BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043529
(307 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 18/257 (7%)
Query: 36 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTH 95
PPGP WP+IGN +G + S L+ +YG + Q++ L
Sbjct: 11 PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ 70
Query: 96 DALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKIC--LMELFTAKRLNSYEYIR-- 151
+ F+ RP A+ + + S + + Y +W+ R+ +M F ++ S + +
Sbjct: 71 GSAFADRPSFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGH 129
Query: 152 -----VEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNEIVARHEFKEM 206
E L +R + G VMS + G +Y+++ E
Sbjct: 130 VLSEARELVALLVRG--SADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSH 187
Query: 207 ADELFILGGVLDIGDMIPWLGFL--DLQGYIKRMKVLAKKFDRLFEYELDEH-NARRKGV 263
+E G + D++PWL + ++ + + L + F + H + R G
Sbjct: 188 NEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGA 247
Query: 264 DNYEAKDMMDVLLQLAD 280
+DMMD + A+
Sbjct: 248 ---APRDMMDAFILSAE 261
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 30/260 (11%)
Query: 36 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTH 95
PP P WP++G++ +G P+ ++ +S++YG ++Q++ + L
Sbjct: 18 PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQ 77
Query: 96 DALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFT-------AKRLNSY- 147
F RP L T S + GP W R++ L T A + Y
Sbjct: 78 GDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYL 137
Query: 148 -EYIRVEETMLF--LRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY---TNEIVA-- 199
E++ E L L+ L G V+ M G+ + ++E+++
Sbjct: 138 EEHVSKEAKALISRLQELMAGPG-HFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLV 196
Query: 200 --RHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHN 257
HEF E A G LD ++ +L LQ R K ++F + + EH
Sbjct: 197 KNTHEFVETASS----GNPLDFFPILRYLPNPALQ----RFKAFNQRFLWFLQKTVQEH- 247
Query: 258 ARRKGVDNYEAKDMMDVLLQ 277
+ D +D+ L +
Sbjct: 248 --YQDFDKNSVRDITGALFK 265
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 100/264 (37%), Gaps = 22/264 (8%)
Query: 36 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTH 95
PPGP WP+IG++ +G P+ ++ +S++YG ++Q++ + L
Sbjct: 13 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQ 72
Query: 96 DALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFT-------AKRLNSY- 147
F RP L + S GP W R++ L + A + Y
Sbjct: 73 GDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYL 132
Query: 148 -EYIRVEETMLF--LRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNEIVARHEFK 204
E++ E +L L+ L G V+ + G++Y + E
Sbjct: 133 EEHVSKEAEVLISTLQELMAGPG-HFNPYRYVVVSVTNVICAICFGRRYDHN---HQELL 188
Query: 205 EMADELFILGGVLDIG---DMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRK 261
+ + G V+ G D IP L +L + K L +KF + + EH K
Sbjct: 189 SLVNLNNNFGEVVGSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMVKEH---YK 244
Query: 262 GVDNYEAKDMMDVLLQLADDPTLE 285
+ +D+ D L++ + L+
Sbjct: 245 TFEKGHIRDITDSLIEHCQEKQLD 268
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 45/256 (17%)
Query: 47 NLNLIGPLPYRSIHA--------LSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDAL 98
+L L+G LP+ H L +KYGPI ++ ++A+ L
Sbjct: 15 SLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKD 74
Query: 99 FSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNS-YEYIRVEETML 157
FS RP++A + N I ++ G +W+ R++ + K + E I +E
Sbjct: 75 FSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEIST 134
Query: 158 FLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTN---EIVARHEFKEMADELFILG 214
L +G V+S + Y N E+ + E
Sbjct: 135 LCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE--------- 185
Query: 215 GVLD------IGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEA 268
G++D + D++PWL K ++L + ++ K ++NY+
Sbjct: 186 GIIDNLSKDSLVDLVPWLKIFP-----------NKTLEKLKSHVKIRNDLLNKILENYKE 234
Query: 269 K-------DMMDVLLQ 277
K +M+D L+Q
Sbjct: 235 KFRSDSITNMLDTLMQ 250
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 36 PPGPKPWPIIGNL---NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFL 92
PPGP P P++GNL + G L RS L EKYG + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICL--MELFTAKRLNSYEYI 150
FS R K+A Y I + G WR LR+ L M F + + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
+ EE + L +S G ++ +V GK++
Sbjct: 128 Q-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF 169
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 36 PPGPKPWPIIGNL---NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFL 92
PPGP P P++GNL + G L RS L EKYG + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICL--MELFTAKRLNSYEYI 150
FS R K+A Y I + G WR LR+ L M F + + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
+ EE + L +S G ++ +V GK++
Sbjct: 128 Q-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF 169
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 36 PPGPKPWPIIGNL---NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFL 92
PPGP P P++GNL + G L RS L EKYG + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICL--MELFTAKRLNSYEYI 150
FS R K+A Y I + G WR LR+ L M F + + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
+ EE + L +S G ++ +V GK++
Sbjct: 128 Q-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF 169
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 36 PPGPKPWPIIGNL---NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFL 92
PPGP P P++GNL + G L RS L EKYG + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICL--MELFTAKRLNSYEYI 150
FS R K+A Y I + G WR LR+ L M F + + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
+ EE + L +S G ++ +V GK++
Sbjct: 128 Q-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF 169
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 36 PPGPKPWPIIGNL---NLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFL 92
PPGP P P++GNL + G L RS L EKYG + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICL--MELFTAKRLNSYEYI 150
FS R K+A Y I + G WR LR+ L M F + + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
+ EE + L +S G ++ +V GK++
Sbjct: 128 Q-EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF 169
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 12/237 (5%)
Query: 44 IIGNLNLIGP-LPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYR 102
+ G L+L+ P LP + +L++K GP+ +L+ E + F+ R
Sbjct: 34 VPGFLHLLQPNLPIHLL-SLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGR 92
Query: 103 PKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNL 162
P++ + K + +I+ Y W+ +K+ L R +S E + T F +
Sbjct: 93 PQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERM 151
Query: 163 YESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNEIVARHEFKEMADELFILGG--VLDIG 220
+G ++ + G K + H F + +L + I
Sbjct: 152 RVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLV---HAFHDCVQDLMKTWDHWSIQIL 208
Query: 221 DMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAKDMMDVLLQ 277
DM+P+L F G + R+K + D + E +L H ++ + + +DM D +LQ
Sbjct: 209 DMVPFLRFFPNPG-LWRLKQAIENRDHMVEKQLRRH---KESMVAGQWRDMTDYMLQ 261
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNYS----NITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
I+ EE + L + G V+S +V G ++
Sbjct: 126 RIQ-EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNYS----NITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
I+ EE + L + G V+S +V G ++
Sbjct: 126 RIQ-EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNYS----NITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
I+ EE + L + G V+S +V G ++
Sbjct: 126 RIQ-EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNYS----NITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
I+ EE + L + G V+S +V G ++
Sbjct: 126 RIQ-EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNYS----NITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKY 193
I+ EE + L + G V+S +V G ++
Sbjct: 126 RIQ-EEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRF 169
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 14/168 (8%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P IGN L L Y S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 95 HDALFSYRPKLAAGKYTTFNY----SNITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
FS R G+ TF++ + +S G +QLR+ + L F + E
Sbjct: 72 QAEEFSGR-----GEQATFDWLFKGYGVAFSN-GERAKQLRRFSIATLRGFGVGKRGIEE 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNE 196
I+ EE + L + G V+S +V G ++ E
Sbjct: 126 RIQ-EEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYE 172
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 36 PPGPKPWPIIGNLNLIGPLPY-RSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P+IGN+ IG +S+ LS+ YGP+ L E + L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 95 HDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMEL 138
FS R + + I +S G W+++R+ LM L
Sbjct: 71 LGEEFSGRGIFPLAERANRGFG-IVFSN-GKKWKEIRRFSLMTL 112
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 36 PPGPKPWPIIGNLNLIGPLPY-RSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P+IGN+ IG +S+ LS+ YGP+ L E + L
Sbjct: 13 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 72
Query: 95 HDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMEL 138
FS R + + I +S G W+++R+ LM L
Sbjct: 73 LGEEFSGRGIFPLAERANRGFG-IVFSN-GKKWKEIRRFSLMTL 114
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 36 PPGPKPWPIIGNLNLIGPLPY-RSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P P+IGN+ I +S+ LS+ YGP+ L E+ + L
Sbjct: 13 PPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALID 72
Query: 95 HDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMEL 138
FS R + + I +S G W+++R+ LM L
Sbjct: 73 LGEEFSGRGHFPLAERANRGFG-IVFSN-GKRWKEIRRFSLMTL 114
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 36 PPGPKPWPIIGNLNL--IGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLK 93
PPGP P PIIGNL + +P +S L++++GP+ L + + L
Sbjct: 12 PPGPFPLPIIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 94 THDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMEL 138
+ FS R L A + I ++ GP W+ +R+ L L
Sbjct: 71 DYKDEFSGRGDLPA--FHAHRDRGIIFNN-GPTWKDIRRFSLTTL 112
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 105/271 (38%), Gaps = 35/271 (12%)
Query: 36 PPGPKPWPIIGN-LNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P+PIIGN L + +S+ SE YGP+ + E + L
Sbjct: 12 PPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVD 71
Query: 95 HDALFSYRPKLA----AGKYTTFNYSNITWSQYGPYWRQLRKICLMEL--FTAKRLNSYE 148
F+ R + K +SN W+++R+ LM L F + + +
Sbjct: 72 LGEEFAGRGSVPILEKVSKGLGIAFSN------AKTWKEMRRFSLMTLRNFGMGKRSIED 125
Query: 149 YIRVEETMLFLRNLYESSGXXXXXXXXXXXXXXEVMSRMVLGKKYTNEIVARHEFKEMAD 208
I+ EE + L +++ V+ ++ ++ + EF ++ +
Sbjct: 126 RIQ-EEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYK---DEEFLKLME 181
Query: 209 ELF----ILGGVLDIGDMIPWL----GFLDLQGYIKRM-KVLAKKFDRLFEYELDEHNAR 259
L +LG PWL F L Y + K L K D + + +++
Sbjct: 182 SLHENVELLG--------TPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEH 233
Query: 260 RKGVDNYEAKDMMDV-LLQLADDPTLEVKLE 289
+K +D +D +D L+++ + LE LE
Sbjct: 234 QKLLDVNNPRDFIDCFLIKMEQENNLEFTLE 264
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 36 PPGPKPWPIIGNLNLIGPLP-YRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKT 94
PPGP P PIIGN+ I +S S+ YGP+ + E + L
Sbjct: 12 PPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALID 71
Query: 95 HDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMEL 138
+ FS R + T I S G W+++R+ L L
Sbjct: 72 NGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTL 113
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 12/237 (5%)
Query: 54 LPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTF 113
LP+ + S+ YG I L ++ + L +F+ RP L T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT- 93
Query: 114 NYSNITWSQYGPYWRQLRKICLMEL-FTAKRLNSYEYIRVEETMLFLRNLYESSGXXXXX 172
+ S+YG W R++ + + S+E +EET F + G
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 173 XXXXXXXXXEVMSRMVLGKKYTNEIVARHEFKEMAD------ELFILGGVLDIGDMIPWL 226
+ + ++ G+++T E +F+ M + EL V + + PW+
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDT---DFQHMIELFSENVELAASASVF-LYNAFPWI 209
Query: 227 GFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAKDMMDVLLQLADDPT 283
G L + + + A +D L R+ + + +D + Q +DP+
Sbjct: 210 GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPS 266
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 86/237 (36%), Gaps = 12/237 (5%)
Query: 54 LPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKLAAGKYTTF 113
LP+ + S+ YG I L ++ + L +F+ RP L T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT- 93
Query: 114 NYSNITWSQYGPYWRQLRKICLMEL-FTAKRLNSYEYIRVEETMLFLRNLYESSGXXXXX 172
+ S+YG W R++ + + S+E +EET F + G
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 173 XXXXXXXXXEVMSRMVLGKKYTNEIVARHEFKEMAD------ELFILGGVLDIGDMIPWL 226
+ + ++ G+++T E +F+ M + EL V + + PW+
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDT---DFQHMIELFSENVELAASASVF-LYNAFPWI 209
Query: 227 GFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAKDMMDVLLQLADDPT 283
G L + + + A +D L R+ + + +D + Q +DP+
Sbjct: 210 GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPS 266
>pdb|2R6A|A Chain A, Crystal Form Bh1
pdb|2R6A|B Chain B, Crystal Form Bh1
pdb|2R6E|A Chain A, Crystal Form B2
pdb|2R6E|B Chain B, Crystal Form B2
pdb|2R6C|A Chain A, Crystal Form Bh2
pdb|2R6C|B Chain B, Crystal Form Bh2
pdb|2R6C|C Chain C, Crystal Form Bh2
pdb|2R6C|D Chain D, Crystal Form Bh2
pdb|2R6C|E Chain E, Crystal Form Bh2
pdb|2R6C|F Chain F, Crystal Form Bh2
pdb|2R6D|A Chain A, Crystal Form B1
pdb|2R6D|B Chain B, Crystal Form B1
pdb|2R6D|C Chain C, Crystal Form B1
pdb|2R6D|D Chain D, Crystal Form B1
pdb|2R6D|E Chain E, Crystal Form B1
pdb|2R6D|F Chain F, Crystal Form B1
pdb|4ESV|A Chain A, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|B Chain B, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|C Chain C, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|D Chain D, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|E Chain E, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|F Chain F, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|G Chain G, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|H Chain H, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|I Chain I, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|J Chain J, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|K Chain K, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|L Chain L, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
Length = 454
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 19/102 (18%)
Query: 194 TNEIVARHEFKEMADELFILGGVL---DIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFE 250
T E+ A + +E +GGV ++ D +P ++ I K + ++ R
Sbjct: 71 TAELAASEQLEE-------IGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIR--- 120
Query: 251 YELDEHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHS 292
A D Y +D +DVLL AD +EV +HS
Sbjct: 121 ------TATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHS 156
>pdb|3CLH|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs)from
Helicobacter Pylori
pdb|3CLH|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs)from
Helicobacter Pylori
Length = 343
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 204 KEMADELFILGGVLDIG-----DMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYEL 253
KE E F+ G + IG D+ LG L L+ Y +R++ L KKFD +F Y++
Sbjct: 239 KETDYERFLHGEAIAIGMRMANDLALSLGMLTLKEY-ERIENLLKKFDLIFHYKI 292
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,945,453
Number of Sequences: 62578
Number of extensions: 272267
Number of successful extensions: 642
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 33
length of query: 307
length of database: 14,973,337
effective HSP length: 99
effective length of query: 208
effective length of database: 8,778,115
effective search space: 1825847920
effective search space used: 1825847920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)