Query 043529
Match_columns 307
No_of_seqs 108 out of 1102
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 05:57:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043529.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043529hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-49 2.4E-54 364.8 30.6 271 33-307 25-301 (489)
2 PLN02971 tryptophan N-hydroxyl 100.0 4.1E-39 8.8E-44 303.5 31.1 276 31-307 54-342 (543)
3 PLN02687 flavonoid 3'-monooxyg 100.0 2.6E-38 5.6E-43 296.7 30.8 276 31-307 31-312 (517)
4 PLN00110 flavonoid 3',5'-hydro 100.0 2.9E-37 6.3E-42 288.4 31.8 291 14-307 10-304 (504)
5 PLN03234 cytochrome P450 83B1; 100.0 9.8E-37 2.1E-41 285.2 31.2 295 10-307 5-303 (499)
6 PLN03112 cytochrome P450 famil 100.0 1.5E-36 3.2E-41 284.9 32.2 278 29-307 27-311 (514)
7 PLN02183 ferulate 5-hydroxylas 100.0 1.1E-36 2.4E-41 285.7 30.7 275 29-307 31-319 (516)
8 PLN02966 cytochrome P450 83A1 100.0 3.7E-35 8E-40 274.6 31.6 283 23-307 18-304 (502)
9 PLN00168 Cytochrome P450; Prov 100.0 8.2E-35 1.8E-39 273.2 30.8 275 31-307 32-321 (519)
10 PLN02655 ent-kaurene oxidase 100.0 4.2E-35 9.2E-40 271.8 25.1 264 36-307 1-277 (466)
11 PLN03018 homomethionine N-hydr 100.0 1.4E-33 3.1E-38 264.6 30.6 276 31-307 37-329 (534)
12 PLN02394 trans-cinnamate 4-mon 100.0 4.7E-33 1E-37 260.6 30.3 278 25-307 21-308 (503)
13 PLN02290 cytokinin trans-hydro 100.0 1.4E-33 3.1E-38 264.8 23.9 266 34-307 42-331 (516)
14 PTZ00404 cytochrome P450; Prov 100.0 1.1E-32 2.4E-37 256.8 29.0 267 31-307 26-298 (482)
15 KOG0158 Cytochrome P450 CYP3/C 100.0 2.4E-32 5.1E-37 248.0 23.8 264 36-307 33-309 (499)
16 PLN02500 cytochrome P450 90B1 100.0 2.3E-32 5E-37 255.1 24.0 256 28-307 32-294 (490)
17 PLN02196 abscisic acid 8'-hydr 100.0 7.2E-30 1.6E-34 236.5 24.4 249 29-307 30-279 (463)
18 PLN02987 Cytochrome P450, fami 100.0 1.6E-29 3.5E-34 234.1 25.5 259 23-307 19-282 (472)
19 PF00067 p450: Cytochrome P450 100.0 4.3E-31 9.3E-36 243.3 13.8 268 36-307 1-277 (463)
20 PLN02774 brassinosteroid-6-oxi 100.0 1.5E-29 3.3E-34 234.5 24.1 251 31-307 28-279 (463)
21 PLN02302 ent-kaurenoic acid ox 100.0 6.4E-29 1.4E-33 232.1 28.1 256 31-307 39-302 (490)
22 KOG0157 Cytochrome P450 CYP4/C 100.0 1.2E-29 2.6E-34 236.0 21.9 264 32-307 33-306 (497)
23 PLN03141 3-epi-6-deoxocathaste 100.0 2.8E-29 6E-34 232.1 22.6 255 30-307 3-266 (452)
24 PLN02169 fatty acid (omega-1)- 100.0 7.1E-29 1.5E-33 231.7 24.7 264 36-307 33-316 (500)
25 PLN03195 fatty acid omega-hydr 100.0 3.8E-28 8.2E-33 228.1 23.5 261 36-307 32-307 (516)
26 PLN02936 epsilon-ring hydroxyl 100.0 9.4E-27 2E-31 217.1 22.0 262 34-307 12-293 (489)
27 PLN02738 carotene beta-ring hy 99.9 6.8E-26 1.5E-30 215.7 24.9 251 44-307 141-406 (633)
28 KOG0159 Cytochrome P450 CYP11/ 99.9 2.4E-24 5.1E-29 192.6 21.3 259 36-307 52-331 (519)
29 PLN02426 cytochrome P450, fami 99.9 2.4E-20 5.2E-25 174.3 24.2 247 41-307 48-308 (502)
30 PLN02648 allene oxide synthase 99.8 2.8E-19 6.1E-24 165.4 15.2 157 33-195 16-194 (480)
31 KOG0684 Cytochrome P450 [Secon 99.8 1.2E-16 2.7E-21 140.4 19.1 255 34-307 31-288 (486)
32 COG2124 CypX Cytochrome P450 [ 99.7 1.9E-16 4.1E-21 144.5 18.8 223 56-307 25-251 (411)
33 KOG0114 Predicted RNA-binding 75.5 12 0.00025 27.0 5.5 60 33-94 11-76 (124)
34 PF13893 RRM_5: RNA recognitio 62.5 22 0.00047 21.9 4.5 43 60-102 2-49 (56)
35 PLN03120 nucleic acid binding 56.1 44 0.00096 28.5 6.3 59 44-104 8-72 (260)
36 TIGR01661 ELAV_HUD_SF ELAV/HuD 55.2 34 0.00073 30.4 6.0 59 43-103 272-340 (352)
37 PF13625 Helicase_C_3: Helicas 52.3 25 0.00054 26.4 4.0 39 54-94 75-113 (129)
38 PF00076 RRM_1: RNA recognitio 52.3 42 0.0009 21.2 4.7 54 44-99 2-64 (70)
39 PLN03134 glycine-rich RNA-bind 48.1 57 0.0012 25.0 5.4 59 43-103 37-105 (144)
40 smart00362 RRM_2 RNA recogniti 46.4 69 0.0015 19.8 5.4 39 56-94 13-58 (72)
41 PF12273 RCR: Chitin synthesis 46.0 14 0.00029 27.9 1.7 16 11-26 8-23 (130)
42 cd01646 RT_Bac_retron_I RT_Bac 45.4 61 0.0013 25.1 5.4 56 32-93 51-107 (158)
43 PF07912 ERp29_N: ERp29, N-ter 42.8 1.2E+02 0.0025 22.7 6.0 44 60-103 71-126 (126)
44 KOG3653 Transforming growth fa 40.1 1.1E+02 0.0023 28.8 6.5 37 65-101 222-258 (534)
45 PF11829 DUF3349: Protein of u 37.3 88 0.0019 22.3 4.5 53 246-306 2-54 (96)
46 PF01102 Glycophorin_A: Glycop 36.3 55 0.0012 24.4 3.5 10 21-30 84-93 (122)
47 smart00360 RRM RNA recognition 36.2 1E+02 0.0022 18.8 5.2 38 57-94 11-57 (71)
48 cd00590 RRM RRM (RNA recogniti 28.1 1.5E+02 0.0033 18.2 5.7 40 56-95 13-60 (74)
49 PF15050 SCIMP: SCIMP protein 28.0 1.1E+02 0.0023 22.7 3.7 14 35-48 69-83 (133)
50 PF15330 SIT: SHP2-interacting 27.3 1.6E+02 0.0035 21.4 4.6 11 41-51 45-55 (107)
51 PF14605 Nup35_RRM_2: Nup53/35 23.9 1.9E+02 0.004 17.8 4.3 34 58-91 16-52 (53)
52 PF00745 GlutR_dimer: Glutamyl 23.2 2.7E+02 0.0057 19.4 5.9 83 126-212 16-99 (101)
53 PF14259 RRM_6: RNA recognitio 23.0 1.2E+02 0.0025 19.3 3.1 50 45-96 3-60 (70)
54 PHA03049 IMV membrane protein; 22.8 2.3E+02 0.005 18.5 4.4 13 36-48 33-45 (68)
55 PHA01327 hypothetical protein 22.2 39 0.00085 19.6 0.5 20 116-135 11-30 (49)
56 TIGR01659 sex-lethal sex-letha 22.2 2.4E+02 0.0053 25.3 5.8 50 43-94 196-254 (346)
57 KOG4241 Mitochondrial ribosoma 22.1 72 0.0016 26.1 2.1 29 65-93 135-163 (245)
58 PF05084 GRA6: Granule antigen 21.1 1.9E+02 0.0041 22.7 4.1 14 34-47 177-193 (215)
59 PF11027 DUF2615: Protein of u 20.5 2E+02 0.0042 20.8 3.9 20 8-27 56-75 (103)
60 PF09061 Stirrup: Stirrup; In 20.3 2.2E+02 0.0047 18.5 3.6 26 56-82 9-34 (79)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-49 Score=364.78 Aligned_cols=271 Identities=38% Similarity=0.624 Sum_probs=234.8
Q ss_pred CCCCCCCCCCCcccccccCCCC-chHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCc-Cccce
Q 043529 33 LNLPPGPKPWPIIGNLNLIGPL-PYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKL-AAGKY 110 (307)
Q Consensus 33 ~~lpPgP~~lPilGn~~~l~~~-~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~-~~~~~ 110 (307)
.++||||+|||+|||++++... +|+.+.+|+++|||+|++|+|..|+|||+|+++|||+|++++..|++||.. ...+.
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~ 104 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY 104 (489)
T ss_pred CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence 7899999999999999999654 999999999999999999999999999999999999999999999999972 24466
Q ss_pred eecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc-CCceechHHHHHHHHHHHHHHHh
Q 043529 111 TTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS-GKPIILKDNLLDLNLEVMSRMVL 189 (307)
Q Consensus 111 ~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~t~~ii~~~~f 189 (307)
+.+++.++.+++||+.||.+||++...+++.++++++..+..+|++.+++.+.+.. ++++|+.+.+..++.||||+++|
T Consensus 105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f 184 (489)
T KOG0156|consen 105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF 184 (489)
T ss_pred hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence 67677889999999999999999999999999999999999999999999999722 37999999999999999999999
Q ss_pred cCccccch-hhHHHHHHHHHHHHHhccCCccccccc-cccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 043529 190 GKKYTNEI-VARHEFKEMADELFILGGVLDIGDMIP-WLGFLD-LQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNY 266 (307)
Q Consensus 190 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 266 (307)
|.++...+ +...++.+++.+.+...+.+++.+++| ++++++ ..+..++.+....+++.+++++|++|++.. +. +.
T Consensus 185 G~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~-~~ 262 (489)
T KOG0156|consen 185 GRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD-EE 262 (489)
T ss_pred CCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc-CC
Confidence 99998744 445668888999998888888899999 677765 236677777777889999999999998865 11 22
Q ss_pred CCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 267 EAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 267 ~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+||+|+||+++++++.+ .+|+++|++.|.||++||.||
T Consensus 263 -~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGtdT 301 (489)
T KOG0156|consen 263 -GRDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGTDT 301 (489)
T ss_pred -CCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhcccch
Confidence 389999999965543222 299999999999999999997
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.1e-39 Score=303.48 Aligned_cols=276 Identities=23% Similarity=0.322 Sum_probs=205.7
Q ss_pred CCCCCCCCCCCCCcccccccC-CCC-chHHHHHHHHhhC-CceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCc
Q 043529 31 RELNLPPGPKPWPIIGNLNLI-GPL-PYRSIHALSEKYG-PIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAA 107 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l-~~~-~~~~~~~~~~kYG-~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~ 107 (307)
++.++||||+++|++||++++ .+. .+..+.+|+++|| ++|++++|+.|+||++||+++||+|++++..|++||....
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~ 133 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA 133 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence 445789999999999999876 332 4678899999999 8999999999999999999999999999999999986444
Q ss_pred cceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHH
Q 043529 108 GKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMS 185 (307)
Q Consensus 108 ~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~ 185 (307)
.+.+..+.+++++..+|+.||++||+++.+++++..++.+.++++++++.+++.+.+.. ++++|+.+.+.++|+++++
T Consensus 134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~ 213 (543)
T PLN02971 134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK 213 (543)
T ss_pred hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence 33333333456888899999999999976777777777888999999999998887643 5689999999999999999
Q ss_pred HHHhcCccccc-----hhhHHHHHHHHHHHHHhc---cCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 043529 186 RMVLGKKYTNE-----IVARHEFKEMADELFILG---GVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHN 257 (307)
Q Consensus 186 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 257 (307)
+++||.++... +....++.+.++.++... ....+.+++|++++++..++.+..+...+.+++++.++|++++
T Consensus 214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 293 (543)
T PLN02971 214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI 293 (543)
T ss_pred HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999986321 101112222233333221 1123457788877654445555556567778889999999887
Q ss_pred hhccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 258 ARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 258 ~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
+...........|++|.||+..++ ++...+++++|+++|.++++|||||
T Consensus 294 ~~~~~~~~~~~~d~l~~ll~~~~~-~~~~~ls~~~i~~~~~~l~~AG~dT 342 (543)
T PLN02971 294 KMWREGKRTQIEDFLDIFISIKDE-AGQPLLTADEIKPTIKELVMAAPDN 342 (543)
T ss_pred HHHhccCCCCCcCHHHHHHhhhcc-cCCCCCCHHHHHHhHHHHheeccch
Confidence 643211111247999999984322 1122499999999999999999996
No 3
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=2.6e-38 Score=296.71 Aligned_cols=276 Identities=36% Similarity=0.670 Sum_probs=215.2
Q ss_pred CCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccce
Q 043529 31 RELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKY 110 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~ 110 (307)
+..++||||.++|++||++++..+++..+.+|+++||++|++++|+.|+||++||++++++|+++...|++||.....+.
T Consensus 31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~ 110 (517)
T PLN02687 31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH 110 (517)
T ss_pred CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence 34467999999999999988765688999999999999999999999999999999999999988889999986544443
Q ss_pred eecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc-CCceechHHHHHHHHHHHHHHHh
Q 043529 111 TTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS-GKPIILKDNLLDLNLEVMSRMVL 189 (307)
Q Consensus 111 ~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~t~~ii~~~~f 189 (307)
+...+++++++.+|+.||++||+++.++|+.++++.+.+++++++..+++.|.+.. ++++|+.+.+..+++++++.++|
T Consensus 111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~f 190 (517)
T PLN02687 111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMV 190 (517)
T ss_pred hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHh
Confidence 33333567788889999999999965789999999999999999999999997643 57899999999999999999999
Q ss_pred cCccccch--hhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 043529 190 GKKYTNEI--VARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYE 267 (307)
Q Consensus 190 G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 267 (307)
|.++...+ .....+.+.+..++...+...+.+++|++++++..+..++..+..+.+++++..+|+++++..+. .+..
T Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~ 269 (517)
T PLN02687 191 GRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-GSEE 269 (517)
T ss_pred CccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cCcc
Confidence 99864321 22345666666655543333334677876665433334455666778888999999998765421 1123
Q ss_pred CCCHHHHHhhhcCCC---CccccCchHHHHHHHHHHhhccCCC
Q 043529 268 AKDMMDVLLQLADDP---TLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 268 ~~d~ld~ll~~~~~~---~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
..|+++.|++...++ ..+..+|+++|.+++.++++|||||
T Consensus 270 ~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eT 312 (517)
T PLN02687 270 HKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDT 312 (517)
T ss_pred cccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCc
Confidence 579999999843321 1134699999999999999999997
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=2.9e-37 Score=288.40 Aligned_cols=291 Identities=32% Similarity=0.566 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHhh-cCCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHH
Q 043529 14 AWLATLALILLSLRLR-RRELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFL 92 (307)
Q Consensus 14 ~~~~~~~~~~l~~~~~-~~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl 92 (307)
..++.++..|+.++.. .+..++||||+++|++||++.+...++..+.+|+++||++|++++|+.|+|+++||++++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl 89 (504)
T PLN00110 10 ATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFL 89 (504)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHH
Confidence 3344455666766653 455688999999999999987765678899999999999999999999999999999999999
Q ss_pred HhcCcccCCCCCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCce
Q 043529 93 KTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPI 170 (307)
Q Consensus 93 ~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~ 170 (307)
+++.+.|++||..........+.++++++.+|+.||++||+++.+.|+++.++.+.+.+.+++..+++.+.+.. |+++
T Consensus 90 ~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~ 169 (504)
T PLN00110 90 KTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPV 169 (504)
T ss_pred HhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcE
Confidence 98888999998643322222233467788889999999999975679999999999999999999999987643 6789
Q ss_pred echHHHHHHHHHHHHHHHhcCccc-cchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHH
Q 043529 171 ILKDNLLDLNLEVMSRMVLGKKYT-NEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLF 249 (307)
Q Consensus 171 ~~~~~~~~~t~~ii~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~ 249 (307)
++.+.+..+++++|+.++||.++. ..+....++.+.+...+.......+.+++|++++++..++.++.++..+.+.+++
T Consensus 170 ~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~ 249 (504)
T PLN00110 170 VVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLL 249 (504)
T ss_pred eHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999862 2112234566666655544333334567887666543344455556677788888
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 250 EYELDEHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 250 ~~~i~~~~~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.++|+++++... ......|+++.|++...++ .+..+++++|.+++.++++|||||
T Consensus 250 ~~~i~~~~~~~~--~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dT 304 (504)
T PLN00110 250 TRMIEEHTASAH--ERKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDT 304 (504)
T ss_pred HHHHHHHHhhcc--ccccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccc
Confidence 888888876432 1122469999999743222 234699999999999999999996
No 5
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=9.8e-37 Score=285.20 Aligned_cols=295 Identities=31% Similarity=0.541 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccccCC-CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHH
Q 043529 10 YYLAAWLATLALILLSLRLRRRELNLPPGPKPWPIIGNLNLIG-PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMA 88 (307)
Q Consensus 10 ~~~~~~~~~~~~~~l~~~~~~~~~~lpPgP~~lPilGn~~~l~-~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~ 88 (307)
++++.++++++++.+. +..++..+.||||+++|++||++++. .+++..+.+|+++||++|++++|+.++||++|||++
T Consensus 5 ~~~~~l~~~~~~~~~~-~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~ 83 (499)
T PLN03234 5 LIIAALVAAAAFFFLR-STTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELA 83 (499)
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHH
Confidence 3444445555544333 33444557899999999999998774 367888999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCCCCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--
Q 043529 89 EAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS-- 166 (307)
Q Consensus 89 ~evl~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~-- 166 (307)
++++.+++..|.+||.......+...+....+..+|+.|+.+||.+..++|+++++.++.+.++++++.+++.+.+..
T Consensus 84 ~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~ 163 (499)
T PLN03234 84 KELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQ 163 (499)
T ss_pred HHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccC
Confidence 999998888999998543322222222344456678999999998656889999999999999999999999997643
Q ss_pred CCceechHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccc-cccHHHHHHHHHHHH
Q 043529 167 GKPIILKDNLLDLNLEVMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKF 245 (307)
Q Consensus 167 ~~~~~~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~ 245 (307)
++++|+.+.+.+++++++++++||.+++..+.+..++.+.+++.+...+.....+.+|++++++ +.++.++..++.+++
T Consensus 164 ~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~ 243 (499)
T PLN03234 164 SGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKEL 243 (499)
T ss_pred CCeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHH
Confidence 5789999999999999999999999886543233445554554444333323445667654432 233445667788889
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 246 DRLFEYELDEHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 246 ~~~~~~~i~~~~~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
+.++.++|+++++... ......|+++.|++...++..+..+++++|.+++.++++|||||
T Consensus 244 ~~~~~~~i~~~~~~~~--~~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dT 303 (499)
T PLN03234 244 DTYLQELLDETLDPNR--PKQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDT 303 (499)
T ss_pred HHHHHHHHHHHHhhcc--cCCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhh
Confidence 9999999998765431 11235799999997433222123699999999999999999997
No 6
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=284.90 Aligned_cols=278 Identities=33% Similarity=0.633 Sum_probs=212.4
Q ss_pred hcCCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCcc
Q 043529 29 RRRELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAG 108 (307)
Q Consensus 29 ~~~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~ 108 (307)
+++..++||||+++|++||++++...++..+.+|+++||++|++++|+.|+|+++||+++++++.++...|++||.....
T Consensus 27 ~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~ 106 (514)
T PLN03112 27 MRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAA 106 (514)
T ss_pred ccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccc
Confidence 44555789999999999999877666888999999999999999999999999999999999999888899998864322
Q ss_pred ceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHHH
Q 043529 109 KYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMSR 186 (307)
Q Consensus 109 ~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~~ 186 (307)
.....+.+.+++..+|+.|+.+||++..++|+.++++.+.+.+.++++.+++.+.+.. ++++|+.+.+.++++++++.
T Consensus 107 ~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~ 186 (514)
T PLN03112 107 VHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTR 186 (514)
T ss_pred eeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHH
Confidence 2222333456677789999999999766789999999999999999999999886543 57899999999999999999
Q ss_pred HHhcCccccch----hhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 043529 187 MVLGKKYTNEI----VARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKG 262 (307)
Q Consensus 187 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (307)
++||.++.... ....++.+.+..++.......+.+++|++++++..+..++.....+.+.+++..+|+++++..+.
T Consensus 187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 266 (514)
T PLN03112 187 MLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSG 266 (514)
T ss_pred HHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999863211 12345666666555443322345677877665323334555667778888999999988765421
Q ss_pred CC-CCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 263 VD-NYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 263 ~~-~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.. +....|+++.+++...+ .++..+++++|.+++.++++|||||
T Consensus 267 ~~~~~~~~d~l~~ll~~~~~-~~~~~l~~~~i~~~~~~~~~AG~dT 311 (514)
T PLN03112 267 KLPGGKDMDFVDVLLSLPGE-NGKEHMDDVEIKALMQDMIAAATDT 311 (514)
T ss_pred cccCCccchHHHHHHHhhcc-ccccCCCHHHHHHHHHHHhcccccc
Confidence 11 12346999999984322 2223599999999999999999997
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.1e-36 Score=285.66 Aligned_cols=275 Identities=33% Similarity=0.625 Sum_probs=207.6
Q ss_pred hcCCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCcc
Q 043529 29 RRRELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAG 108 (307)
Q Consensus 29 ~~~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~ 108 (307)
.+++.++||||+++|++||++++...++..+.+|+++||++|++++|+.|+|+++||++++++|.+++..|++||.....
T Consensus 31 ~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 110 (516)
T PLN02183 31 LRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI 110 (516)
T ss_pred ccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence 34456889999999999999877555677899999999999999999999999999999999999988899999864333
Q ss_pred ceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHHHHH
Q 043529 109 KYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEVMSRMV 188 (307)
Q Consensus 109 ~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ii~~~~ 188 (307)
..+..+.++++++.+|+.|+++||++..++|+.+.++.+.+++ +++..+++.+.+..|+++|+.+.+.++++++++.++
T Consensus 111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~ 189 (516)
T PLN02183 111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAA 189 (516)
T ss_pred hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHh
Confidence 3333233467888899999999999656889999998888865 689999999976447789999999999999999999
Q ss_pred hcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----
Q 043529 189 LGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGV----- 263 (307)
Q Consensus 189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 263 (307)
||.+.+.. ..++.+.+..+.......+..+++|++++++..+..++..+..+.+.+++..+|+++++.....
T Consensus 190 fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 266 (516)
T PLN02183 190 FGSSSNEG---QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADND 266 (516)
T ss_pred hcCcccch---HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence 99877532 2345555555444433334456778776552223345556677788888888888876543211
Q ss_pred CCCCCCCHHHHHhhhcCCC---------CccccCchHHHHHHHHHHhhccCCC
Q 043529 264 DNYEAKDMMDVLLQLADDP---------TLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 264 ~~~~~~d~ld~ll~~~~~~---------~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+....|+++.+++...++ ..+..+++++|.+++.++++|||||
T Consensus 267 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dT 319 (516)
T PLN02183 267 SEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTET 319 (516)
T ss_pred cccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhh
Confidence 0112469999999743211 0123599999999999999999996
No 8
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=3.7e-35 Score=274.55 Aligned_cols=283 Identities=27% Similarity=0.490 Sum_probs=206.4
Q ss_pred HHHHHhhcCCCCCCCCCCCCCcccccccC-CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCC
Q 043529 23 LLSLRLRRRELNLPPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSY 101 (307)
Q Consensus 23 ~l~~~~~~~~~~lpPgP~~lPilGn~~~l-~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~ 101 (307)
++..+..++..++||||+++|++||++++ ..+++..+.+|+++||++|++++|+.|+|+++||++++++|.+++..|.+
T Consensus 18 ~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~ 97 (502)
T PLN02966 18 FLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFAD 97 (502)
T ss_pred HHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccC
Confidence 33444445556789999999999999877 44688899999999999999999999999999999999999988888988
Q ss_pred CCCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHH
Q 043529 102 RPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDL 179 (307)
Q Consensus 102 R~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~ 179 (307)
|+..........+.+.+.+..+|+.|+.+||++..++|+++++..+.+.+++++..+++.|.+.. ++++|+.+.+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~ 177 (502)
T PLN02966 98 RPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTF 177 (502)
T ss_pred CCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHH
Confidence 87533322222232344566679999999999556889999999999999999999999997643 5689999999999
Q ss_pred HHHHHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043529 180 NLEVMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKFDRLFEYELDEHNA 258 (307)
Q Consensus 180 t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 258 (307)
|+++++.++||.+++..+....++.+.+.............+++|+++.++ +.++.+......++..+++.+.+++..+
T Consensus 178 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 257 (502)
T PLN02966 178 TNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLD 257 (502)
T ss_pred HHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999886433223345554444443333333345666543332 1223233344555667777777777654
Q ss_pred hccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 259 RRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 259 ~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
... ...+..|+++.|++..+++..+..++++++.+++.++++|||||
T Consensus 258 ~~~--~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eT 304 (502)
T PLN02966 258 PKR--VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDT 304 (502)
T ss_pred ccc--cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccc
Confidence 321 11224699999997543321123589999999999999999997
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=8.2e-35 Score=273.19 Aligned_cols=275 Identities=19% Similarity=0.284 Sum_probs=199.4
Q ss_pred CCCCCCCCCCCCCcccccccCC---CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCc
Q 043529 31 RELNLPPGPKPWPIIGNLNLIG---PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAA 107 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l~---~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~ 107 (307)
+..++||||+++|++||++++. ..++..+.+|+++||++|++++|+.|+|+++|||+++++|++++..|++||....
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~ 111 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS 111 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence 4457899999999999987552 3478889999999999999999999999999999999999999999999986433
Q ss_pred cceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHH
Q 043529 108 GKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMS 185 (307)
Q Consensus 108 ~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~ 185 (307)
...+..+.....+..+|+.||++||.+..++|+.++++.+.+.+.++++.+++.|.+.. ++++|+.+.+..++.++++
T Consensus 112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~ 191 (519)
T PLN00168 112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV 191 (519)
T ss_pred hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 33222221222334689999999985556899999999999999999999999998754 3468899999999999999
Q ss_pred HHHhcCccccchhhHHHHHHHHHHHHHhc-cCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccC--
Q 043529 186 RMVLGKKYTNEIVARHEFKEMADELFILG-GVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKG-- 262 (307)
Q Consensus 186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 262 (307)
.++||.+++.. ....+......+.... ...++.+++|++.+....+..++..+..+++.+++..+|+++++....
T Consensus 192 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 269 (519)
T PLN00168 192 LMCFGERLDEP--AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLG 269 (519)
T ss_pred HHHcCCCcChh--hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999987632 1222333333222211 122345667755332111222344556778888999999988764310
Q ss_pred CCC-------CCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 263 VDN-------YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 263 ~~~-------~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
..+ ....|++|.|++...+++++..+|+++|++++.++++|||||
T Consensus 270 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dT 321 (519)
T PLN00168 270 QGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDT 321 (519)
T ss_pred ccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchH
Confidence 000 014699999997432222234699999999999999999996
No 10
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=4.2e-35 Score=271.75 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=199.3
Q ss_pred CCCCCCCCcccccccCC-CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccceeecC
Q 043529 36 PPGPKPWPIIGNLNLIG-PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKYTTFN 114 (307)
Q Consensus 36 pPgP~~lPilGn~~~l~-~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~~~~~ 114 (307)
||||+|+|++||++++. +.++..+.+|+++||++|++++|+.++|+|+||+++|++|+++...|++|+.......+..+
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 79999999999998874 55889999999999999999999999999999999999999999999999754333323322
Q ss_pred CcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhh----cCCceechHHHHHHHHHHHHHHHhc
Q 043529 115 YSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES----SGKPIILKDNLLDLNLEVMSRMVLG 190 (307)
Q Consensus 115 ~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~t~~ii~~~~fG 190 (307)
...+.++.+|+.||++||.+..++++..+++.+.+.++++++.+++.+.+. .++++|+.+.++++|+++++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 223445567999999999887778888888888999999999999888653 2568999999999999999999999
Q ss_pred Cccccch-hh-------HHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 043529 191 KKYTNEI-VA-------RHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKG 262 (307)
Q Consensus 191 ~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (307)
.++...+ .. ...+.+.+..++.......+.+++|+++++|...+.+..........+++..+|++++++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 240 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR 240 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9876421 10 122333333444333222335678887776543344444444455667888888888765421
Q ss_pred CCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 263 VDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 263 ~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
+..+.|++|.|++.. ..+|+++|.+++.++++||+||
T Consensus 241 --~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dt 277 (466)
T PLN02655 241 --GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADT 277 (466)
T ss_pred --CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHH
Confidence 223569999999832 2489999999999999999986
No 11
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.4e-33 Score=264.60 Aligned_cols=276 Identities=21% Similarity=0.291 Sum_probs=192.9
Q ss_pred CCCCCCCCCCCCCcccccccC-CCCch-HHHHHHHHhh-CCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCc
Q 043529 31 RELNLPPGPKPWPIIGNLNLI-GPLPY-RSIHALSEKY-GPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAA 107 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l-~~~~~-~~~~~~~~kY-G~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~ 107 (307)
++.++||||+++|++||++++ .+.++ ..+.++.++| |+||++++|+.|+|+|+|||+++|+|+++++.|++||....
T Consensus 37 ~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~ 116 (534)
T PLN03018 37 RSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI 116 (534)
T ss_pred CCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence 334579999999999999886 33332 2355666665 79999999999999999999999999999989999986544
Q ss_pred cceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHH
Q 043529 108 GKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMS 185 (307)
Q Consensus 108 ~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~ 185 (307)
.+.+..+..+++++.+|+.||.+||+++..+++.+..+.+..+++.++..+++.+.+.. ++++|+.+.+.++++++++
T Consensus 117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~ 196 (534)
T PLN03018 117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM 196 (534)
T ss_pred hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence 44343333357777779999999999975445666666777777778999999998643 4679999999999999999
Q ss_pred HHHhcCccccch-------hhHHHHHHHHHHHHHh---ccCCccccccc-cccccccccHHHHHHHHHHHHHHHHHHHHH
Q 043529 186 RMVLGKKYTNEI-------VARHEFKEMADELFIL---GGVLDIGDMIP-WLGFLDLQGYIKRMKVLAKKFDRLFEYELD 254 (307)
Q Consensus 186 ~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (307)
+++||.++...+ .....+...+..+... .......+++| |+++++..++.++.....+.+++++.++|+
T Consensus 197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 276 (534)
T PLN03018 197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID 276 (534)
T ss_pred HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999874311 1111122222222221 11112235555 555332234444455556678888999999
Q ss_pred HHHhhccCCCC-CCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 255 EHNARRKGVDN-YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 255 ~~~~~~~~~~~-~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
++++......+ ....|+++.|++...+ .+...+|+++|++++.++++||+||
T Consensus 277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~~ls~~~i~~~~~~~~~aG~dT 329 (534)
T PLN03018 277 ERVELWREKGGKAAVEDWLDTFITLKDQ-NGKYLVTPDEIKAQCVEFCIAAIDN 329 (534)
T ss_pred HHHHHhhhccCCCCcccHHHHHHHhhcc-cCCCCCCHHHHHHHHHHHHHHhhhH
Confidence 88764321111 1246999999974322 1122499999999999999999986
No 12
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=4.7e-33 Score=260.63 Aligned_cols=278 Identities=25% Similarity=0.405 Sum_probs=196.2
Q ss_pred HHHhhcCCCCCCCCCCCCCcccccccCCC-CchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCC
Q 043529 25 SLRLRRRELNLPPGPKPWPIIGNLNLIGP-LPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRP 103 (307)
Q Consensus 25 ~~~~~~~~~~lpPgP~~lPilGn~~~l~~-~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~ 103 (307)
..+...++.+.||||+++|++||++++.. ..+..+.+|+++||++|++++|+.|+|+++|||.+++++.+++..|.+|+
T Consensus 21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~ 100 (503)
T PLN02394 21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT 100 (503)
T ss_pred HHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCC
Confidence 33334455678999999999999987743 35788999999999999999999999999999999999998888899887
Q ss_pred CcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc---CCceechHHHHHHH
Q 043529 104 KLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS---GKPIILKDNLLDLN 180 (307)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~t 180 (307)
.......+...+++++++.+|++|+++||.+..++|+++.++.+.+.++++++.+++.|.+.. ++.+++.+.+.+++
T Consensus 101 ~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~ 180 (503)
T PLN02394 101 RNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM 180 (503)
T ss_pred CcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence 543333333223456777889999999999866889999899999999999999999997643 34689999999999
Q ss_pred HHHHHHHHhcCccccch-hhHHHHHHHHHHHHHhccC--CccccccccccccccccHHHHHHHHHHHHHH-HHHHHHHHH
Q 043529 181 LEVMSRMVLGKKYTNEI-VARHEFKEMADELFILGGV--LDIGDMIPWLGFLDLQGYIKRMKVLAKKFDR-LFEYELDEH 256 (307)
Q Consensus 181 ~~ii~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 256 (307)
+++++.++||.+++..+ ....++............. .+..+++|++... ..++.+........... +...+++++
T Consensus 181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (503)
T PLN02394 181 YNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDER 259 (503)
T ss_pred HHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986432 1122233332322222211 1233456654432 12222222222222222 334467776
Q ss_pred HhhccCC--CCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 257 NARRKGV--DNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 257 ~~~~~~~--~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
++..+.. ++...+|+++.|++..++ ..++++++...+.++++|||||
T Consensus 260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dT 308 (503)
T PLN02394 260 KKLMSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIET 308 (503)
T ss_pred HHHhhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhh
Confidence 6533110 112357999999985332 2489999999999999999996
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.4e-33 Score=264.82 Aligned_cols=266 Identities=19% Similarity=0.222 Sum_probs=190.2
Q ss_pred CCCCCCCCCCcccccccCCC-------------------CchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHh
Q 043529 34 NLPPGPKPWPIIGNLNLIGP-------------------LPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKT 94 (307)
Q Consensus 34 ~lpPgP~~lPilGn~~~l~~-------------------~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~ 94 (307)
+-||||+|+|++||++++.. .....+.+|+++|||+|++|+|+.|+|+++||++++++|.+
T Consensus 42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~ 121 (516)
T PLN02290 42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTK 121 (516)
T ss_pred cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhc
Confidence 34899999999999877531 12235688999999999999999999999999999999997
Q ss_pred cCcccCCCCCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--C-Ccee
Q 043529 95 HDALFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--G-KPII 171 (307)
Q Consensus 95 ~~~~f~~R~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~-~~~~ 171 (307)
+ ..|.+|+........... +++++..+|+.||++||+++ +.|+.++++.+.+.+.++++.+++.|.+.. + .++|
T Consensus 122 ~-~~~~~r~~~~~~~~~~~~-g~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd 198 (516)
T PLN02290 122 Y-NTVTGKSWLQQQGTKHFI-GRGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE 198 (516)
T ss_pred C-CCCCCCcchhhhHHHHHh-cCCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 6 457777642111000001 23355568999999999985 889999999999999999999999998643 3 4799
Q ss_pred chHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHH
Q 043529 172 LKDNLLDLNLEVMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEY 251 (307)
Q Consensus 172 ~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (307)
+.+.+.++++++++.++||.++...+ ++.+.++.+............+|+++++| .++.++.+...+.+..++.+
T Consensus 199 ~~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~ 273 (516)
T PLN02290 199 IGEYMTRLTADIISRTEFDSSYEKGK----QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLME 273 (516)
T ss_pred hHHHHHHHHHHHHHHHHcCCccccch----HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875432 12222222222111111122456555553 23344556667788899999
Q ss_pred HHHHHHhhccCC-CCCCCCCHHHHHhhhcCCC-CccccCchHHHHHHHHHHhhccCCC
Q 043529 252 ELDEHNARRKGV-DNYEAKDMMDVLLQLADDP-TLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 252 ~i~~~~~~~~~~-~~~~~~d~ld~ll~~~~~~-~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.|+++++..+.. ++....|+++.+++...+. .++..+++++|.+++.++++|||||
T Consensus 274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dT 331 (516)
T PLN02290 274 IIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHET 331 (516)
T ss_pred HHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHH
Confidence 999987654211 1123579999999743321 1233589999999999999999986
No 14
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.1e-32 Score=256.79 Aligned_cols=267 Identities=21% Similarity=0.278 Sum_probs=194.4
Q ss_pred CCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccce
Q 043529 31 RELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKY 110 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~ 110 (307)
.+.+.+|||+++|++||++.+...++..+.+|.++|||+|++++|+.++|+++||+++++++.++...|.+|+.......
T Consensus 26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~ 105 (482)
T PTZ00404 26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH 105 (482)
T ss_pred ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence 33456899999999999988766789999999999999999999999999999999999999988778988875433221
Q ss_pred eecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHHHHH
Q 043529 111 TTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMSRMV 188 (307)
Q Consensus 111 ~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~~~~ 188 (307)
... +.++++.+|+.|+++||+++ +.|+++.++.+.+.+.+++..+++.|.+.. ++.+|+.+.+.++++++++.++
T Consensus 106 ~~~--~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~ 182 (482)
T PTZ00404 106 GTF--YHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYI 182 (482)
T ss_pred ecc--CCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHH
Confidence 111 24456678999999999995 788999999999999999999999997643 5679999999999999999999
Q ss_pred hcCccccch----hhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 043529 189 LGKKYTNEI----VARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVD 264 (307)
Q Consensus 189 fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 264 (307)
||.++...+ .....+.+.+..++.........+++|++... ...+.....+..+.+.+++.+.+++++++.+
T Consensus 183 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--- 258 (482)
T PTZ00404 183 FNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID--- 258 (482)
T ss_pred hccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---
Confidence 999876421 11234555555555544332223333433221 1112222234566777788888877765432
Q ss_pred CCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 265 NYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 265 ~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
...+.|+++.|++...+ ....+.++|++++.++++|||||
T Consensus 259 ~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~AG~dT 298 (482)
T PTZ00404 259 PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFLAGVDT 298 (482)
T ss_pred CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHHhccch
Confidence 12357999999984211 11122345899999999999996
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-32 Score=247.97 Aligned_cols=264 Identities=22% Similarity=0.288 Sum_probs=183.9
Q ss_pred CCCCCCCCcccccccC--CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccceeec
Q 043529 36 PPGPKPWPIIGNLNLI--GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKYTTF 113 (307)
Q Consensus 36 pPgP~~lPilGn~~~l--~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~~~~ 113 (307)
.|||+|+|++||+..+ .+.+.....+.+.+|||+++++.|.+|+++|+|||+||+|++++.++|.+|.+....+.-..
T Consensus 33 i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~~ 112 (499)
T KOG0158|consen 33 IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPEDP 112 (499)
T ss_pred CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCCc
Confidence 6999999999999865 22234444444455599999999999999999999999999999999999542222221111
Q ss_pred CCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHHHHHhcC
Q 043529 114 NYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMSRMVLGK 191 (307)
Q Consensus 114 ~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~~~~fG~ 191 (307)
-....+|...|++||++|..+ +|+|+..+++.+.+.+++.++++++.+.+.. ++.+++.+.+.++|.+||.+++||.
T Consensus 113 l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~ 191 (499)
T KOG0158|consen 113 LSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGL 191 (499)
T ss_pred ccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhccc
Confidence 112557778999999999998 5999999999999999999999999998854 2478899999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHh-ccCCc----cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 043529 192 KYTNEIVARHEFKEMADELFIL-GGVLD----IGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNY 266 (307)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 266 (307)
+.++......++...-...+.. ...+. ....+|.+... .+..........++.+++.+..+.+. ..+.
T Consensus 192 ~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~~~~~~~~~~~~~~~v~~~v~~R~-~~~~ 264 (499)
T KOG0158|consen 192 DANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRVKLFPEDVTDFFRKLVNSRVEQRE-KENI 264 (499)
T ss_pred chhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhcccChHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 9876542334555433333322 11111 11223322111 11122233444445555555444332 2234
Q ss_pred CCCCHHHHHhhhcCCC--C-c-cccCchHHHHHHHHHHhhccCCC
Q 043529 267 EAKDMMDVLLQLADDP--T-L-EVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 267 ~~~d~ld~ll~~~~~~--~-~-~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+.||+|.|++.++++ + . +..+|.++|+++|..+++||+||
T Consensus 265 ~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeT 309 (499)
T KOG0158|consen 265 ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFET 309 (499)
T ss_pred CCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHh
Confidence 6899999999865321 1 1 11599999999999999999996
No 16
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=2.3e-32 Score=255.10 Aligned_cols=256 Identities=17% Similarity=0.239 Sum_probs=181.8
Q ss_pred hhcCCCCCCCCCCCCCcccccccC-C----CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCC
Q 043529 28 LRRRELNLPPGPKPWPIIGNLNLI-G----PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYR 102 (307)
Q Consensus 28 ~~~~~~~lpPgP~~lPilGn~~~l-~----~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R 102 (307)
..+++.++||||+++|++||++.+ . ..++..+.+|+++||++|++++|+.|+||++||++++++|++++..|+++
T Consensus 32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~ 111 (490)
T PLN02500 32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS 111 (490)
T ss_pred cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence 344556789999999999997642 2 34667789999999999999999999999999999999999888888765
Q ss_pred CCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHH
Q 043529 103 PKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNS-YEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNL 181 (307)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~ 181 (307)
....... +. + +..++..+|+.||++||+++ +.|++.+++. +.+.+.+.+..+++.+.+ ++++|+.+.+.++++
T Consensus 112 ~~~~~~~-~~-g-~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~ 185 (490)
T PLN02500 112 YPRSIGG-IL-G-KWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTF 185 (490)
T ss_pred CchHHHH-Hh-C-cccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHH
Confidence 3221111 11 1 22344457999999999995 7889888876 456777777777776653 457999999999999
Q ss_pred HHHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 043529 182 EVMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRK 261 (307)
Q Consensus 182 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 261 (307)
+++++++||.+.+.. ...++.+.+..+...... ....+|.. .+ ++..+..+.+++++.++|+++++...
T Consensus 186 ~vi~~~~fg~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p~~------~~-~~~~~~~~~~~~~~~~~i~~~~~~~~ 254 (490)
T PLN02500 186 NLMAKHIMSMDPGEE--ETEQLKKEYVTFMKGVVS--APLNFPGT------AY-RKALKSRATILKFIERKMEERIEKLK 254 (490)
T ss_pred HHHHHHHhCCCCCch--HHHHHHHHHHHHHhhhhc--chhcCCCc------cc-HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999876432 122333323332222111 11123321 12 23345677888889999998876442
Q ss_pred CCC-CCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 262 GVD-NYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 262 ~~~-~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
... +....|+++.+++. ..+|+++|++++.++++|||||
T Consensus 255 ~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dT 294 (490)
T PLN02500 255 EEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHET 294 (490)
T ss_pred cccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhH
Confidence 111 11357999999872 2489999999999999999996
No 17
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.97 E-value=7.2e-30 Score=236.54 Aligned_cols=249 Identities=18% Similarity=0.227 Sum_probs=182.6
Q ss_pred hcCCCCCCCCCCCCCcccccccC-CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCc
Q 043529 29 RRRELNLPPGPKPWPIIGNLNLI-GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAA 107 (307)
Q Consensus 29 ~~~~~~lpPgP~~lPilGn~~~l-~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~ 107 (307)
..+..++||||+++|++||++++ .++++..+.+++++||+++++++|+.++|+++||+++++++.++.+.| ++....
T Consensus 30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~--~~~~~~ 107 (463)
T PLN02196 30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPA 107 (463)
T ss_pred CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc--cccCch
Confidence 33456789999999999998765 567899999999999999999999999999999999999999877666 343221
Q ss_pred cceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHHHH
Q 043529 108 GKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEVMSRM 187 (307)
Q Consensus 108 ~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ii~~~ 187 (307)
......+ +.+++..+|+.|+++||+++ +.|++++++.+.+.+.+.+.++++.|. ++++++.+.+.++++++++.+
T Consensus 108 ~~~~~~g-~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~ 182 (463)
T PLN02196 108 SKERMLG-KQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLS 182 (463)
T ss_pred HHHHHcC-cccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHH
Confidence 1111122 23455568999999999996 788999999999999999999888774 457899999999999999999
Q ss_pred HhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 043529 188 VLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYE 267 (307)
Q Consensus 188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 267 (307)
+||.+.... ...+.+.+..+.. . ...+|+ .+|. ...++..++.+++.+++.++|+++++.. .+
T Consensus 183 ~fG~~~~~~---~~~~~~~~~~~~~---~---~~~~~~--~~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~~ 245 (463)
T PLN02196 183 IFGKDEVLY---REDLKRCYYILEK---G---YNSMPI--NLPG-TLFHKSMKARKELAQILAKILSKRRQNG-----SS 245 (463)
T ss_pred HcCCCCchH---HHHHHHHHHHHhc---c---hhcccc--cCCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC-----CC
Confidence 999875321 1122222211111 0 112332 1211 1123445567778888888888876532 23
Q ss_pred CCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 268 AKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 268 ~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
..|+++.+++. +..+++++|.+++.++++||+||
T Consensus 246 ~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dT 279 (463)
T PLN02196 246 HNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDT 279 (463)
T ss_pred cccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHH
Confidence 57999999861 23589999999999999999986
No 18
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.97 E-value=1.6e-29 Score=234.14 Aligned_cols=259 Identities=14% Similarity=0.170 Sum_probs=177.9
Q ss_pred HHHHHhhcCCCCCCCCCCCCCcccccccC-C----CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCc
Q 043529 23 LLSLRLRRRELNLPPGPKPWPIIGNLNLI-G----PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDA 97 (307)
Q Consensus 23 ~l~~~~~~~~~~lpPgP~~lPilGn~~~l-~----~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~ 97 (307)
++.++....+.++||||.++|++||++++ . .+++..+.+|+++||++|++++|+.++|+++||++++++|.++..
T Consensus 19 ~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~ 98 (472)
T PLN02987 19 LLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGK 98 (472)
T ss_pred HHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCc
Confidence 33334344555789999999999999875 2 357888899999999999999999999999999999999999888
Q ss_pred ccCCCCCcCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhcCCceechHHHH
Q 043529 98 LFSYRPKLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSGKPIILKDNLL 177 (307)
Q Consensus 98 ~f~~R~~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 177 (307)
.|++++.......+ +.+++. ..+|+.||++||++. ++++.+.++.+. .+++.++++...+..++++++.+.++
T Consensus 99 ~f~~~~~~~~~~~l--g~~~l~-~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (472)
T PLN02987 99 LFECSYPGSISNLL--GKHSLL-LMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSWSSRVLLMEEAK 171 (472)
T ss_pred eEEecCcHHHHHHh--Cccccc-ccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhhccceehHHHHH
Confidence 89776532222222 222344 457999999999974 544555544432 22334443333222234789999999
Q ss_pred HHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 043529 178 DLNLEVMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHN 257 (307)
Q Consensus 178 ~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 257 (307)
+++++++++++||.+..... +.+.+.+....... ..+++|++. +..++..+..+++.+++.++|++++
T Consensus 172 ~~t~~vi~~~~fg~~~~~~~---~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~ 239 (472)
T PLN02987 172 KITFELTVKQLMSFDPGEWT---ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRR 239 (472)
T ss_pred HHHHHHHHHHHcCCCChHHH---HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998764221 12222222211111 123455531 1234556678889999999999987
Q ss_pred hhccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 258 ARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 258 ~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
+.... ......|+++.|++. . ..+++++|+++++++++|||||
T Consensus 240 ~~~~~-~~~~~~d~l~~ll~~-~-----~~~~~~ei~~~~~~l~~Ag~~t 282 (472)
T PLN02987 240 KEEEE-GAEKKKDMLAALLAS-D-----DGFSDEEIVDFLVALLVAGYET 282 (472)
T ss_pred hhhhc-cCcccccHHHHHHhc-C-----CCCCHHHHHHHHHHHHHhccch
Confidence 65421 112357999999973 2 1489999999999999999996
No 19
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.97 E-value=4.3e-31 Score=243.28 Aligned_cols=268 Identities=28% Similarity=0.418 Sum_probs=203.9
Q ss_pred CCCCCCCCcccccccCC--CCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccce-ee
Q 043529 36 PPGPKPWPIIGNLNLIG--PLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKY-TT 112 (307)
Q Consensus 36 pPgP~~lPilGn~~~l~--~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~-~~ 112 (307)
||||+++|++||++++. ..++..+.+|+++|||||++++|+.++|+|+||+++++++.++...|+.++....... ..
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 89999999999998763 5688889999999999999999999999999999999999988878887754222221 00
Q ss_pred cCCcceEeccCChhHHHHHHHHHHhhcCHH-HHHhhHHHHHHHHHHHHHHHHhhcC--CceechHHHHHHHHHHHHHHHh
Q 043529 113 FNYSNITWSQYGPYWRQLRKICLMELFTAK-RLNSYEYIRVEETMLFLRNLYESSG--KPIILKDNLLDLNLEVMSRMVL 189 (307)
Q Consensus 113 ~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~t~~ii~~~~f 189 (307)
...+..++...|+.|+.+|++++ +.|+.+ .+ .+.+.++++++.+++.|.+..+ +++|+.+.+.++++++++.++|
T Consensus 81 ~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f 158 (463)
T PF00067_consen 81 PFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF 158 (463)
T ss_dssp HHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence 11234455567899999999996 566766 55 8899999999999999998763 3699999999999999999999
Q ss_pred cCccccch-hhHHHHHHHHHHHHHhccC--CccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 043529 190 GKKYTNEI-VARHEFKEMADELFILGGV--LDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNY 266 (307)
Q Consensus 190 G~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 266 (307)
|.+++..+ ....++.+.+..++..... ..+...+|++++++. ...++..++.+.+.+++..+++++++..+.. ..
T Consensus 159 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~ 236 (463)
T PF00067_consen 159 GKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPT-PLFRRFKRARDRLRKYIKEIIEERREELDDG-DE 236 (463)
T ss_dssp SSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-SS
T ss_pred cceeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc-cc
Confidence 99976332 3334566666655544322 123456777666642 3345566677888999999999998876421 13
Q ss_pred CCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 267 EAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 267 ~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
...|+++.+|+..++.+++..+|++++.+.+.++++|||+|
T Consensus 237 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dt 277 (463)
T PF00067_consen 237 SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDT 277 (463)
T ss_dssp SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc
Confidence 47899999998541211124799999999999999999874
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=99.97 E-value=1.5e-29 Score=234.46 Aligned_cols=251 Identities=17% Similarity=0.163 Sum_probs=180.8
Q ss_pred CCCCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccce
Q 043529 31 RELNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKY 110 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~ 110 (307)
.+.++||||+++|++||++.+.++++..+.+|+++||++|++++|+.++|+++||++++++|.++...|..+.......
T Consensus 28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~- 106 (463)
T PLN02774 28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD- 106 (463)
T ss_pred CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH-
Confidence 3447799999999999987664456778899999999999999999999999999999999988777775432212222
Q ss_pred eecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHHHHHh
Q 043529 111 TTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNS-YEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEVMSRMVL 189 (307)
Q Consensus 111 ~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ii~~~~f 189 (307)
+. + ++++++.+|+.|+.+|++++ ++|++..++. +.+.+.+.+.++++.+.. ++++|+.+.+.++++++++.++|
T Consensus 107 ~l-g-~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~ 181 (463)
T PLN02774 107 IL-G-TCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIA 181 (463)
T ss_pred Hh-C-ccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHc
Confidence 22 2 23444557999999999995 7899988875 688888888888877753 46799999999999999999999
Q ss_pred cCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 043529 190 GKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAK 269 (307)
Q Consensus 190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 269 (307)
|.+.... ...+.+.+..+.. ... .+|. ++|...+ ++..++.+.+.+++.+.|+++++.. ...+
T Consensus 182 g~~~~~~---~~~~~~~~~~~~~--~~~----~~~~--~lp~~~~-~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~ 244 (463)
T PLN02774 182 GTLSKPI---SEEFKTEFFKLVL--GTL----SLPI--DLPGTNY-RSGVQARKNIVRMLRQLIQERRASG-----ETHT 244 (463)
T ss_pred CCCChHH---HHHHHHHHHHHhc--ccc----cCCc--CCCChhh-hHHHHHHHHHHHHHHHHHHHHHhcC-----CCcc
Confidence 9865321 1222222222111 111 1221 1221112 3445567788889999998886532 2357
Q ss_pred CHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 270 DMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 270 d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
|+++.+++ ..++ +..+|+++|.+++.++++|||||
T Consensus 245 d~l~~ll~-~~~~--~~~~s~~ei~~~~~~ll~Ag~dT 279 (463)
T PLN02774 245 DMLGYLMR-KEGN--RYKLTDEEIIDQIITILYSGYET 279 (463)
T ss_pred cHHHHHHh-CccC--CCCCCHHHHHHHHHHHHHhcchh
Confidence 99999997 3221 23589999999999999999986
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.97 E-value=6.4e-29 Score=232.10 Aligned_cols=256 Identities=21% Similarity=0.232 Sum_probs=181.4
Q ss_pred CCCCCCCCCCCCCcccccccC-----CCCchHHHHHHHHhhCC--ceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCC
Q 043529 31 RELNLPPGPKPWPIIGNLNLI-----GPLPYRSIHALSEKYGP--IMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRP 103 (307)
Q Consensus 31 ~~~~lpPgP~~lPilGn~~~l-----~~~~~~~~~~~~~kYG~--i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~ 103 (307)
...++||||+++|++||++++ ..+++..+.+++++||+ +|++++|+.++|+++||+++++++.++ +.|.++.
T Consensus 39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~ 117 (490)
T PLN02302 39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW 117 (490)
T ss_pred CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence 445789999999999998764 23678889999999997 799999999999999999999999865 4566543
Q ss_pred CcCccceeecCCcceEeccCChhHHHHHHHHHHhhc-CHHHHHhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHH
Q 043529 104 KLAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELF-TAKRLNSYEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLE 182 (307)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ 182 (307)
...... . .+ +...+..+|+.|+++||+++ +.| ++++++.+.+.++++++.+++.+.. +..+|+.+.+.+++++
T Consensus 118 ~~~~~~-~-~g-~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~ 191 (490)
T PLN02302 118 PESTVE-L-IG-RKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFK 191 (490)
T ss_pred chhHHH-H-hc-cccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHH
Confidence 221112 1 12 23344457999999999996 556 5788899999999999999998864 3469999999999999
Q ss_pred HHHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 043529 183 VMSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKG 262 (307)
Q Consensus 183 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (307)
+++.++||.+.... .+.+.+.+..+...... ....+|. ..+ .+..+..+++.+++.+.|+++++....
T Consensus 192 vi~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~p~------~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~ 259 (490)
T PLN02302 192 IIMYIFLSSESELV---MEALEREYTTLNYGVRA--MAINLPG------FAY-HRALKARKKLVALFQSIVDERRNSRKQ 259 (490)
T ss_pred HHHHHHcCCCChHH---HHHHHHHHHHHHHHhhh--CCcCCCc------hhh-HHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999876532 12222222211111111 1111221 112 223345677888888889888765421
Q ss_pred CCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 263 VDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 263 ~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
..+....|+++.+++..+++ +..+++++|.+++.++++|||||
T Consensus 260 ~~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dt 302 (490)
T PLN02302 260 NISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHES 302 (490)
T ss_pred cCCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHH
Confidence 11123579999999843221 34589999999999999999986
No 22
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=236.01 Aligned_cols=264 Identities=25% Similarity=0.368 Sum_probs=189.0
Q ss_pred CCCCCCCCCCCCcccccccC-CC--CchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcC-c
Q 043529 32 ELNLPPGPKPWPIIGNLNLI-GP--LPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLA-A 107 (307)
Q Consensus 32 ~~~lpPgP~~lPilGn~~~l-~~--~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~-~ 107 (307)
....||||+++|++||+..+ .. .....+.++..+||++|+.|+|+.|+|+++||+.++++|.++...+..-+... .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 45679999999999999876 22 45667788999999999999999999999999999999965544443333222 2
Q ss_pred cceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc-CCceechHHHHHHHHHHHHH
Q 043529 108 GKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS-GKPIILKDNLLDLNLEVMSR 186 (307)
Q Consensus 108 ~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~t~~ii~~ 186 (307)
..... | ++++++ .|+.|+++||+++ ++|+.+.++.+.....+++..++..+.... ++.+|+.+.++++|++++|+
T Consensus 113 ~~~~l-G-~gll~~-~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~ 188 (497)
T KOG0157|consen 113 LKPWL-G-DGLLFS-DGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK 188 (497)
T ss_pred HHHHh-c-CccccC-CchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence 22222 2 344444 5999999999985 889999999999999998888888777654 44499999999999999999
Q ss_pred HHhcCcccc-chhhHHHHHHHHHHHHHhccCCccccccc-cccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 043529 187 MVLGKKYTN-EIVARHEFKEMADELFILGGVLDIGDMIP-WLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVD 264 (307)
Q Consensus 187 ~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 264 (307)
++||..... ......++.+.++.+...... ....| +..++...+..++..++.+.++.+++++|+++++...+..
T Consensus 189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~ 265 (497)
T KOG0157|consen 189 TAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG 265 (497)
T ss_pred HhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999933321 112223444444433333221 22344 3333322224577788899999999999999997643211
Q ss_pred C---CCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 265 N---YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 265 ~---~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
. ....|+++.+.. ..+ ..+|+++|.++|.+|++|||||
T Consensus 266 ~~~~~~~~d~L~~~~~-~~~----~~l~~~~i~d~v~tf~faG~DT 306 (497)
T KOG0157|consen 266 SGEEKKRLDFLDTLLL-EED----KPLTDEDIRDEVDTFMFAGHDT 306 (497)
T ss_pred CcccchhhhHHHHHHH-hcc----CCCCHHHHHHHHHHheeeccch
Confidence 1 235788886333 111 4699999999999999999997
No 23
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.97 E-value=2.8e-29 Score=232.09 Aligned_cols=255 Identities=16% Similarity=0.182 Sum_probs=178.2
Q ss_pred cCCCCCCCCCCCCCcccccccC-----CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCC
Q 043529 30 RRELNLPPGPKPWPIIGNLNLI-----GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPK 104 (307)
Q Consensus 30 ~~~~~lpPgP~~lPilGn~~~l-----~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~ 104 (307)
+++.++||||.++|++||++++ ...++..+.+|+++||+||++++|+.++||++||++++++|.+++..|++|+.
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 3456789999999999999876 23578888999999999999999999999999999999999999888887743
Q ss_pred cCccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHh-hHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHH
Q 043529 105 LAAGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNS-YEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEV 183 (307)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~i 183 (307)
. ....+. + .++++..+|+.||++|+++. +.|+...+.. ..+.+.+.+..+++.+.. ++++++.+.+.++++++
T Consensus 83 ~-~~~~l~-g-~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v 156 (452)
T PLN03141 83 K-SLTELM-G-KSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEV 156 (452)
T ss_pred h-hHHHHh-C-cccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHH
Confidence 2 222222 2 23455568999999999985 6677666544 244555555555554432 56899999999999999
Q ss_pred HHHHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 043529 184 MSRMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGV 263 (307)
Q Consensus 184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 263 (307)
++.++||.+... ....+.+.+..+..... .+|+ ++|...+ .+..+..+++.+++.++|+++++.....
T Consensus 157 i~~~~~G~~~~~---~~~~~~~~~~~~~~~~~------~~~~--~~p~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 224 (452)
T PLN03141 157 LVKALISLEPGE---EMEFLKKEFQEFIKGLM------SLPI--KLPGTRL-YRSLQAKKRMVKLVKKIIEEKRRAMKNK 224 (452)
T ss_pred HHHHHcCCCchH---HHHHHHHHHHHHhhhHH------hCcc--CCCchHh-HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999986532 12223333333222111 1221 1111112 2334567788889999999887654211
Q ss_pred CC---CCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 264 DN---YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 264 ~~---~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+ ..+.|+++.+++.. +..+++++|++++.++++|||||
T Consensus 225 ~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dT 266 (452)
T PLN03141 225 EEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDS 266 (452)
T ss_pred CccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchh
Confidence 10 12469999999732 23589999999999999999986
No 24
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.97 E-value=7.1e-29 Score=231.68 Aligned_cols=264 Identities=14% Similarity=0.122 Sum_probs=179.5
Q ss_pred CCCCCCCCcccccccC-CC--CchHHHHHHHHhhCCceE---EecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccc
Q 043529 36 PPGPKPWPIIGNLNLI-GP--LPYRSIHALSEKYGPIMQ---LKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGK 109 (307)
Q Consensus 36 pPgP~~lPilGn~~~l-~~--~~~~~~~~~~~kYG~i~~---~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~ 109 (307)
.|||+++|++||++.+ .+ ..+..+.+...+||..++ .|+|+.|+|+|+|||++++||.++.+.|.+++......
T Consensus 33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~ 112 (500)
T PLN02169 33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF 112 (500)
T ss_pred CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH
Confidence 5999999999999765 32 223333444445886655 68899999999999999999998877787765321111
Q ss_pred eeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHh--hHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHH
Q 043529 110 YTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNS--YEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMS 185 (307)
Q Consensus 110 ~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~--~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~ 185 (307)
.. .+++++..+|+.||.+||+++ ++|+.+++.. +...++++++.+++.+.+.+ ++++|+.+.+.++|+|+||
T Consensus 113 ~~---~g~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~ 188 (500)
T PLN02169 113 DV---LGEGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS 188 (500)
T ss_pred Hh---hcCcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence 11 124455567999999999995 8898877653 34667778888988887643 5689999999999999999
Q ss_pred HHHhcCccccch--hhHHHHHHHHHHHHHhccCCccccccccc-----cccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043529 186 RMVLGKKYTNEI--VARHEFKEMADELFILGGVLDIGDMIPWL-----GFLDLQGYIKRMKVLAKKFDRLFEYELDEHNA 258 (307)
Q Consensus 186 ~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 258 (307)
+++||.+.+..+ ....++.+.++....... ..++.|++ .+++ .++.++..+..+.+++++.++|+++++
T Consensus 189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~r~~ 264 (500)
T PLN02169 189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKIISSRRK 264 (500)
T ss_pred hheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999875322 111234443333222211 11233321 1221 234466677888999999999999876
Q ss_pred hccCC--CCCCCCCHHHHHhhhcCCC-CccccCchHHHHHHHHHHhhccCCC
Q 043529 259 RRKGV--DNYEAKDMMDVLLQLADDP-TLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 259 ~~~~~--~~~~~~d~ld~ll~~~~~~-~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
...+. .+...+|+++.+++...++ ..+..+++++|.+++.++++|||||
T Consensus 265 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dT 316 (500)
T PLN02169 265 EEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDT 316 (500)
T ss_pred HhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhH
Confidence 42111 1112479999999843211 1122478999999999999999996
No 25
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.96 E-value=3.8e-28 Score=228.11 Aligned_cols=261 Identities=18% Similarity=0.230 Sum_probs=177.8
Q ss_pred CCCCCCCCcccccccCCCCchHHHHHHHHhh---CCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcC-cccee
Q 043529 36 PPGPKPWPIIGNLNLIGPLPYRSIHALSEKY---GPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLA-AGKYT 111 (307)
Q Consensus 36 pPgP~~lPilGn~~~l~~~~~~~~~~~~~kY---G~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~-~~~~~ 111 (307)
+|||+++|++||++.+.. .+..+.+|.++| |++|++++|+.|+|+++||+++++++.++...|..++... ....+
T Consensus 32 ~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~ 110 (516)
T PLN03195 32 RKGPKSWPIIGAALEQLK-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL 110 (516)
T ss_pred cCCCCCCCeecchHHHHh-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence 699999999999865422 244577888888 8999999999999999999999999987655666553211 11111
Q ss_pred ecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHH-HHHHHHHHHHHHhh--cCCceechHHHHHHHHHHHHHHH
Q 043529 112 TFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIR-VEETMLFLRNLYES--SGKPIILKDNLLDLNLEVMSRMV 188 (307)
Q Consensus 112 ~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~--~~~~~~~~~~~~~~t~~ii~~~~ 188 (307)
. ++++++.+|+.|+++||+++ +.|+.+.++.+.+.+ .+.+..+++.+.+. .++++|+.+.+.++++++++.++
T Consensus 111 ~---g~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~ 186 (516)
T PLN03195 111 L---GDGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG 186 (516)
T ss_pred h---cCeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence 1 23456678999999999995 778999999888876 55566777777643 25789999999999999999999
Q ss_pred hcCccccchh--hHHHHHHHHHHHHHhccCCccccccccc--c-ccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 043529 189 LGKKYTNEIV--ARHEFKEMADELFILGGVLDIGDMIPWL--G-FLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGV 263 (307)
Q Consensus 189 fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l--~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 263 (307)
||.++...+. ....+.+.++........ ....|++ . +++ .+..++..+..+.+++++.++|++++++....
T Consensus 187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 262 (516)
T PLN03195 187 FGVEIGTLSPSLPENPFAQAFDTANIIVTL---RFIDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA 262 (516)
T ss_pred hCCCccccccCCCccHHHHHHHHHHHHHHH---HHhcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998764321 112333333322211100 0011211 1 111 12223344566778888889998887653210
Q ss_pred ---CCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 264 ---DNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 264 ---~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+....|+++.+++...+ ++..+++++|.+++.++++|||||
T Consensus 263 ~~~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~AG~dT 307 (516)
T PLN03195 263 RKSGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVIAGRDT 307 (516)
T ss_pred ccccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHHHhhHh
Confidence 111357999999974322 133599999999999999999996
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.95 E-value=9.4e-27 Score=217.11 Aligned_cols=262 Identities=13% Similarity=0.151 Sum_probs=185.8
Q ss_pred CCCCCCCCCCccccccc-C----CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCcc
Q 043529 34 NLPPGPKPWPIIGNLNL-I----GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAG 108 (307)
Q Consensus 34 ~lpPgP~~lPilGn~~~-l----~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~ 108 (307)
++=-|-.|||++|+.+. + ...++..+.+|+++|||+|++++|+.++|+++|||++++++.+++..|..++.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~ 91 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS 91 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence 45578899999998653 2 346789999999999999999999999999999999999999877889887542221
Q ss_pred ceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHH-HHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHH
Q 043529 109 KYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEY-IRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMS 185 (307)
Q Consensus 109 ~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~ 185 (307)
..+. ++.++..+|+.||++||+++ +.|+.+.+.++.+ ++.++++.+++.+.+.. ++++|+.+.++++++++++
T Consensus 92 ~~~~---~~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~ 167 (489)
T PLN02936 92 EFLF---GSGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG 167 (489)
T ss_pred HHHh---cCccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence 2111 23344567999999999995 7888888877644 78889999999997754 5789999999999999999
Q ss_pred HHHhcCccccchhhHHHHHHHHHHHHHhccCCccccccccccc--cc-cccHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 043529 186 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGF--LD-LQGYIKRMKVLAKKFDRLFEYELDEHNARRKG 262 (307)
Q Consensus 186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 262 (307)
.++||.+++..+.. .++.+.+...+..... ...+++|++++ +. ..++.++..+..+.+..++.++|+++++..++
T Consensus 168 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~ 245 (489)
T PLN02936 168 LSVFNYNFDSLTTD-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEA 245 (489)
T ss_pred HHHcCCCccccccC-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998753211 1222222222221111 11223443221 00 11233445566777888888888887654321
Q ss_pred CC---------CCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 263 VD---------NYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 263 ~~---------~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.. +....|+++.|++. . ..+++++|.++|.++++|||||
T Consensus 246 ~~~~~~~~~~~~~~~~d~l~~ll~~-~-----~~~~~~~i~~~~~~~~~aG~dT 293 (489)
T PLN02936 246 EGEVIEGEEYVNDSDPSVLRFLLAS-R-----EEVSSVQLRDDLLSMLVAGHET 293 (489)
T ss_pred cccccccccccccCchHHHHHHHhc-c-----ccCCHHHHHHHHHHHHHHhHHH
Confidence 00 01246899999872 2 2489999999999999999986
No 27
>PLN02738 carotene beta-ring hydroxylase
Probab=99.95 E-value=6.8e-26 Score=215.67 Aligned_cols=251 Identities=13% Similarity=0.143 Sum_probs=173.6
Q ss_pred cccccccC-CCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCcCccceeecCCcceEecc
Q 043529 44 IIGNLNLI-GPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKYTTFNYSNITWSQ 122 (307)
Q Consensus 44 ilGn~~~l-~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~ 122 (307)
.+||+..+ +...+..+.+|+++|||||++++|+.++|+|+||+.+++++.+++..|..++........ . +.+++..
T Consensus 141 ~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~-~--g~~l~~~ 217 (633)
T PLN02738 141 AKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV-M--GKGLIPA 217 (633)
T ss_pred ccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc-c--CCceecC
Confidence 35665554 445778899999999999999999999999999999999999877778776532121111 1 2334556
Q ss_pred CChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhc--CCceechHHHHHHHHHHHHHHHhcCccccchhhH
Q 043529 123 YGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESS--GKPIILKDNLLDLNLEVMSRMVLGKKYTNEIVAR 200 (307)
Q Consensus 123 ~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~~~~t~~ii~~~~fG~~~~~~~~~~ 200 (307)
+|+.||.+|+.++ +.|+.+.+..+.+++.++++.+++.|.+.. ++++|+.+.+..+|++||+.++||.+++.... .
T Consensus 218 dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~-~ 295 (633)
T PLN02738 218 DGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN-D 295 (633)
T ss_pred CcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc-c
Confidence 8999999999995 889999999999999999999999997653 67899999999999999999999998864321 1
Q ss_pred HHHHHHHHHHHHhcc----CCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--------CCCCC
Q 043529 201 HEFKEMADELFILGG----VLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGV--------DNYEA 268 (307)
Q Consensus 201 ~~~~~~~~~~~~~~~----~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~ 268 (307)
+.+.+.+...+.... .......+|+++.+ +++.++.....+.+..++..+++.+++..++. .+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~ 373 (633)
T PLN02738 296 TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERD 373 (633)
T ss_pred hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccccc
Confidence 122222222221111 11111223433333 22223444455566666666666544321100 01124
Q ss_pred CCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 269 KDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 269 ~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.|+++.|++. . ..+|+++|.+++.++++|||||
T Consensus 374 ~dil~~Ll~~-~-----~~ls~~~L~~e~~~ll~AG~eT 406 (633)
T PLN02738 374 PSILHFLLAS-G-----DDVSSKQLRDDLMTMLIAGHET 406 (633)
T ss_pred chHHHHHHHc-C-----CCCCHHHHHHHHHHHHhcCCcc
Confidence 6899999873 1 2489999999999999999997
No 28
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=2.4e-24 Score=192.58 Aligned_cols=259 Identities=18% Similarity=0.201 Sum_probs=193.5
Q ss_pred CCCCCCCCcccccccC----CCCchHHHHHHHHhhCCceEEe-cCCcCEEEecCHHHHHHHHHhcCcccCCCC-CcC---
Q 043529 36 PPGPKPWPIIGNLNLI----GPLPYRSIHALSEKYGPIMQLK-FGSFPVVVGSSVEMAEAFLKTHDALFSYRP-KLA--- 106 (307)
Q Consensus 36 pPgP~~lPilGn~~~l----~~~~~~~~~~~~~kYG~i~~~~-lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~-~~~--- 106 (307)
+|||.++|++|+++.+ ..+.|+.....+++|||||+.. +|+..+|.+.+|++++.++..++ .+.-|| ...
T Consensus 52 IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~w~ 130 (519)
T KOG0159|consen 52 IPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEPWV 130 (519)
T ss_pred cCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccchhh
Confidence 7999999999998743 2468888999999999999999 89999999999999999998665 556675 211
Q ss_pred ccceeecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhcC-----CceechHHHHHHHH
Q 043529 107 AGKYTTFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSG-----KPIILKDNLLDLNL 181 (307)
Q Consensus 107 ~~~~~~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~t~ 181 (307)
..+... +...+++...|+.|++.|..+++.+++++.++.|.+.+++.++++++.+++..+ .+.|+.+.+.+|++
T Consensus 131 ~~rd~~-~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl 209 (519)
T KOG0159|consen 131 AYRDFR-GGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL 209 (519)
T ss_pred hhHHhh-ccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence 111122 234567777899999999999888899999999999999999999999977542 36799999999999
Q ss_pred HHHHHHHhcCccccch----hhHHHHHHHHHHHHHhccCCcccccc-ccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 043529 182 EVMSRMVLGKKYTNEI----VARHEFKEMADELFILGGVLDIGDMI-PWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEH 256 (307)
Q Consensus 182 ~ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (307)
+.||.++||.+.+... ++.+.+.+.++.+|..... .++. +++++++.+.| +++.+.-+.+..+.++.|++.
T Consensus 210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~w-k~~~~~~D~i~~~~~~~Id~~ 285 (519)
T KOG0159|consen 210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVW-KDFVRAWDQIFDVGDKYIDNA 285 (519)
T ss_pred HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987532 3446677777777776433 2233 46777765555 444445555666666666666
Q ss_pred HhhccCCCC--CCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 257 NARRKGVDN--YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 257 ~~~~~~~~~--~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
.+..+..++ .....++..+|. .+.++.++++..++||++||-+|
T Consensus 286 l~~l~~~~~~~~~~~~~l~~~L~-------~~~l~~k~~~~~~~dll~aGvDT 331 (519)
T KOG0159|consen 286 LEELEKQDSAGSEYTGSLLELLL-------RKELSRKDAKANVMDLLAAGVDT 331 (519)
T ss_pred HHHHHhccccccchhHHHHHHHH-------HccCCHHHHHHHHHHHHHHhccc
Confidence 655432111 123445555554 12488999999999999999775
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.87 E-value=2.4e-20 Score=174.27 Aligned_cols=247 Identities=15% Similarity=0.111 Sum_probs=167.2
Q ss_pred CCCcccccccCCCCchHHHHHHHHhhC-CceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCc-CccceeecCCcce
Q 043529 41 PWPIIGNLNLIGPLPYRSIHALSEKYG-PIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKL-AAGKYTTFNYSNI 118 (307)
Q Consensus 41 ~lPilGn~~~l~~~~~~~~~~~~~kYG-~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~-~~~~~~~~~~~~~ 118 (307)
..++.|+....-.+.+..+..+.++|+ .+++++.++. |+++||+.+++++.++...|...+.. .....+. +++
T Consensus 48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~---g~g 122 (502)
T PLN02426 48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL---GRG 122 (502)
T ss_pred CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc---CCc
Confidence 355788875532345667767888887 5777775543 89999999999999877778754321 1111111 234
Q ss_pred EeccCChhHHHHHHHHHHhhcCHHHHHhh--HHHHHHHHHHHHHHHHhhc----CCceechHHHHHHHHHHHHHHHhcCc
Q 043529 119 TWSQYGPYWRQLRKICLMELFTAKRLNSY--EYIRVEETMLFLRNLYESS----GKPIILKDNLLDLNLEVMSRMVLGKK 192 (307)
Q Consensus 119 ~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~t~~ii~~~~fG~~ 192 (307)
+++.+|+.||.+||+++ +.|+.+.++.+ +.++++.++.+++.+.+.. +.++|+.+.+.++|+++|+.++||.+
T Consensus 123 i~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~ 201 (502)
T PLN02426 123 IFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD 201 (502)
T ss_pred eeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence 56678999999999995 88888888766 3677777778888876532 35799999999999999999999998
Q ss_pred cccchh--hHHHHHHHHHHHHHhccCCccccccccc----cccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 043529 193 YTNEIV--ARHEFKEMADELFILGGVLDIGDMIPWL----GFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNY 266 (307)
Q Consensus 193 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 266 (307)
++..+. ...++.+.++.+...... .....+|++ ++++. +..++..+..+.+++++.++|+++++... .
T Consensus 202 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----~ 275 (502)
T PLN02426 202 PGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLGF----S 275 (502)
T ss_pred CcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhccc----C
Confidence 764321 123444444433221110 001122322 22222 23355667788889999999999876421 1
Q ss_pred CCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 267 EAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 267 ~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
...|+++.+++. . .+++++.+++.++++|||||
T Consensus 276 ~~~dll~~ll~~-~-------~~~~~l~~~~~~~l~AG~dT 308 (502)
T PLN02426 276 ASKDLLSRFMAS-I-------NDDKYLRDIVVSFLLAGRDT 308 (502)
T ss_pred CcchHHHHHHhc-C-------CCHHHHHHHHHHHHHhccch
Confidence 257999999972 1 26789999999999999997
No 30
>PLN02648 allene oxide synthase
Probab=99.82 E-value=2.8e-19 Score=165.41 Aligned_cols=157 Identities=13% Similarity=0.135 Sum_probs=123.9
Q ss_pred CCCCCCCCCCCcccccccC-----CCCchHHHHHHHHhhCC-ceEEecCCcCE-------EEecCHHHHHHHHHh----c
Q 043529 33 LNLPPGPKPWPIIGNLNLI-----GPLPYRSIHALSEKYGP-IMQLKFGSFPV-------VVGSSVEMAEAFLKT----H 95 (307)
Q Consensus 33 ~~lpPgP~~lPilGn~~~l-----~~~~~~~~~~~~~kYG~-i~~~~lg~~~~-------Vvv~~~e~~~evl~~----~ 95 (307)
.+.|||+.|||++|...++ ...+...+.+..+|||+ ||++++++.|+ |+++|||.++.+|.. +
T Consensus 16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~ 95 (480)
T PLN02648 16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK 95 (480)
T ss_pred CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence 3569999999999998643 23456888888999999 99999988666 999999999999974 4
Q ss_pred CcccCCCCCcCccceeecCCcc---eEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhh-c-CCce
Q 043529 96 DALFSYRPKLAAGKYTTFNYSN---ITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRNLYES-S-GKPI 170 (307)
Q Consensus 96 ~~~f~~R~~~~~~~~~~~~~~~---~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~-~~~~ 170 (307)
...|..... .... +. + ++ .++..+|+.|+++||++. +.|+. .++.|.+.+.+.+..+++.|... . +.++
T Consensus 96 ~~~~~~~~~-~~~~-l~-G-~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v 169 (480)
T PLN02648 96 RDVFTGTYM-PSTA-FT-G-GYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKA 169 (480)
T ss_pred cccceeeec-cCcc-cc-C-CceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence 444544322 2233 22 2 23 555668999999999996 77884 66889999999999999999653 2 5579
Q ss_pred echHHHHHHHHHHHHHHHhcCcccc
Q 043529 171 ILKDNLLDLNLEVMSRMVLGKKYTN 195 (307)
Q Consensus 171 ~~~~~~~~~t~~ii~~~~fG~~~~~ 195 (307)
|+.+.++++|++++++++||.+.+.
T Consensus 170 dv~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 170 EFNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred cccchHHHHHHHHHHHHHcCCCcch
Confidence 9999999999999999999986643
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=1.2e-16 Score=140.41 Aligned_cols=255 Identities=15% Similarity=0.098 Sum_probs=170.0
Q ss_pred CCCCCCCC-CCcccccccCCCCchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCCCCCc-Ccccee
Q 043529 34 NLPPGPKP-WPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSYRPKL-AAGKYT 111 (307)
Q Consensus 34 ~lpPgP~~-lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~R~~~-~~~~~~ 111 (307)
+.||--++ .|++|++..++++|...+.+.++|||+||++.++++.+.++.+|+...-+|......++-+--. ......
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v 110 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV 110 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence 45776665 5799999889999999999999999999999999999999999999999996542232221100 011111
Q ss_pred ecCCcceEeccCChhHHHHHHHHHHhhcCHHHHHhhHHHHHHHHHHHHHH-HHhhcCCceechHHHHHHHHHHHHHHHhc
Q 043529 112 TFNYSNITWSQYGPYWRQLRKICLMELFTAKRLNSYEYIRVEETMLFLRN-LYESSGKPIILKDNLLDLNLEVMSRMVLG 190 (307)
Q Consensus 112 ~~~~~~~~~~~~G~~wk~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~~~~t~~ii~~~~fG 190 (307)
+ ++++.....+....++.+++. ..+++..++++.+.+.++.+...+. +.+. +..-.+........+.+--.++||
T Consensus 111 F--g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~s-~~~d~l~~~~~~ii~tAs~~ll~~ 186 (486)
T KOG0684|consen 111 F--GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGES-GETDGLYTFCRLIIFTASRLLLGG 186 (486)
T ss_pred c--CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhcccccc-cchhHhhhhhHHHhhhhHHHhhhh
Confidence 1 134555566788888888884 6678999999999999998888776 3331 222234444444444444445555
Q ss_pred CccccchhhHHHHHHHHHHHHHhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 043529 191 KKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAKD 270 (307)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 270 (307)
+.-...+ +.....+.++...... ....||. ++|....+ +.+++++++.+.++++|.+++++.+ ...+|
T Consensus 187 e~r~~~d---~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~~~r-~~~ra~~~i~k~f~~~i~~rr~s~s----~~~~d 254 (486)
T KOG0684|consen 187 EVRDQLD---ADVAKLYHDLDQGFQP--FDFLFPY--NLPIPLLR-RRDRARKKISKIFSKIILDRRASIS----KWDND 254 (486)
T ss_pred hhhhhhc---chHHHHHHHHhccccc--hHhhccc--CCCcchhh-hHHHHHHHHHHHHHHHHHHHHhccc----cccHH
Confidence 4433211 1222223333332222 1335664 45544443 3457888999999999999988663 12468
Q ss_pred HHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCCC
Q 043529 271 MMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHGD 307 (307)
Q Consensus 271 ~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~~ 307 (307)
+++.+++.-++ +.+.|++|+....+-++.||..+
T Consensus 255 mlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~n 288 (486)
T KOG0684|consen 255 MLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHN 288 (486)
T ss_pred HHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhcccc
Confidence 99998882222 56799999999999999999753
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=1.9e-16 Score=144.46 Aligned_cols=223 Identities=19% Similarity=0.214 Sum_probs=155.4
Q ss_pred hHHHHHHHHhhCCceEEecCCc--CEEEecCHHHHHHHHHhcCcccCCCCCcCccce-eecC-CcceEeccCChhHHHHH
Q 043529 56 YRSIHALSEKYGPIMQLKFGSF--PVVVGSSVEMAEAFLKTHDALFSYRPKLAAGKY-TTFN-YSNITWSQYGPYWRQLR 131 (307)
Q Consensus 56 ~~~~~~~~~kYG~i~~~~lg~~--~~Vvv~~~e~~~evl~~~~~~f~~R~~~~~~~~-~~~~-~~~~~~~~~G~~wk~~R 131 (307)
......+.+.||.++.++..+. ..+++++++++++++.++. .++++........ .... +...++..+|+.|+++|
T Consensus 25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R 103 (411)
T COG2124 25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR 103 (411)
T ss_pred hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence 3445567788999999886543 3899999999999998663 2333221111110 0111 12325667899999999
Q ss_pred HHHHHhhcCHHHHHhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHH
Q 043529 132 KICLMELFTAKRLNSYEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEVMSRMVLGKKYTNEIVARHEFKEMADELF 211 (307)
Q Consensus 132 r~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~ 211 (307)
|+++ +.|+++.++.+.+.+.+.+..+++.+ .. ++..++.+....+++.+|| .+||...+.. ..+........
T Consensus 104 kl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~----~~~~~~~~~~~ 175 (411)
T COG2124 104 KLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ-GGADLVLDFAAELTLRVIA-ELLGVPLEDR----PQLLRWSDALL 175 (411)
T ss_pred HHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc-CCchhHHHHhhhhhHHHHH-HHhCCCHHHH----HHHHHHHHHHH
Confidence 9995 88999999999999999999999999 43 3677899999999999999 9999887532 12222222211
Q ss_pred HhccCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhcCCCCccccCchH
Q 043529 212 ILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDEHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERH 291 (307)
Q Consensus 212 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~ 291 (307)
... .|.... ...+ .+...+..++.+++.++|++++. ....|+++.|+... +++ +..+|++
T Consensus 176 ~~~--------~~~~~~--~~~~-~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~-~~~-~~~lsd~ 235 (411)
T COG2124 176 LRL--------DPDLGP--EEPW-RRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAE-DDG-GGRLSDD 235 (411)
T ss_pred hcc--------CcccCC--cccH-HHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHh-hCC-CCcCCHH
Confidence 110 021111 1112 34456788999999999999983 12679999999843 322 2269999
Q ss_pred HHHHHHHHHhhccCCC
Q 043529 292 SLKAVTQNSCRYGHGD 307 (307)
Q Consensus 292 ~i~~~~~~l~~aG~~~ 307 (307)
||.++++.+++|||||
T Consensus 236 Ei~~~~~~ll~AGheT 251 (411)
T COG2124 236 EIRDELITLLVAGHET 251 (411)
T ss_pred HHHHHHHHHHHhhhHH
Confidence 9999999999999997
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=75.51 E-value=12 Score=27.02 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCcccccccCCCCchHHHHHHHHhhCCceEEecCCcC------EEEecCHHHHHHHHHh
Q 043529 33 LNLPPGPKPWPIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFP------VVVGSSVEMAEAFLKT 94 (307)
Q Consensus 33 ~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~------~Vvv~~~e~~~evl~~ 94 (307)
.++||--..+.++-|++.- --...+-+++-+||+|-.+++|..+ .||-.|-..||.+...
T Consensus 11 ~rlppevnriLyirNLp~~--ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLPFK--ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCChhhheeEEEecCCcc--ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 3556655556666666432 1123456778889999999999654 7888899999998864
No 34
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=62.53 E-value=22 Score=21.88 Aligned_cols=43 Identities=26% Similarity=0.240 Sum_probs=28.7
Q ss_pred HHHHHhhCCceEEecCCc----CEEEecCHHHHHHHHH-hcCcccCCC
Q 043529 60 HALSEKYGPIMQLKFGSF----PVVVGSSVEMAEAFLK-THDALFSYR 102 (307)
Q Consensus 60 ~~~~~kYG~i~~~~lg~~----~~Vvv~~~e~~~evl~-~~~~~f~~R 102 (307)
.+...+||+|-.+.+... =.|-..+++.|+.+.. -++..|.+|
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~l~~~~~~g~ 49 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQLNGRQFNGR 49 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHHHTTSEETTE
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 467789999999886442 3666779999998875 234444443
No 35
>PLN03120 nucleic acid binding protein; Provisional
Probab=56.05 E-value=44 Score=28.49 Aligned_cols=59 Identities=19% Similarity=0.108 Sum_probs=44.9
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecC------CcCEEEecCHHHHHHHHHhcCcccCCCCC
Q 043529 44 IIGNLNLIGPLPYRSIHALSEKYGPIMQLKFG------SFPVVVGSSVEMAEAFLKTHDALFSYRPK 104 (307)
Q Consensus 44 ilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg------~~~~Vvv~~~e~~~evl~~~~~~f~~R~~ 104 (307)
++||+..- --...+.+++..||+|-.+.+. +.-.|...+++.++.++.-++..+.+|+.
T Consensus 8 fVgNLs~~--tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~V 72 (260)
T PLN03120 8 KVSNVSLK--ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQSV 72 (260)
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCceE
Confidence 57777432 2244688889999999999873 34578888999999998878888888763
No 36
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=55.23 E-value=34 Score=30.42 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=42.3
Q ss_pred CcccccccCCCCchHHHHHHHHhhCCceEEecCCcC---------EEEecCHHHHHHHHH-hcCcccCCCC
Q 043529 43 PIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSFP---------VVVGSSVEMAEAFLK-THDALFSYRP 103 (307)
Q Consensus 43 PilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~~---------~Vvv~~~e~~~evl~-~~~~~f~~R~ 103 (307)
-++||++.- .-...+.+++.+||+|..+++...+ .|.-.+++.|..++. -++..+.+|+
T Consensus 272 lfV~NL~~~--~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr~ 340 (352)
T TIGR01661 272 IFVYNLSPD--TDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNRV 340 (352)
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 467777532 2345677888999999999875443 788888999888875 3666666664
No 37
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=52.31 E-value=25 Score=26.36 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=30.2
Q ss_pred CchHHHHHHHHhhCCceEEecCCcCEEEecCHHHHHHHHHh
Q 043529 54 LPYRSIHALSEKYGPIMQLKFGSFPVVVGSSVEMAEAFLKT 94 (307)
Q Consensus 54 ~~~~~~~~~~~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~ 94 (307)
+....+.+|.++||.+--. .+...+...|++.+++++..
T Consensus 75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 3456788999999987442 24578899999999999864
No 38
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=52.31 E-value=42 Score=21.22 Aligned_cols=54 Identities=22% Similarity=0.193 Sum_probs=36.4
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecCCc--------CEEEecCHHHHHHHHH-hcCccc
Q 043529 44 IIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSF--------PVVVGSSVEMAEAFLK-THDALF 99 (307)
Q Consensus 44 ilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~--------~~Vvv~~~e~~~evl~-~~~~~f 99 (307)
++||++.- --...+.++..+||++-.+++... =.|...+++.++.++. -++..+
T Consensus 2 ~v~nlp~~--~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~l~g~~~ 64 (70)
T PF00076_consen 2 YVGNLPPD--VTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEELNGKKI 64 (70)
T ss_dssp EEESETTT--SSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHHHTTEEE
T ss_pred EEcCCCCc--CCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHHcCCCEE
Confidence 45666432 123567888999999877765331 2788899999999987 344333
No 39
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=48.08 E-value=57 Score=25.04 Aligned_cols=59 Identities=19% Similarity=0.143 Sum_probs=39.8
Q ss_pred CcccccccCCCCchHHHHHHHHhhCCceEEecC---------CcCEEEecCHHHHHHHHHh-cCcccCCCC
Q 043529 43 PIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFG---------SFPVVVGSSVEMAEAFLKT-HDALFSYRP 103 (307)
Q Consensus 43 PilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg---------~~~~Vvv~~~e~~~evl~~-~~~~f~~R~ 103 (307)
-++||+..- .-...+.++.++||+|..+.+- +.=.|-..+++.|+.++.. ++..+.+|+
T Consensus 37 lfVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~lng~~i~Gr~ 105 (144)
T PLN03134 37 LFIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRH 105 (144)
T ss_pred EEEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 355666432 2355788899999999887763 1237888999999999964 344444543
No 40
>smart00362 RRM_2 RNA recognition motif.
Probab=46.44 E-value=69 Score=19.77 Aligned_cols=39 Identities=28% Similarity=0.287 Sum_probs=28.5
Q ss_pred hHHHHHHHHhhCCceEEecCCc-------CEEEecCHHHHHHHHHh
Q 043529 56 YRSIHALSEKYGPIMQLKFGSF-------PVVVGSSVEMAEAFLKT 94 (307)
Q Consensus 56 ~~~~~~~~~kYG~i~~~~lg~~-------~~Vvv~~~e~~~evl~~ 94 (307)
...+.++.++||++..+.+-.. -.|-..+++.++.++..
T Consensus 13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 4567778899999877765432 35777899999998754
No 41
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=46.04 E-value=14 Score=27.91 Aligned_cols=16 Identities=25% Similarity=0.114 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 043529 11 YLAAWLATLALILLSL 26 (307)
Q Consensus 11 ~~~~~~~~~~~~~l~~ 26 (307)
+++++++.++++++..
T Consensus 8 ii~~i~l~~~~~~~~~ 23 (130)
T PF12273_consen 8 IIVAILLFLFLFYCHN 23 (130)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 42
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=45.41 E-value=61 Score=25.08 Aligned_cols=56 Identities=21% Similarity=0.231 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCcccccccCCCCchHHHHHHH-HhhCCceEEecCCcCEEEecCHHHHHHHHH
Q 043529 32 ELNLPPGPKPWPIIGNLNLIGPLPYRSIHALS-EKYGPIMQLKFGSFPVVVGSSVEMAEAFLK 93 (307)
Q Consensus 32 ~~~lpPgP~~lPilGn~~~l~~~~~~~~~~~~-~kYG~i~~~~lg~~~~Vvv~~~e~~~evl~ 93 (307)
...+|.|+...|+++|+... .+.++. +..+.+..++.-..-+++..+.+.+++++.
T Consensus 51 ~~GlpqG~~lS~~L~~~~l~------~~d~~i~~~~~~~~~~RY~DD~~i~~~~~~~~~~~~~ 107 (158)
T cd01646 51 TNGLPIGPLTSRFLANIYLN------DVDHELKSKLKGVDYVRYVDDIRIFADSKEEAEEILE 107 (158)
T ss_pred CceEccCcchHHHHHHHHHH------HHHHHHHhccCCceEEEecCcEEEEcCCHHHHHHHHH
Confidence 34679999999999997321 122222 325666666666656777788787766553
No 43
>PF07912 ERp29_N: ERp29, N-terminal domain; InterPro: IPR012883 ERp29 (P52555 from SWISSPROT) is a ubiquitously expressed endoplasmic reticulum protein, and is involved in the processes of protein maturation and protein secretion in this organelle [, ]. The protein exists as a homodimer, with each monomer being composed of two domains. The N-terminal domain featured in this family is organised into a thioredoxin-like fold that resembles the a domain of human protein disulphide isomerase (PDI) []. However, this domain lacks the C-X-X-C motif required for the redox function of PDI; it is therefore thought that the function of ERp29 is similar to the chaperone function of PDI []. The N-terminal domain is exclusively responsible for the homodimerisation of the protein, without covalent linkages or additional contacts with other domains []. ; GO: 0009306 protein secretion, 0005788 endoplasmic reticulum lumen; PDB: 2QC7_B 1G7E_A 2C0G_B 1OVN_A 2C0F_A 2C0E_A 2C1Y_B.
Probab=42.81 E-value=1.2e+02 Score=22.75 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=28.5
Q ss_pred HHHHHhhC------CceEEecCC-cCEEEe-----cCHHHHHHHHHhcCcccCCCC
Q 043529 60 HALSEKYG------PIMQLKFGS-FPVVVG-----SSVEMAEAFLKTHDALFSYRP 103 (307)
Q Consensus 60 ~~~~~kYG------~i~~~~lg~-~~~Vvv-----~~~e~~~evl~~~~~~f~~R~ 103 (307)
.+++++|| |++.++.|+ .+-|-- -..+.++..+.++...|-++|
T Consensus 71 ~~Laery~i~ke~fPv~~LF~~~~~~pv~~p~~~~~t~~~l~~fvk~~t~~yiglp 126 (126)
T PF07912_consen 71 MELAERYKIDKEDFPVIYLFVGDKEEPVRYPFDGDVTADNLQRFVKSNTGLYIGLP 126 (126)
T ss_dssp HHHHHHTT-SCCC-SEEEEEESSTTSEEEE-TCS-S-HHHHHHHHHHTSS--TTST
T ss_pred HHHHHHhCCCcccCCEEEEecCCCCCCccCCccCCccHHHHHHHHHhCCCeeecCC
Confidence 46788887 888888754 445544 345777777887777776664
No 44
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=40.14 E-value=1.1e+02 Score=28.77 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=28.0
Q ss_pred hhCCceEEecCCcCEEEecCHHHHHHHHHhcCcccCC
Q 043529 65 KYGPIMQLKFGSFPVVVGSSVEMAEAFLKTHDALFSY 101 (307)
Q Consensus 65 kYG~i~~~~lg~~~~Vvv~~~e~~~evl~~~~~~f~~ 101 (307)
+||.|++-.+-++.+-|--=|+--|+=+..+.+.|+.
T Consensus 222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l 258 (534)
T KOG3653|consen 222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL 258 (534)
T ss_pred ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence 6888888888777777777777777777766677775
No 45
>PF11829 DUF3349: Protein of unknown function (DUF3349); InterPro: IPR021784 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 99 to 124 amino acids in length. ; PDB: 2KVC_A 3OL3_B 3OL4_A 2LKY_A.
Probab=37.29 E-value=88 Score=22.25 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHhhhcCCCCccccCchHHHHHHHHHHhhccCC
Q 043529 246 DRLFEYELDEHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQNSCRYGHG 306 (307)
Q Consensus 246 ~~~~~~~i~~~~~~~~~~~~~~~~d~ld~ll~~~~~~~~~~~lt~~~i~~~~~~l~~aG~~ 306 (307)
..++.+++.--+.-+. ++....||+-.|-=+ ...||++|+...+..+.--|+.
T Consensus 2 ~~~l~~iv~WLRaGYP--~GvP~~Dy~PLlALL------~r~Ltd~ev~~Va~~L~~~~~~ 54 (96)
T PF11829_consen 2 PSFLASIVDWLRAGYP--EGVPPTDYVPLLALL------RRRLTDDEVAEVAAELAARGDP 54 (96)
T ss_dssp HHHHHHHHHHHHHH-T--T-B-HHHHHHHHHHH------TTTS-HHHHHHHHHHHHHHTSS
T ss_pred ChHHHHHHHHHHccCC--CCCCCCccHHHHHHh------cccCCHHHHHHHHHHHHhcCCC
Confidence 3456666666666663 344456665443221 1247888888877777666543
No 46
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.35 E-value=55 Score=24.45 Aligned_cols=10 Identities=30% Similarity=0.388 Sum_probs=4.6
Q ss_pred HHHHHHHhhc
Q 043529 21 LILLSLRLRR 30 (307)
Q Consensus 21 ~~~l~~~~~~ 30 (307)
+.|+.+|+++
T Consensus 84 i~y~irR~~K 93 (122)
T PF01102_consen 84 ISYCIRRLRK 93 (122)
T ss_dssp HHHHHHHHS-
T ss_pred HHHHHHHHhc
Confidence 3455555543
No 47
>smart00360 RRM RNA recognition motif.
Probab=36.19 E-value=1e+02 Score=18.79 Aligned_cols=38 Identities=26% Similarity=0.241 Sum_probs=28.0
Q ss_pred HHHHHHHHhhCCceEEecCCc---------CEEEecCHHHHHHHHHh
Q 043529 57 RSIHALSEKYGPIMQLKFGSF---------PVVVGSSVEMAEAFLKT 94 (307)
Q Consensus 57 ~~~~~~~~kYG~i~~~~lg~~---------~~Vvv~~~e~~~evl~~ 94 (307)
..+.++.++||++..+++-.. -.|...+++.++.++..
T Consensus 11 ~~l~~~f~~~g~v~~~~i~~~~~~~~~~~~a~v~f~~~~~a~~a~~~ 57 (71)
T smart00360 11 EELRELFSKFGKIESVRLVRDKDTGKSKGFAFVEFESEEDAEKALEA 57 (71)
T ss_pred HHHHHHHHhhCCEeEEEEEeCCCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 456778889999888775432 24667899999988753
No 48
>cd00590 RRM RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA processing, RNA export, and RNA stability. This domain is 90 amino acids in length and consists of a four-stranded beta-sheet packed against two alpha-helices. RRM usually interacts with ssRNA, but is also known to interact with ssDNA as well as proteins. RRM binds a variable number of nucleotides, ranging from two to eight. The active site includes three aromatic side-chains located within the conserved RNP1 and RNP2 motifs of the domain. The RRM domain is found in a variety heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing, and protein components of small nuclear ribonucleoproteins (snRNPs).
Probab=28.12 E-value=1.5e+02 Score=18.22 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhCCceEEecCCc--------CEEEecCHHHHHHHHHhc
Q 043529 56 YRSIHALSEKYGPIMQLKFGSF--------PVVVGSSVEMAEAFLKTH 95 (307)
Q Consensus 56 ~~~~~~~~~kYG~i~~~~lg~~--------~~Vvv~~~e~~~evl~~~ 95 (307)
...+.++.++||++..+.+-.. -.|-..+++.++.++...
T Consensus 13 ~~~i~~~~~~~g~i~~~~~~~~~~~~~~~~~~v~f~s~~~a~~a~~~~ 60 (74)
T cd00590 13 EEDLRELFSKFGKVESVRIVRDKDTKSKGFAFVEFEDEEDAEKALEAL 60 (74)
T ss_pred HHHHHHHHHhcCCEEEEEEeeCCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 4567788888999988776432 256678999999998643
No 49
>PF15050 SCIMP: SCIMP protein
Probab=27.96 E-value=1.1e+02 Score=22.70 Aligned_cols=14 Identities=36% Similarity=0.541 Sum_probs=8.3
Q ss_pred CCCCC-CCCCccccc
Q 043529 35 LPPGP-KPWPIIGNL 48 (307)
Q Consensus 35 lpPgP-~~lPilGn~ 48 (307)
+||-| .++|+.|..
T Consensus 69 LPpLPPRg~~s~~~~ 83 (133)
T PF15050_consen 69 LPPLPPRGSPSPEDS 83 (133)
T ss_pred CCCCCCCCCCCcccc
Confidence 46654 457777764
No 50
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=27.32 E-value=1.6e+02 Score=21.37 Aligned_cols=11 Identities=45% Similarity=0.525 Sum_probs=8.0
Q ss_pred CCCcccccccC
Q 043529 41 PWPIIGNLNLI 51 (307)
Q Consensus 41 ~lPilGn~~~l 51 (307)
.-|+-||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 47888998654
No 51
>PF14605 Nup35_RRM_2: Nup53/35/40-type RNA recognition motif
Probab=23.87 E-value=1.9e+02 Score=17.81 Aligned_cols=34 Identities=18% Similarity=0.082 Sum_probs=23.9
Q ss_pred HHHHHHHhhCCceEEecC-CcCEEEec--CHHHHHHH
Q 043529 58 SIHALSEKYGPIMQLKFG-SFPVVVGS--SVEMAEAF 91 (307)
Q Consensus 58 ~~~~~~~kYG~i~~~~lg-~~~~Vvv~--~~e~~~ev 91 (307)
...+....+|.|...+++ ..+.+.+. +...++.+
T Consensus 16 ~vl~~F~~fGeI~~~~~~~~~~~~~l~y~~~~~ae~A 52 (53)
T PF14605_consen 16 EVLEHFASFGEIVDIYVPESTNWMYLKYKSRKDAEKA 52 (53)
T ss_pred HHHHHHHhcCCEEEEEcCCCCcEEEEEECCHHHHHhh
Confidence 344456679999999998 46776666 66666554
No 52
>PF00745 GlutR_dimer: Glutamyl-tRNAGlu reductase, dimerisation domain; InterPro: IPR015896 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents the helical dimerisation domain of glutamyl-tRNA reductase (1.2.1.70 from EC) []. This enzyme reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway [, ]. The enzyme requires NADPH as a cofactor.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process, 0055114 oxidation-reduction process; PDB: 1GPJ_A.
Probab=23.22 E-value=2.7e+02 Score=19.38 Aligned_cols=83 Identities=22% Similarity=0.202 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHhhcCHHHH-HhhHHHHHHHHHHHHHHHHhhcCCceechHHHHHHHHHHHHHHHhcCccccchhhHHHHH
Q 043529 126 YWRQLRKICLMELFTAKRL-NSYEYIRVEETMLFLRNLYESSGKPIILKDNLLDLNLEVMSRMVLGKKYTNEIVARHEFK 204 (307)
Q Consensus 126 ~wk~~Rr~~~~~~~~~~~l-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~ 204 (307)
.|...|++. |.. ..+ ...+.+.+.+.+.+...+.....+.-.+.....+++-.++...+...+-...+.....+.
T Consensus 16 ~w~~~~~~~--p~I--~~l~~~~e~i~~~el~~~~~~l~~~~~~~~~i~~~~~~~~~Kllh~p~~~Lr~~a~~~~~~~~~ 91 (101)
T PF00745_consen 16 RWLKSRKVD--PVI--KALREKAEEIRDEELERALKKLDLDEDDEEVIEKLTRSLVNKLLHPPISNLREAAEEGDGDEYL 91 (101)
T ss_dssp HHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHS-S----------TTHHHHHHHHHHHHHHHHHHSS-TTTT-THHH
T ss_pred HHHHhcchH--HHH--HHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 677777664 321 111 233445555555555442211111122334455555555555555544332222224555
Q ss_pred HHHHHHHH
Q 043529 205 EMADELFI 212 (307)
Q Consensus 205 ~~~~~~~~ 212 (307)
+.+..+|.
T Consensus 92 ~~l~~lF~ 99 (101)
T PF00745_consen 92 EALRKLFG 99 (101)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 55555554
No 53
>PF14259 RRM_6: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=22.98 E-value=1.2e+02 Score=19.30 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=34.2
Q ss_pred ccccccCCCCchHHHHHHHHhhCCceEEecCCc--------CEEEecCHHHHHHHHHhcC
Q 043529 45 IGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSF--------PVVVGSSVEMAEAFLKTHD 96 (307)
Q Consensus 45 lGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~--------~~Vvv~~~e~~~evl~~~~ 96 (307)
++|++.- .....+.++...||+|-.+.+... =.|-..+++.+++++....
T Consensus 3 i~nlp~~--~~~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~~ 60 (70)
T PF14259_consen 3 ISNLPPS--TTEEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELLN 60 (70)
T ss_dssp EESSTTT----HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred EeCCCCC--CCHHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHCC
Confidence 5555432 123567778888999877775432 2788899999999997543
No 54
>PHA03049 IMV membrane protein; Provisional
Probab=22.80 E-value=2.3e+02 Score=18.52 Aligned_cols=13 Identities=23% Similarity=0.652 Sum_probs=6.5
Q ss_pred CCCCCCCCccccc
Q 043529 36 PPGPKPWPIIGNL 48 (307)
Q Consensus 36 pPgP~~lPilGn~ 48 (307)
||.|...+-.-++
T Consensus 33 ~p~~e~ye~~e~~ 45 (68)
T PHA03049 33 PPSQEKYEKMEDL 45 (68)
T ss_pred CCChhhccCchhh
Confidence 4555555444443
No 55
>PHA01327 hypothetical protein
Probab=22.22 E-value=39 Score=19.65 Aligned_cols=20 Identities=15% Similarity=0.265 Sum_probs=14.5
Q ss_pred cceEeccCChhHHHHHHHHH
Q 043529 116 SNITWSQYGPYWRQLRKICL 135 (307)
Q Consensus 116 ~~~~~~~~G~~wk~~Rr~~~ 135 (307)
++.+....|++|.+.|.-|.
T Consensus 11 r~~vinehge~wqer~drmk 30 (49)
T PHA01327 11 RNNVINEHGEEWQERKDRMK 30 (49)
T ss_pred cchHHHhhHHHHHHHHHHHH
Confidence 34455567999999987663
No 56
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=22.16 E-value=2.4e+02 Score=25.26 Aligned_cols=50 Identities=20% Similarity=0.168 Sum_probs=36.0
Q ss_pred CcccccccCCCCchHHHHHHHHhhCCceEEecCCc---------CEEEecCHHHHHHHHHh
Q 043529 43 PIIGNLNLIGPLPYRSIHALSEKYGPIMQLKFGSF---------PVVVGSSVEMAEAFLKT 94 (307)
Q Consensus 43 PilGn~~~l~~~~~~~~~~~~~kYG~i~~~~lg~~---------~~Vvv~~~e~~~evl~~ 94 (307)
-++||+..- .....+.+++.+||.|..+++-.. =.|-..+.+.|++++..
T Consensus 196 lfV~nLp~~--vtee~L~~~F~~fG~V~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 254 (346)
T TIGR01659 196 LYVTNLPRT--ITDDQLDTIFGKYGQIVQKNILRDKLTGTPRGVAFVRFNKREEAQEAISA 254 (346)
T ss_pred eEEeCCCCc--ccHHHHHHHHHhcCCEEEEEEeecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 467776432 124568888999999988775432 27888999999998864
No 57
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=22.12 E-value=72 Score=26.09 Aligned_cols=29 Identities=14% Similarity=0.413 Sum_probs=26.3
Q ss_pred hhCCceEEecCCcCEEEecCHHHHHHHHH
Q 043529 65 KYGPIMQLKFGSFPVVVGSSVEMAEAFLK 93 (307)
Q Consensus 65 kYG~i~~~~lg~~~~Vvv~~~e~~~evl~ 93 (307)
+|..+.-++.|++-+++..|++.+++++.
T Consensus 135 ~y~~l~plfvgnh~ill~~d~~kik~~lr 163 (245)
T KOG4241|consen 135 PYSSLNPLFVGNHAILLAKDISKIKSILR 163 (245)
T ss_pred chhhhhhheeccceEEEcCChHHHHHHHH
Confidence 37788889999999999999999999996
No 58
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=21.13 E-value=1.9e+02 Score=22.67 Aligned_cols=14 Identities=36% Similarity=0.468 Sum_probs=6.5
Q ss_pred CCCCCCC---CCCcccc
Q 043529 34 NLPPGPK---PWPIIGN 47 (307)
Q Consensus 34 ~lpPgP~---~lPilGn 47 (307)
+.||-|. +-|--||
T Consensus 177 rsppepsgdgG~~~~G~ 193 (215)
T PF05084_consen 177 RSPPEPSGDGGGNDAGN 193 (215)
T ss_pred CCCCCCCCCCCCCcccc
Confidence 3455554 3444444
No 59
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=20.55 E-value=2e+02 Score=20.82 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 043529 8 WAYYLAAWLATLALILLSLR 27 (307)
Q Consensus 8 ~~~~~~~~~~~~~~~~l~~~ 27 (307)
+++.++++++++++|+++.+
T Consensus 56 ~~~~~~w~~~A~~ly~~RP~ 75 (103)
T PF11027_consen 56 FMMMMLWMVLAMALYLLRPS 75 (103)
T ss_pred HHHHHHHHHHHHHHHHcCch
Confidence 44445555555665555543
No 60
>PF09061 Stirrup: Stirrup; InterPro: IPR015146 The Stirrup domain, found in the prokaryotic protein ribonucleotide reductase, has a molecular mass of 9 kDa and is folded into an alpha/beta structure. It allows for binding of the reductase to DNA via electrostatic interactions, since it has a predominance of positive charges distributed on its surface []. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1DQ3_A.
Probab=20.32 E-value=2.2e+02 Score=18.48 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=16.3
Q ss_pred hHHHHHHHHhhCCceEEecCCcCEEEe
Q 043529 56 YRSIHALSEKYGPIMQLKFGSFPVVVG 82 (307)
Q Consensus 56 ~~~~~~~~~kYG~i~~~~lg~~~~Vvv 82 (307)
...|.+|+.+||-=|..+ |.+...+|
T Consensus 9 f~afk~was~ygvefktn-gsqtlaii 34 (79)
T PF09061_consen 9 FNAFKEWASKYGVEFKTN-GSQTLAII 34 (79)
T ss_dssp HHHHHHHHHTTT-EEEEE-TTEEEEEE
T ss_pred HHHHHHHHHHhCeEEecC-CceEEEee
Confidence 467899999999666553 44433333
Done!