BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043530
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 140/346 (40%), Gaps = 85/346 (24%)
Query: 70 LTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKD-------AIEMPTL-EP 121
S++ + +P+Y+F TS+ L+L +S + D + +P +
Sbjct: 123 FCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQ 182
Query: 122 IPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVXXXX 181
+P + F ++ ++ + A++ ++ GI+VN +E ++ L
Sbjct: 183 VPSNVLPDACFNKDGGYI--AYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 240
Query: 182 XXXXXXXXXXXXXFEKSQP------------LAWLDDQATGSVVDVSFGSR-TAMSREQL 228
K QP L WLD+Q SVV + FGS + Q+
Sbjct: 241 IYAVGPLLDL-----KGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQI 295
Query: 229 RELGDG---------------------------------------------------GFL 237
RE+ G GF+
Sbjct: 296 REIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFV 355
Query: 238 TYCGWNSVTKAMWNGVQVLAWPQHGDQKINA-DVVERTGMGIWVQSWGWGGEAIMKGEQI 296
++CGWNS+ ++MW GV +L WP + +Q++NA +V+ G+G+ ++ G ++ E+I
Sbjct: 356 SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEI 415
Query: 297 AENISEMMGNELL---RIQEMRIREEARTAIEQGGSLKKRLTELVE 339
+ + ++M + + ++QEM +E +R A+ GGS + +L++
Sbjct: 416 EKGLKDLMDKDSIVHKKVQEM--KEMSRNAVVDGGSSLISVGKLID 459
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 135/336 (40%), Gaps = 85/336 (25%)
Query: 70 LTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKD-------AIEMPTL-EP 121
S++ + +P+Y+F TS+ L+L +S + D + +P +
Sbjct: 123 FCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQ 182
Query: 122 IPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVXXXX 181
+P + F ++ ++ + A++ ++ GI+VN +E ++ L
Sbjct: 183 VPSNVLPDACFNKDGGYI--AYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 240
Query: 182 XXXXXXXXXXXXXFEKSQP------------LAWLDDQATGSVVDVSFGSR-TAMSREQL 228
K QP L WLD+Q SVV + FGS + Q+
Sbjct: 241 IYAVGPLLDL-----KGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQI 295
Query: 229 RELGDG---------------------------------------------------GFL 237
RE+ G GF+
Sbjct: 296 REIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFV 355
Query: 238 TYCGWNSVTKAMWNGVQVLAWPQHGDQKINA-DVVERTGMGIWVQSWGWGGEAIMKGEQI 296
++CGWNS+ ++MW GV +L WP + +Q++NA +V+ G+G+ ++ G ++ E+I
Sbjct: 356 SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEI 415
Query: 297 AENISEMMGNELL---RIQEMRIREEARTAIEQGGS 329
+ + ++M + + ++QEM +E +R A+ GGS
Sbjct: 416 EKGLKDLMDKDSIVHKKVQEM--KEMSRNAVVDGGS 449
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 142/364 (39%), Gaps = 100/364 (27%)
Query: 65 VTDMTLTASVLPISRAINVPNYIFFTSSAKML---TLFVSFHTHTLVGSKDAIEMP--TL 119
V+D ++ ++ + +PN ++F+SSA L F SF ++ KD + L
Sbjct: 123 VSDCCMSFTI-QAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCL 181
Query: 120 EPIPKPWILPPL----FQDMNNFLKTS---------FIENAKKMTESDGILVNISKTIEG 166
E WI P L +D+ +F++T+ FIE A ++ + IL+N +E
Sbjct: 182 E-TKVDWI-PGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELES 239
Query: 167 KTLAELNG------------GKVXXXXXXXXXXXXXXXXXFEKSQPLAWLDDQATGSVVD 214
+ L+ + E ++ L WL+ + GSVV
Sbjct: 240 DVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVY 299
Query: 215 VSFGSRTAMSREQL-----------------------------------RELGD------ 233
V+FGS T M+ EQL E+ D
Sbjct: 300 VNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIAS 359
Query: 234 -------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWV 280
GGFLT+CGWNS T+++ GV +L WP DQ + +
Sbjct: 360 WCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFI--------C 411
Query: 281 QSWGWGGE--AIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLT 335
W G E +K E++A+ I+E++ + ++ + M ++++A GG L
Sbjct: 412 NEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLN 471
Query: 336 ELVE 339
++++
Sbjct: 472 KVIK 475
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVV-ERTGMGIWVQSWGWGGEAIMK 292
GGFLT+CGWNS +++ +G+ ++AWP + +QK+NA ++ E + ++ G + +++
Sbjct: 359 GGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA---GDDGLVR 415
Query: 293 GEQIAENISEMMGNEL---LRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342
E++A + +M E +R + ++E A ++ G+ K L+ + WK
Sbjct: 416 REEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 77 ISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIE------MPTLEPIPKPWILPP 130
++ +VP YIF+ ++A +L+ F+ S + E +P P+ L P
Sbjct: 126 VAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDP 185
Query: 131 LFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVXXXXXX----XXX 186
QD + + N K+ E++GILVN +E + L +
Sbjct: 186 A-QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVN 244
Query: 187 XXXXXXXXFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGDG 234
E+S+ L WLD+Q GSV+ VSFGS ++ EQL EL G
Sbjct: 245 IGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALG 292
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 226 EQLRELGDGGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWG 284
E L+ G FLT+ GWNSV + + GV +++ P GDQ +N + E +G+ V +
Sbjct: 339 EILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGV 398
Query: 285 WGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340
E+I K ++ + SE G ++R + ++++E A A+EQ G+ T L+++
Sbjct: 399 LTKESIKKALELTMS-SEKGG--IMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQI 451
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGGEAIMK 292
G F+T+CGWNS+ +++ GV ++ P GDQ++N +VE +G+ ++ + +M
Sbjct: 345 GAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMS 404
Query: 293 G-EQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340
+QI +S+ G + LR +RE A A+ GS + LV++
Sbjct: 405 CFDQI---LSQEKGKK-LRENLRALRETADRAVGPKGSSTENFITLVDL 449
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 235 GFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMG 277
F+T+ G S +A+ N V ++A PQ +Q +NA+ + G+G
Sbjct: 324 AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLG 366
>pdb|2ZCI|A Chain A, Structure Of A Gtp-Dependent Bacterial Pep-Carboxykinase
From Corynebacterium Glutamicum
pdb|2ZCI|B Chain B, Structure Of A Gtp-Dependent Bacterial Pep-Carboxykinase
From Corynebacterium Glutamicum
pdb|2ZCI|C Chain C, Structure Of A Gtp-Dependent Bacterial Pep-Carboxykinase
From Corynebacterium Glutamicum
pdb|2ZCI|D Chain D, Structure Of A Gtp-Dependent Bacterial Pep-Carboxykinase
From Corynebacterium Glutamicum
Length = 610
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 221 TAMSREQLRELGDGGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWV 280
T M E L ++G G C +SV + G + +AWP + + I + IW
Sbjct: 161 TRMGIEALDKIGANGSFVRC-LHSVGAPLEPGQEDVAWPCNDTKYITQFPETKE---IWS 216
Query: 281 QSWGWGGEAIMKGEQIAENISEMMGNE 307
G+GG AI+ + A I+ +M E
Sbjct: 217 YGSGYGGNAILAKKCYALRIASVMARE 243
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + ++F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + ++F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 72 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 131
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 84 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 143
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 66 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 70 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 129
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 61 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 120
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQ-DMNNFLKTSFIEN 146
+ + + + + + F ++G D I PT+E + +I+ L + D+ LKT + N
Sbjct: 68 YXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,951,435
Number of Sequences: 62578
Number of extensions: 320133
Number of successful extensions: 733
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 710
Number of HSP's gapped (non-prelim): 44
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)