: 127 AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGT 184
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
++AP+ + + + +D ++FG L E+L G+
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 44 FSAQELKQETNNYDQKNGFWHESCINNVTYAAQMS-HDHILKLIGCCLETPIAILVFEYV 102
FSA+E+++ E+ + V ++S H +I++L LVF+ +
Sbjct: 58 FSAEEVQE-----------LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM 106
Query: 103 QHGTLWDRIL-GAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF 161
+ G L+D + + E + R L + + A + L IV RD K +IL
Sbjct: 107 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---------IVHRDLKPENILL 157
Query: 162 SEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTC------DFSEKLDVYSF 215
++ +KL DF S + GE +V GT +LAP+ + + +++D++S
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215
Query: 216 GAFLSELLTG 225
G + LL G
Sbjct: 216 GVIMYTLLAG 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
Q H +++ L G ++V E++++G L D L F + L L+
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
LA + + V RD +IL + V K+ DF LS I + + T G
Sbjct: 158 MRYLADMGY------VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 195 --HLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + F+ DV+S+G + E+++
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 110
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 111 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 165 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 13/206 (6%)
Query: 23 GASVLQELIASSNGKYIPY--RIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHD 80
G LQ+ I N + + + +E+ + + Q N + V ++H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 81 HILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAY 140
+I+KL LV EY G ++D ++ + + K R +A+ Y
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQY 129
Query: 141 LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQY 200
H + IV RD K ++L + +K+ DF S G DT G+ + AP+
Sbjct: 130 CHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPEL 184
Query: 201 VTTCDF-SEKLDVYSFGAFLSELLTG 225
+ ++DV+S G L L++G
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKT 156
LV EY+ G L D + Q H L R L + + YL R V RD
Sbjct: 90 LVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 142
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETH--ITDTVMGTYGHLAPQYVTTCDFSEKLDVYS 214
+IL E VK+ DF L+ +P + + + + AP+ ++ FS + DV+S
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 215 FGAFLSELLT 224
FG L EL T
Sbjct: 203 FGVVLYELFT 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 78 SHDHILKLIGCCLETPIA----ILVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRL 128
+H +IL+L+ CL A L+ + + GTLW+ I G T + L L +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
++A +A Y H RD K ++IL +E L D S+ + H+ +
Sbjct: 144 CRGLEAIHAKGYAH---------RDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGS 191
Query: 189 VMG-----------TYGHLAPQYVTT---CDFSEKLDVYSFGAFLSELLTGRGILDLVRD 234
T + AP+ + C E+ DV+S G L ++ G G D+V
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 235 AHDLV 239
D V
Sbjct: 252 KGDSV 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + + H+++L+G + +++ E + G L R A P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L + ++ A + A+ +AYL+ V RD + + +E+ VK+ DF ++ I E +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ G G L +P+ + F+ DV+SFG L E+ T
Sbjct: 193 YYRK----GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 55 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 113
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 114 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 168 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 159
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 159
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V E +++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLH-FGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
F + L L+ A+ + YL G+ V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLRGI---ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS- 194
Query: 177 SIPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 158
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 159 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 107
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 108 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 160
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L L L F ++ RD K ++L + E +KL DF L+ +
Sbjct: 107 SYL------FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 THEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 40 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 92
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 93 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 139
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 140 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 199
Query: 221 ELLT 224
E +
Sbjct: 200 EAFS 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 73 YAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKR----RL 128
YAA + + +K + + + EY ++ TL+D I H E L +R RL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI------HSENLNQQRDEYWRL 121
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-------------- 174
+ AL+Y+H + I+ RD K +I E VK+ DF L
Sbjct: 122 FRQI--LEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVT-TCDFSEKLDVYSFGAFLSELL 223
S ++P ++T + +GT ++A + + T ++EK+D+YS G E++
Sbjct: 177 SQNLPGSSDNLT-SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 105
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 106 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 158
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 159 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 108
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 109 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 161
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGIL 229
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 209
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 210 QSDIWSMGLSLVEMAVGR 227
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 110
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 111 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 163
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 164 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 109
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 110 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 162
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 163 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 42 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 94
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 95 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 141
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 142 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 201
Query: 221 ELLT 224
E +
Sbjct: 202 EAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 46 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 98
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 99 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 145
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 146 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 205
Query: 221 ELLT 224
E +
Sbjct: 206 EAFS 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 244
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 245 QSDIWSMGLSLVEMAVGR 262
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 107
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 108 SYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RT 160
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 44 FSAQELKQETNNYDQKNGFWHESCINNVTYAAQMS-HDHILKLIGCCLETPIAILVFEYV 102
FSA+E+++ E+ + V ++S H +I++L LVF+ +
Sbjct: 45 FSAEEVQE-----------LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM 93
Query: 103 QHGTLWDRIL-GAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF 161
+ G L+D + + E + R L + + A + L +H RD K +IL
Sbjct: 94 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH---------RDLKPENILL 144
Query: 162 SEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTC------DFSEKLDVYSF 215
++ +KL DF S + GE V GT +LAP+ + + +++D++S
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 202
Query: 216 GAFLSELLTG 225
G + LL G
Sbjct: 203 GVIMYTLLAG 212
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 109
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 110 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 162
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 163 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 108
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 109 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 161
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 159
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K +++ + VKL DF L+ I +T T +GT +++P+ + ++E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 209 KLDVYSFGAFLSEL 222
K D++S G L EL
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G D G + AP+ + ++DV+S G L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 52 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 104
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 105 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 151
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 152 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 211
Query: 221 ELLT 224
E +
Sbjct: 212 EAFS 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 107
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 108 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 160
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGIL 229
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 161 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ 116
D K F E+ I + H HI+KLIG E P I + E +G L L +
Sbjct: 51 DNKEKFMSEAVI-----MKNLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNK 103
Query: 117 THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
+ L L + ++ A+AYL V RD +IL + VKL DF LS
Sbjct: 104 NSLKVLTL---VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 157
Query: 177 SIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
I + + + ++P+ + F+ DV+ F + E+L+
Sbjct: 158 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 108
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 109 SYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RT 161
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGIL 229
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G D G + AP+ + ++DV+S G L
Sbjct: 148 ADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 201
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 202 QSDIWSMGLSLVEMAVGR 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 60 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 112
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 113 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 159
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 160 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 219
Query: 221 ELLT 224
E +
Sbjct: 220 EAFS 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ 116
D K F E+ I + H HI+KLIG E P I + E +G L L +
Sbjct: 55 DNKEKFMSEAVI-----MKNLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNK 107
Query: 117 THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
+ L L + ++ A+AYL V RD +IL + VKL DF LS
Sbjct: 108 NSLKVLTL---VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 161
Query: 177 SIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
I + + + ++P+ + F+ DV+ F + E+L+
Sbjct: 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E++ +K+ DF L+ H D + G T
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATR 192
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 62 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 114
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 115 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 161
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 162 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 221
Query: 221 ELLT 224
E +
Sbjct: 222 EAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 62 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 114
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 115 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 161
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 162 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 221
Query: 221 ELLT 224
E +
Sbjct: 222 EAFS 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E++ +K+ DF L+ H D + G T
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATR 188
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ 116
D K F E+ I + H HI+KLIG E P I + E +G L L +
Sbjct: 67 DNKEKFMSEAVI-----MKNLDHPHIVKLIGIIEEEPTWI-IMELYPYGEL-GHYLERNK 119
Query: 117 THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSI 176
+ L L + ++ A+AYL V RD +IL + VKL DF LS
Sbjct: 120 NSLKVLTL---VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 173
Query: 177 SIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
I + + + ++P+ + F+ DV+ F + E+L+
Sbjct: 174 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
+K G H+ + A + H +IL+L + L+ EY G L+ + +
Sbjct: 62 EKEGVEHQ-LRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS--C 118
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F+ +R + A+AL Y H + ++ RD K ++L + +K+ DF S+
Sbjct: 119 TFDE---QRTATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVH 172
Query: 178 IPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
P T+ GT +L P+ + +EK+D++ G ELL G
Sbjct: 173 APSLRR---KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL-LL 124
+ I ++ +++H +I+KL+ LVFE+V + + A PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPLI 108
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGE 182
K L LA+ H ++ RD K ++L + E +KL DF L + +P
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R 161
Query: 183 THITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 16/186 (8%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
IF A + + Q+ F E+ I Q H +++ L G ++ +++ E++
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASI-----MGQFDHPNVIHLEGVVTKSTPVMIITEFM 116
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
++G+L D L F + L L+ LA +++ V RD +IL +
Sbjct: 117 ENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY------VHRDLAARNILVN 169
Query: 163 EENVVKLFDFSLSISIPEGETHITDT-VMGTYGHL---APQYVTTCDFSEKLDVYSFGAF 218
V K+ DF LS + + + T T +G + AP+ + F+ DV+S+G
Sbjct: 170 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV 229
Query: 219 LSELLT 224
+ E+++
Sbjct: 230 MWEVMS 235
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV 182
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + T+ GT ++AP+ ++ S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + Q N + V ++H +I+KL LV EY
Sbjct: 36 ILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H F IV RD K ++L
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF---IVHRDLKAENLLLD 147
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G D G+ + AP+ + ++DV+S G L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 205
Query: 222 LLTG 225
L++G
Sbjct: 206 LVSG 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ L D + + T L+K
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK 108
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 109 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 161
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ--THFEPL 122
E N ++ Q+ H ++++L +LV EYV G L+DRI+ T + +
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV--VKLFDFSLSISIPE 180
L +++ + + + + LH D K +IL + +K+ DF L+
Sbjct: 191 LFMKQICEGIRHMHQMYILHL---------DLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 181 GETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
E + GT LAP+ V S D++S G LL+G
Sbjct: 242 REKLKVN--FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + ++ +GT +++P+ + +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHYSV 182
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + T+ GT ++AP+ ++ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 27/196 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V RD + + + + VK+ DF ++ I E
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGRG 227
+ G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 185 YYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 228 ILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 241 VLKFVMDGGYLDQPDN 256
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + T+ GT ++AP+ ++ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ L D + + T L+K
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK 109
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 110 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 162
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 163 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIK 109
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L LA+ H ++ RD K ++L + E +KL DF L + +P T
Sbjct: 110 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT 162
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 163 YXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 44 FSAQELKQETNNYDQKNGFWHESCINNVTYAAQMS-HDHILKLIGCCLETPIAILVFEYV 102
FSA+E+++ E+ + V ++S H +I++L LVF+ +
Sbjct: 58 FSAEEVQE-----------LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM 106
Query: 103 QHGTLWDRIL-GAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF 161
+ G L+D + + E + R L + + A + L IV RD K +IL
Sbjct: 107 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---------IVHRDLKPENILL 157
Query: 162 SEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTC------DFSEKLDVYSF 215
++ +KL DF S + GE V GT +LAP+ + + +++D++S
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215
Query: 216 GAFLSELLTG 225
G + LL G
Sbjct: 216 GVIMYTLLAG 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGVIMGEMIKG-GVL 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 168 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY- 222
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 223 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGVIMGEMIKG-GVL 224
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 153 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 208
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 209 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
AL +LH I++RD K +IL V L DF LS ET GT ++
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 197 APQYVTTCD--FSEKLDVYSFGAFLSELLTG 225
AP V D + +D +S G + ELLTG
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 142 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 197
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 198 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I+ L G + +++ EY+++G+L D L
Sbjct: 58 QRRDFLSEASI-----MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDG 111
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF +S
Sbjct: 112 RFTVIQLVGMLRGIGSGMKYLSDMSY------VHRDLAARNILVNSNLVCKVSDFGMS-R 164
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + AP+ + F+ DV+S+G + E+++
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
H HI+KL +V EYV G L+D I E + +R + + A +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILSAVD-- 125
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAP 198
Y H +V RD K ++L K+ DF LS + +GE + D+ G+ + AP
Sbjct: 126 -YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRDSC-GSPNYAAP 179
Query: 199 QYVTTCDFS-EKLDVYSFGAFLSELLTG 225
+ ++ ++ ++D++S G L LL G
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 146 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY- 200
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 201 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 135 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 191 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 146 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY- 200
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 201 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 76 QMSHDHILKLIGCC-LETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
++SH ++K G C E PI I V EY+ +G L L ++H + L + L+ D
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYI-VTEYISNGCL----LNYLRSHGKGLEPSQLLEMCYDV 113
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
+A+L + RD + L + VK+ DF ++ + + + +
Sbjct: 114 CEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNR 254
AP+ +S K DV++FG + E + L + +DL Y +E + + +R
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWE------VFSLGKMPYDL-YTNSEVVLKVSQGHR 223
Query: 255 FTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
+ P + D Q+ + C +E P RPT
Sbjct: 224 ---LYRPHLASD-----------TIYQIMYSCWHELPEKRPT 251
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I+ L G + +++ EY+++G+L D L
Sbjct: 52 QRRDFLSEASI-----MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDG 105
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + + V RD +IL + V K+ DF +S
Sbjct: 106 RFTVIQLVGMLRGIGSGMKYLSDMSY------VHRDLAARNILVNSNLVCKVSDFGMS-R 158
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + AP+ + F+ DV+S+G + E+++
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATR 197
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+IL + +KL DF +S + + + + +GT +++P+ + +S
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEFVGTRSYMSPERLQGTHYSV 185
Query: 209 KLDVYSFGAFLSELLTGR 226
+ D++S G L E+ GR
Sbjct: 186 QSDIWSMGLSLVEMAVGR 203
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATR 191
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATR 191
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 79 HDHILKLIGCCLETPIAI-LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANA 137
H HI+KL + TP I +V EYV G L+D I + + RRL + +
Sbjct: 75 HPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKE---SRRLFQQILSGVD 130
Query: 138 LAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLA 197
+ H +V RD K ++L K+ DF LS + +GE G+ + A
Sbjct: 131 YCHRHM-----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAA 183
Query: 198 PQYVTTCDFS-EKLDVYSFGAFLSELLTG 225
P+ ++ ++ ++D++S G L LL G
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 138 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 194 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G + +++ E++++G L D L
Sbjct: 58 QRREFLSEASI-----MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDG 111
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ LA + + V RD +IL + V K+ DF LS
Sbjct: 112 QFTVIQLVGMLRGIASGMRYLAEMSY------VHRDLAARNILVNSNLVCKVSDFGLSRF 165
Query: 178 IPEGETHITDTVMGTYGH------LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T T + G AP+ + F+ D +S+G + E+++
Sbjct: 166 LEENSSDPTYT--SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ ++ H +I+ LI LVFE+++ ++L +T + +K
Sbjct: 65 TAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIK 122
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L + +A+ H I+ RD K ++L + + +KL DF L+ +
Sbjct: 123 IYLYQLL---RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
T V+ + + + +S +D++S G +E++TG+ + V D L F+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 46 AQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG 105
A ++ + T + D+K E I +++ Q H++I+ L+G C +++ EY +G
Sbjct: 80 AVKMLKSTAHADEKEALMSELKI--MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 106 TLWD------RILGA-PQTHFEPLLLKRR--LKDAVDAANALAYLHFGFPRPIVFRDFKT 156
L + R+L P R L + A +A+L + + RD
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAA 192
Query: 157 SHILFSEENVVKLFDFSLSISIPEGETHITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSF 215
++L + +V K+ DF L+ I +I +AP+ + C ++ + DV+S+
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
Query: 216 GAFLSELLT-----GRGIL------DLVRDAHDLVYP 241
G L E+ + GIL LV+D + + P
Sbjct: 253 GILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 79 HDHILKLIGCCLETPIAILVF-EYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDAA 135
H +++ L+G C + ++V E+ + G L L + + F P + KD +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 136 NALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TD 187
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 79 HDHILKLIGCCLETPIAILVF-EYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDAA 135
H +++ L+G C + ++V E+ + G L L + + F P + KD +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 136 NALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TD 187
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ ++ H +I+ LI LVFE+++ ++L +T + +K
Sbjct: 65 TAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIK 122
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L + +A+ H I+ RD K ++L + + +KL DF L+ +
Sbjct: 123 IYLYQLL---RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176
Query: 186 TDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFN 243
T V+ + + + +S +D++S G +E++TG+ + V D L F+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 46 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 98
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 99 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 145
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E G + AP+ + FS K DV+SFG +
Sbjct: 146 TQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 205
Query: 221 ELLT 224
E +
Sbjct: 206 EAFS 209
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL L+ EY
Sbjct: 34 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 93
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H + IV RD K ++L
Sbjct: 94 SGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCH---QKRIVHRDLKAENLLLD 145
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G DT G+ + AP+ + ++DV+S G L
Sbjct: 146 ADMNIKIADFGFSNEFTVGGK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 203
Query: 222 LLTG 225
L++G
Sbjct: 204 LVSG 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYVATR 193
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
++ +++ + H HI++L+G C + + LV +Y+ G+L D + + H L
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV----RQHRGALGP 114
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ L V A + YL +V R+ ++L + V++ DF ++ +P +
Sbjct: 115 QLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 185 ITDTVMGT-YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + T +A + + ++ + DV+S+G + EL+T
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 69 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V R+ + + + + VK+ DF ++ I E +
Sbjct: 129 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGRG 227
+ G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 186 YYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 241
Query: 228 ILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 242 VLKFVMDGGYLDQPDN 257
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYVATR 193
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 133 DAANALAYLHFGFPRPIVFRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTV 189
D ++AL YLH I+ RD K +I+ + + K+ D + + +GE +
Sbjct: 130 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEF 184
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +LAP+ + ++ +D +SFG E +TG
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 133 DAANALAYLHFGFPRPIVFRDFKTSHILFS---EENVVKLFDFSLSISIPEGETHITDTV 189
D ++AL YLH I+ RD K +I+ + + K+ D + + +GE +
Sbjct: 129 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEF 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+GT +LAP+ + ++ +D +SFG E +TG
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWD-----RILGAPQTHFEPL 122
+N + + H+++L+G + ++V E + HG L R P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+ ++ A + A+ +AYL+ + V R+ + + + + VK+ DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 183 THITDTVMGTYGHL-----APQYVTTCDFSEKLDVYSFGAFLSEL----------LTGRG 227
+ G G L AP+ + F+ D++SFG L E+ L+
Sbjct: 185 YYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 228 ILDLVRDAHDLVYPFN 243
+L V D L P N
Sbjct: 241 VLKFVMDGGYLDQPDN 256
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E++ +K+ DF L H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGYVATR 193
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
++ +++ + H HI++L+G C + + LV +Y+ G+L D + + H L
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV----RQHRGALGP 132
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETH 184
+ L V A + YL +V R+ ++L + V++ DF ++ +P +
Sbjct: 133 QLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 185 ITDTVMGT-YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ + T +A + + ++ + DV+S+G + EL+T
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 404 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 456
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 457 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 503
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 504 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563
Query: 221 ELLT 224
E +
Sbjct: 564 EAFS 567
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 68 INNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR 127
+ + Q+ H +++ L+ LVFEY H L + L Q L+K
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSI 107
Query: 128 LKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITD 187
+ A N F + RD K +IL ++ +V+KL DF + + G + D
Sbjct: 108 TWQTLQAVN------FCHKHNCIHRDVKPENILITKHSVIKLCDFGFA-RLLTGPSDYYD 160
Query: 188 TVMGTYGHLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTG 225
+ T + +P+ V + +DV++ G +ELL+G
Sbjct: 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E I + A H +I+KL+G Y G LW I P + ++L
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGA------------YYHDGKLWIMIEFCPGGAVDAIML 108
Query: 125 K--RRLKDA---VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
+ R L + V L L+F + I+ RD K ++L + E ++L DF +S
Sbjct: 109 ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168
Query: 180 EGETHITDTVMGTYGHLAPQYVTTCD------FSEKLDVYSFGAFLSEL 222
+ D+ +GT +AP+ V C+ + K D++S G L E+
Sbjct: 169 KT-LQKRDSFIGTPYWMAPE-VVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL-LL 124
+ I ++ +++H +I+KL+ LVFE++ + + A PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLI 106
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGE 182
K L LA+ H ++ RD K ++L + E +KL DF L + +P
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-R 159
Query: 183 THITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 160 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 65 ESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLL 124
E I + A H +I+KL+G Y G LW I P + ++L
Sbjct: 53 EDYIVEIEILATCDHPYIVKLLGA------------YYHDGKLWIMIEFCPGGAVDAIML 100
Query: 125 K--RRLKDA---VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIP 179
+ R L + V L L+F + I+ RD K ++L + E ++L DF +S
Sbjct: 101 ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 160
Query: 180 EGETHITDTVMGTYGHLAPQYVTTCD------FSEKLDVYSFGAFLSEL 222
+ D+ +GT +AP+ V C+ + K D++S G L E+
Sbjct: 161 KT-LQKRDSFIGTPYWMAPE-VVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 206 NVDIWSVGCIMGEMIKG-GVL 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 147 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 202
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 203 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I++L G ++ ++V E +++G+L D L
Sbjct: 89 QRRDFLGEASI-----MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDA 142
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ A+ + YL V RD +IL + V K+ DF LS
Sbjct: 143 QFTVIQLVGMLRGI---ASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLS-R 195
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + +P+ + F+ DV+S+G L E+++
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 28/184 (15%)
Query: 49 LKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLW 108
LK E N+ K+ E+ + Q+ + +I+++IG C E +LV E + G L
Sbjct: 405 LKNEANDPALKDELLAEANV-----MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL- 457
Query: 109 DRILGAPQTHFEPLLLKRRLKDAV------DAANALAYLHFGFPRPIVFRDFKTSHILFS 162
+ L R +KD + + YL V RD ++L
Sbjct: 458 ----------NKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLV 504
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTY--GHLAPQYVTTCDFSEKLDVYSFGAFLS 220
++ K+ DF LS ++ E + G + AP+ + FS K DV+SFG +
Sbjct: 505 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 564
Query: 221 ELLT 224
E +
Sbjct: 565 EAFS 568
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 168 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 222
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 223 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
++Y + H HI+KL I+V EY + L+D I+ + + RR
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQE---ARRFFQ 120
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ +A + H IV RD K ++L E VK+ DF LS + +G + T
Sbjct: 121 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 173
Query: 191 GTYGHLAPQYVTTCDFS-EKLDVYSFGAFLSELLTGR 226
G+ + AP+ ++ ++ ++DV+S G L +L R
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 79 HDHILKLIGCCLETPIAILVF-EYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDAA 135
H +++ L+G C + ++V E+ + G L L + + F P + KD +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 136 NALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TD 187
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 188 TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 38/240 (15%)
Query: 37 KYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLE-TPIA 95
+Y+ +IF Q+ + N Y+ V M H++IL+ IG T +
Sbjct: 48 EYVAVKIFPIQDKQSWQNEYE-------------VYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 96 I---LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFP------ 146
+ L+ + + G+L D L A + L A A LAYLH P
Sbjct: 95 VDLWLITAFHEKGSLSD-FLKANVVSWNELC-----HIAETMARGLAYLHEDIPGLKDGH 148
Query: 147 RP-IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET-HITDTVMGTYGHLAPQYVTTC 204
+P I RD K+ ++L + DF L++ G++ T +GT ++AP+ +
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 205 -----DFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIV 259
D ++D+Y+ G L EL + D D + L PF E + + E+V
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML--PFEEEIGQHPSLEDMQEVV 266
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 170 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 224
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 225 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 139 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 193
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 194 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
N V Q+ H IL+L ++ LV E +G + +R L + +P
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYL---KNRVKPFSENEAR 115
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHIT 186
+ YLH I+ RD S++L + +K+ DF L+ + +P E H
Sbjct: 116 HFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-EKHY- 170
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILD 230
T+ GT +++P+ T + DV+S G LL GR D
Sbjct: 171 -TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
++Y + H HI+KL I+V EY + L+D I+ + + RR
Sbjct: 64 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQE---ARRFFQ 119
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ +A + H IV RD K ++L E VK+ DF LS + +G + T
Sbjct: 120 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 172
Query: 191 GTYGHLAPQYVTTCDFS-EKLDVYSFGAFLSELLTGR 226
G+ + AP+ ++ ++ ++DV+S G L +L R
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 205 NVDIWSVGCIMGEMIKG-GVL 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 162 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 216
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 217 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
++Y + H HI+KL I+V EY + L+D I+ + + RR
Sbjct: 55 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQE---ARRFFQ 110
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ +A + H IV RD K ++L E VK+ DF LS + +G + T
Sbjct: 111 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 163
Query: 191 GTYGHLAPQYVTTCDFS-EKLDVYSFGAFLSELLTGR 226
G+ + AP+ ++ ++ ++DV+S G L +L R
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 147 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 196
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 172 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 226
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 227 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPL-LL 124
+ I ++ +++H +I+KL+ LVFE++ + + A PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLI 108
Query: 125 KRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGE 182
K L LA+ H ++ RD K ++L + E +KL DF L + +P
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-R 161
Query: 183 THITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T+ + V T + AP+ + C +S +D++S G +E++T R +
Sbjct: 162 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 19 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 69
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 124
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 182 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGXVATR 206
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 188
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 193
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 191
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 136 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 185
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 20 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 70
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 125
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 19 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 69
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV----REHKDNIGSQYLLNWC 124
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 182 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 134 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 190 --APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 209
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 21 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 71
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 126
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H FG I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 213 SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY- 267
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + D++ +DV+S G L+ELL G+ I
Sbjct: 268 -RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 192
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 206
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 197
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 188
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 198
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 198
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 205
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 188
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGXVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + ++ +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGYVATR 209
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 22 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 72
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 127
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 185 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRR--LKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 71 VTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKD 130
++Y + H HI+KL I+V EY + L+D I+ + + RR
Sbjct: 59 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQE---ARRFFQ 114
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ +A + H IV RD K ++L E VK+ DF LS + +G + T
Sbjct: 115 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSC 167
Query: 191 GTYGHLAPQYVTTCDFS-EKLDVYSFGAFLSELLTGR 226
G+ + AP+ ++ ++ ++DV+S G L +L R
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMV-----------CHKILFPGRDYIDQW 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + ++ +
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMGYKE 206
Query: 209 KLDVYSFGAFLSELLTGRGIL 229
+D++S G + E++ G G+L
Sbjct: 207 NVDIWSVGCIMGEMIKG-GVL 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 68
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 123
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 198
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 192
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 205
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 191
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +I+ L +L+ E V G L+D + A +
Sbjct: 54 RRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 206
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K +++ + VKL DF L+ I +T +GT +++P+ + ++E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 209 KLDVYSFGAFLSEL 222
K D++S G L EL
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 192
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 183
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +++ VK+ DF L+ I E + T+ GT ++AP+ + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 209 KLDVYSFGAFLSELLTGR 226
++D++S G L LL G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 79 HDHILKLIGCCLET--PIAILVFEYVQHGTLWDRILGAPQTHFEPL--LLKRRLKDAVDA 134
H +++ L+G C + P+ ++V E+ + G L L + + F P + KD +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIV-EFCKFGNL-STYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 135 ANALAY-------LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-T 186
+ + Y + F R + RD +IL SE+NVVK+ DF L+ I + ++
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 187 DTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+AP+ + ++ + DV+SFG L E+ +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 182
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 183
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 182
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATR 182
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + + GT ++AP+ ++ S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 221 EVDVWSIGCIMYTLLVGK 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 135 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 184
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 182
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +++ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + + GT ++AP+ ++ S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 219 EVDVWSIGCIMYTLLVGK 236
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +++ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEG----ETHITDTVMGT 192
L YLH + RD K +IL E+ V++ DF +S + G + T +GT
Sbjct: 133 GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 193 YGHLAPQY---VTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V DF K D++SFG EL TG
Sbjct: 190 PCWMAPEVMEQVRGYDF--KADIWSFGITAIELATG 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 198 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +++ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +++ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEG----ETHITDTVMG 191
L YLH + RD K +IL E+ V++ DF +S + G + T +G
Sbjct: 127 EGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 192 TYGHLAPQY---VTTCDFSEKLDVYSFGAFLSELLTG 225
T +AP+ V DF K D++SFG EL TG
Sbjct: 184 TPCWMAPEVMEQVRGYDF--KADIWSFGITAIELATG 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 115 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +E+ VK+ DF L+ + E + + GT ++AP+ ++ S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 209 KLDVYSFGAFLSELLTGR 226
++DV+S G + LL G+
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V+ Q+ H +++ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+K +D N YLH + I D K +I+ ++N+ +KL DF L
Sbjct: 112 LSEEEATSFIKQILDGVN---YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I +G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 68
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 123
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 116 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 16/170 (9%)
Query: 58 QKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQT 117
Q+ F E+ I Q H +I+ L G + +++ EY+++G+L D L
Sbjct: 73 QRRDFLSEASI-----MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDG 126
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSIS 177
F + L L+ L+ + V RD +IL + V K+ DF +S
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMS------AVHRDLAARNILVNSNLVCKVSDFGMS-R 179
Query: 178 IPEGETHITDTVMGTYGHL---APQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ E + T G + AP+ + F+ DV+S+G + E+++
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 114 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 68
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV----REHKDNIGSQYLLNWC 123
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 144 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 121 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 117 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 68
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 123
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 20 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 70
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 125
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 25 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 75
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 130
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 21 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 71
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 126
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 21 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 71
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 126
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 62
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 117
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 175 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 21 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 71
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 126
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDLWSVGCIMGEMV-----------CHKILFPGRDYIDQW 234
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 28 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 78
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 133
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 134 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 191 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGETHITDTVM 190
+ +AL YLH + I+ RD K +IL +E+ +++ DF + + PE + + +
Sbjct: 142 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
GT +++P+ +T + D+++ G + +L+ G
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 24 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 74
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 129
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 130 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 187 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ D+ L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AL YLH I+ RD K +ILF+ + +KL DF +S D+ +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYW 201
Query: 196 LAPQYVTTCDFSE------KLDVYSFGAFLSEL 222
+AP+ V C+ S+ K DV+S G L E+
Sbjct: 202 MAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 199 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 15 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 65
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 120
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 178 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 206 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AL YLH I+ RD K +ILF+ + +KL DF +S D+ +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDSFIGTPYW 201
Query: 196 LAPQYVTTCDFSE------KLDVYSFGAFLSEL 222
+AP+ V C+ S+ K DV+S G L E+
Sbjct: 202 MAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 199 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 198 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 43 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 93
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 148
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 149 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 206 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 204 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 205 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 206 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
IF A + + Q+ F E+ I Q H +++ L G ++ +++ E++
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASI-----MGQFDHPNVIHLEGVVTKSTPVMIITEFM 90
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
++G+L D L F + L L+ LA +++ V R +IL +
Sbjct: 91 ENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY------VHRALAARNILVN 143
Query: 163 EENVVKLFDFSLSISIPEGETHITDT-VMGTYGHL---APQYVTTCDFSEKLDVYSFGAF 218
V K+ DF LS + + + T T +G + AP+ + F+ DV+S+G
Sbjct: 144 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV 203
Query: 219 LSELLT 224
+ E+++
Sbjct: 204 MWEVMS 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I EL++ T+ K ++
Sbjct: 52 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIM---ELREATSPKANKE------ILDEA 102
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 103 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 157
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF L+ + E E H
Sbjct: 158 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 215 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 43 IFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYV 102
I + +E+ + + Q N + V ++H +I+KL L+ EY
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96
Query: 103 QHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS 162
G ++D ++ + + K R +A+ Y H + IV RD K ++L
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYCH---QKRIVHRDLKAENLLLD 148
Query: 163 EENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF-SEKLDVYSFGAFLSE 221
+ +K+ DF S G D G + AP+ + ++DV+S G L
Sbjct: 149 ADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 222 LLTG 225
L++G
Sbjct: 207 LVSG 210
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 243 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 272
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 243 NVDIWSVGCIMGEMVR-----------HKILFPGRDYIDQW 272
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG----HLAPQYVTTC 204
I+ RD K S+I+ + +K+ DF L+ T T+ +M Y + AP+ +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTASTNFMMTPYVVTRYYRAPEVILGM 198
Query: 205 DFSEKLDVYSFGAFLSELLTGRGIL 229
+ E +D++S G + EL+ G I
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 210 NVDLWSVGCIMGEMV-----------CHKILFPGRDYIDQW 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+AL YLH I+ RD K +ILF+ + +KL DF +S D +GT
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDXFIGTPYW 201
Query: 196 LAPQYVTTCDFSE------KLDVYSFGAFLSEL 222
+AP+ V C+ S+ K DV+S G L E+
Sbjct: 202 MAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 45 SAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQH 104
+ +EL++ T+ K ++ A + + H+ +L+G CL + + L+ + +
Sbjct: 55 AIKELREATSPKANKE------ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPF 107
Query: 105 GTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEE 164
G L D + + H + + + L V A + YL R +V RD ++L
Sbjct: 108 GCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTP 160
Query: 165 NVVKLFDFSLS--ISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
VK+ DF L+ + E E H + +A + + ++ + DV+S+G + EL
Sbjct: 161 QHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 223 LT 224
+T
Sbjct: 220 MT 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
I+ RD K S+I+ + +K+ DF L+ + G + + + T + AP+ + + E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 209 KLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
+D++S G + E++ H +++P +Y+ +
Sbjct: 199 NVDLWSVGCIMGEMV-----------CHKILFPGRDYIDQW 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 64 HESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLL 123
++ ++ A + ++ +L+G CL + + LV + + +G L D + + + L
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHV----RENRGRLG 117
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEG 181
+ L + A ++YL +V RD ++L N VK+ DF L+ + I E
Sbjct: 118 SQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 182 ETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT----------GRGILDL 231
E H D +A + + F+ + DV+S+G + EL+T R I DL
Sbjct: 175 EYH-ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
Query: 232 VRDAHDLVYP 241
+ L P
Sbjct: 234 LEKGERLPQP 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ DF L+ H D + G T
Sbjct: 166 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATR 215
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + ++ +D++S G ++ELLTGR +
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+DA +++ +H RD K ++L + +KL DF + + E DT +
Sbjct: 186 ALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 191 GTYGHLAPQYVTTCD----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G FL E+L G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 106
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 107 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + +S +D++S G +E++T R +
Sbjct: 161 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTC---- 204
I+ RD K S+IL +KL DF +S + + D G ++AP+ +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQ 204
Query: 205 DFSEKLDVYSFGAFLSELLTGR 226
+ + DV+S G L EL TGR
Sbjct: 205 GYDVRSDVWSLGITLYELATGR 226
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K +++ + VKL DF L+ + E + V GT +++P+ + ++E
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNE 195
Query: 209 KLDVYSFGAFLSEL 222
K D++S G L EL
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +++ VK+ DF L+ I E + + GT ++AP+ + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 209 KLDVYSFGAFLSELLTGR 226
++D++S G L LL G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 20 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 70
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 125
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 20/213 (9%)
Query: 19 MIGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQM 77
+IG G SV++ I G+ +I + + G E + +
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIV-------DVAKFTSSPGLSTEDLKREASICHML 83
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF--EPLLLKRRLKDAVDAA 135
H HI++L+ + +VFE++ L I+ F + ++ ++A
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA- 142
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF-SEENV--VKLFDFSLSISIPEGETHITDTVMGT 192
L Y H I+ RD K +L S+EN VKL F ++I + E + +GT
Sbjct: 143 --LRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGT 196
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V + + +DV+ G L LL+G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H I+ RD K S++ +E++ +++ DF L+ E T + T +
Sbjct: 142 RGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----GYVATRWY 194
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
AP+ + +++ +D++S G ++ELL G+ +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 20 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 70
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 125
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
+ I ++ +++H +I+KL+ LVFE++ H L + + T L+K
Sbjct: 55 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIK 113
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI 185
L LA+ H ++ RD K ++L + E +KL DF L+ +
Sbjct: 114 SYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 186 TDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLTGRGI 228
T V+ T + AP+ + +S +D++S G +E++T R +
Sbjct: 168 THEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL 210
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+DA +++ ++H RD K ++L + +KL DF + + + DT +
Sbjct: 185 ALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 191 GTYGHLAPQYVTTCD----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G FL E+L G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 141 LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDTVMGTYGHLAPQ 199
+ F R + RD +IL SE+NVVK+ DF L+ I + ++ +AP+
Sbjct: 211 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
Query: 200 YVTTCDFSEKLDVYSFGAFLSELLT 224
+ ++ + DV+SFG L E+ +
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+DA +++ ++H RD K ++L + +KL DF + + + DT +
Sbjct: 180 ALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 191 GTYGHLAPQYVTTCD----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G FL E+L G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +++ VK+ DF L+ I E + + GT ++AP+ + S
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 209 KLDVYSFGAFLSELLTGR 226
++D++S G L LL G+
Sbjct: 206 EVDIWSLGCILYTLLVGK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
++ RD K ++ +++ VK+ DF L+ I E + + GT ++AP+ + S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 209 KLDVYSFGAFLSELLTGR 226
++D++S G L LL G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 76/181 (41%), Gaps = 9/181 (4%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGT---LWDRILGAPQTHFEPL 122
+ I ++ ++ H++I++L LVFE++ + + R +G E
Sbjct: 49 TAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN 108
Query: 123 LLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE 182
L+K L L F I+ RD K ++L ++ +KL DF L+ +
Sbjct: 109 LVK------YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 183 THITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPF 242
+ V+ + + + +S +D++S G L+E++TG+ + D L F
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
Query: 243 N 243
+
Sbjct: 223 D 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 141 LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDTVMGTYGHLAPQ 199
+ F R + RD +IL SE+NVVK+ DF L+ I + ++ +AP+
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 200 YVTTCDFSEKLDVYSFGAFLSELLT 224
+ ++ + DV+SFG L E+ +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 141 LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDTVMGTYGHLAPQ 199
+ F R + RD +IL SE+NVVK+ DF L+ I + ++ +AP+
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 200 YVTTCDFSEKLDVYSFGAFLSELLT 224
+ ++ + DV+SFG L E+ +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H I+ RD K S++ +E++ +++ DF L+ E T + T +
Sbjct: 142 RGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----GYVATRWY 194
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
AP+ + +++ +D++S G ++ELL G+ +
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 141 LHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHI-TDTVMGTYGHLAPQ 199
+ F R + RD +IL SE+NVVK+ DF L+ I + ++ +AP+
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 200 YVTTCDFSEKLDVYSFGAFLSELLT 224
+ ++ + DV+SFG L E+ +
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 77 MSHDHILKLIGCCLETP-IAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAA 135
++H ++L LIG L + ++ Y+ HG L + + +PQ + +K + + A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL-QFIRSPQRNPT---VKDLISFGLQVA 134
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGE-------THITDT 188
+ YL + V RD + + E VK+ DF L+ I + E H
Sbjct: 135 RGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 189 VMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRG 227
V T A + + T F+ K DV+SFG L ELLT RG
Sbjct: 192 VKWT----ALESLQTYRFTTKSDVWSFGVLLWELLT-RG 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V ++ H +I+ L +L+ E V G L+D + A +
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 125
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+ LK +D + YLH + I D K +I+ ++NV +KL DF +
Sbjct: 126 LTEDEATQFLKQILDGVH---YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 180 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 20/213 (9%)
Query: 19 MIGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQM 77
+IG G SV++ I G+ +I + + G E + +
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIV-------DVAKFTSSPGLSTEDLKREASICHML 85
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF--EPLLLKRRLKDAVDAA 135
H HI++L+ + +VFE++ L I+ F + ++ ++A
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA- 144
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF-SEENV--VKLFDFSLSISIPEGETHITDTVMGT 192
L Y H I+ RD K +L S+EN VKL F ++I + E + +GT
Sbjct: 145 --LRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGT 198
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ V + + +DV+ G L LL+G
Sbjct: 199 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 22 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 72
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV----REHKDNIGSQYLLNWC 127
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 185 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG--TLWDRILGAPQTHFEPLL 123
+ I V+ + H +I+ L LVFEY+ D H L
Sbjct: 46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLF 105
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEG 181
L + L+ LAY H + ++ RD K ++L +E +KL DF L + SIP
Sbjct: 106 LFQLLR-------GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP-- 153
Query: 182 ETHITDTVMGTYGHLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGR 226
T D + T + P + + D+S ++D++ G E+ TGR
Sbjct: 154 -TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+DA +++ ++H RD K ++L + +KL DF + + + DT +
Sbjct: 185 ALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 191 GTYGHLAPQYVTTCD----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G FL E+L G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 41/244 (16%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
A ++ I+ L G E P + E ++ G+L + L R L A
Sbjct: 121 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQA 175
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENV-VKLFDFSLSISI-PEG---ETHITDTV 189
L YLH R I+ D K ++L S + L DF ++ + P+G + D +
Sbjct: 176 LEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
GT H+AP+ V K+DV+S + +L G +P+ ++ +
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG-------------CHPWTQFFRGP 279
Query: 250 FEDNRFTEIVDPIIVQDL--SCTEKEQQLHASAQLTFECLNESPIDRPTMVD----VARR 303
+E P V+++ SC +AQ E L + PI R + + V R
Sbjct: 280 LCLKIASE---PPPVREIPPSCAP------LTAQAIQEGLRKEPIHRVSAAELGGKVNRA 330
Query: 304 LRQI 307
L+Q+
Sbjct: 331 LQQV 334
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V ++ H +I+ L +L+ E V G L+D + A +
Sbjct: 47 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 104
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+ LK +D + YLH + I D K +I+ ++NV +KL DF +
Sbjct: 105 LTEDEATQFLKQILDGVH---YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 159 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 31/170 (18%)
Query: 73 YAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKR----RL 128
YAA + + +K + + EY ++ TL+D I H E L +R RL
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI------HSENLNQQRDEYWRL 121
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL-------------- 174
+ AL+Y+H + I+ R+ K +I E VK+ DF L
Sbjct: 122 FRQI--LEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVT-TCDFSEKLDVYSFGAFLSELL 223
S ++P ++T + +GT ++A + + T ++EK+D YS G E +
Sbjct: 177 SQNLPGSSDNLT-SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTH 118
+ G E V ++ H +I+ L +L+ E V G L+D + A +
Sbjct: 54 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 111
Query: 119 FEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFSL 174
+ LK +D + YLH + I D K +I+ ++NV +KL DF +
Sbjct: 112 LTEDEATQFLKQILDGVH---YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 175 SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 166 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 41/244 (16%)
Query: 75 AQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA 134
A ++ I+ L G E P + E ++ G+L + L R L A
Sbjct: 140 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQA 194
Query: 135 ANALAYLHFGFPRPIVFRDFKTSHILFSEENV-VKLFDFSLSISI-PEG--ETHIT-DTV 189
L YLH R I+ D K ++L S + L DF ++ + P+G ++ +T D +
Sbjct: 195 LEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNY 249
GT H+AP+ V K+DV+S + +L G +P+ ++ +
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG-------------CHPWTQFFRGP 298
Query: 250 FEDNRFTEIVDPIIVQDL--SCTEKEQQLHASAQLTFECLNESPIDRPTMVD----VARR 303
+E P V+++ SC +AQ E L + PI R + + V R
Sbjct: 299 LCLKIASE---PPPVREIPPSCAP------LTAQAIQEGLRKEPIHRVSAAELGGKVNRA 349
Query: 304 LRQI 307
L+Q+
Sbjct: 350 LQQV 353
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ F L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 45 SAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQH 104
+ +EL++ T+ K ++ A + + H+ +L+G CL + + L+ + +
Sbjct: 55 AIKELREATSPKANKE------ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPF 107
Query: 105 GTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEE 164
G L D + + H + + + L V A + YL R +V RD ++L
Sbjct: 108 GCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTP 160
Query: 165 NVVKLFDFSLS--ISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
VK+ DF L+ + E E H + +A + + ++ + DV+S+G + EL
Sbjct: 161 QHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
Query: 223 LT 224
+T
Sbjct: 220 MT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 45 SAQELKQETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQH 104
+ +EL++ T+ K ++ A + + H+ +L+G CL + + L+ + +
Sbjct: 48 AIKELREATSPKANKE------ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPF 100
Query: 105 GTLWDRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEE 164
G L D + + H + + + L V A + YL R +V RD ++L
Sbjct: 101 GCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTP 153
Query: 165 NVVKLFDFSLS--ISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
VK+ DF L+ + E E H + +A + + ++ + DV+S+G + EL
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 223 LT 224
+T
Sbjct: 213 MT 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ D L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 57/253 (22%)
Query: 4 ILRKFKLWSKGKRTLMIGNGA-SVLQELIASSNGKYIPYR-IFSAQELKQETNNYDQKNG 61
+LRK++L K +G GA ++ + I G+ + + IF A + N+ D +
Sbjct: 7 VLRKYELVKK------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-----NSTDAQRT 55
Query: 62 FWHESCINNVTYAAQMSHDHILKLIGCCL--ETPIAILVFEYVQ---HGTLWDRILGAPQ 116
F + ++ H++I+ L+ LVF+Y++ H + IL
Sbjct: 56 FREIMILTELS-----GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH 110
Query: 117 THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS- 175
+ L + +K YLH G ++ RD K S+IL + E VK+ DF LS
Sbjct: 111 KQYVVYQLIKVIK----------YLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157
Query: 176 -------------ISIPEGETHITD------TVMGTYGHLAPQ-YVTTCDFSEKLDVYSF 215
+SI E + D + T + AP+ + + +++ +D++S
Sbjct: 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217
Query: 216 GAFLSELLTGRGI 228
G L E+L G+ I
Sbjct: 218 GCILGEILCGKPI 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYG----HLAPQYVTTC 204
I+ RD K S+I+ + +K+ DF L+ T T+ +M Y + AP+ +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTACTNFMMTPYVVTRYYRAPEVILGM 200
Query: 205 DFSEKLDVYSFGAFLSELLTG 225
++ +D++S G + EL+ G
Sbjct: 201 GYAANVDIWSVGCIMGELVKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF-----EPLLLKRRLKD-- 130
+H +I+ L+G C +++ EY +G L + L + F P +++
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 131 -------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ A +A+L + + RD +IL + + K+ DF L+ I
Sbjct: 162 LEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 184 HITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
++ +AP+ + C ++ + DV+S+G FL EL +
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF-----EPLLLKRRLKD-- 130
+H +I+ L+G C +++ EY +G L + L + F P +++
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 131 -------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ A +A+L + + RD +IL + + K+ DF L+ I
Sbjct: 160 LEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 184 HITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
++ +AP+ + C ++ + DV+S+G FL EL +
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ D L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 20 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 70
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 125
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 26/184 (14%)
Query: 52 ETNNYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRI 111
E +N DQ F E V Q H++++ +G C+ P ++ + TL+ +
Sbjct: 66 ERDNEDQLKAFKRE-----VMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV 120
Query: 112 LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFD 171
A L + + + A + + YLH + I+ +D K+ ++ + VV + D
Sbjct: 121 RDAKIV----LDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITD 172
Query: 172 FSL-SISIPEGETHITDTVM---GTYGHLAPQYVTTCD---------FSEKLDVYSFGAF 218
F L SIS D + G HLAP+ + FS+ DV++ G
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232
Query: 219 LSEL 222
EL
Sbjct: 233 WYEL 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMG---TY 193
L Y+H I+ RD K S++ +E+ +K+ D L+ H D + G T
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMTGYVATR 186
Query: 194 GHLAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + +++ +D++S G ++ELLTGR +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 68
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 123
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 15 KRTLMIGNGA--SVLQEL-IASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNV 71
K+ ++G+GA +V + L I IP I +EL++ T+ K ++
Sbjct: 25 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI---KELREATSPKANKE------ILDEA 75
Query: 72 TYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDA 131
A + + H+ +L+G CL + + L+ + + G L D + + H + + + L
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV----REHKDNIGSQYLLNWC 130
Query: 132 VDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS--ISIPEGETHITDTV 189
V A + YL R +V RD ++L VK+ DF + + E E H
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
+ +A + + ++ + DV+S+G + EL+T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF-----EPLLLKRRLKD-- 130
+H +I+ L+G C +++ EY +G L + L + F P +++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 131 -------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ A +A+L + + RD +IL + + K+ DF L+ I
Sbjct: 167 LEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 184 HITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
++ +AP+ + C ++ + DV+S+G FL EL +
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF-----EPLLLKRRLKD-- 130
+H +I+ L+G C +++ EY +G L + L + F P +++
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 131 -------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ A +A+L + + RD +IL + + K+ DF L+ I
Sbjct: 144 LEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 184 HITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
++ +AP+ + C ++ + DV+S+G FL EL +
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H I+ RD K S++ +E+ +++ DF L+ E T + T +
Sbjct: 134 RGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT----GYVATRWY 186
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGI 228
AP+ + +++ +D++S G ++ELL G+ +
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF L+ + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
K AV AL +LH ++ RD K S++L + VK+ DF +S + + D
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 189 VMGTYGHLAPQYVTT----CDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNE 244
G ++AP+ + +S K D++S G + EL R +P++
Sbjct: 215 --GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-------------FPYDS 259
Query: 245 YLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
+ + + + E P + D E T +CL ++ +RPT
Sbjct: 260 WGTPFQQLKQVVEEPSPQLPADKFSAE-------FVDFTSQCLKKNSKERPT 304
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T T+ GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---TLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T T+ GT +LAP+ + + +++
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---TLCGTPEYLAPEIILSKGYNK 203
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 204 AVDWWALGVLIYEMAAG 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 78 SHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHF-----EPLLLKRRLKD-- 130
+H +I+ L+G C +++ EY +G L + L + F P +++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN-FLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 131 -------AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ A +A+L + + RD +IL + + K+ DF L+ I
Sbjct: 167 LEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 184 HITD-TVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
++ +AP+ + C ++ + DV+S+G FL EL +
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ I+ PE + T + T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV--DAAN 136
H +I+ L + +V E ++ G L D+IL R AV
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-------RQKFFSEREASAVLFTITK 127
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEEN----VVKLFDFSLSISIPEGETHITDTVMGT 192
+ YLH + +V RD K S+IL+ +E+ +++ DF + + E + T T
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCYT 183
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ + + D++S G L +LTG
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 21/136 (15%)
Query: 137 ALAYLH-FGFPRPIVFRDFKTSHILFSEEN-VVKLFDFSLSISIPEGETHITDTVMGTYG 194
+LAY+H G I RD K ++L + V+KL DF + + GE +++ Y
Sbjct: 153 SLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 195 HLAPQYV-TTCDFSEKLDVYSFGAFLSELLTGR-------GILDLVRDAHDLVYPFNEYL 246
AP+ + +++ +D++S G ++EL+ G+ GI LV L P E +
Sbjct: 209 --APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 247 K----NYFEDNRFTEI 258
K NY E ++F +I
Sbjct: 267 KTMNPNYME-HKFPQI 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + T T+ GT +LAP+ + + +++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSKGYNK 238
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 97 LVFEYVQHGTLWD--RILGAPQTHFEPLLLKRRLKDAV--DAANALAYLHFGFPRPIVFR 152
L+F+Y +H LW + A + + +P+ L R + ++ + + YLH + ++ R
Sbjct: 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHR 152
Query: 153 DFKTSHILF----SEENVVKLFD--FSLSISIPEGETHITDTVMGTYGHLAPQYVTTC-D 205
D K ++IL E VK+ D F+ + P D V+ T+ + AP+ +
Sbjct: 153 DLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH 212
Query: 206 FSEKLDVYSFGAFLSELLTGRGIL 229
+++ +D+++ G +ELLT I
Sbjct: 213 YTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISI---------PEGETHITDTVMGTYGHLAPQ 199
++ RD K S++L + +K+ DF L+ I P G+ + T + AP+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 200 -YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+T+ +S +DV+S G L+EL R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + + +K+ DF L+ ++ P+ + T + T
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISI---------PEGETHITDTVMGTYGHLAPQ 199
++ RD K S++L + +K+ DF L+ I P G+ + T + AP+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 200 -YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+T+ +S +DV+S G L+EL R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 151
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L E+ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 152 RDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 207
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 208 WWALGVLIYEMAAG 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 79 HDHILKLIGCCLETPI-----AILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKDA 131
H ++++L+ C + LVFE+V T D+ AP P L +KD
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK---APP----PGLPAETIKDL 125
Query: 132 VDA-ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ L +LH IV RD K +IL + VKL DF L+ I + +T V+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALTPVVV 181
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
T + AP+ + ++ +D++S G +E+
Sbjct: 182 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H +V RD K ++ +E+ +K+ DF L+ + +T V+ T +
Sbjct: 137 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVV-TRWY 189
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + + +++ +D++S G ++E+LTG+ +
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H +V RD K ++ +E+ +K+ DF L+ + +T V+ T +
Sbjct: 155 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVV-TRWY 207
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + + +++ +D++S G ++E+LTG+ +
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 79 HDHILKLIGCCL------ETPIAILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKD 130
H ++++L C ET + LVFE+V T D++ EP + +KD
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLT-LVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 131 AV-DAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTV 189
+ L +LH +V RD K +IL + +KL DF L+ I + +T V
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVV 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+ T + AP+ + ++ +D++S G +E+
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 79 HDHILKLIGCCL------ETPIAILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKD 130
H ++++L C ET + LVFE+V T D++ EP + +KD
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLT-LVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 131 AV-DAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTV 189
+ L +LH +V RD K +IL + +KL DF L+ I + +T V
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVV 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
+ T + AP+ + ++ +D++S G +E+
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 79 HDHILKLIGCCL------ETPIAILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKD 130
H ++++L C ET + LVFE+V T D++ EP + +KD
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLT-LVFEHVDQDLTTYLDKVP-------EPGVPTETIKD 124
Query: 131 AV-DAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTV 189
+ L +LH +V RD K +IL + +KL DF L+ I + +T V
Sbjct: 125 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVV 180
Query: 190 MGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL 223
+ T + AP+ + ++ +D++S G +E+
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHG---TLWDRILG 113
+ K+G + + + + ++SH +I+ L+ LVF++++ + D L
Sbjct: 50 EAKDGI-NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV 108
Query: 114 APQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFS 173
+H + +L L YLH + I+ RD K +++L E V+KL DF
Sbjct: 109 LTPSHIKAYMLM--------TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFG 157
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELL 223
L+ S V+ T + AP+ + + +D+++ G L+ELL
Sbjct: 158 LAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 111
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 112 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 163 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +++ DF L+ + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +K+ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 111
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 112 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 163 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAV--DAAN 136
H +I+ L + +V E + G L D+IL R AV
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-------RQKFFSEREASAVLFTITK 127
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEEN----VVKLFDFSLSISIPEGETHITDTVMGT 192
+ YLH + +V RD K S+IL+ +E+ +++ DF + + E + T T
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCYT 183
Query: 193 YGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
+AP+ + + D++S G L LTG
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 79 HDHILKLIGCCLETPI-----AILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKDA 131
H ++++L+ C + LVFE+V T D+ AP P L +KD
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK---APP----PGLPAETIKDL 117
Query: 132 VDA-ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ L +LH IV RD K +IL + VKL DF L+ D V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVV 172
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
T + AP+ + ++ +D++S G +E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 156 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 129 KDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDT 188
K AV AL +LH ++ RD K S++L + VK+ DF +S + + D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 189 VMGTYGHLAPQYVTT----CDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDLVYPFNE 244
G ++AP+ + +S K D++S G + EL R +P++
Sbjct: 171 --GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-------------FPYDS 215
Query: 245 YLKNYFEDNRFTEIVDPIIVQDLSCTEKEQQLHASAQLTFECLNESPIDRPT 296
+ + + + E P + D E T +CL ++ +RPT
Sbjct: 216 WGTPFQQLKQVVEEPSPQLPADKFSAE-------FVDFTSQCLKKNSKERPT 260
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLXGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLAGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISI---------PEGETHITDTVMGTYGHLAPQ 199
++ RD K S++L + +K+ DF L+ I P G+ + T + AP+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 200 -YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+T+ +S +DV+S G L+EL R I
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHL 196
L++LH ++ RD K ++L +E VKL DF +S + + +T +GT +
Sbjct: 141 GLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWM 196
Query: 197 APQYVTTCD------FSEKLDVYSFGAFLSELLTG 225
AP+ V CD + K D++S G E+ G
Sbjct: 197 APE-VIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 141 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARFY----------AAQIVLTFEYLH---SLDLIY 164
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 220
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H I+ RD K ++ +E+ +K+ DF L+ + ++ + V+ T +
Sbjct: 139 KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMXGXVV-TRWY 191
Query: 196 LAPQYVTT-CDFSEKLDVYSFGAFLSELLTGRGIL 229
AP+ + +++ +D++S G ++E++TG+ +
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 134 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 141 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+D+ + L Y+H RD K +IL ++L DF + + E T + +
Sbjct: 187 AIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 191 GTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G + E+L G
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 134 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 225
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 142 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 133 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI--------LVFEYVQHGTLW 108
++K GF + + + + H++++ LI C LVF++ +H
Sbjct: 55 NEKEGF-PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG 113
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+L F +KR ++ + N L Y+H I+ RD K +++L + + V+K
Sbjct: 114 --LLSNVLVKFTLSEIKRVMQMLL---NGLYYIHRN---KILHRDMKAANVLITRDGVLK 165
Query: 169 LFDFSL----SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
L DF L S++ + V+ + + D+ +D++ G ++E+ T
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
Query: 225 GRGILDLVRDAHDLV 239
I+ + H L
Sbjct: 226 RSPIMQGNTEQHQLA 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 156 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 152 RDFKTSHILFSEENVVKLFDFSL-SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKL 210
RD K +IL S ++ L DF + S + E T + +TV GT + AP+ + + +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRA 216
Query: 211 DVYSFGAFLSELLTG 225
D+Y+ L E LTG
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGIL 229
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 144 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLS-ISIPEGE-THITDTVMGTYG 194
L Y+H ++ RD K S++L + +K+ DF L+ ++ P+ + T + T
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 195 HLAPQ-YVTTCDFSEKLDVYSFGAFLSELLTGRGI 228
+ AP+ + + +++ +D++S G L+E+L+ R I
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI--------LVFEYVQHGTLW 108
++K GF + + + + H++++ LI C LVF++ +H
Sbjct: 55 NEKEGF-PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG 113
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+L F +KR ++ + N L Y+H I+ RD K +++L + + V+K
Sbjct: 114 --LLSNVLVKFTLSEIKRVMQMLL---NGLYYIHRN---KILHRDMKAANVLITRDGVLK 165
Query: 169 LFDFSL----SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
L DF L S++ + V+ + + D+ +D++ G ++E+ T
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
Query: 225 GRGILDLVRDAHDLV 239
I+ + H L
Sbjct: 226 RSPIMQGNTEQHQLA 240
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 165
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 221
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 164
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 220
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 212
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 213 AVDWWALGVLIYEMAAG 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 218
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI--------LVFEYVQHGTLW 108
++K GF + + + + H++++ LI C LVF++ +H
Sbjct: 54 NEKEGF-PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG 112
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+L F +KR ++ + N L Y+H I+ RD K +++L + + V+K
Sbjct: 113 --LLSNVLVKFTLSEIKRVMQMLL---NGLYYIHRN---KILHRDMKAANVLITRDGVLK 164
Query: 169 LFDFSL----SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
L DF L S++ + V+ + + D+ +D++ G ++E+ T
Sbjct: 165 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
Query: 225 GRGILDLVRDAHDLV 239
I+ + H L
Sbjct: 225 RSPIMQGNTEQHQLA 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAI--------LVFEYVQHGTLW 108
++K GF + + + + H++++ LI C LVF++ +H
Sbjct: 55 NEKEGF-PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG 113
Query: 109 DRILGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVK 168
+L F +KR ++ + N L Y+H I+ RD K +++L + + V+K
Sbjct: 114 --LLSNVLVKFTLSEIKRVMQMLL---NGLYYIHRN---KILHRDMKAANVLITRDGVLK 165
Query: 169 LFDFSL----SISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
L DF L S++ + V+ + + D+ +D++ G ++E+ T
Sbjct: 166 LADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
Query: 225 GRGILDLVRDAHDLV 239
I+ + H L
Sbjct: 226 RSPIMQGNTEQHQLA 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 164
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 220
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 210
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 238
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 238
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 210
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI---PEGETHITDTVMGT 192
L Y+H ++ RD K S++L +E +K+ DF ++ + P + + T
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 193 YGHLAPQYVTTC-DFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDL 238
+ AP+ + + ++++ +D++S G E+L R + H L
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA-ANALAYLHFGFPRPIVFRDFK 155
LV E ++ G L D+IL + +R + + YLH + +V RD K
Sbjct: 98 LVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLK 148
Query: 156 TSHILFSEEN----VVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
S+IL+ +E+ +++ DF + + E + T T +AP+ + + E D
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 212 VYSFGAFLSELLTG 225
++S G L +L G
Sbjct: 208 IWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 97 LVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDA-ANALAYLHFGFPRPIVFRDFK 155
LV E ++ G L D+IL + +R + + YLH + +V RD K
Sbjct: 98 LVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLK 148
Query: 156 TSHILFSEEN----VVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
S+IL+ +E+ +++ DF + + E + T T +AP+ + + E D
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 212 VYSFGAFLSELLTG 225
++S G L +L G
Sbjct: 208 IWSLGILLYTMLAG 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 59 KNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-T 117
+ G E V+ ++ H +++ L IL+ E V G L+D + T
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLT 112
Query: 118 HFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENV----VKLFDFS 173
E +++ + V ++L HF D K +I+ + NV +K+ DF
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHF---------DLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 174 LSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELLTG 225
L+ I G + GT +AP+ V + D++S G LL+G
Sbjct: 164 LAHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 79 HDHILKLIGCCLETPI-----AILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKDA 131
H ++++L+ C + LVFE+V T D+ AP P L +KD
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK---APP----PGLPAETIKDL 117
Query: 132 VDA-ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ L +LH IV RD K +IL + VKL DF L+ I + + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALAPVVV 173
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSEL 222
T + AP+ + ++ +D++S G +E+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K +++ ++ +++ DF + + +G T + GT +LAP+ + + +++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI---PEGETHITDTVMGT 192
L Y+H ++ RD K S++L +E +K+ DF ++ + P + + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 193 YGHLAPQYVTTC-DFSEKLDVYSFGAFLSELLTGR 226
+ AP+ + + ++++ +D++S G E+L R
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 164
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K +++ ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 165 RDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIIISKGYNKAVD 220
Query: 212 VYSFGAFLSELLTG 225
++ G + E+ G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT +LAP + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPAIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSE 208
+++RD K ++L ++ +++ DF + + +G T + GT LAP+ + + +++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEALAPEIILSKGYNK 217
Query: 209 KLDVYSFGAFLSELLTG 225
+D ++ G + E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 97 LVFEYVQHGTLWDRI-----LGAPQTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVF 151
+V EYV G ++ + P F A YLH +++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFY----------AAQIVLTFEYLH---SLDLIY 164
Query: 152 RDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLD 211
RD K ++L ++ +++ DF + + +G T + GT +LAP+ + + +++ +D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTW---XLCGTPEYLAPEIILSKGYNKAVD 220
Query: 212 VYSFGAFLSELLTG 225
++ G + ++ G
Sbjct: 221 WWALGVLIYQMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDAA 135
+ H +I++ L +V EY G L++RI A + + E ++L V A
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF--SEENVVKLFDFSLS-ISIPEGETHITDTVMGT 192
+A+ H RD K + L S +K+ DF S S+ + + +GT
Sbjct: 132 HAMQVAH---------RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK---SAVGT 179
Query: 193 YGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
++AP+ + ++ K+ DV+S G L +L G
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 20/153 (13%)
Query: 79 HDHILKLIGCCLETPI-----AILVFEYVQHG--TLWDRILGAPQTHFEPLLLKRRLKDA 131
H ++++L+ C + LVFE+V T D+ AP P L +KD
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK---APP----PGLPAETIKDL 117
Query: 132 VDA-ANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
+ L +LH IV RD K +IL + VKL DF L+ I + + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALFPVVV 173
Query: 191 GTYGHLAPQYVTTCDFSEKLDVYSFGAFLSELL 223
T + AP+ + ++ +D++S G +E+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 69 NNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTL--WDR---ILGAPQTHFEPLL 123
N + + +++ L G +++EY+++ ++ +D +L T F P+
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 124 LKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGET 183
+ + + +V N+ +Y+H + I RD K S+IL + VKL DF E E
Sbjct: 152 VIKCIIKSV--LNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESEY 201
Query: 184 HITDTVM---GTYGHLAPQYVT--TCDFSEKLDVYSFGAFL 219
+ + GTY + P++ + + K+D++S G L
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 21/209 (10%)
Query: 20 IGNGA-SVLQELIASSNGKYIPYRIFSAQELKQETNNYDQKNGFWHESCINNVTYAAQMS 78
+G G +V+++ I+ S G+ ++A+ LK+ D + HE + + +
Sbjct: 37 LGRGKFAVVRQCISKSTGQE-----YAAKFLKKRRRGQDCRAEILHEIAVLELAKSC--- 88
Query: 79 HDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRLKDAVDAANAL 138
++ L T IL+ EY G ++ L + R +K ++ +
Sbjct: 89 -PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG---V 144
Query: 139 AYLHFGFPRPIVFRDFKTSHILFSE---ENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
YLH IV D K +IL S +K+ DF +S I G +MGT +
Sbjct: 145 YYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEY 199
Query: 196 LAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
LAP+ + + D+++ G LLT
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 121 PLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISI 178
PL LK A+ ++H P PI+ RD K ++L S + +KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+D+ + L Y+H RD K ++L ++L DF + + + T + +
Sbjct: 187 AIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 191 GTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G + E+L G
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+D+ + L Y+H RD K ++L ++L DF + + + T + +
Sbjct: 203 AIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 191 GTYGHLAPQYVTTCD-----FSEKLDVYSFGAFLSELLTG 225
GT +++P+ + + + + D +S G + E+L G
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGH 195
+A+ YL + I+ RD K +I+ +E+ +KL DF + + G+ T GT +
Sbjct: 141 SAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY--TFCGTIEY 195
Query: 196 LAPQYVTTCDF-SEKLDVYSFGAFLSELL 223
AP+ + + +L+++S G L L+
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 149 IVFRDFKTSHILFSEE--NVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF 206
I+ D K +IL ++ + +K+ DF S E T + + + AP+ + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFYRAPEVILGARY 276
Query: 207 SEKLDVYSFGAFLSELLTGRGIL 229
+D++S G L+ELLTG +L
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLL 299
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDAA 135
+ H +I++ L +V EY G L++RI A + + E ++L V
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKL----FDFSLSISIPEGETHITDTVMG 191
+A+ H RD K + L +L F +S S + + DTV G
Sbjct: 132 HAMQVCH---------RDLKLENTLLDGSPAPRLKICAFGYSKSSVL---HSQPKDTV-G 178
Query: 192 TYGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
T ++AP+ + ++ K+ DV+S G L +L G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 47/207 (22%)
Query: 116 QTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS------------E 163
Q + P+ L R++ A+ +A+LH I+ RD K +IL S
Sbjct: 130 QKEYNPISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 164 ENV-VKLFDFSLSISIPEGETHITDTV---MGTYGHLAPQYV---TTCDFSEKLDVYSFG 216
EN+ + + DF L + G+ + GT G AP+ + T + +D++S G
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Query: 217 AFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQD-LSCTEKEQQ 275
+L+ +G +PF + +R + I+ I D + C
Sbjct: 241 CVFYYILS-KG-----------KHPFGDKY------SRESNIIRGIFSLDEMKCLHDRSL 282
Query: 276 LHASAQLTFECLNESPIDRPTMVDVAR 302
+ + L + ++ P+ RPT + V R
Sbjct: 283 IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 149 IVFRDFKTSHILFSEE--NVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF 206
I+ D K +IL ++ + +K+ DF S E T + + + AP+ + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYTXIQSRFYRAPEVILGARY 276
Query: 207 SEKLDVYSFGAFLSELLTGRGIL 229
+D++S G L+ELLTG +L
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLL 299
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 47/207 (22%)
Query: 116 QTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS------------E 163
Q + P+ L R++ A+ +A+LH I+ RD K +IL S
Sbjct: 130 QKEYNPISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 164 ENV-VKLFDFSLSISIPEGETHITDTV---MGTYGHLAPQYV---TTCDFSEKLDVYSFG 216
EN+ + + DF L + G+ + GT G AP+ + T + +D++S G
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Query: 217 AFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQD-LSCTEKEQQ 275
+L+ +G +PF + +R + I+ I D + C
Sbjct: 241 CVFYYILS-KG-----------KHPFGDKY------SRESNIIRGIFSLDEMKCLHDRSL 282
Query: 276 LHASAQLTFECLNESPIDRPTMVDVAR 302
+ + L + ++ P+ RPT + V R
Sbjct: 283 IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFS-EENVVKLFDFSLSISIPEGETHITDTVMGTYG 194
L +LH P PI+ RD K +I + VK+ D L+ V+GT
Sbjct: 140 KGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPE 195
Query: 195 HLAPQYVTTCDFSEKLDVYSFGAFLSELLT 224
AP+ + E +DVY+FG E T
Sbjct: 196 FXAPEXYEE-KYDESVDVYAFGXCXLEXAT 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 55 NYDQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGA 114
Y ++ E+ + + H +I++ L ++ EY G L++RI A
Sbjct: 51 KYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA 110
Query: 115 PQ-THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILF--SEENVVKLFD 171
+ + E ++L V +++ H RD K + L S +K+ D
Sbjct: 111 GRFSEDEARFFFQQLLSGVSYCHSMQICH---------RDLKLENTLLDGSPAPRLKICD 161
Query: 172 FSLSISIPEGETHI-TDTVMGTYGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
F S S H + +GT ++AP+ + ++ K+ DV+S G L +L G
Sbjct: 162 FGYSKS---SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDAA 135
+ H +I++ L +V EY G L++RI A + + E ++L V
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF--SEENVVKLFDFSLSISIPEGETHI-TDTVMGT 192
+A+ H RD K + L S +K+ DF S S H + +GT
Sbjct: 132 HAMQVCH---------RDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQPKSTVGT 179
Query: 193 YGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
++AP+ + ++ K+ DV+S G L +L G
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 137 ALAYLHFGFPRPIVFRDFKTSHILFSEENVV-KLFDFSLSISIPEGETHITDTVMGTYGH 195
L Y+H ++ RD K +++ + E++V K+ DF L+ I D GH
Sbjct: 132 GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLA--------RIMDPHYSHKGH 180
Query: 196 LAPQYVTT-----------CDFSEKLDVYSFGAFLSELLTGRGILDLVRDAHDL 238
L+ VT ++++ +D+++ G +E+LTG+ L AH+L
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK---TLFAGAHEL 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDAA 135
+ H +I++ L +V EY G L++RI A + + E ++L V
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 130
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILF--SEENVVKLFDFSLS-ISIPEGETHITDTVMGT 192
+A+ H RD K + L S +K+ DF S S+ + T +GT
Sbjct: 131 HAMQVCH---------RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGT 178
Query: 193 YGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
++AP+ + ++ K+ DV+S G L +L G
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 51/211 (24%)
Query: 116 QTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS------------E 163
Q + P+ L R++ A+ +A+LH I+ RD K +IL S
Sbjct: 112 QKEYNPISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 162
Query: 164 ENV-VKLFDFSLSISIPEGETHITDTV---MGTYGHLAPQYV-------TTCDFSEKLDV 212
EN+ + + DF L + G++ + GT G AP+ + T + +D+
Sbjct: 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222
Query: 213 YSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQD-LSCTE 271
+S G +L+ +G +PF + + +R + I+ I D + C
Sbjct: 223 FSMGCVFYYILS-KG-----------KHPFGD------KYSRESNIIRGIFSLDEMKCLH 264
Query: 272 KEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
+ + L + ++ P+ RPT + V R
Sbjct: 265 DRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 149 IVFRDFKTSHILFSEE--NVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDF 206
I+ D K +IL ++ + +K+ DF S E + + + AP+ + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY----EHQRVYXXIQSRFYRAPEVILGARY 276
Query: 207 SEKLDVYSFGAFLSELLTGRGIL 229
+D++S G L+ELLTG +L
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLL 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 84/211 (39%), Gaps = 51/211 (24%)
Query: 116 QTHFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFS------------E 163
Q + P+ L R++ A+ +A+LH I+ RD K +IL S
Sbjct: 112 QKEYNPISLLRQI------ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGA 162
Query: 164 ENV-VKLFDFSLSISIPEGETHITDTV---MGTYGHLAPQYV-------TTCDFSEKLDV 212
EN+ + + DF L + G+ + GT G AP+ + T + +D+
Sbjct: 163 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222
Query: 213 YSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQD-LSCTE 271
+S G +L+ +G +PF + + +R + I+ I D + C
Sbjct: 223 FSMGCVFYYILS-KG-----------KHPFGD------KYSRESNIIRGIFSLDEMKCLH 264
Query: 272 KEQQLHASAQLTFECLNESPIDRPTMVDVAR 302
+ + L + ++ P+ RPT + V R
Sbjct: 265 DRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 77 MSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ-THFEPLLLKRRLKDAVDAA 135
+ H +I++ L +V EY G L++RI A + + E ++L V
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 136 NALAYLHFGFPRPIVFRDFKTSHILFSEENVVKL----FDFSLSISIPEGETHITDTVMG 191
+A+ H RD K + L +L F +S S S+ + T +G
Sbjct: 132 HAMQVCH---------RDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKST---VG 178
Query: 192 TYGHLAPQYVTTCDFSEKL-DVYSFGAFLSELLTG 225
T ++AP+ + ++ K+ DV+S G L +L G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 153 DFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVMGTYGHLAPQYVTTCDFSEKLDV 212
D K I ++ +KL DF + ++ +++ T + AP+ + + D+
Sbjct: 187 DGKKIQIYRTKSTGIKLIDFGCATF----KSDYHGSIINTRQYRAPEVILNLGWDVSSDM 242
Query: 213 YSFGAFLSELLTG 225
+SFG L+EL TG
Sbjct: 243 WSFGCVLAELYTG 255
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 131 AVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSLSISIPEGETHITDTVM 190
A+D+ + L Y+H RD K +IL ++L DF + + T + +
Sbjct: 174 AIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 191 GTYGHLAPQYVTTC-------DFSEKLDVYSFGAFLSELLTGR 226
GT +L+P+ + + + D ++ G F E+ G+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 25/180 (13%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ 116
D+ + + ES + +++SH H++ G C ILV E+V+ G+L D L +
Sbjct: 49 DKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSL-DTYLKKNK 107
Query: 117 THFEPLLLKRRLKDAVDAANALAY-LHFGFPRPIVFRDFKTSHILFSEEN--------VV 167
L ++ A LA+ +HF ++ + +IL E +
Sbjct: 108 NCINILW-------KLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI 160
Query: 168 KLFDFSLSISI-PEGETHITDTVMGTYGHLAPQYVTTC-DFSEKLDVYSFGAFLSELLTG 225
KL D +SI++ P+ D + + P+ + + + D +SFG L E+ +G
Sbjct: 161 KLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
In Complex With Asparaginyl-Adenylate
pdb|3M4P|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
In Complex With Asparaginyl-Adenylate
pdb|3M4P|C Chain C, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
In Complex With Asparaginyl-Adenylate
pdb|3M4P|D Chain D, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
In Complex With Asparaginyl-Adenylate
pdb|3M4Q|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
pdb|3M4Q|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
Length = 456
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 245 YLKNYFEDNRFTEIVDPIIVQ 265
Y + Y+ DN FTEI P IV+
Sbjct: 165 YFRKYYHDNHFTEIQPPTIVK 185
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 57 DQKNGFWHESCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQ 116
D+ + + ES + +++SH H++ G C+ ILV E+V+ G+L D L +
Sbjct: 49 DKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL-DTYLKKNK 107
Query: 117 THFEPLLLKRRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEEN--------VVK 168
+L K + + AA +HF ++ + +IL E +K
Sbjct: 108 NCIN-ILWKLEVAKQLAAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161
Query: 169 LFDFSLSISI-PEGETHITDTVMGTYGHLAPQYVTTC-DFSEKLDVYSFGAFLSELLTG 225
L D +SI++ P+ D + + P+ + + + D +SFG L E+ +G
Sbjct: 162 LSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2D0A|A Chain A, Crystal Structure Of Bst-Rnase Hiii
pdb|2D0B|A Chain A, Crystal Structure Of Bst-Rnase Hiii In Complex With Mg2+
pdb|2D0C|A Chain A, Crystal Structure Of Bst-Rnase Hiii In Complex With Mn2+
Length = 310
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 70 NVTYAAQMSHDHILKLIGCCLET-PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
V + Q++ + I ++ +ET P A+ V + Q+ W R G PQT + LL R L
Sbjct: 127 GVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNR-WQR-SGMPQTKMKALLHNRTL 184
Query: 129 KDAVDA 134
VDA
Sbjct: 185 VKLVDA 190
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 27/103 (26%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISI--PEGET------------------HITDT 188
I+ RD K ++ L +++ VK+ DF L+ ++ PE H +
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 189 VMGTYGHL------APQYVTTCD-FSEKLDVYSFGAFLSELLT 224
GH+ AP+ + + ++E +DV+S G +ELL
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3ASM|A Chain A, Crystal Structure Of Q54a Mutant Protein Of Bst-Rnase Hiii
Length = 310
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 70 NVTYAAQMSHDHILKLIGCCLET-PIAILVFEYVQHGTLWDRILGAPQTHFEPLLLKRRL 128
V + Q++ + I ++ +ET P A+ V + Q+ W R G PQT + LL R L
Sbjct: 127 GVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNR-WQR-SGMPQTKMKALLHNRTL 184
Query: 129 KDAVDA 134
VDA
Sbjct: 185 VKLVDA 190
>pdb|2QVA|A Chain A, Crystal Structure Of Drosophila Melanogaster Translin
Protein
pdb|2QVA|B Chain B, Crystal Structure Of Drosophila Melanogaster Translin
Protein
pdb|2QVA|C Chain C, Crystal Structure Of Drosophila Melanogaster Translin
Protein
pdb|2QVA|D Chain D, Crystal Structure Of Drosophila Melanogaster Translin
Protein
Length = 247
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 160 LFSEENVVKLFDFSLSISIPEG-ETHITDTVMGTY------GHLAPQYVTTCDFSEKLDV 212
L + E V ++ L IS EG + D ++G A VT D+ L++
Sbjct: 126 LVTRETVAEML--GLKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERSLNI 183
Query: 213 YSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK 272
F+ +L TG +L+L D L F+ LK ++ + E+V + ++ LS EK
Sbjct: 184 ---SHFIGDLNTGFRLLNLKNDG--LRKRFDA-LK--YDVKKIEEVVYDVSIRGLSSKEK 235
Query: 273 EQQ 275
+QQ
Sbjct: 236 DQQ 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 22/98 (22%)
Query: 149 IVFRDFKTSHILFSEENVVKLFDFSLSISI-PEGETHITDTV------------------ 189
I+ RD K ++ L +++ VK+ DF L+ +I E +T+I + +
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 190 --MGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSELLT 224
+ T + AP+ + + +++ +D++S G +ELL
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2QRX|A Chain A, Crystal Structure Of Drosophila Melanogaster Translin
Protein
Length = 235
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 160 LFSEENVVKLFDFSLSISIPEG-ETHITDTVMGTY------GHLAPQYVTTCDFSEKLDV 212
L + E V ++ L IS EG + D ++G A VT D+ L++
Sbjct: 114 LVTRETVAEML--GLKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERSLNI 171
Query: 213 YSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK 272
F+ +L TG +L+L D L F+ LK ++ + E+V + ++ LS EK
Sbjct: 172 ---SHFIGDLNTGFRLLNLKNDG--LRKRFDA-LK--YDVKKIEEVVYDVSIRGLSSKEK 223
Query: 273 EQQ 275
+QQ
Sbjct: 224 DQQ 226
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 14/160 (8%)
Query: 66 SCINNVTYAAQMSHDHILKLIGCCLETPIAILVFEYVQHGTLWDRILGAPQTHFEPLLLK 125
S + + ++ H +I++L LVFE+ + + +P ++K
Sbjct: 47 SALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL--KKYFDSCNGDLDPEIVK 104
Query: 126 RRLKDAVDAANALAYLHFGFPRPIVFRDFKTSHILFSEENVVKLFDFSL--SISIPEGET 183
L L L F R ++ RD K ++L + +KL DF L + IP
Sbjct: 105 SFL------FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP---V 155
Query: 184 HITDTVMGTYGHLAPQYVTTCD-FSEKLDVYSFGAFLSEL 222
+ T + P + +S +D++S G +EL
Sbjct: 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|4DG7|A Chain A, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|B Chain B, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|C Chain C, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|D Chain D, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|E Chain E, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|F Chain F, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|G Chain G, Low Resolution Structure Of Drosophila Translin
pdb|4DG7|H Chain H, Low Resolution Structure Of Drosophila Translin
Length = 255
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 160 LFSEENVVKLFDFSLSISIPEG-ETHITDTVMGTY------GHLAPQYVTTCDFSEKLDV 212
L + E V ++ L IS EG + D ++G A VT D+ L++
Sbjct: 134 LVTRETVAEML--GLKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNI 191
Query: 213 YSFGAFLSELLTGRGILDLVRDAHDLVYPFNEYLKNYFEDNRFTEIVDPIIVQDLSCTEK 272
F+ +L TG +L+L D L F+ LK ++ + E+V + ++ LS EK
Sbjct: 192 ---SHFIGDLNTGFRLLNLKNDG--LRKRFDA-LK--YDVKKIEEVVYDVSIRGLSSKEK 243
Query: 273 EQQ 275
+QQ
Sbjct: 244 DQQ 246
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,711,583
Number of Sequences: 62578
Number of extensions: 413750
Number of successful extensions: 2578
Number of sequences better than 100.0: 930
Number of HSP's better than 100.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 643
Number of HSP's that attempted gapping in prelim test: 1386
Number of HSP's gapped (non-prelim): 1065
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)