Query 043530
Match_columns 343
No_of_seqs 154 out of 1406
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:58:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043530.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043530hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 3.8E-59 8.3E-64 443.0 28.6 320 9-342 6-449 (451)
2 PLN02207 UDP-glycosyltransfera 100.0 3.9E-59 8.5E-64 442.8 28.4 328 9-343 2-465 (468)
3 PLN02863 UDP-glucoronosyl/UDP- 100.0 5.1E-59 1.1E-63 445.0 29.0 331 5-343 4-471 (477)
4 PLN02210 UDP-glucosyl transfer 100.0 9.9E-59 2.2E-63 441.6 29.3 327 7-343 5-455 (456)
5 PLN02173 UDP-glucosyl transfer 100.0 1E-58 2.2E-63 438.3 28.6 323 8-343 3-448 (449)
6 PLN02562 UDP-glycosyltransfera 100.0 2E-58 4.4E-63 439.0 29.0 325 7-342 3-448 (448)
7 PLN02992 coniferyl-alcohol glu 100.0 3.5E-58 7.5E-63 437.2 28.3 330 8-343 3-469 (481)
8 PLN02555 limonoid glucosyltran 100.0 1.3E-57 2.9E-62 434.1 30.2 326 9-343 6-469 (480)
9 PLN00164 glucosyltransferase; 100.0 5.3E-58 1.2E-62 439.2 26.8 332 9-343 2-473 (480)
10 PLN03015 UDP-glucosyl transfer 100.0 3.1E-57 6.7E-62 428.4 27.4 329 10-342 3-467 (470)
11 PLN02152 indole-3-acetate beta 100.0 4.4E-57 9.6E-62 427.9 27.2 317 10-342 3-455 (455)
12 PLN02554 UDP-glycosyltransfera 100.0 4.1E-57 8.8E-62 434.5 27.2 328 10-343 2-478 (481)
13 PLN03004 UDP-glycosyltransfera 100.0 3.1E-57 6.8E-62 428.5 25.2 315 10-332 3-450 (451)
14 PLN02208 glycosyltransferase f 100.0 1.1E-56 2.4E-61 425.2 27.3 313 9-343 3-439 (442)
15 PLN02167 UDP-glycosyltransfera 100.0 6.3E-57 1.4E-61 432.5 25.9 329 9-343 2-472 (475)
16 PLN02534 UDP-glycosyltransfera 100.0 2.5E-56 5.4E-61 426.0 28.6 327 8-342 6-485 (491)
17 PLN02448 UDP-glycosyltransfera 100.0 2.5E-56 5.4E-61 427.4 28.5 330 7-343 7-457 (459)
18 PLN03007 UDP-glucosyltransfera 100.0 2.5E-55 5.5E-60 422.5 30.1 328 8-343 3-480 (482)
19 PLN02670 transferase, transfer 100.0 9.2E-56 2E-60 420.2 26.3 324 8-343 4-465 (472)
20 PLN02764 glycosyltransferase f 100.0 1.2E-54 2.6E-59 409.6 29.9 316 8-343 3-445 (453)
21 PLN00414 glycosyltransferase f 100.0 1.5E-54 3.2E-59 411.1 26.4 313 8-343 2-440 (446)
22 PF00201 UDPGT: UDP-glucoronos 100.0 1E-43 2.3E-48 346.3 -2.2 293 12-328 2-431 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 3.5E-39 7.7E-44 311.3 23.4 291 10-323 20-449 (507)
24 TIGR01426 MGT glycosyltransfer 100.0 4.3E-34 9.3E-39 270.4 22.9 289 16-340 1-389 (392)
25 KOG1192 UDP-glucuronosyl and U 100.0 5E-34 1.1E-38 278.0 17.2 295 10-323 5-439 (496)
26 cd03784 GT1_Gtf_like This fami 100.0 1.8E-32 4E-37 260.0 23.4 274 11-321 1-386 (401)
27 COG1819 Glycosyl transferases, 100.0 4.4E-31 9.6E-36 248.6 15.1 142 183-340 214-397 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 1.5E-19 3.3E-24 166.2 16.8 64 234-303 252-317 (318)
29 PRK12446 undecaprenyldiphospho 99.8 1.3E-17 2.8E-22 155.1 18.4 76 234-315 254-335 (352)
30 TIGR00661 MJ1255 conserved hyp 99.7 1.8E-15 3.9E-20 139.4 16.4 68 234-310 249-318 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.6 3.1E-13 6.7E-18 124.9 20.5 67 234-306 254-324 (357)
32 PRK00726 murG undecaprenyldiph 99.5 1.7E-12 3.7E-17 121.3 18.7 99 234-342 254-356 (357)
33 cd03785 GT1_MurG MurG is an N- 99.3 7.6E-11 1.7E-15 109.7 18.6 76 234-315 254-333 (350)
34 TIGR00215 lpxB lipid-A-disacch 99.3 3.9E-11 8.4E-16 113.2 15.9 99 234-339 269-384 (385)
35 TIGR01133 murG undecaprenyldip 99.2 8.3E-10 1.8E-14 102.6 17.0 76 234-315 252-330 (348)
36 PRK13609 diacylglycerol glucos 99.2 4.9E-09 1.1E-13 98.9 21.3 93 234-340 275-368 (380)
37 PF04101 Glyco_tran_28_C: Glyc 99.1 3.9E-11 8.5E-16 99.8 3.1 70 234-309 74-147 (167)
38 PRK13608 diacylglycerol glucos 99.1 1.7E-08 3.7E-13 95.6 21.0 92 234-339 275-367 (391)
39 PRK00025 lpxB lipid-A-disaccha 98.9 1E-07 2.2E-12 89.8 18.9 100 234-341 263-375 (380)
40 TIGR03590 PseG pseudaminic aci 98.9 1.2E-08 2.6E-13 92.0 11.3 36 234-270 243-278 (279)
41 COG4671 Predicted glycosyl tra 98.9 9.3E-08 2E-12 85.7 16.2 66 234-305 296-364 (400)
42 PF03033 Glyco_transf_28: Glyc 98.6 2.4E-08 5.2E-13 80.2 2.0 79 13-92 1-131 (139)
43 cd03814 GT1_like_2 This family 98.6 3.2E-05 6.9E-10 71.4 22.8 101 224-340 256-362 (364)
44 COG3980 spsG Spore coat polysa 98.4 8.2E-05 1.8E-09 65.2 18.8 78 234-319 229-306 (318)
45 PLN02871 UDP-sulfoquinovose:DA 98.2 0.0006 1.3E-08 66.2 22.4 72 234-317 333-411 (465)
46 PLN02605 monogalactosyldiacylg 98.1 3E-05 6.4E-10 73.3 10.6 93 234-340 284-378 (382)
47 cd03808 GT1_cap1E_like This fa 98.0 0.0012 2.6E-08 60.3 20.9 68 234-313 265-336 (359)
48 cd03823 GT1_ExpE7_like This fa 98.0 0.00044 9.6E-09 63.5 17.2 79 225-315 253-338 (359)
49 cd03817 GT1_UGDG_like This fam 98.0 0.0042 9.2E-08 57.1 22.8 64 234-310 280-347 (374)
50 cd03825 GT1_wcfI_like This fam 97.9 0.012 2.7E-07 54.3 25.2 102 225-341 255-362 (365)
51 cd03800 GT1_Sucrose_synthase T 97.9 0.002 4.3E-08 60.6 19.6 68 234-313 304-375 (398)
52 COG1519 KdtA 3-deoxy-D-manno-o 97.9 0.0035 7.6E-08 58.4 20.0 76 234-320 325-400 (419)
53 KOG3349 Predicted glycosyltran 97.9 3.7E-05 7.9E-10 60.8 5.9 46 234-279 82-131 (170)
54 cd03820 GT1_amsD_like This fam 97.8 0.011 2.3E-07 53.6 22.4 66 242-319 266-332 (348)
55 TIGR03492 conserved hypothetic 97.7 0.00021 4.5E-09 67.8 10.2 93 234-339 298-394 (396)
56 cd03811 GT1_WabH_like This fam 97.5 0.032 6.9E-07 50.6 20.3 64 240-315 275-341 (353)
57 PF04007 DUF354: Protein of un 97.3 0.013 2.8E-07 54.0 15.4 70 21-92 10-113 (335)
58 COG5017 Uncharacterized conser 97.1 0.0042 9.1E-08 48.5 8.3 56 225-280 56-121 (161)
59 PF13844 Glyco_transf_41: Glyc 97.0 0.0053 1.1E-07 58.8 10.5 67 238-313 370-437 (468)
60 PRK05749 3-deoxy-D-manno-octul 97.0 0.0063 1.4E-07 58.3 11.1 67 241-317 333-399 (425)
61 TIGR00236 wecB UDP-N-acetylglu 96.8 0.0031 6.6E-08 59.1 6.9 88 234-339 276-363 (365)
62 PF02684 LpxB: Lipid-A-disacch 96.7 0.17 3.6E-06 47.5 17.4 99 234-333 262-367 (373)
63 cd04946 GT1_AmsK_like This fam 96.3 0.017 3.8E-07 55.0 8.5 83 242-338 324-406 (407)
64 PRK15484 lipopolysaccharide 1, 96.2 0.067 1.4E-06 50.5 11.9 104 223-341 265-375 (380)
65 PF00534 Glycos_transf_1: Glyc 96.1 0.021 4.5E-07 47.0 7.1 64 240-315 104-167 (172)
66 cd03801 GT1_YqgM_like This fam 96.0 0.057 1.2E-06 49.1 10.0 86 240-340 287-372 (374)
67 cd03807 GT1_WbnK_like This fam 95.9 0.05 1.1E-06 49.6 9.5 89 234-339 270-362 (365)
68 PRK14089 ipid-A-disaccharide s 95.9 0.03 6.6E-07 52.0 7.9 96 234-337 237-344 (347)
69 cd05844 GT1_like_7 Glycosyltra 95.9 0.046 1E-06 50.7 9.1 60 241-312 283-342 (367)
70 PF13524 Glyco_trans_1_2: Glyc 95.8 0.15 3.2E-06 37.3 9.8 82 239-338 9-91 (92)
71 PRK09814 beta-1,6-galactofuran 95.7 0.044 9.6E-07 50.7 8.1 78 245-340 253-332 (333)
72 cd03821 GT1_Bme6_like This fam 95.4 0.08 1.7E-06 48.5 8.7 61 242-316 295-355 (375)
73 cd03818 GT1_ExpC_like This fam 95.4 0.061 1.3E-06 50.9 8.1 79 243-336 315-393 (396)
74 TIGR03088 stp2 sugar transfera 95.4 0.11 2.3E-06 48.7 9.6 85 240-339 284-368 (374)
75 cd03798 GT1_wlbH_like This fam 95.3 0.15 3.3E-06 46.5 10.2 74 224-309 268-347 (377)
76 cd03792 GT1_Trehalose_phosphor 95.2 0.3 6.5E-06 45.7 12.1 112 210-341 252-369 (372)
77 TIGR03087 stp1 sugar transfera 95.2 0.14 3E-06 48.5 9.7 90 234-340 299-393 (397)
78 TIGR02472 sucr_P_syn_N sucrose 95.2 0.12 2.7E-06 49.7 9.4 92 234-340 342-437 (439)
79 cd03794 GT1_wbuB_like This fam 95.1 0.11 2.4E-06 47.8 8.7 64 243-318 314-377 (394)
80 cd03822 GT1_ecORF704_like This 95.1 0.15 3.2E-06 46.9 9.4 82 241-339 282-363 (366)
81 TIGR02149 glgA_Coryne glycogen 95.1 0.17 3.6E-06 47.5 9.9 83 224-312 270-358 (388)
82 PRK15427 colanic acid biosynth 95.1 0.21 4.5E-06 47.6 10.4 84 243-341 319-403 (406)
83 cd03795 GT1_like_4 This family 95.0 0.13 2.8E-06 47.3 8.8 61 242-313 279-339 (357)
84 cd04962 GT1_like_5 This family 94.5 0.27 5.8E-06 45.6 9.6 61 240-312 282-342 (371)
85 cd03813 GT1_like_3 This family 94.4 0.27 5.9E-06 47.9 9.8 84 240-338 382-471 (475)
86 cd03799 GT1_amsK_like This is 94.3 0.17 3.6E-06 46.5 7.7 59 240-310 273-331 (355)
87 cd03786 GT1_UDP-GlcNAc_2-Epime 94.1 0.071 1.5E-06 49.6 4.7 85 210-313 258-344 (363)
88 PRK10307 putative glycosyl tra 94.0 0.56 1.2E-05 44.5 10.7 83 244-341 323-405 (412)
89 TIGR03449 mycothiol_MshA UDP-N 93.9 0.44 9.6E-06 45.0 9.9 61 242-314 316-376 (405)
90 cd03812 GT1_CapH_like This fam 93.9 0.12 2.5E-06 47.7 5.8 67 240-319 278-344 (358)
91 cd03816 GT1_ALG1_like This fam 93.7 0.35 7.5E-06 46.2 8.8 69 224-306 304-381 (415)
92 cd04949 GT1_gtfA_like This fam 93.5 0.33 7.2E-06 45.2 8.1 60 240-310 290-349 (372)
93 cd04951 GT1_WbdM_like This fam 93.4 0.5 1.1E-05 43.4 9.1 80 242-339 276-356 (360)
94 cd03809 GT1_mtfB_like This fam 93.3 0.2 4.4E-06 45.9 6.3 64 241-318 285-348 (365)
95 PRK09922 UDP-D-galactose:(gluc 93.2 0.43 9.3E-06 44.5 8.3 55 242-308 271-326 (359)
96 cd03805 GT1_ALG2_like This fam 92.3 0.53 1.2E-05 44.1 7.7 56 243-311 314-369 (392)
97 cd03804 GT1_wbaZ_like This fam 92.0 0.21 4.6E-06 46.1 4.6 80 224-315 251-336 (351)
98 COG3914 Spy Predicted O-linked 91.9 0.29 6.2E-06 47.6 5.3 45 234-280 510-560 (620)
99 TIGR02468 sucrsPsyn_pln sucros 91.7 1.4 3E-05 46.7 10.3 71 234-316 573-647 (1050)
100 cd03819 GT1_WavL_like This fam 91.4 0.98 2.1E-05 41.4 8.3 58 242-311 278-336 (355)
101 TIGR02918 accessory Sec system 91.3 0.89 1.9E-05 44.6 8.2 59 241-306 405-467 (500)
102 cd04955 GT1_like_6 This family 91.1 0.86 1.9E-05 41.9 7.6 79 243-340 283-361 (363)
103 KOG4626 O-linked N-acetylgluco 90.5 0.89 1.9E-05 44.8 7.0 41 240-280 846-887 (966)
104 PRK10017 colanic acid biosynth 90.1 3 6.6E-05 40.0 10.4 86 242-341 336-422 (426)
105 cd03796 GT1_PIG-A_like This fa 89.9 2.3 5E-05 40.2 9.5 51 243-307 284-334 (398)
106 PRK15179 Vi polysaccharide bio 89.8 1.3 2.9E-05 45.1 8.1 74 234-317 593-674 (694)
107 PF13692 Glyco_trans_1_4: Glyc 89.7 0.23 4.9E-06 38.9 2.1 51 242-306 85-135 (135)
108 PHA01630 putative group 1 glyc 89.1 3.1 6.7E-05 38.5 9.4 105 224-341 199-328 (331)
109 PHA01633 putative glycosyl tra 89.1 1.2 2.5E-05 41.3 6.5 56 242-305 237-306 (335)
110 TIGR02470 sucr_synth sucrose s 89.0 3.2 7E-05 42.8 10.1 59 242-312 657-719 (784)
111 cd03802 GT1_AviGT4_like This f 87.6 2.4 5.2E-05 38.5 7.7 51 242-306 258-308 (335)
112 PLN00142 sucrose synthase 87.3 5 0.00011 41.6 10.2 67 234-312 668-742 (815)
113 PRK01021 lpxB lipid-A-disaccha 87.3 4.3 9.4E-05 40.4 9.4 93 234-329 490-594 (608)
114 PRK15490 Vi polysaccharide bio 85.8 5.1 0.00011 39.7 9.0 43 234-280 474-520 (578)
115 TIGR02095 glgA glycogen/starch 85.8 2.8 6.1E-05 40.7 7.5 51 243-305 380-436 (473)
116 PLN02275 transferase, transfer 84.5 1.9 4.2E-05 40.4 5.5 49 242-304 323-371 (371)
117 PF02350 Epimerase_2: UDP-N-ac 83.8 1.4 3.1E-05 41.0 4.2 77 224-315 248-327 (346)
118 cd04950 GT1_like_1 Glycosyltra 83.7 6 0.00013 37.1 8.4 48 243-306 293-340 (373)
119 PRK14098 glycogen synthase; Pr 83.0 3.4 7.4E-05 40.4 6.7 54 243-304 396-449 (489)
120 TIGR02400 trehalose_OtsA alpha 82.8 10 0.00022 36.8 9.7 100 223-342 344-455 (456)
121 COG0763 LpxB Lipid A disacchar 82.1 9.4 0.0002 35.7 8.7 108 234-342 266-380 (381)
122 cd03791 GT1_Glycogen_synthase_ 80.2 4.9 0.00011 38.9 6.7 55 243-305 385-441 (476)
123 PLN02949 transferase, transfer 80.1 7.7 0.00017 37.7 7.9 55 243-310 369-427 (463)
124 PRK00654 glgA glycogen synthas 79.0 6.3 0.00014 38.2 7.0 64 234-305 358-427 (466)
125 PLN02846 digalactosyldiacylgly 78.4 6.5 0.00014 38.1 6.7 58 234-306 302-363 (462)
126 PLN02501 digalactosyldiacylgly 77.1 8.4 0.00018 39.2 7.1 61 234-309 620-684 (794)
127 COG0381 WecB UDP-N-acetylgluco 75.7 5.9 0.00013 37.1 5.3 117 182-319 236-354 (383)
128 TIGR03713 acc_sec_asp1 accesso 75.0 5.7 0.00012 39.2 5.4 58 234-308 430-490 (519)
129 cd03806 GT1_ALG11_like This fa 74.4 8.8 0.00019 36.7 6.5 51 243-307 339-393 (419)
130 COG0438 RfaG Glycosyltransfera 74.2 29 0.00062 30.6 9.6 62 241-314 288-350 (381)
131 PF06258 Mito_fiss_Elm1: Mitoc 73.8 47 0.001 30.4 10.7 48 234-281 231-281 (311)
132 PRK10125 putative glycosyl tra 73.0 18 0.00039 34.5 8.2 54 234-300 308-365 (405)
133 PLN02316 synthase/transferase 72.5 21 0.00044 38.3 8.9 95 234-338 921-1028(1036)
134 cd03802 GT1_AviGT4_like This f 72.2 7.3 0.00016 35.2 5.2 78 11-90 1-115 (335)
135 COG4370 Uncharacterized protei 70.7 21 0.00045 32.4 7.3 62 246-315 324-388 (412)
136 COG1797 CobB Cobyrinic acid a, 69.8 15 0.00032 35.0 6.5 24 18-41 9-32 (451)
137 TIGR00236 wecB UDP-N-acetylglu 69.6 4.8 0.0001 37.5 3.4 76 12-88 2-116 (365)
138 PF13579 Glyco_trans_4_4: Glyc 68.5 1.4 3E-05 34.9 -0.4 64 26-89 6-103 (160)
139 cd03788 GT1_TPS Trehalose-6-Ph 68.2 15 0.00032 35.7 6.5 98 224-341 350-459 (460)
140 cd02067 B12-binding B12 bindin 68.1 5.7 0.00012 30.4 3.0 30 12-41 1-30 (119)
141 TIGR02919 accessory Sec system 67.0 17 0.00036 35.1 6.5 71 235-319 352-425 (438)
142 PRK14099 glycogen synthase; Pr 66.8 20 0.00043 35.1 7.2 33 9-41 2-40 (485)
143 PRK02261 methylaspartate mutas 64.2 11 0.00024 30.0 4.0 33 9-41 2-34 (137)
144 COG1817 Uncharacterized protei 62.3 7.7 0.00017 35.2 3.0 72 20-93 9-115 (346)
145 PF12146 Hydrolase_4: Putative 62.0 8.6 0.00019 27.3 2.7 31 11-41 16-46 (79)
146 PLN02939 transferase, transfer 60.9 37 0.00081 36.0 8.0 34 8-41 479-518 (977)
147 KOG0853 Glycosyltransferase [C 59.9 6.4 0.00014 38.2 2.2 69 234-315 368-442 (495)
148 PRK04885 ppnK inorganic polyph 59.1 14 0.0003 33.0 4.1 51 234-306 37-93 (265)
149 TIGR03568 NeuC_NnaA UDP-N-acet 57.7 19 0.0004 33.8 5.0 71 223-310 270-342 (365)
150 COG2230 Cfa Cyclopropane fatty 57.0 14 0.0003 33.3 3.7 40 238-277 79-121 (283)
151 cd03816 GT1_ALG1_like This fam 55.5 13 0.00028 35.4 3.6 33 9-41 2-34 (415)
152 cd03109 DTBS Dethiobiotin synt 52.8 81 0.0018 24.7 7.2 67 14-92 3-78 (134)
153 smart00851 MGS MGS-like domain 52.8 15 0.00033 26.5 2.8 60 27-86 2-89 (90)
154 cd03793 GT1_Glycogen_synthase_ 52.8 74 0.0016 31.9 8.2 71 234-306 476-552 (590)
155 PRK02155 ppnK NAD(+)/NADH kina 52.6 20 0.00044 32.5 4.1 51 234-306 65-119 (291)
156 cd00532 MGS-like MGS-like doma 52.6 17 0.00037 27.6 3.2 65 23-87 10-104 (112)
157 PF05225 HTH_psq: helix-turn-h 52.6 23 0.00051 22.0 3.2 25 292-316 1-26 (45)
158 cd04962 GT1_like_5 This family 52.3 13 0.00028 34.2 3.0 31 11-41 1-32 (371)
159 PF06925 MGDG_synth: Monogalac 50.8 29 0.00063 28.4 4.6 36 56-91 85-125 (169)
160 PLN03063 alpha,alpha-trehalose 50.1 41 0.00088 35.2 6.4 83 240-341 386-475 (797)
161 PLN02859 glutamine-tRNA ligase 50.0 24 0.00053 36.4 4.6 65 265-340 104-177 (788)
162 PF02310 B12-binding: B12 bind 48.3 22 0.00048 27.0 3.3 31 11-41 1-31 (121)
163 cd01635 Glycosyltransferase_GT 48.1 11 0.00024 31.5 1.7 68 20-91 12-84 (229)
164 COG2894 MinD Septum formation 47.7 19 0.00042 31.2 2.9 30 12-41 3-34 (272)
165 cd03786 GT1_UDP-GlcNAc_2-Epime 47.0 19 0.00041 33.2 3.2 33 56-88 84-118 (363)
166 PRK14077 pnk inorganic polypho 47.0 28 0.0006 31.5 4.1 51 234-306 66-120 (287)
167 cd01424 MGS_CPS_II Methylglyox 46.5 22 0.00049 26.7 3.0 66 22-87 10-100 (110)
168 PF02951 GSH-S_N: Prokaryotic 46.4 22 0.00047 27.6 2.8 31 11-41 1-34 (119)
169 COG2185 Sbm Methylmalonyl-CoA 46.0 23 0.0005 28.3 3.0 33 9-41 11-43 (143)
170 TIGR00715 precor6x_red precorr 45.8 15 0.00034 32.5 2.2 72 12-89 2-99 (256)
171 PRK02649 ppnK inorganic polyph 45.5 29 0.00063 31.7 4.0 51 234-306 70-124 (305)
172 PRK12342 hypothetical protein; 45.3 21 0.00046 31.6 3.0 36 56-91 105-145 (254)
173 PF06722 DUF1205: Protein of u 44.6 14 0.00031 27.4 1.5 22 201-222 31-52 (97)
174 cd07037 TPP_PYR_MenD Pyrimidin 44.5 85 0.0018 25.6 6.3 26 234-259 62-93 (162)
175 PRK05749 3-deoxy-D-manno-octul 44.1 31 0.00067 32.8 4.2 77 13-89 52-154 (425)
176 PF07355 GRDB: Glycine/sarcosi 44.0 16 0.00034 33.8 2.0 70 20-90 30-119 (349)
177 PRK03359 putative electron tra 43.7 24 0.00051 31.4 3.1 36 56-91 108-148 (256)
178 PRK01911 ppnK inorganic polyph 43.0 32 0.00069 31.2 3.8 51 234-306 66-120 (292)
179 PLN02605 monogalactosyldiacylg 42.8 45 0.00098 31.2 5.1 26 14-39 3-29 (382)
180 PF04558 tRNA_synt_1c_R1: Glut 41.7 27 0.00058 28.7 2.9 30 265-305 102-131 (164)
181 cd07039 TPP_PYR_POX Pyrimidine 41.1 60 0.0013 26.5 4.9 18 242-259 79-96 (164)
182 COG3195 Uncharacterized protei 40.0 1.3E+02 0.0029 24.6 6.4 51 264-320 110-160 (176)
183 PRK04539 ppnK inorganic polyph 39.9 35 0.00075 31.0 3.6 51 234-306 70-124 (296)
184 PRK01185 ppnK inorganic polyph 38.7 41 0.00089 30.1 3.8 51 234-306 54-105 (271)
185 cd02070 corrinoid_protein_B12- 38.7 43 0.00093 28.4 3.8 33 9-41 81-113 (201)
186 PRK03501 ppnK inorganic polyph 38.5 46 0.001 29.7 4.1 52 234-306 41-97 (264)
187 PRK03372 ppnK inorganic polyph 38.1 40 0.00087 30.8 3.7 51 234-306 74-128 (306)
188 PRK03378 ppnK inorganic polyph 37.8 49 0.0011 30.0 4.2 51 234-306 65-119 (292)
189 PLN02929 NADH kinase 37.7 50 0.0011 30.1 4.2 63 234-306 66-137 (301)
190 cd04951 GT1_WbdM_like This fam 37.6 23 0.00051 32.2 2.2 29 13-41 2-32 (360)
191 cd01141 TroA_d Periplasmic bin 37.5 41 0.00088 27.8 3.5 35 56-90 65-100 (186)
192 cd07038 TPP_PYR_PDC_IPDC_like 37.2 1E+02 0.0022 25.1 5.7 19 242-260 75-93 (162)
193 COG3560 FMR2 Predicted oxidore 37.0 54 0.0012 27.2 3.9 102 202-319 5-126 (200)
194 PRK14501 putative bifunctional 37.0 40 0.00087 34.8 4.0 100 224-342 351-461 (726)
195 KOG0780 Signal recognition par 36.9 3.8E+02 0.0083 25.6 14.3 153 12-258 103-273 (483)
196 cd03794 GT1_wbuB_like This fam 36.8 25 0.00053 31.9 2.3 30 12-41 1-34 (394)
197 PF04464 Glyphos_transf: CDP-G 36.1 40 0.00087 31.4 3.5 97 234-338 271-368 (369)
198 cd07035 TPP_PYR_POX_like Pyrim 36.0 87 0.0019 24.9 5.1 19 242-260 75-93 (155)
199 COG0297 GlgA Glycogen synthase 35.0 1.6E+02 0.0034 28.9 7.4 72 240-324 381-458 (487)
200 TIGR03568 NeuC_NnaA UDP-N-acet 35.0 23 0.0005 33.2 1.7 34 56-89 89-124 (365)
201 PRK14075 pnk inorganic polypho 34.0 58 0.0013 28.9 4.0 51 234-306 43-94 (256)
202 PRK03708 ppnK inorganic polyph 34.0 47 0.001 29.8 3.5 51 234-306 59-112 (277)
203 PRK14076 pnk inorganic polypho 33.7 50 0.0011 33.1 3.9 51 234-306 350-404 (569)
204 PRK01231 ppnK inorganic polyph 32.8 60 0.0013 29.5 4.0 51 234-306 64-118 (295)
205 PLN02846 digalactosyldiacylgly 32.8 42 0.0009 32.7 3.1 34 8-41 2-40 (462)
206 PF13477 Glyco_trans_4_2: Glyc 32.4 31 0.00068 26.7 1.9 73 12-88 1-105 (139)
207 COG0108 RibB 3,4-dihydroxy-2-b 32.3 8.3 0.00018 32.6 -1.5 61 20-88 122-191 (203)
208 cd00453 FTBP_aldolase_II Fruct 32.2 2.6E+02 0.0056 26.0 7.9 78 201-304 187-287 (340)
209 PRK02231 ppnK inorganic polyph 32.2 42 0.00091 30.1 2.8 50 234-305 44-97 (272)
210 cd01425 RPS2 Ribosomal protein 32.1 64 0.0014 27.2 3.8 33 60-92 127-160 (193)
211 PRK13604 luxD acyl transferase 31.6 65 0.0014 29.4 4.0 33 9-41 35-67 (307)
212 cd02071 MM_CoA_mut_B12_BD meth 31.6 57 0.0012 25.1 3.2 30 12-41 1-30 (122)
213 PRK00654 glgA glycogen synthas 31.5 48 0.001 32.1 3.3 92 182-277 283-380 (466)
214 PRK05299 rpsB 30S ribosomal pr 31.4 29 0.00063 30.8 1.7 33 60-92 157-190 (258)
215 PF11740 KfrA_N: Plasmid repli 31.2 65 0.0014 24.5 3.5 45 291-342 1-45 (120)
216 TIGR02370 pyl_corrinoid methyl 30.9 73 0.0016 26.9 4.0 33 9-41 83-115 (197)
217 PF07429 Glyco_transf_56: 4-al 30.8 2.7E+02 0.0059 26.0 7.8 57 239-305 276-332 (360)
218 cd00763 Bacterial_PFK Phosphof 30.4 4.3E+02 0.0094 24.3 9.4 62 238-304 170-237 (317)
219 cd01423 MGS_CPS_I_III Methylgl 30.2 62 0.0013 24.5 3.2 64 23-86 11-105 (116)
220 PRK10353 3-methyl-adenine DNA 29.9 2.9E+02 0.0063 23.3 7.2 80 257-336 22-118 (187)
221 cd01635 Glycosyltransferase_GT 29.7 47 0.001 27.5 2.7 22 242-263 195-216 (229)
222 TIGR02193 heptsyl_trn_I lipopo 29.7 3.1E+02 0.0068 24.7 8.3 30 12-41 1-32 (319)
223 COG2910 Putative NADH-flavin r 29.5 44 0.00096 28.1 2.3 28 11-42 1-28 (211)
224 COG4088 Predicted nucleotide k 29.1 77 0.0017 27.4 3.6 84 12-95 3-113 (261)
225 PF13499 EF-hand_7: EF-hand do 29.1 60 0.0013 21.4 2.6 53 287-340 13-65 (66)
226 PRK10307 putative glycosyl tra 28.7 59 0.0013 30.7 3.4 31 11-41 1-35 (412)
227 TIGR01012 Sa_S2_E_A ribosomal 28.7 73 0.0016 27.0 3.5 33 60-92 108-141 (196)
228 TIGR02482 PFKA_ATP 6-phosphofr 28.3 93 0.002 28.4 4.4 40 224-263 76-126 (301)
229 PLN02935 Bifunctional NADH kin 28.2 77 0.0017 31.1 4.0 51 234-306 264-318 (508)
230 COG0329 DapA Dihydrodipicolina 28.1 2.8E+02 0.006 25.2 7.5 49 201-251 31-91 (299)
231 KOG3125 Thymidine kinase [Nucl 27.9 2.3E+02 0.005 24.1 6.2 48 234-281 72-137 (234)
232 cd03805 GT1_ALG2_like This fam 27.8 64 0.0014 29.9 3.5 31 11-41 1-33 (392)
233 PF03401 TctC: Tripartite tric 27.6 38 0.00081 30.3 1.7 30 288-317 214-243 (274)
234 TIGR01011 rpsB_bact ribosomal 27.5 81 0.0018 27.4 3.7 33 60-92 155-188 (225)
235 cd02069 methionine_synthase_B1 27.2 90 0.0019 26.8 3.9 33 9-41 87-119 (213)
236 COG0052 RpsB Ribosomal protein 27.1 77 0.0017 27.9 3.4 32 61-92 157-189 (252)
237 cd03821 GT1_Bme6_like This fam 26.6 61 0.0013 29.1 3.0 22 20-41 13-34 (375)
238 PTZ00254 40S ribosomal protein 26.3 85 0.0018 27.7 3.6 34 60-93 118-152 (249)
239 PHA02754 hypothetical protein; 26.2 90 0.002 20.6 2.8 24 300-323 7-30 (67)
240 PRK04020 rps2P 30S ribosomal p 25.8 82 0.0018 26.9 3.3 34 60-93 114-148 (204)
241 cd00764 Eukaryotic_PFK Phospho 25.5 98 0.0021 32.2 4.4 47 217-263 456-519 (762)
242 PF12174 RST: RCD1-SRO-TAF4 (R 25.4 88 0.0019 21.6 2.9 30 288-317 39-68 (70)
243 PF10083 DUF2321: Uncharacteri 24.9 1.7E+02 0.0036 23.8 4.7 57 257-323 77-134 (158)
244 cd05022 S-100A13 S-100A13: S-1 24.7 1.5E+02 0.0032 21.5 4.1 53 287-342 22-74 (89)
245 TIGR02095 glgA glycogen/starch 24.5 76 0.0016 30.7 3.4 92 182-277 292-389 (473)
246 PF05693 Glycogen_syn: Glycoge 23.9 1.1E+02 0.0024 30.8 4.2 32 65-97 149-180 (633)
247 cd03801 GT1_YqgM_like This fam 23.5 73 0.0016 28.3 2.9 70 21-91 14-117 (374)
248 COG1698 Uncharacterized protei 23.1 2.6E+02 0.0057 20.4 4.9 32 295-326 17-48 (93)
249 PF02441 Flavoprotein: Flavopr 23.0 72 0.0016 24.7 2.4 29 12-41 2-30 (129)
250 cd00764 Eukaryotic_PFK Phospho 22.8 5.9E+02 0.013 26.7 9.3 67 238-304 198-275 (762)
251 cd01965 Nitrogenase_MoFe_beta_ 22.8 95 0.0021 29.8 3.6 71 10-89 299-396 (428)
252 cd08806 CARD_CARD14_CARMA2 Cas 22.8 2.2E+02 0.0049 20.5 4.5 37 300-342 36-75 (86)
253 TIGR02015 BchY chlorophyllide 22.7 78 0.0017 30.4 3.0 69 12-89 287-380 (422)
254 TIGR02113 coaC_strep phosphopa 22.2 2.7E+02 0.0059 23.1 5.8 60 244-303 104-176 (177)
255 PF13439 Glyco_transf_4: Glyco 22.1 50 0.0011 26.1 1.4 22 20-41 11-32 (177)
256 cd01147 HemV-2 Metal binding p 22.1 1E+02 0.0023 26.8 3.5 34 56-90 70-106 (262)
257 cd00763 Bacterial_PFK Phosphof 21.8 1.4E+02 0.0031 27.4 4.3 40 224-263 77-126 (317)
258 PF01116 F_bP_aldolase: Fructo 21.3 1.9E+02 0.004 26.2 4.9 78 201-305 161-251 (287)
259 PF10727 Rossmann-like: Rossma 21.1 1.1E+02 0.0024 23.9 3.0 36 1-41 1-36 (127)
260 TIGR02398 gluc_glyc_Psyn gluco 21.1 6.3E+02 0.014 24.8 8.8 83 240-342 392-481 (487)
261 COG2327 WcaK Polysaccharide py 20.9 5.9E+02 0.013 24.2 8.2 63 242-312 294-357 (385)
262 PF07319 DnaI_N: Primosomal pr 20.9 72 0.0016 23.4 1.8 18 294-311 19-36 (94)
263 TIGR01918 various_sel_PB selen 20.9 77 0.0017 30.2 2.4 68 21-89 27-114 (431)
264 cd03818 GT1_ExpC_like This fam 20.8 82 0.0018 29.5 2.7 33 57-90 84-117 (396)
265 PF05728 UPF0227: Uncharacteri 20.7 2.4E+02 0.0053 23.6 5.2 71 25-95 15-94 (187)
266 COG1422 Predicted membrane pro 20.6 4.3E+02 0.0092 22.5 6.5 39 297-337 61-103 (201)
267 PF00318 Ribosomal_S2: Ribosom 20.6 1.3E+02 0.0028 25.8 3.6 33 60-92 143-176 (211)
268 PRK08535 translation initiatio 20.6 1.5E+02 0.0033 27.1 4.3 64 28-92 161-232 (310)
269 cd01981 Pchlide_reductase_B Pc 20.6 90 0.002 29.9 3.0 71 11-90 302-396 (430)
270 PRK02910 light-independent pro 20.5 92 0.002 30.8 3.1 30 56-89 358-387 (519)
271 PRK14099 glycogen synthase; Pr 20.4 1.1E+02 0.0025 29.8 3.7 71 234-312 371-453 (485)
272 CHL00076 chlB photochlorophyll 20.4 90 0.0019 30.8 2.9 30 56-89 370-399 (513)
273 PRK06276 acetolactate synthase 20.3 2.6E+02 0.0056 28.1 6.2 26 234-259 65-96 (586)
274 cd00861 ProRS_anticodon_short 20.2 1.2E+02 0.0026 21.5 3.0 31 11-41 2-34 (94)
275 PRK11380 hypothetical protein; 20.1 3E+02 0.0065 25.5 5.9 78 214-307 104-195 (353)
276 TIGR01278 DPOR_BchB light-inde 20.1 90 0.0019 30.8 2.9 31 56-90 360-390 (511)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.8e-59 Score=442.97 Aligned_cols=320 Identities=24% Similarity=0.379 Sum_probs=256.3
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch---------H-----hhhc-------------------
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH---------V-----TSSL------------------- 50 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~---------i-----~~~~------------------- 50 (343)
++.||+++|+|++||++||++||+.|+.||+.| |+ |+ | ...+
T Consensus 6 ~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~~~~~~i~~~~ip~glp~~~~~~~~~~~~~~~~~~ 85 (451)
T PLN02410 6 ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPESLPESDFKNLGPIEFLHKLNK 85 (451)
T ss_pred CCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccccCCCCeEEEeCCCCCCcccccccCHHHHHHHHHH
Confidence 577999999999999999999999999999998 22 21 1 0000
Q ss_pred ---ccCCC-cCC------CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc-------C--CC
Q 043530 51 ---SLLPS-LSS------PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV-------G--SK 111 (343)
Q Consensus 51 ---~~l~~-l~~------~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-------~--~~ 111 (343)
+.+++ +++ .+++|||+|. +.+|+..+|+++|||++.|++++++.+..+.+++.+... . ..
T Consensus 86 ~~~~~~~~~L~~l~~~~~~p~~cVI~D~-f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (451)
T PLN02410 86 ECQVSFKDCLGQLVLQQGNEIACVVYDE-FMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQ 164 (451)
T ss_pred HhHHHHHHHHHHHHhccCCCcEEEEECC-cchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccC
Confidence 01111 222 1569999999 778999999999999999999999988877665433211 1 01
Q ss_pred CcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCC
Q 043530 112 DAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLP 191 (343)
Q Consensus 112 ~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~ 191 (343)
....+|++++++..+ +|.............+... ...++++++++|||++||+.+++++++. . .+++++|||++
T Consensus 165 ~~~~iPg~~~~~~~d-lp~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~---~-~~~v~~vGpl~ 238 (451)
T PLN02410 165 QNELVPEFHPLRCKD-FPVSHWASLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQ---L-QIPVYPIGPLH 238 (451)
T ss_pred ccccCCCCCCCChHH-CcchhcCCcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhc---c-CCCEEEecccc
Confidence 223588988888888 8864432222233333322 2356789999999999999999999764 1 36899999997
Q ss_pred CCCC------C-CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-------------------------------
Q 043530 192 LYGF------E-KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------------- 233 (343)
Q Consensus 192 ~~~~------~-~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------------- 233 (343)
.... + +.++.+|||+++++|||||||||...++.+|+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f 318 (451)
T PLN02410 239 LVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEF 318 (451)
T ss_pred cccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhH
Confidence 5321 1 1235889999999999999999999999999888875
Q ss_pred -------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCCCC
Q 043530 234 -------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGG 287 (343)
Q Consensus 234 -------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~ 287 (343)
++|||||||||++||+++|||||+||+++||+.||+++++. |+|+.+ .
T Consensus 319 ~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~------~ 392 (451)
T PLN02410 319 SKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQV------E 392 (451)
T ss_pred HHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEe------C
Confidence 67999999999999999999999999999999999999887 999999 3
Q ss_pred cCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 288 EAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
..+++++|+++|+++|.++ +||+||++|++.+++|+.+||||++++++|+++++
T Consensus 393 -~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 393 -GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred -CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999754 79999999999999999999999999999999986
No 2
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.9e-59 Score=442.82 Aligned_cols=328 Identities=24% Similarity=0.450 Sum_probs=259.3
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCC--CCC----Cc-ch-----------------H-----h------------
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHH--VKS----PE-NH-----------------V-----T------------ 47 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rG--h~V----~~-~~-----------------i-----~------------ 47 (343)
.+.|++++|+|++||++||++||+.|+.+| ..| |+ ++ + .
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 81 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGTQ 81 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCcccccc
Confidence 357999999999999999999999999998 666 22 11 1 0
Q ss_pred -------hhcccC----CC-----cCCC----C-CCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccc
Q 043530 48 -------SSLSLL----PS-----LSSP----P-LSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHT 106 (343)
Q Consensus 48 -------~~~~~l----~~-----l~~~----~-~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 106 (343)
.+...+ ++ +++. + ++|||+|. +++|+..+|+++|||++.|++++++.+..+.+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~-~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~ 160 (468)
T PLN02207 82 SVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADF-FCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRH 160 (468)
T ss_pred CHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECC-cchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcc
Confidence 000011 11 1211 2 38999999 7789999999999999999999998888877765432
Q ss_pred ccC-C------CCcccCCCC-CCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCcc
Q 043530 107 LVG-S------KDAIEMPTL-EPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVI 178 (343)
Q Consensus 107 ~~~-~------~~~~~~p~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 178 (343)
... . ...+.+|++ ++++..+ +|.++..... +..+.+......+++++++|||++||+++++.++..
T Consensus 161 ~~~~~~~~~~~~~~~~vPgl~~~l~~~d-lp~~~~~~~~--~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~--- 234 (468)
T PLN02207 161 SKDTSVFVRNSEEMLSIPGFVNPVPANV-LPSALFVEDG--YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDE--- 234 (468)
T ss_pred ccccccCcCCCCCeEECCCCCCCCChHH-CcchhcCCcc--HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhc---
Confidence 211 0 122458998 5799898 8876542221 333445455677899999999999999999888542
Q ss_pred CCCCcEEEeccCCCCCCC--C-------CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH----------------
Q 043530 179 EGLPLVIPIGLLPLYGFE--K-------SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD---------------- 233 (343)
Q Consensus 179 ~~~p~v~~VGpl~~~~~~--~-------~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---------------- 233 (343)
+..|+++.|||++..... + .++.+|||+++++|||||||||...++.+++++++.
T Consensus 235 ~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~ 314 (468)
T PLN02207 235 QNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTE 314 (468)
T ss_pred cCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 336889999999863211 1 245899999988999999999999999999999876
Q ss_pred -------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-hc
Q 043530 234 -------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER-TG 275 (343)
Q Consensus 234 -------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~-~G 275 (343)
++|||||||||++||+++|||||+||+++||+.||+++++ .|
T Consensus 315 ~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 394 (468)
T PLN02207 315 EVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELK 394 (468)
T ss_pred CccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhC
Confidence 7899999999999999999999999999999999999877 69
Q ss_pred ceeeeeccC-CCCcCcccHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 276 MGIWVQSWG-WGGEAIMKGEQIAENISEMMG--NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 276 ~G~~l~~~~-~~~~~~~t~~~l~~ai~~vl~--~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+|+++..+. ....+.+++++|.++|+++|+ +++||+||++|++++++|+.+||||++++++|++++++
T Consensus 395 vGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 395 LAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred ceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 999883210 001235799999999999997 78999999999999999999999999999999999874
No 3
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.1e-59 Score=445.04 Aligned_cols=331 Identities=24% Similarity=0.363 Sum_probs=262.4
Q ss_pred CCCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch--Hh------------------------------
Q 043530 5 SELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH--VT------------------------------ 47 (343)
Q Consensus 5 ~~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~--i~------------------------------ 47 (343)
.++.+++||+++|+|++||++||++||+.|+.+|+.| |+ |+ +.
T Consensus 4 ~~~~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~ 83 (477)
T PLN02863 4 LNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVK 83 (477)
T ss_pred cccCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChh
Confidence 4667789999999999999999999999999999998 32 21 10
Q ss_pred -----------hhcccCCC-----cCC--CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccC
Q 043530 48 -----------SSLSLLPS-----LSS--PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVG 109 (343)
Q Consensus 48 -----------~~~~~l~~-----l~~--~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (343)
.+...+.. +++ .+++|||+|. +.+|+..+|+++|||++.|++++++.++.+.+++......
T Consensus 84 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~-f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~ 162 (477)
T PLN02863 84 DLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDM-FLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTK 162 (477)
T ss_pred hcchhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcC-chHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccc
Confidence 00001111 222 2579999999 8889999999999999999999999999887765321110
Q ss_pred ----C-CCcc---cCCCCCCCCCCCCCCCcccc--cchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccC
Q 043530 110 ----S-KDAI---EMPTLEPIPKPWILPPLFQD--MNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIE 179 (343)
Q Consensus 110 ----~-~~~~---~~p~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 179 (343)
. .+.+ .+|++++++..+ +|.+++. ..+...+.+.+.......++++++|||++||+.++++++.. .
T Consensus 163 ~~~~~~~~~~~~~~iPg~~~~~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~---~ 238 (477)
T PLN02863 163 INPDDQNEILSFSKIPNCPKYPWWQ-ISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKE---L 238 (477)
T ss_pred ccccccccccccCCCCCCCCcChHh-CchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhh---c
Confidence 0 1112 378888888888 8865542 22233344444444456788999999999999999998764 1
Q ss_pred CCCcEEEeccCCCCCC--------------CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------
Q 043530 180 GLPLVIPIGLLPLYGF--------------EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------ 233 (343)
Q Consensus 180 ~~p~v~~VGpl~~~~~--------------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------ 233 (343)
+.+++++|||++.... .+.++.+|||.+++++||||||||+..++.+++++++.
T Consensus 239 ~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~ 318 (477)
T PLN02863 239 GHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWC 318 (477)
T ss_pred CCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEE
Confidence 1268999999974321 01235899999988999999999999888888888876
Q ss_pred --------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHH
Q 043530 234 --------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINAD 269 (343)
Q Consensus 234 --------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~ 269 (343)
++|||||||||++||+++|||||+||+++||+.||+
T Consensus 319 ~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~ 398 (477)
T PLN02863 319 VKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNAS 398 (477)
T ss_pred ECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHH
Confidence 799999999999999999999999999999999999
Q ss_pred HHHH-hcceeeeeccCCCCcCcccHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 270 VVER-TGMGIWVQSWGWGGEAIMKGEQIAENISEMM-GNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 270 ~v~~-~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl-~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
++++ .|+|+++.+. ....++++++.++|+++| ++++||+||++|++++++|+.+||||++++++|+++++.
T Consensus 399 ~v~~~~gvG~~~~~~---~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~ 471 (477)
T PLN02863 399 LLVDELKVAVRVCEG---ADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVE 471 (477)
T ss_pred HHHHhhceeEEeccC---CCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHH
Confidence 9875 5999999431 224579999999999999 689999999999999999999999999999999999863
No 4
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=9.9e-59 Score=441.62 Aligned_cols=327 Identities=23% Similarity=0.342 Sum_probs=257.9
Q ss_pred CCCCceEEEEcCCCccChHHHHHHHHH--HHHCCCCC----Cc-ch--H-------------------------------
Q 043530 7 LKPSRLFALLSSSGMGHLTPFLRLAAL--LTAHHVKS----PE-NH--V------------------------------- 46 (343)
Q Consensus 7 ~~~~~~il~~~~p~~GH~~p~l~La~~--L~~rGh~V----~~-~~--i------------------------------- 46 (343)
+.++.||+++|+|++||++|+++||++ |++||++| |+ ++ +
T Consensus 5 ~~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~~~~~~~~ 84 (456)
T PLN02210 5 EGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFSDGLPKDDPRAPETLL 84 (456)
T ss_pred CCCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECCCCCCCCcccCHHHHH
Confidence 445789999999999999999999999 56999999 22 11 1
Q ss_pred ----hhhcccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc-CC----CCcccC
Q 043530 47 ----TSSLSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV-GS----KDAIEM 116 (343)
Q Consensus 47 ----~~~~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~ 116 (343)
..+.+.+++ +++.+|||||+|. +.+|+..+|+++|||++.|+++++..+..+.+++..... .. .+.+.+
T Consensus 85 ~~~~~~~~~~l~~~l~~~~~~~vI~D~-~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T PLN02210 85 KSLNKVGAKNLSKIIEEKRYSCIISSP-FTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVEL 163 (456)
T ss_pred HHHHHhhhHHHHHHHhcCCCcEEEECC-cchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeeeC
Confidence 001111222 4455899999999 777999999999999999999999888877655321110 11 122458
Q ss_pred CCCCCCCCCCCCCCcccccchHHHHHH-HHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCCC--
Q 043530 117 PTLEPIPKPWILPPLFQDMNNFLKTSF-IENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLY-- 193 (343)
Q Consensus 117 p~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~-- 193 (343)
|++++++..+ +|.++..........+ .+.......++++++|||++||+.+++.+++. +++++|||++..
T Consensus 164 Pgl~~~~~~d-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~------~~v~~VGPl~~~~~ 236 (456)
T PLN02210 164 PALPLLEVRD-LPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL------KPVIPIGPLVSPFL 236 (456)
T ss_pred CCCCCCChhh-CChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc------CCEEEEcccCchhh
Confidence 8888888888 8875544332222222 23333456789999999999999999988752 579999999741
Q ss_pred ---CC-------------CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------
Q 043530 194 ---GF-------------EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------ 233 (343)
Q Consensus 194 ---~~-------------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------ 233 (343)
.. ++.+|.+|||.++++|||||||||....+.+++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~ 316 (456)
T PLN02210 237 LGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQV 316 (456)
T ss_pred cCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhh
Confidence 11 01234789999988999999999998888888888876
Q ss_pred ---------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-hcceeeeeccCC
Q 043530 234 ---------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER-TGMGIWVQSWGW 285 (343)
Q Consensus 234 ---------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~ 285 (343)
++|||||||||++||+++|||||+||+++||+.||+++++ .|+|++++...
T Consensus 317 ~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~- 395 (456)
T PLN02210 317 LQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA- 395 (456)
T ss_pred HHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc-
Confidence 5999999999999999999999999999999999999998 79999994210
Q ss_pred CCcCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 286 GGEAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 286 ~~~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
..+.+++++|+++|+++|.++ ++|+||++|++.+++|+.+||||++++++|+++++.
T Consensus 396 -~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 396 -VDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455 (456)
T ss_pred -cCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 124689999999999999765 599999999999999999999999999999999863
No 5
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-58 Score=438.34 Aligned_cols=323 Identities=23% Similarity=0.295 Sum_probs=257.3
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch----------H----------h---------------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH----------V----------T--------------- 47 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~----------i----------~--------------- 47 (343)
.++.||+++|+|++||++||++||+.|+.+|+.| |+ ++ | .
T Consensus 3 ~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~ 82 (449)
T PLN02173 3 KMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATISDGYDQGGFSSAGSVPEYLQN 82 (449)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCCCCCEEEEEcCCCCCCcccccccCHHHHHHH
Confidence 4567999999999999999999999999999998 22 11 1 0
Q ss_pred ---hhcccCCC-cCCC----CC-CEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCC
Q 043530 48 ---SSLSLLPS-LSSP----PL-SAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPT 118 (343)
Q Consensus 48 ---~~~~~l~~-l~~~----~~-D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 118 (343)
.+.+.+++ ++++ +| +|||+|. +.+|+..+|+++|||++.|++++++.+..+.+. .. ..+ ...+.+|+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~-f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~-~~-~~~-~~~~~~pg 158 (449)
T PLN02173 83 FKTFGSKTVADIIRKHQSTDNPITCIVYDS-FMPWALDLAREFGLAAAPFFTQSCAVNYINYLS-YI-NNG-SLTLPIKD 158 (449)
T ss_pred HHHhhhHHHHHHHHHhhccCCCceEEEECC-cchhHHHHHHHhCCCEEEEechHHHHHHHHHhH-Hh-ccC-CccCCCCC
Confidence 00011111 3321 44 9999999 888999999999999999999988877655432 21 111 12345889
Q ss_pred CCCCCCCCCCCCcccc--cchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCCC---
Q 043530 119 LEPIPKPWILPPLFQD--MNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLY--- 193 (343)
Q Consensus 119 ~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~--- 193 (343)
+|+++..+ +|.++.. ..+...+.+.+......+++++++|||++||+.++++++.. ++++.|||++..
T Consensus 159 ~p~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~------~~v~~VGPl~~~~~~ 231 (449)
T PLN02173 159 LPLLELQD-LPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV------CPVLTIGPTVPSMYL 231 (449)
T ss_pred CCCCChhh-CChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc------CCeeEEcccCchhhc
Confidence 98888888 8876653 22233444555566677899999999999999999988643 479999999732
Q ss_pred -----CC----------C-CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------
Q 043530 194 -----GF----------E-KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------ 233 (343)
Q Consensus 194 -----~~----------~-~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------ 233 (343)
.. + +.+|.+||+.++++|||||||||+..++.+++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~ 311 (449)
T PLN02173 232 DQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRASEESKLPPGFL 311 (449)
T ss_pred cccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEeccchhcccchHH
Confidence 00 1 1236899999999999999999999999999988865
Q ss_pred -------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCCCC
Q 043530 234 -------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGG 287 (343)
Q Consensus 234 -------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~ 287 (343)
++|||||||||++||+++|||||+||+++||+.||+++++. |+|+.+.... .
T Consensus 312 ~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~--~ 389 (449)
T PLN02173 312 ETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEK--E 389 (449)
T ss_pred HhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecc--c
Confidence 79999999999999999999999999999999999999987 9998884310 1
Q ss_pred cCcccHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 288 EAIMKGEQIAENISEMMGN---ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~---~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
...+++|+|+++|+++|.+ +++|+||++|++++++|+.+||||++++++|+++++.
T Consensus 390 ~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~~ 448 (449)
T PLN02173 390 SGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQI 448 (449)
T ss_pred CCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence 1357999999999999975 5799999999999999999999999999999999863
No 6
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2e-58 Score=439.02 Aligned_cols=325 Identities=23% Similarity=0.329 Sum_probs=256.5
Q ss_pred CCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch------------H---------h-----------hh
Q 043530 7 LKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH------------V---------T-----------SS 49 (343)
Q Consensus 7 ~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~------------i---------~-----------~~ 49 (343)
..++.||+++|+|++||++||++||+.|+++|++| |+ ++ + . .+
T Consensus 3 ~~~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~g~~~~~~~~~~~l~~a 82 (448)
T PLN02562 3 VTQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQDDDPPRDFFSIENS 82 (448)
T ss_pred CCCCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCCCCCCCccccHHHHHHH
Confidence 34567999999999999999999999999999999 22 11 1 0 00
Q ss_pred cc-cCCC-----cCCC----CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCC---------
Q 043530 50 LS-LLPS-----LSSP----PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGS--------- 110 (343)
Q Consensus 50 ~~-~l~~-----l~~~----~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~--------- 110 (343)
.. .+++ ++++ +++|||+|. +.+|+..+|+++|||++.|++++++.+..+.+++.....+.
T Consensus 83 ~~~~~~~~l~~ll~~l~~~~pv~cvI~D~-~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (448)
T PLN02562 83 MENTMPPQLERLLHKLDEDGEVACMVVDL-LASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQ 161 (448)
T ss_pred HHHhchHHHHHHHHHhcCCCCcEEEEECC-ccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccccccccc
Confidence 00 1222 2222 347999999 88899999999999999999999988887666553222110
Q ss_pred CCcc-cCCCCCCCCCCCCCCCccccc--chHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEe
Q 043530 111 KDAI-EMPTLEPIPKPWILPPLFQDM--NNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPI 187 (343)
Q Consensus 111 ~~~~-~~p~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~V 187 (343)
.+++ .+|++|+++..+ +|.++... .....+.+.+......+++++++|||++||+.+++.++....++..|+++.|
T Consensus 162 ~~~~~~~Pg~~~l~~~d-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~i 240 (448)
T PLN02562 162 LEKICVLPEQPLLSTED-LPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQI 240 (448)
T ss_pred ccccccCCCCCCCChhh-CcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEe
Confidence 0122 478888888888 88765422 2233555666666677889999999999999888866532111335789999
Q ss_pred ccCCCCCC-----C-----CCCcchhhhcCCCCceeEEeccCCc-cCCHHHHHHHHH-----------------------
Q 043530 188 GLLPLYGF-----E-----KSQPLAWLDDQATGSVVDVSFGSRT-AMSREQLRELGD----------------------- 233 (343)
Q Consensus 188 Gpl~~~~~-----~-----~~~~~~wl~~~~~~~vVyvs~GS~~-~~~~~~~~~l~~----------------------- 233 (343)
||++.... . +.++.+||+.++++|||||||||+. .++.+++++++.
T Consensus 241 Gpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~ 320 (448)
T PLN02562 241 GPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVWREGLPP 320 (448)
T ss_pred cCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCH
Confidence 99986432 1 1234699999988999999999986 678888888765
Q ss_pred ---------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCC
Q 043530 234 ---------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGW 285 (343)
Q Consensus 234 ---------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~ 285 (343)
++|||||||||++||+++|||||+||+++||+.||+++++. |+|+.+
T Consensus 321 ~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----- 395 (448)
T PLN02562 321 GYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----- 395 (448)
T ss_pred HHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe-----
Confidence 78999999999999999999999999999999999999875 999888
Q ss_pred CCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 286 GGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 286 ~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
. .+++++|.++|+++|+|++||+||++++++++++ ++||||++++++|+++++
T Consensus 396 -~--~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 396 -S--GFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred -C--CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 2 4799999999999999999999999999999887 778999999999999885
No 7
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.5e-58 Score=437.17 Aligned_cols=330 Identities=27% Similarity=0.440 Sum_probs=257.4
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHH-HCCCCC----Cc-ch------------H-----h--h--h-----------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLT-AHHVKS----PE-NH------------V-----T--S--S----------- 49 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~-~rGh~V----~~-~~------------i-----~--~--~----------- 49 (343)
..++||+++|+|++||++||++||+.|+ ++|++| |+ |+ | . . .
T Consensus 3 ~~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~~~~~~~ 82 (481)
T PLN02992 3 ITKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPSAHVVTK 82 (481)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCCccHHHH
Confidence 3578999999999999999999999998 799998 22 21 1 0 0 0
Q ss_pred ----c----ccCCC-cCCC--CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCC------CC
Q 043530 50 ----L----SLLPS-LSSP--PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGS------KD 112 (343)
Q Consensus 50 ----~----~~l~~-l~~~--~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~------~~ 112 (343)
. +.+++ ++++ +|+|||+|. +.+|+..+|+++|||++.|++++++.++.+.+.+.+..... ..
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~-f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02992 83 IGVIMREAVPTLRSKIAEMHQKPTALIVDL-FGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRK 161 (481)
T ss_pred HHHHHHHhHHHHHHHHHhcCCCCeEEEECC-cchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCC
Confidence 0 11112 3332 689999999 77899999999999999999999988877666654322111 12
Q ss_pred cccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccC--CCCcEEEeccC
Q 043530 113 AIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIE--GLPLVIPIGLL 190 (343)
Q Consensus 113 ~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~--~~p~v~~VGpl 190 (343)
++.+|++++++..+ +|..+.+.....+..+.+......+++++++|||++||+.+++++++..... ..++++.|||+
T Consensus 162 ~~~iPg~~~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl 240 (481)
T PLN02992 162 PLAMPGCEPVRFED-TLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPL 240 (481)
T ss_pred CcccCCCCccCHHH-hhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCc
Confidence 34589998888888 8864444333344555555566778999999999999999999886420000 02579999999
Q ss_pred CCCCC---CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH----------------------------------
Q 043530 191 PLYGF---EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD---------------------------------- 233 (343)
Q Consensus 191 ~~~~~---~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---------------------------------- 233 (343)
+.... ++.++.+|||.++++|||||||||+..++.+|+++++.
T Consensus 241 ~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~ 320 (481)
T PLN02992 241 CRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETR 320 (481)
T ss_pred cCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccc
Confidence 75421 12346899999988999999999998777766655421
Q ss_pred -------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHH-Hhc
Q 043530 234 -------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVE-RTG 275 (343)
Q Consensus 234 -------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~-~~G 275 (343)
++|||||||||++||+++|||||+||+++||+.||++++ +.|
T Consensus 321 ~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g 400 (481)
T PLN02992 321 DNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELG 400 (481)
T ss_pred cchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhC
Confidence 679999999999999999999999999999999999995 779
Q ss_pred ceeeeeccCCCCcCcccHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHhC
Q 043530 276 MGIWVQSWGWGGEAIMKGEQIAENISEMMGN---ELLRIQEMRIREEARTAIE--QGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 276 ~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~---~~~r~~a~~l~~~~~~a~~--~gg~~~~~~~~~~~~~~~ 343 (343)
+|++++. ..+.+++++|+++|+++|.+ +++|++|+++++++++|+. +||||++++++|++++++
T Consensus 401 ~gv~~~~----~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 401 IAVRSDD----PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred eeEEecC----CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 9999942 12468999999999999974 5899999999999999994 599999999999999863
No 8
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.3e-57 Score=434.14 Aligned_cols=326 Identities=22% Similarity=0.391 Sum_probs=259.7
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch--Hhh------------------------hcc------
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH--VTS------------------------SLS------ 51 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~--i~~------------------------~~~------ 51 (343)
.++||+++|+|++||++||++||+.|+.+|..| |+ ++ +.. .++
T Consensus 6 ~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~ 85 (480)
T PLN02555 6 SLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRR 85 (480)
T ss_pred CCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCcccc
Confidence 467999999999999999999999999999888 22 11 100 000
Q ss_pred ------------cCC----C-cCC----CC-CCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccc---
Q 043530 52 ------------LLP----S-LSS----PP-LSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHT--- 106 (343)
Q Consensus 52 ------------~l~----~-l~~----~~-~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~--- 106 (343)
.++ + +++ .+ ++|||+|. ++.|+..+|+++|||+++|++++++.+..+.+++...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~-~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~ 164 (480)
T PLN02555 86 QDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNP-FIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPF 164 (480)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECC-cchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCc
Confidence 000 0 111 13 48999999 7789999999999999999999999988877764321
Q ss_pred ccC--CCCcccCCCCCCCCCCCCCCCcccc--cchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCC
Q 043530 107 LVG--SKDAIEMPTLEPIPKPWILPPLFQD--MNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLP 182 (343)
Q Consensus 107 ~~~--~~~~~~~p~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p 182 (343)
... ...++.+|++|+++..+ +|.++.. ..+...+.+.+......+++++++|||++||+.+++.++.. .|
T Consensus 165 ~~~~~~~~~~~iPglp~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~-----~~ 238 (480)
T PLN02555 165 PTETEPEIDVQLPCMPLLKYDE-IPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKL-----CP 238 (480)
T ss_pred ccccCCCceeecCCCCCcCHhh-CcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhC-----CC
Confidence 111 11235689999899999 9876642 22334455555566677899999999999999999988754 34
Q ss_pred cEEEeccCCCCC----C-------C-CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------
Q 043530 183 LVIPIGLLPLYG----F-------E-KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------- 233 (343)
Q Consensus 183 ~v~~VGpl~~~~----~-------~-~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------- 233 (343)
++.|||+.... . + +.++.+||+.+++++||||||||+..++.+++++++.
T Consensus 239 -v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~ 317 (480)
T PLN02555 239 -IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPH 317 (480)
T ss_pred -EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCc
Confidence 99999996421 0 1 1245899999988999999999998888888877765
Q ss_pred ---------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh
Q 043530 234 ---------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT 274 (343)
Q Consensus 234 ---------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~ 274 (343)
++|||||||||++||+++|||||+||+++||+.||+++++.
T Consensus 318 ~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~ 397 (480)
T PLN02555 318 KDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDV 397 (480)
T ss_pred ccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHH
Confidence 78999999999999999999999999999999999999887
Q ss_pred -cceeeeeccCCCCcCcccHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 275 -GMGIWVQSWGWGGEAIMKGEQIAENISEMMGN---ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 275 -G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~---~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
|+|+++.+.. ...+.+++++|.++|+++|.+ +++|+||++|++++++|+.+||||++++++||++++.
T Consensus 398 ~gvGv~l~~~~-~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 398 FKTGVRLCRGE-AENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred hCceEEccCCc-cccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 9999994210 013468999999999999964 5799999999999999999999999999999999863
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=5.3e-58 Score=439.23 Aligned_cols=332 Identities=29% Similarity=0.515 Sum_probs=257.2
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCC----CCC----Cc---c----hHh--------------------------
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHH----VKS----PE---N----HVT-------------------------- 47 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rG----h~V----~~---~----~i~-------------------------- 47 (343)
.+.||+++|+|++||++||++||+.|+.|| +.| |+ + .+.
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~ 81 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPTD 81 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCCc
Confidence 467999999999999999999999999997 455 21 1 010
Q ss_pred ---------hhcccCC----C-cCCC--CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc--C
Q 043530 48 ---------SSLSLLP----S-LSSP--PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV--G 109 (343)
Q Consensus 48 ---------~~~~~l~----~-l~~~--~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~ 109 (343)
.....++ + ++++ +++|||+|. +..|+..+|+++|||++.|++++++.++.+.+++..... +
T Consensus 82 ~e~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~-f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~ 160 (480)
T PLN00164 82 AAGVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDF-FCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAV 160 (480)
T ss_pred cccHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECC-cchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccC
Confidence 0000111 1 3333 469999999 778999999999999999999999999888877653222 1
Q ss_pred C----CCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCC--CCc
Q 043530 110 S----KDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEG--LPL 183 (343)
Q Consensus 110 ~----~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~--~p~ 183 (343)
. .+++.+|++++++..+ +|.++....+..+..+........+++++++|||++||+.++++++.....++ .|+
T Consensus 161 ~~~~~~~~~~iPGlp~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~ 239 (480)
T PLN00164 161 EFEEMEGAVDVPGLPPVPASS-LPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPT 239 (480)
T ss_pred cccccCcceecCCCCCCChHH-CCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCc
Confidence 0 1234589998898889 88765433322234444445556789999999999999999999875310011 268
Q ss_pred EEEeccCCCCCC------CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------
Q 043530 184 VIPIGLLPLYGF------EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------ 233 (343)
Q Consensus 184 v~~VGpl~~~~~------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------ 233 (343)
++.|||++.... .+.++.+|||.++++|||||||||+..++.+|+++++.
T Consensus 240 v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~ 319 (480)
T PLN00164 240 VYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHP 319 (480)
T ss_pred eEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccc
Confidence 999999974211 11245899999999999999999998777777766654
Q ss_pred ---------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-
Q 043530 234 ---------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER- 273 (343)
Q Consensus 234 ---------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~- 273 (343)
++|||||||||++||+++|||||+||+++||+.||+++++
T Consensus 320 ~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~ 399 (480)
T PLN00164 320 TDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVAD 399 (480)
T ss_pred cccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHH
Confidence 5899999999999999999999999999999999998865
Q ss_pred hcceeeeeccCCCCcCcccHHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 274 TGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN-----ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 274 ~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~-----~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
.|+|+.++.+. .+.+.+++++|+++|+++|.+ +++|+||++|++++++|+++||||++++++|+++++.
T Consensus 400 ~gvG~~~~~~~-~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~ 473 (480)
T PLN00164 400 MGVAVAMKVDR-KRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRH 473 (480)
T ss_pred hCeEEEecccc-ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 69999984210 012357999999999999964 4589999999999999999999999999999999863
No 10
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=3.1e-57 Score=428.45 Aligned_cols=329 Identities=26% Similarity=0.431 Sum_probs=254.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHC-CCCC----Cc-ch--H------hh----------hcc--------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAH-HVKS----PE-NH--V------TS----------SLS-------------- 51 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~r-Gh~V----~~-~~--i------~~----------~~~-------------- 51 (343)
+.|++++|+|++||++||++||+.|+++ |..| |+ ++ + .. .++
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~~~ 82 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDATI 82 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCccH
Confidence 4599999999999999999999999977 8777 22 11 0 00 000
Q ss_pred ---------cCCC-----cCCC--CCCEEEECCCCccchHHHHHHcCCC-cEEEecccHHHHHHHHhhhccccc--CC--
Q 043530 52 ---------LLPS-----LSSP--PLSAPVTDMTLTASVLPISRAINVP-NYIFFTSSAKMLTLFVSFHTHTLV--GS-- 110 (343)
Q Consensus 52 ---------~l~~-----l~~~--~~D~vi~D~~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~~~~~~~--~~-- 110 (343)
.++. ++++ +++|||+|. +..|+..+|+++||| .+.|++++++.+..+.+++..... ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~-f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~ 161 (470)
T PLN03015 83 FTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDF-FGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYV 161 (470)
T ss_pred HHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcC-CcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccC
Confidence 0111 2222 579999999 778999999999999 588888888887777666543211 11
Q ss_pred --CCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCc--cCCCCcEEE
Q 043530 111 --KDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKV--IEGLPLVIP 186 (343)
Q Consensus 111 --~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~--~~~~p~v~~ 186 (343)
.+++.+|++|+++..+ +|..+.+.....+..+.+......+++++++|||++||+..++.+++... .-..+++++
T Consensus 162 ~~~~~~~vPg~p~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~ 240 (470)
T PLN03015 162 DIKEPLKIPGCKPVGPKE-LMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYP 240 (470)
T ss_pred CCCCeeeCCCCCCCChHH-CCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEE
Confidence 1235689999899999 88655443322233344555567889999999999999999999875300 000256999
Q ss_pred eccCCCCCC--C-CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------------
Q 043530 187 IGLLPLYGF--E-KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------------ 233 (343)
Q Consensus 187 VGpl~~~~~--~-~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------------ 233 (343)
|||++.... + +.++.+|||.++++|||||||||+..++.+|+++++.
T Consensus 241 VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~ 320 (470)
T PLN03015 241 IGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQV 320 (470)
T ss_pred ecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccch
Confidence 999974321 1 2246999999999999999999998888887777653
Q ss_pred ----------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHH-Hhccee
Q 043530 234 ----------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVE-RTGMGI 278 (343)
Q Consensus 234 ----------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~-~~G~G~ 278 (343)
++|||||||||++||+++|||||+||+++||+.||++++ +.|+|+
T Consensus 321 ~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~ 400 (470)
T PLN03015 321 SASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAV 400 (470)
T ss_pred hhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeE
Confidence 889999999999999999999999999999999999985 559999
Q ss_pred eeeccCCCCcCcccHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 279 WVQSWGWGGEAIMKGEQIAENISEMMG-----NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 279 ~l~~~~~~~~~~~t~~~l~~ai~~vl~-----~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
++... ...+.+++++|+++|+++|. ++++|+||++|++++++|+++||||++++++|+++++
T Consensus 401 ~~~~~--~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 401 RTSEL--PSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred Eeccc--ccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 99310 01347999999999999994 4689999999999999999999999999999999874
No 11
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=4.4e-57 Score=427.90 Aligned_cols=317 Identities=24% Similarity=0.394 Sum_probs=249.2
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHH-CCCCC----Cc-ch-------------H-----h--------h---------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTA-HHVKS----PE-NH-------------V-----T--------S--------- 48 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~-rGh~V----~~-~~-------------i-----~--------~--------- 48 (343)
+.||+++|+|++||++||++||+.|++ +|+.| |+ +. + . .
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~dglp~g~~~~~~~~~~~~ 82 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFSDGFDDGVISNTDDVQNRL 82 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcCCCCCCccccccccHHHHH
Confidence 469999999999999999999999996 79988 22 10 1 0 0
Q ss_pred ------hcccCCC-cCC-----CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccC
Q 043530 49 ------SLSLLPS-LSS-----PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEM 116 (343)
Q Consensus 49 ------~~~~l~~-l~~-----~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (343)
+.+.+++ +++ .+++|||+|. +.+|+..+|+++|||++.|++++++.++.+.+++.. ....+.+
T Consensus 83 ~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~-~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~----~~~~~~i 157 (455)
T PLN02152 83 VNFERNGDKALSDFIEANLNGDSPVTCLIYTI-LPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG----NNSVFEF 157 (455)
T ss_pred HHHHHhccHHHHHHHHHhhccCCCceEEEECC-ccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc----CCCeeec
Confidence 0011111 222 2359999999 778999999999999999999999998887665421 1123568
Q ss_pred CCCCCCCCCCCCCCccccc--chHHHHHHHHHHhhcc--CcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCC
Q 043530 117 PTLEPIPKPWILPPLFQDM--NNFLKTSFIENAKKMT--ESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPL 192 (343)
Q Consensus 117 p~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~ 192 (343)
|++|+++..+ +|.++... .+...+.+.+..+... .++++++|||++||+.++++++. .+++.|||+..
T Consensus 158 Pglp~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-------~~v~~VGPL~~ 229 (455)
T PLN02152 158 PNLPSLEIRD-LPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-------IEMVAVGPLLP 229 (455)
T ss_pred CCCCCCchHH-CchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-------CCEEEEcccCc
Confidence 9998888888 98866422 2233444444444332 35799999999999999998753 36999999975
Q ss_pred CC----C---------C-CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-------------------------
Q 043530 193 YG----F---------E-KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------- 233 (343)
Q Consensus 193 ~~----~---------~-~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------- 233 (343)
.. . + +.++.+|||.++++|||||||||+..++.+|+++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~ 309 (455)
T PLN02152 230 AEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEG 309 (455)
T ss_pred cccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccc
Confidence 21 0 1 1245899999988999999999998887777666654
Q ss_pred -------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-c
Q 043530 234 -------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-G 275 (343)
Q Consensus 234 -------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G 275 (343)
++|||||||||++||+++|||||++|+++||+.||+++++. |
T Consensus 310 ~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~ 389 (455)
T PLN02152 310 EEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWK 389 (455)
T ss_pred ccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhC
Confidence 78999999999999999999999999999999999999985 6
Q ss_pred ceeeeeccCCCCcCcccHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 276 MGIWVQSWGWGGEAIMKGEQIAENISEMMGNE--LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 276 ~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~--~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+|+.+..+ ..+.+|+|+|+++|+++|+++ +||+||++|+++++++..+||||++++++||++++
T Consensus 390 ~G~~~~~~---~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 390 TGVRVREN---SEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred ceEEeecC---cCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhC
Confidence 77666321 234679999999999999754 58999999999999999999999999999999874
No 12
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.1e-57 Score=434.47 Aligned_cols=328 Identities=30% Similarity=0.523 Sum_probs=253.5
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCC--CCC----Cc-ch--------------------H----------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHH--VKS----PE-NH--------------------V---------------- 46 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rG--h~V----~~-~~--------------------i---------------- 46 (343)
|.||+++|+|++||++||++||+.|+.+| ..| |+ ++ |
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 81 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTEDP 81 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcccch
Confidence 67999999999999999999999999999 554 22 21 1
Q ss_pred ------hhhcccCCC-cC----C-----CC-CCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc-
Q 043530 47 ------TSSLSLLPS-LS----S-----PP-LSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV- 108 (343)
Q Consensus 47 ------~~~~~~l~~-l~----~-----~~-~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 108 (343)
..+.+.+++ ++ + .+ ++|||+|. ++.|+..+|+++|||++.|++++++.++.+.+++.....
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~-f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~ 160 (481)
T PLN02554 82 TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDM-FCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEK 160 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECC-cchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhcccc
Confidence 000001111 11 1 12 37999999 778999999999999999999999999988877653221
Q ss_pred -----C--CC-CcccCCCCC-CCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccC
Q 043530 109 -----G--SK-DAIEMPTLE-PIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIE 179 (343)
Q Consensus 109 -----~--~~-~~~~~p~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 179 (343)
+ +. .++.+|+++ +++..+ +|..+... .....+.+......+++++++||+++||..+.+.+.+.. +
T Consensus 161 ~~~~~~~~~~~~~v~iPgl~~pl~~~d-lp~~~~~~--~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~--~ 235 (481)
T PLN02554 161 KYDVSELEDSEVELDVPSLTRPYPVKC-LPSVLLSK--EWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSS--G 235 (481)
T ss_pred ccCccccCCCCceeECCCCCCCCCHHH-CCCcccCH--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcc--c
Confidence 0 01 224588885 788888 88655332 234445555566778999999999999999988887420 1
Q ss_pred CCCcEEEeccCC-CCCC-----CC--CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------
Q 043530 180 GLPLVIPIGLLP-LYGF-----EK--SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------ 233 (343)
Q Consensus 180 ~~p~v~~VGpl~-~~~~-----~~--~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------ 233 (343)
..|++++|||++ .... .+ .++.+||+.+++++||||||||+..++.+++++++.
T Consensus 236 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~ 315 (481)
T PLN02554 236 DLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASP 315 (481)
T ss_pred CCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcc
Confidence 247899999994 2221 11 245999999988999999999997666555544432
Q ss_pred ----------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHH
Q 043530 234 ----------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKIN 267 (343)
Q Consensus 234 ----------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~n 267 (343)
++|||||||||++||+++|||||+||+++||+.|
T Consensus 316 ~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~N 395 (481)
T PLN02554 316 NIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFN 395 (481)
T ss_pred cccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhh
Confidence 6799999999999999999999999999999999
Q ss_pred HHH-HHHhcceeeeeccCC-----CCcCcccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 268 ADV-VERTGMGIWVQSWGW-----GGEAIMKGEQIAENISEMMG-NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 268 a~~-v~~~G~G~~l~~~~~-----~~~~~~t~~~l~~ai~~vl~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
|++ +++.|+|+.++.+.+ +....+++++|.++|+++|+ |++||+||+++++++++|+.+||||++++++||++
T Consensus 396 a~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~ 475 (481)
T PLN02554 396 AFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQD 475 (481)
T ss_pred HHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 955 677899999953100 01247899999999999996 89999999999999999999999999999999999
Q ss_pred HhC
Q 043530 341 WKN 343 (343)
Q Consensus 341 ~~~ 343 (343)
+++
T Consensus 476 ~~~ 478 (481)
T PLN02554 476 VTK 478 (481)
T ss_pred HHh
Confidence 874
No 13
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=3.1e-57 Score=428.47 Aligned_cols=315 Identities=25% Similarity=0.449 Sum_probs=249.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCC--CCC------Cc-ch----------------H-----h------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHH--VKS------PE-NH----------------V-----T------------ 47 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rG--h~V------~~-~~----------------i-----~------------ 47 (343)
+-||+++|+|++||++||++||+.|+++| +.| ++ +. | .
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 82 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSSTSR 82 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccccc
Confidence 34999999999999999999999999998 334 11 10 1 0
Q ss_pred ------------hhcccCCC-cCCC----CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc--
Q 043530 48 ------------SSLSLLPS-LSSP----PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV-- 108 (343)
Q Consensus 48 ------------~~~~~l~~-l~~~----~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-- 108 (343)
...+.+.+ ++++ +++|||+|. +.+|+..+|+++|||++.|++++++.++.+.+++.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~-~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 161 (451)
T PLN03004 83 HHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDF-FCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTP 161 (451)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECC-cchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccc
Confidence 00001111 3332 359999999 788999999999999999999999999888776542211
Q ss_pred C----CCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcE
Q 043530 109 G----SKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLV 184 (343)
Q Consensus 109 ~----~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v 184 (343)
. ...++.+|++|+++..+ +|.++....+..+..+.+......+++++++|||++||+.+++++++. ...+++
T Consensus 162 ~~~~~~~~~v~iPg~p~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~---~~~~~v 237 (451)
T PLN03004 162 GKNLKDIPTVHIPGVPPMKGSD-MPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEE---LCFRNI 237 (451)
T ss_pred ccccccCCeecCCCCCCCChHH-CchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhc---CCCCCE
Confidence 1 11224689999888888 897665443334455555556677889999999999999999998753 113589
Q ss_pred EEeccCCCCCC---C----CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------
Q 043530 185 IPIGLLPLYGF---E----KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------ 233 (343)
Q Consensus 185 ~~VGpl~~~~~---~----~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------ 233 (343)
+.|||++.... . +.+|.+|||.++++|||||||||+..++.+|+++++.
T Consensus 238 ~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~ 317 (451)
T PLN03004 238 YPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTEL 317 (451)
T ss_pred EEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccccc
Confidence 99999974321 1 1236899999999999999999998888888777764
Q ss_pred ------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-hcc
Q 043530 234 ------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER-TGM 276 (343)
Q Consensus 234 ------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~-~G~ 276 (343)
++|||||||||++||+++|||||+||+++||+.||+++++ .|+
T Consensus 318 ~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~ 397 (451)
T PLN03004 318 DLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKI 397 (451)
T ss_pred chhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCc
Confidence 7799999999999999999999999999999999999986 599
Q ss_pred eeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 043530 277 GIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKK 332 (343)
Q Consensus 277 G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~ 332 (343)
|++++.. +.+.+++++|+++|+++|+|++||+||+++++++++|+.+||||++
T Consensus 398 g~~l~~~---~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 398 AISMNES---ETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred eEEecCC---cCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999421 1236899999999999999999999999999999999999999875
No 14
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-56 Score=425.15 Aligned_cols=313 Identities=18% Similarity=0.224 Sum_probs=241.7
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCCC----c---chH-----------------h--hhc------------
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKSP----E---NHV-----------------T--SSL------------ 50 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~----~---~~i-----------------~--~~~------------ 50 (343)
.++||+++|+|++||++|+++||+.|++|||+|| + ..+ . ..+
T Consensus 3 ~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~~ 82 (442)
T PLN02208 3 PKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIPI 82 (442)
T ss_pred CCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchhH
Confidence 4789999999999999999999999999999992 1 101 0 000
Q ss_pred --------------ccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCccc
Q 043530 51 --------------SLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIE 115 (343)
Q Consensus 51 --------------~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (343)
+.+++ ++++++||||+|. + .|+..+|+++|||++.|++++++.+. +.+++. +.. +..
T Consensus 83 ~l~~~~~~~~~~~~~~l~~~L~~~~~~cVV~D~-~-~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~-~~~ 154 (442)
T PLN02208 83 SMDNLLSEALDLTRDQVEAAVRALRPDLIFFDF-A-QWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKL-GVP 154 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEECC-c-HhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----ccc-CCC
Confidence 01111 3445899999995 5 69999999999999999999998654 444332 111 123
Q ss_pred CCCCCC----CCCCCCCCCcccccchHHHHHHHHH-HhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccC
Q 043530 116 MPTLEP----IPKPWILPPLFQDMNNFLKTSFIEN-AKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLL 190 (343)
Q Consensus 116 ~p~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl 190 (343)
+|++|. ++..+ +|.+ ......++.+.+. .....+++++++|||++||+.+++++++. ..|++++|||+
T Consensus 155 ~pglp~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~----~~~~v~~vGpl 227 (442)
T PLN02208 155 PPGYPSSKVLFREND-AHAL--ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQ----YHKKVLLTGPM 227 (442)
T ss_pred CCCCCCcccccCHHH-cCcc--cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhh----cCCCEEEEeec
Confidence 577764 44556 6643 1222223333332 24566899999999999999999998753 34799999999
Q ss_pred CCCCC--C--CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH---------------------------------
Q 043530 191 PLYGF--E--KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD--------------------------------- 233 (343)
Q Consensus 191 ~~~~~--~--~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--------------------------------- 233 (343)
+...+ . +.++.+|||.++++|||||||||+..++.+|+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r 307 (442)
T PLN02208 228 FPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEER 307 (442)
T ss_pred ccCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHH
Confidence 86543 1 2345999999988999999999999988888877643
Q ss_pred -----------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-hcceeeeeccCCCCcC
Q 043530 234 -----------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER-TGMGIWVQSWGWGGEA 289 (343)
Q Consensus 234 -----------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~~~~~ 289 (343)
++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+++. +.+
T Consensus 308 ~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~---~~~ 384 (442)
T PLN02208 308 VKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE---KTG 384 (442)
T ss_pred HhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc---cCC
Confidence 7899999999999999999999999999999999999776 7999999421 113
Q ss_pred cccHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 290 IMKGEQIAENISEMMGNE-----LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 290 ~~t~~~l~~ai~~vl~~~-----~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
.+++++|+++|+++|+++ ++|+||+++++++ .++|||++++++|++++++
T Consensus 385 ~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~----~~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 385 WFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEIL----VSPGLLTGYVDKFVEELQE 439 (442)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----hcCCcHHHHHHHHHHHHHH
Confidence 499999999999999754 4999999999887 3478999999999999863
No 15
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.3e-57 Score=432.50 Aligned_cols=329 Identities=25% Similarity=0.442 Sum_probs=254.2
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCC---C----Cc---c-h--------------H-----h--------h--
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVK---S----PE---N-H--------------V-----T--------S-- 48 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~---V----~~---~-~--------------i-----~--------~-- 48 (343)
++.||+++|+|++||++||++||+.|+.+|.. | |+ + . | . .
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~~ 81 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMELF 81 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCcccccc
Confidence 46799999999999999999999999999843 2 11 1 0 1 0 0
Q ss_pred --------------hcccCCC-cCCC----------CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhh
Q 043530 49 --------------SLSLLPS-LSSP----------PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFH 103 (343)
Q Consensus 49 --------------~~~~l~~-l~~~----------~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 103 (343)
+.+.+++ ++++ +++|||+|. +++|+..+|+++|||++.|++++++.++.+.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~-f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~ 160 (475)
T PLN02167 82 VKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDF-FCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLP 160 (475)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECC-ccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHH
Confidence 0000111 1111 348999999 7789999999999999999999998888877665
Q ss_pred ccccc-C------C-CCcccCCCCC-CCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhc
Q 043530 104 THTLV-G------S-KDAIEMPTLE-PIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNG 174 (343)
Q Consensus 104 ~~~~~-~------~-~~~~~~p~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 174 (343)
..... . . .+++.+|+++ +++..+ +|..+.+.. .++.+.+......+++++++|||++||+.+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~d-lp~~~~~~~--~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~ 237 (475)
T PLN02167 161 ERHRKTASEFDLSSGEEELPIPGFVNSVPTKV-LPPGLFMKE--SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSR 237 (475)
T ss_pred HhccccccccccCCCCCeeECCCCCCCCChhh-CchhhhCcc--hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHh
Confidence 32211 0 0 1235589984 688888 876443321 133444555567789999999999999999999864
Q ss_pred CCccCCCCcEEEeccCCCCCC----C----C-CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------
Q 043530 175 GKVIEGLPLVIPIGLLPLYGF----E----K-SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------ 233 (343)
Q Consensus 175 ~~~~~~~p~v~~VGpl~~~~~----~----~-~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------ 233 (343)
.. ...|++++|||++.... . + .++.+||+.++++|||||||||+..++.+++++++.
T Consensus 238 ~~--~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~ 315 (475)
T PLN02167 238 LP--ENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWS 315 (475)
T ss_pred hc--ccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 20 01478999999986321 1 1 235899999988999999999998888888888765
Q ss_pred --------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHH
Q 043530 234 --------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINAD 269 (343)
Q Consensus 234 --------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~ 269 (343)
++|||||||||++||+++|||||+||+++||+.||+
T Consensus 316 ~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~ 395 (475)
T PLN02167 316 IRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAF 395 (475)
T ss_pred EecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHH
Confidence 689999999999999999999999999999999998
Q ss_pred H-HHHhcceeeeeccCC-CCcCcccHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 270 V-VERTGMGIWVQSWGW-GGEAIMKGEQIAENISEMMGN-ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 270 ~-v~~~G~G~~l~~~~~-~~~~~~t~~~l~~ai~~vl~~-~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+ +++.|+|+.+..... ++...+++++|+++|+++|.+ ++||+||+++++.+++|+.+||||++++++||++|++
T Consensus 396 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 396 TMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred HHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 7 567799999843100 012357999999999999975 4899999999999999999999999999999999874
No 16
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.5e-56 Score=425.97 Aligned_cols=327 Identities=25% Similarity=0.400 Sum_probs=249.6
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch----------------H-----h-----hhcc-----
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH----------------V-----T-----SSLS----- 51 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~----------------i-----~-----~~~~----- 51 (343)
.++.|++++|+|++||++||++||+.|+++|+.| |+ |+ | . ..++
T Consensus 6 ~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~ 85 (491)
T PLN02534 6 AKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCEN 85 (491)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccc
Confidence 3457999999999999999999999999999998 22 21 1 0 0000
Q ss_pred ------------------cCCC-----cCC--CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccc
Q 043530 52 ------------------LLPS-----LSS--PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHT 106 (343)
Q Consensus 52 ------------------~l~~-----l~~--~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 106 (343)
.+++ +++ .+++|||+|. +++|+..+|+++|||++.|++++++....+.++....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~-f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~ 164 (491)
T PLN02534 86 LDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDK-CLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHN 164 (491)
T ss_pred cccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECC-ccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhc
Confidence 0111 112 2579999999 8889999999999999999999998877654332111
Q ss_pred c----cCCCCcccCCCCCC---CCCCCCCCCcccccchHHHHHHHHHHh-hccCcCEEEEeCcccccchhHHhhhcCCcc
Q 043530 107 L----VGSKDAIEMPTLEP---IPKPWILPPLFQDMNNFLKTSFIENAK-KMTESDGILVNISKTIEGKTLAELNGGKVI 178 (343)
Q Consensus 107 ~----~~~~~~~~~p~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 178 (343)
. ..+..++.+|++|+ ++..+ +|.++.... ..+.+.+... ...+++++++|||++||+.++++++..
T Consensus 165 ~~~~~~~~~~~~~iPg~p~~~~l~~~d-lp~~~~~~~--~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~--- 238 (491)
T PLN02534 165 AHLSVSSDSEPFVVPGMPQSIEITRAQ-LPGAFVSLP--DLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKA--- 238 (491)
T ss_pred ccccCCCCCceeecCCCCccccccHHH-CChhhcCcc--cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhh---
Confidence 1 11123456788874 67777 776443211 1222222222 344678999999999999999998754
Q ss_pred CCCCcEEEeccCCCCCC--------------CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------
Q 043530 179 EGLPLVIPIGLLPLYGF--------------EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------- 233 (343)
Q Consensus 179 ~~~p~v~~VGpl~~~~~--------------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------- 233 (343)
..++++.|||++.... ++.+|.+|||.++++|||||||||...++++|+.+++.
T Consensus 239 -~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW 317 (491)
T PLN02534 239 -IKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIW 317 (491)
T ss_pred -cCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Confidence 1368999999974210 11236899999998999999999998888888887765
Q ss_pred ----------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHH
Q 043530 234 ----------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKIN 267 (343)
Q Consensus 234 ----------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~n 267 (343)
++|||||||||++||+++|||||+||+++||+.|
T Consensus 318 ~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~n 397 (491)
T PLN02534 318 VIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLN 397 (491)
T ss_pred EEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHH
Confidence 7899999999999999999999999999999999
Q ss_pred HHHHHHh-cceeeeec-----cCCCC--cCcccHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Q 043530 268 ADVVERT-GMGIWVQS-----WGWGG--EAIMKGEQIAENISEMMG-----NELLRIQEMRIREEARTAIEQGGSLKKRL 334 (343)
Q Consensus 268 a~~v~~~-G~G~~l~~-----~~~~~--~~~~t~~~l~~ai~~vl~-----~~~~r~~a~~l~~~~~~a~~~gg~~~~~~ 334 (343)
|+++++. |+|+++.. ++..+ ...+++|+|+++|+++|. ++++|+||++|++++++|+.+||||++++
T Consensus 398 a~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl 477 (491)
T PLN02534 398 EKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINL 477 (491)
T ss_pred HHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 9998765 99998831 11000 114899999999999995 36899999999999999999999999999
Q ss_pred HHHHHHHh
Q 043530 335 TELVEMWK 342 (343)
Q Consensus 335 ~~~~~~~~ 342 (343)
++||++++
T Consensus 478 ~~fv~~i~ 485 (491)
T PLN02534 478 SILIQDVL 485 (491)
T ss_pred HHHHHHHH
Confidence 99999986
No 17
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.5e-56 Score=427.38 Aligned_cols=330 Identities=26% Similarity=0.398 Sum_probs=259.3
Q ss_pred CCCCceEEEEcCCCccChHHHHHHHHHHHHC--CCCC----Cc-c--hHhh-----------------------------
Q 043530 7 LKPSRLFALLSSSGMGHLTPFLRLAALLTAH--HVKS----PE-N--HVTS----------------------------- 48 (343)
Q Consensus 7 ~~~~~~il~~~~p~~GH~~p~l~La~~L~~r--Gh~V----~~-~--~i~~----------------------------- 48 (343)
.+.+.||+++|+|++||++||++||++|++| ||+| |+ + .+..
T Consensus 7 ~~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~~~~~~~~~~~~ 86 (459)
T PLN02448 7 PTTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPSELVRAADFPGF 86 (459)
T ss_pred CCCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCCccccccCHHHH
Confidence 3458899999999999999999999999999 9999 22 1 1100
Q ss_pred -------hcccCCC-cCCC--CCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccC----C----
Q 043530 49 -------SLSLLPS-LSSP--PLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVG----S---- 110 (343)
Q Consensus 49 -------~~~~l~~-l~~~--~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~----~---- 110 (343)
+.+.+++ ++++ ++||||+|. ++.|+..+|+++|||++.|+++++..++.+.+++.....+ .
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~-~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (459)
T PLN02448 87 LEAVMTKMEAPFEQLLDRLEPPVTAIVADT-YLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSES 165 (459)
T ss_pred HHHHHHHhHHHHHHHHHhcCCCcEEEEECC-ccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccc
Confidence 0011111 3332 579999999 7889999999999999999999997777666654322110 0
Q ss_pred CCc-c-cCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEec
Q 043530 111 KDA-I-EMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIG 188 (343)
Q Consensus 111 ~~~-~-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VG 188 (343)
.++ + .+|++++++..+ +|.++........+.+.+......+++.+++|||++||+.+++++++. ..++++.||
T Consensus 166 ~~~~~~~iPg~~~l~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~----~~~~~~~iG 240 (459)
T PLN02448 166 GEERVDYIPGLSSTRLSD-LPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSK----FPFPVYPIG 240 (459)
T ss_pred cCCccccCCCCCCCChHH-CchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhh----cCCceEEec
Confidence 011 2 378888788888 886654433333445555555567788999999999999999998764 135799999
Q ss_pred cCCCCCC---------C-C--CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------
Q 043530 189 LLPLYGF---------E-K--SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------- 233 (343)
Q Consensus 189 pl~~~~~---------~-~--~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------- 233 (343)
|+..... . + .++..||+.+++++||||||||+...+.+++++++.
T Consensus 241 P~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~ 320 (459)
T PLN02448 241 PSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASRLKEI 320 (459)
T ss_pred CcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhHh
Confidence 9975311 0 1 134789999988999999999998888999888876
Q ss_pred ----------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCCCCcCc
Q 043530 234 ----------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGGEAI 290 (343)
Q Consensus 234 ----------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~~~~ 290 (343)
++|||||||||++||+++|||||+||+++||+.||+++++. |+|+.+..+. .+...
T Consensus 321 ~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~-~~~~~ 399 (459)
T PLN02448 321 CGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV-GEETL 399 (459)
T ss_pred ccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc-ccCCc
Confidence 67999999999999999999999999999999999999985 9998884310 01246
Q ss_pred ccHHHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 291 MKGEQIAENISEMMGN-----ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 291 ~t~~~l~~ai~~vl~~-----~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+|+++|+++|+++|.+ ++||+||++|++++++|+.+||||++++++|++++++
T Consensus 400 ~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 400 VGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 8999999999999975 3799999999999999999999999999999999874
No 18
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.5e-55 Score=422.48 Aligned_cols=328 Identities=24% Similarity=0.363 Sum_probs=247.2
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch--Hh--------------------------hhcc---
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH--VT--------------------------SSLS--- 51 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~--i~--------------------------~~~~--- 51 (343)
.++.||+++|+|++||++|+++||++|++||++| |+ +. +. ..++
T Consensus 3 ~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~ 82 (482)
T PLN03007 3 HEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGC 82 (482)
T ss_pred CCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCc
Confidence 3578999999999999999999999999999999 22 11 10 0000
Q ss_pred --------------------------cCCC-----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHH
Q 043530 52 --------------------------LLPS-----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFV 100 (343)
Q Consensus 52 --------------------------~l~~-----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 100 (343)
.+.+ +++.+|||||+|. +++|+..+|+++|||+++|++++++....+.
T Consensus 83 e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~-~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 83 ENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADM-FFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECC-cchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 0000 2233799999999 7779999999999999999999988776655
Q ss_pred hhhcccc--c--CCCCcccCCCCCC---CCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhh
Q 043530 101 SFHTHTL--V--GSKDAIEMPTLEP---IPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELN 173 (343)
Q Consensus 101 ~~~~~~~--~--~~~~~~~~p~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~ 173 (343)
.+..... . .....+.+|++|+ ++..+ ++.. +........+........+++++++|||++||+++.+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~ 238 (482)
T PLN03007 162 CIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQ-INDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYK 238 (482)
T ss_pred HHHhcccccccCCCCceeeCCCCCCccccCHHh-cCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHH
Confidence 3322110 0 1012244777762 33344 4431 2222233444444455778899999999999999888887
Q ss_pred cCCccCCCCcEEEeccCCCCCC--------------CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------
Q 043530 174 GGKVIEGLPLVIPIGLLPLYGF--------------EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------ 233 (343)
Q Consensus 174 ~~~~~~~~p~v~~VGpl~~~~~--------------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------ 233 (343)
+. ..+++++|||+..... .+.++.+||+.++++|||||||||+..++.+++.+++.
T Consensus 239 ~~----~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~ 314 (482)
T PLN03007 239 SF----VAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSG 314 (482)
T ss_pred hc----cCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCC
Confidence 54 1247999999864221 01235899999988999999999998888888777765
Q ss_pred --------------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcc
Q 043530 234 --------------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGD 263 (343)
Q Consensus 234 --------------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~D 263 (343)
++|||||||||++||+++|||||+||+++|
T Consensus 315 ~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~D 394 (482)
T PLN03007 315 QNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAE 394 (482)
T ss_pred CCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhh
Confidence 779999999999999999999999999999
Q ss_pred hhHHHHHHHHh-cceeeeeccCC--CCcCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 043530 264 QKINADVVERT-GMGIWVQSWGW--GGEAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTEL 337 (343)
Q Consensus 264 Q~~na~~v~~~-G~G~~l~~~~~--~~~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~ 337 (343)
|+.||+++++. ++|+.+..+.. .+...+++++|+++|+++|.++ +||+||++|++++++|+.+||||++++++|
T Consensus 395 Q~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~ 474 (482)
T PLN03007 395 QFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKF 474 (482)
T ss_pred hhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 99999998753 55555421000 0234689999999999999877 899999999999999999999999999999
Q ss_pred HHHHhC
Q 043530 338 VEMWKN 343 (343)
Q Consensus 338 ~~~~~~ 343 (343)
+++++.
T Consensus 475 v~~~~~ 480 (482)
T PLN03007 475 MEELNS 480 (482)
T ss_pred HHHHHh
Confidence 999863
No 19
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=9.2e-56 Score=420.20 Aligned_cols=324 Identities=23% Similarity=0.338 Sum_probs=247.4
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch-------------H-----h----hhcc---------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH-------------V-----T----SSLS--------- 51 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~-------------i-----~----~~~~--------- 51 (343)
..++||+++|+|++||++||++||+.|++||+.| |+ |+ | . ..++
T Consensus 4 ~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~ 83 (472)
T PLN02670 4 EEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDV 83 (472)
T ss_pred CCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCccccccc
Confidence 3467999999999999999999999999999998 22 21 1 0 0000
Q ss_pred -------------cCCC-----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCC---
Q 043530 52 -------------LLPS-----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGS--- 110 (343)
Q Consensus 52 -------------~l~~-----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~--- 110 (343)
.+++ +++.+++|||+|. +..|+..+|+++|||++.|++++++.++.+.+...+...+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~cvI~D~-f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~ 162 (472)
T PLN02670 84 PYTKQQLLKKAFDLLEPPLTTFLETSKPDWIIYDY-ASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRS 162 (472)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhCCCcEEEECC-cchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCC
Confidence 0111 2334789999999 78899999999999999999999988887654432221111
Q ss_pred -CCcc-cCCCCCC------CCCCCCCCCccccc--chHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCC
Q 043530 111 -KDAI-EMPTLEP------IPKPWILPPLFQDM--NNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEG 180 (343)
Q Consensus 111 -~~~~-~~p~~~~------~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 180 (343)
.+++ .+|+..| ++..+ +|.++... .......+.+......+++++++|||++||+.+++++++. .
T Consensus 163 ~~~~~~~~p~~~P~~~~~~~~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~----~ 237 (472)
T PLN02670 163 TAEDFTVVPPWVPFESNIVFRYHE-VTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDL----Y 237 (472)
T ss_pred ccccccCCCCcCCCCccccccHHH-hhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHh----h
Confidence 1122 2454322 33446 66554321 1122233334444566789999999999999999998753 1
Q ss_pred CCcEEEeccCCCC--C-CC-C-------CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH----------------
Q 043530 181 LPLVIPIGLLPLY--G-FE-K-------SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD---------------- 233 (343)
Q Consensus 181 ~p~v~~VGpl~~~--~-~~-~-------~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---------------- 233 (343)
.+++++|||+... . .. . .++.+|||.++++|||||||||+..++.+|+++++.
T Consensus 238 ~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~ 317 (472)
T PLN02670 238 RKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNE 317 (472)
T ss_pred CCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 2589999999753 1 11 1 135799999988999999999999999999999876
Q ss_pred -----------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHH
Q 043530 234 -----------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVE 272 (343)
Q Consensus 234 -----------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~ 272 (343)
++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 318 ~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~ 397 (472)
T PLN02670 318 PGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLH 397 (472)
T ss_pred cccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHH
Confidence 779999999999999999999999999999999999999
Q ss_pred HhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 273 RTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 273 ~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+.|+|+.+++.. ..+.+++++|+++|+++|.++ +||+||++|++++++. +...+++++|++++++
T Consensus 398 ~~g~Gv~l~~~~--~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 398 GKKLGLEVPRDE--RDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVHYLRE 465 (472)
T ss_pred HcCeeEEeeccc--cCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHHHHHH
Confidence 999999995310 124589999999999999765 8999999999999865 7789999999999863
No 20
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.2e-54 Score=409.57 Aligned_cols=316 Identities=18% Similarity=0.256 Sum_probs=243.4
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch--------------H-----h---------hh-----
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH--------------V-----T---------SS----- 49 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~--------------i-----~---------~~----- 49 (343)
+.++||+++|+|++||++||++||+.|+.+|+.| |+ |+ + . ..
T Consensus 3 ~~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~ 82 (453)
T PLN02764 3 GLKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIP 82 (453)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCC
Confidence 4579999999999999999999999999999998 22 21 1 0 00
Q ss_pred ----------cccCCC-----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcc
Q 043530 50 ----------LSLLPS-----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAI 114 (343)
Q Consensus 50 ----------~~~l~~-----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (343)
...++. +++.++||||+|. .+|+..+|+++|||++.|++++++.++.+.. +. +.. +.
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~l~~~~~~~iV~D~--~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~----~~~-~~ 154 (453)
T PLN02764 83 VTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFDF--AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG----GEL-GV 154 (453)
T ss_pred hhHHHHHHHHHHHhHHHHHHHHHhCCCCEEEECC--chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc----ccC-CC
Confidence 001112 3344789999995 4599999999999999999999988877643 21 111 12
Q ss_pred cCCCCCC----CCCCCCCCCccc-cc---chHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEE
Q 043530 115 EMPTLEP----IPKPWILPPLFQ-DM---NNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIP 186 (343)
Q Consensus 115 ~~p~~~~----~~~~~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~ 186 (343)
.+|++|. ++..+ ++.+.. .. .+.....+.+......+++++++|||++||+.+++++++. ..++++.
T Consensus 155 ~~pglp~~~v~l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~----~~~~v~~ 229 (453)
T PLN02764 155 PPPGYPSSKVLLRKQD-AYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKH----CRKKVLL 229 (453)
T ss_pred CCCCCCCCcccCcHhh-CcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhh----cCCcEEE
Confidence 2477762 55566 554321 11 1112233333335567889999999999999999998753 1257999
Q ss_pred eccCCCCCCC----CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------------
Q 043530 187 IGLLPLYGFE----KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------------- 233 (343)
Q Consensus 187 VGpl~~~~~~----~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------------- 233 (343)
|||++..... +.++.+|||.++++|||||||||...++.+|+.+++.
T Consensus 230 VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~ 309 (453)
T PLN02764 230 TGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEG 309 (453)
T ss_pred eccCccCccccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcc
Confidence 9999753311 2356999999999999999999999999999999886
Q ss_pred ---------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHH-hcceeeeeccCC
Q 043530 234 ---------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER-TGMGIWVQSWGW 285 (343)
Q Consensus 234 ---------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~-~G~G~~l~~~~~ 285 (343)
++|||||||||++||+++|||||+||+++||+.||+++++ .|+|+.+.+.
T Consensus 310 f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~-- 387 (453)
T PLN02764 310 FEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE-- 387 (453)
T ss_pred hHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--
Confidence 7799999999999999999999999999999999999975 6999988320
Q ss_pred CCcCcccHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 286 GGEAIMKGEQIAENISEMMGNE-----LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 286 ~~~~~~t~~~l~~ai~~vl~~~-----~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+.+.+++++|.++|+++|+++ ++|++|+++++++ .+||||++++++|++++++
T Consensus 388 -~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~----~~~GSS~~~l~~lv~~~~~ 445 (453)
T PLN02764 388 -ETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETL----ASPGLLTGYVDNFIESLQD 445 (453)
T ss_pred -cCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHH
Confidence 113689999999999999753 3888888888887 4579999999999999874
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-54 Score=411.07 Aligned_cols=313 Identities=18% Similarity=0.262 Sum_probs=237.1
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc-ch------------H-----h----h-------------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE-NH------------V-----T----S------------- 48 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~-~~------------i-----~----~------------- 48 (343)
.+++||+++|+|++||++||++||+.|+++|++| |+ ++ + . .
T Consensus 2 ~~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~ 81 (446)
T PLN00414 2 GSKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLP 81 (446)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccch
Confidence 3578999999999999999999999999999999 22 11 1 0 0
Q ss_pred ---------hcccC----CC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcc
Q 043530 49 ---------SLSLL----PS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAI 114 (343)
Q Consensus 49 ---------~~~~l----~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (343)
+.+.+ ++ +++.+|||||+|. + +|+..+|+++|||++.|++++++.++.+.+... . . ..
T Consensus 82 ~~~~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~-~-~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~---~--~-~~ 153 (446)
T PLN00414 82 NSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDF-V-HWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA---E--L-GF 153 (446)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC-c-hhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh---h--c-CC
Confidence 00011 11 3344799999995 4 599999999999999999999988887665211 0 0 12
Q ss_pred cCCCCCC----CCCCC-CCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEecc
Q 043530 115 EMPTLEP----IPKPW-ILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGL 189 (343)
Q Consensus 115 ~~p~~~~----~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGp 189 (343)
.+|++|. ++..+ .++.++. . ....+.+..+...+++++++|||++||+.++++++.. ..+++++|||
T Consensus 154 ~~pg~p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~----~~~~v~~VGP 225 (446)
T PLN00414 154 PPPDYPLSKVALRGHDANVCSLFA-N---SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQ----CQRKVLLTGP 225 (446)
T ss_pred CCCCCCCCcCcCchhhcccchhhc-c---cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHh----cCCCeEEEcc
Confidence 2466653 22222 0122121 1 1233334445567799999999999999999998763 1257999999
Q ss_pred CCCCCCC------CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------------
Q 043530 190 LPLYGFE------KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------------ 233 (343)
Q Consensus 190 l~~~~~~------~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------------ 233 (343)
+...... +.++.+|||.++++|||||||||...++.+|+.+++.
T Consensus 226 l~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f 305 (446)
T PLN00414 226 MLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGF 305 (446)
T ss_pred cCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhH
Confidence 9743211 1235899999999999999999999999999999886
Q ss_pred --------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHH-HhcceeeeeccCCC
Q 043530 234 --------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVE-RTGMGIWVQSWGWG 286 (343)
Q Consensus 234 --------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~-~~G~G~~l~~~~~~ 286 (343)
++|||||||||++||+++|||||+||+++||+.||++++ +.|+|+.+++.
T Consensus 306 ~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~--- 382 (446)
T PLN00414 306 EERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE--- 382 (446)
T ss_pred HHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc---
Confidence 889999999999999999999999999999999999996 56999999431
Q ss_pred CcCcccHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 287 GEAIMKGEQIAENISEMMGNE-----LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 287 ~~~~~t~~~l~~ai~~vl~~~-----~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+.+.+++++|+++++++|.++ ++|++|+++++.+ .++||+| ..+++|++++++
T Consensus 383 ~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~---~~~gg~s-s~l~~~v~~~~~ 440 (446)
T PLN00414 383 DSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETL---VSPGLLS-GYADKFVEALEN 440 (446)
T ss_pred cCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH---HcCCCcH-HHHHHHHHHHHH
Confidence 123689999999999999753 4999999999986 4556633 448999999863
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1e-43 Score=346.28 Aligned_cols=293 Identities=22% Similarity=0.288 Sum_probs=173.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCCCc---------c-----h-----H--------------------------
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKSPE---------N-----H-----V-------------------------- 46 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V~~---------~-----~-----i-------------------------- 46 (343)
||+++|. +.||+.++..|+++|++|||+||- + . +
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSSSLNPSKPSNIRFETYPDPYPEEEFEEIFPEFISKFFSESSF 80 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHHT------S-CCEEEE-----TT------TTHHHHHHHHHCC
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeecccccccccccceeeEEEcCCcchHHHhhhhHHHHHHHhhhccc
Confidence 6888885 789999999999999999999921 0 0 0
Q ss_pred -------------------hhhcccCCC------cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHh
Q 043530 47 -------------------TSSLSLLPS------LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVS 101 (343)
Q Consensus 47 -------------------~~~~~~l~~------l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 101 (343)
..|...+.+ +++.++|++|+|. +..|+..+|+++|+|.+.+.+..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~-f~~c~~~la~~l~iP~i~~~s~~~~~~----- 154 (500)
T PF00201_consen 81 ANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDA-FDPCGLALAHYLGIPVIIISSSTPMYD----- 154 (500)
T ss_dssp HHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEE-EESSHHHHHHHHHHTHHHHHHCCSCSC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEee-ccchhHHHHHHhcCCeEEEecccccch-----
Confidence 011112211 2333799999999 777999999999999875443321100
Q ss_pred hhcccccCC-CCcccCCC----CC-CCCCCCCCCCccccc-chHHHHHHHHH---------------HhhccCcCEEEEe
Q 043530 102 FHTHTLVGS-KDAIEMPT----LE-PIPKPWILPPLFQDM-NNFLKTSFIEN---------------AKKMTESDGILVN 159 (343)
Q Consensus 102 ~~~~~~~~~-~~~~~~p~----~~-~~~~~~~l~~~~~~~-~~~~~~~~~~~---------------~~~~~~~~~~l~~ 159 (343)
..... .+. ..+..+|. ++ .|.+.+|+.+++... ...+...+... .+...+.+.+++|
T Consensus 155 ~~~~~-~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~n 233 (500)
T PF00201_consen 155 LSSFS-GGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLIN 233 (500)
T ss_dssp CTCCT-SCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSS
T ss_pred hhhhc-cCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhh
Confidence 00000 010 00111221 11 344444333332110 00111111000 0111233456777
Q ss_pred CcccccchhHHhhhcCCccCCCCcEEEeccCCCCCCCCCC--cchhhhcCCCCceeEEeccCCcc-CCHHHHHHHHH---
Q 043530 160 ISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLYGFEKSQ--PLAWLDDQATGSVVDVSFGSRTA-MSREQLRELGD--- 233 (343)
Q Consensus 160 s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~~~~~~~--~~~wl~~~~~~~vVyvs~GS~~~-~~~~~~~~l~~--- 233 (343)
+.+.++.+. |..|++++||+++..++++.+ ...|++...++++|||||||+.. ++.+.+++++.
T Consensus 234 s~~~ld~pr----------p~~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~ 303 (500)
T PF00201_consen 234 SHPSLDFPR----------PLLPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFE 303 (500)
T ss_dssp TEEE----H----------HHHCTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHH
T ss_pred ccccCcCCc----------chhhcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHh
Confidence 877777653 336899999999887665543 27788875578999999999975 44444666665
Q ss_pred ---------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh
Q 043530 234 ---------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT 274 (343)
Q Consensus 234 ---------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~ 274 (343)
++||||||+||++||+++|||||++|+++||+.||+++++.
T Consensus 304 ~~~~~~iW~~~~~~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~ 383 (500)
T PF00201_consen 304 NLPQRFIWKYEGEPPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK 383 (500)
T ss_dssp CSTTEEEEEETCSHGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT
T ss_pred hCCCcccccccccccccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE
Confidence 89999999999999999999999999999999999999999
Q ss_pred cceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCC
Q 043530 275 GMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGG 328 (343)
Q Consensus 275 G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg 328 (343)
|+|+.+ +...+|.++|.++|+++|+|++|++||+++++++++...+.-
T Consensus 384 G~g~~l------~~~~~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~p~ 431 (500)
T PF00201_consen 384 GVGVVL------DKNDLTEEELRAAIREVLENPSYKENAKRLSSLFRDRPISPL 431 (500)
T ss_dssp TSEEEE------GGGC-SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT-------
T ss_pred eeEEEE------EecCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCHH
Confidence 999999 567899999999999999999999999999999998865444
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.5e-39 Score=311.31 Aligned_cols=291 Identities=17% Similarity=0.176 Sum_probs=208.4
Q ss_pred CceEEEE-cCCCccChHHHHHHHHHHHHCCCCCC---c-------c--h-----H---------h---------------
Q 043530 10 SRLFALL-SSSGMGHLTPFLRLAALLTAHHVKSP---E-------N--H-----V---------T--------------- 47 (343)
Q Consensus 10 ~~~il~~-~~p~~GH~~p~l~La~~L~~rGh~V~---~-------~--~-----i---------~--------------- 47 (343)
..||+.+ |.++.||..-+..|+++|++|||+|| + . . + .
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASHLCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccCCCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 3467755 88999999999999999999999991 1 0 0 0 0
Q ss_pred ----------------hhcccCCC------cC--CCCCCEEEECCCCccchHHHHHHc-CCCcEEEecccHHHHHHHHhh
Q 043530 48 ----------------SSLSLLPS------LS--SPPLSAPVTDMTLTASVLPISRAI-NVPNYIFFTSSAKMLTLFVSF 102 (343)
Q Consensus 48 ----------------~~~~~l~~------l~--~~~~D~vi~D~~~~~~~~~~A~~l-giP~v~~~~~~~~~~~~~~~~ 102 (343)
.|...+.+ ++ +.++|+||+|. +..|+..+|+++ ++|.|.+++..........
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~-~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~-- 176 (507)
T PHA03392 100 ADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEA-FLDYPLVFSHLFGDAPVIQISSGYGLAENFET-- 176 (507)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecc-cchhHHHHHHHhCCCCEEEEcCCCCchhHHHh--
Confidence 01112222 44 55799999998 778999999999 9998888776543222110
Q ss_pred hcccccCCCCcccCCCCC-----CCCCCCCCCCccccc---------chHHHHHHHHH--------HhhccCcCEEEEeC
Q 043530 103 HTHTLVGSKDAIEMPTLE-----PIPKPWILPPLFQDM---------NNFLKTSFIEN--------AKKMTESDGILVNI 160 (343)
Q Consensus 103 ~~~~~~~~~~~~~~p~~~-----~~~~~~~l~~~~~~~---------~~~~~~~~~~~--------~~~~~~~~~~l~~s 160 (343)
..+. ...+..+|... .|.+.+|+-+++... .....+...+. .+..++.+.+++|+
T Consensus 177 --~gg~-p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns 253 (507)
T PHA03392 177 --MGAV-SRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNV 253 (507)
T ss_pred --hccC-CCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEec
Confidence 0001 01111233221 344444433322100 00000111111 12234567999999
Q ss_pred cccccchhHHhhhcCCccCCCCcEEEeccCCCCC-C-CC-C-CcchhhhcCCCCceeEEeccCCcc---CCHHHHHHHHH
Q 043530 161 SKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLYG-F-EK-S-QPLAWLDDQATGSVVDVSFGSRTA---MSREQLRELGD 233 (343)
Q Consensus 161 ~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~~-~-~~-~-~~~~wl~~~~~~~vVyvs~GS~~~---~~~~~~~~l~~ 233 (343)
.+.++.+. |.+|++++|||++... . ++ + +..+|++.++ +++|||||||+.. ++.+.++.+++
T Consensus 254 ~~~~d~~r----------p~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~~~~~~~~l~ 322 (507)
T PHA03392 254 HPVFDNNR----------PVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMDNEFLQMLLR 322 (507)
T ss_pred CccccCCC----------CCCCCeeeecccccCCCCCCCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCCHHHHHHHHH
Confidence 99999873 4589999999998743 2 22 2 3378998764 5899999999863 56666666654
Q ss_pred -------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHH
Q 043530 234 -------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADV 270 (343)
Q Consensus 234 -------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~ 270 (343)
++||||||+||++||+++|||+|++|+++||+.||+|
T Consensus 323 a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~r 402 (507)
T PHA03392 323 TFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNK 402 (507)
T ss_pred HHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHH
Confidence 8999999999999999999999999999999999999
Q ss_pred HHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 043530 271 VERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTA 323 (343)
Q Consensus 271 v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a 323 (343)
++++|+|+.+ +...+|+++|.++|+++|+|++||+||+++++.+++.
T Consensus 403 v~~~G~G~~l------~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 403 YVELGIGRAL------DTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQ 449 (507)
T ss_pred HHHcCcEEEe------ccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 9999999999 5678899999999999999999999999999999875
No 24
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=4.3e-34 Score=270.44 Aligned_cols=289 Identities=20% Similarity=0.207 Sum_probs=188.9
Q ss_pred EcCCCccChHHHHHHHHHHHHCCCCC---Cc----chH--------------hh-------------------------h
Q 043530 16 LSSSGMGHLTPFLRLAALLTAHHVKS---PE----NHV--------------TS-------------------------S 49 (343)
Q Consensus 16 ~~~p~~GH~~p~l~La~~L~~rGh~V---~~----~~i--------------~~-------------------------~ 49 (343)
+.+|+.||++|++.||++|++|||+| +. +.+ .. .
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAGAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDV 80 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHcCCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHH
Confidence 36799999999999999999999999 21 111 00 0
Q ss_pred cccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCCCCCC-CCCCC
Q 043530 50 LSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPI-PKPWI 127 (343)
Q Consensus 50 ~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~ 127 (343)
.+.+.. +++++||+||+|. +.+++..+|+++|||+|.+++..... ...+. ...|..+.+ .....
T Consensus 81 ~~~l~~~~~~~~pDlVi~d~-~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~ 146 (392)
T TIGR01426 81 LPQLEEAYKGDRPDLIVYDI-ASWTGRLLARKWDVPVISSFPTFAAN----EEFEE---------MVSPAGEGSAEEGAI 146 (392)
T ss_pred HHHHHHHhcCCCCCEEEECC-ccHHHHHHHHHhCCCEEEEehhhccc----ccccc---------cccccchhhhhhhcc
Confidence 001112 4556899999999 77789999999999999886542110 00000 000000000 00000
Q ss_pred CCCcccccchHHHHHHHHHH------hh--ccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCCCCCCCCC
Q 043530 128 LPPLFQDMNNFLKTSFIENA------KK--MTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLYGFEKSQ 199 (343)
Q Consensus 128 l~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~~~~~~~ 199 (343)
.+.......+...+...+.. .. ....+..+..+.+.|+++ .+. ..++++++||+.....+
T Consensus 147 ~~~~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~----~~~~~~~~Gp~~~~~~~--- 214 (392)
T TIGR01426 147 AERGLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GET----FDDSFTFVGPCIGDRKE--- 214 (392)
T ss_pred ccchhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccc----cCCCeEEECCCCCCccc---
Confidence 00000000011111111100 00 011222344444444432 111 14579999998765332
Q ss_pred cchhhhcCCCCceeEEeccCCccCCHHHHHHHHH--------------------------------------------hh
Q 043530 200 PLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD--------------------------------------------GG 235 (343)
Q Consensus 200 ~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--------------------------------------------~~ 235 (343)
...|....+++++|||||||+.....+.++++.. ++
T Consensus 215 ~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~ 294 (392)
T TIGR01426 215 DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQLEILKKADA 294 (392)
T ss_pred cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCHHHHHhhCCE
Confidence 2347776667899999999986655555444433 99
Q ss_pred cccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHH
Q 043530 236 FLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMR 315 (343)
Q Consensus 236 fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~ 315 (343)
||||||+||++||+++|||+|++|...||+.||+++++.|+|+.+ ....+++++|.++|+++|.|++|++++++
T Consensus 295 ~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l------~~~~~~~~~l~~ai~~~l~~~~~~~~~~~ 368 (392)
T TIGR01426 295 FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHL------PPEEVTAEKLREAVLAVLSDPRYAERLRK 368 (392)
T ss_pred EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEe------ccccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 45678999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 316 IREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 316 l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+++.+++. ++...+.+.+.+.
T Consensus 369 l~~~~~~~----~~~~~aa~~i~~~ 389 (392)
T TIGR01426 369 MRAEIREA----GGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHc----CCHHHHHHHHHHh
Confidence 99998754 4556666555443
No 25
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=5e-34 Score=278.00 Aligned_cols=295 Identities=30% Similarity=0.413 Sum_probs=195.3
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCCC----c-------c-h-------H----------h-------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKSP----E-------N-H-------V----------T------------- 47 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~----~-------~-~-------i----------~------------- 47 (343)
+.|++++++|++||++|++.||+.|+++||+|| . . . + .
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLD 84 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHH
Confidence 679999999999999999999999999999992 1 1 0 0 0
Q ss_pred ----------hhcccCCC-------cCCCCCCEEEECCCCccchHHHHHHcC-CCcEEEecccHHHHHHHHhhhcccccC
Q 043530 48 ----------SSLSLLPS-------LSSPPLSAPVTDMTLTASVLPISRAIN-VPNYIFFTSSAKMLTLFVSFHTHTLVG 109 (343)
Q Consensus 48 ----------~~~~~l~~-------l~~~~~D~vi~D~~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~~~ 109 (343)
.+...+++ ....++|++|+|. +..|...+|...+ ++...+.+.++.......+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~---- 159 (496)
T KOG1192|consen 85 ISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDP-FLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS---- 159 (496)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEech-hhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc----
Confidence 00111222 0111399999999 6667777777765 88888887776554432221111
Q ss_pred CCCcccCCCCC------CCCCCCCCCCccc-ccchHHH---------HHHHHHHhh----ccCcCEEEEeC-cccccchh
Q 043530 110 SKDAIEMPTLE------PIPKPWILPPLFQ-DMNNFLK---------TSFIENAKK----MTESDGILVNI-SKTIEGKT 168 (343)
Q Consensus 110 ~~~~~~~p~~~------~~~~~~~l~~~~~-~~~~~~~---------~~~~~~~~~----~~~~~~~l~~s-~~~le~~~ 168 (343)
.+|... .+...+|.+.... ....... ......... ....+.++.|+ +..++...
T Consensus 160 -----~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~ 234 (496)
T KOG1192|consen 160 -----YVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNP 234 (496)
T ss_pred -----ccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCc
Confidence 111111 0111110000000 0000000 000000000 01122344444 55555544
Q ss_pred HHhhhcCCccCCCCcEEEeccCCCCCCCCC--CcchhhhcCCCC--ceeEEeccCCc---cCCHHHHHHHHH--------
Q 043530 169 LAELNGGKVIEGLPLVIPIGLLPLYGFEKS--QPLAWLDDQATG--SVVDVSFGSRT---AMSREQLRELGD-------- 233 (343)
Q Consensus 169 ~~~~~~~~~~~~~p~v~~VGpl~~~~~~~~--~~~~wl~~~~~~--~vVyvs~GS~~---~~~~~~~~~l~~-------- 233 (343)
...++.. |..+++++|||++....... .+.+|++..+.. +||||||||+. .++.++.++++.
T Consensus 235 ~~~~~~~---~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~ 311 (496)
T KOG1192|consen 235 LLDFEPR---PLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGV 311 (496)
T ss_pred ccCCCCC---CCCCCceEECcEEecCccccccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCc
Confidence 3333221 33689999999998744332 358999988765 99999999998 788888877765
Q ss_pred --------------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHH
Q 043530 234 --------------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINAD 269 (343)
Q Consensus 234 --------------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~ 269 (343)
++||||||||||+|++++|||||++|+++||+.||+
T Consensus 312 ~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~ 391 (496)
T KOG1192|consen 312 TFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNAR 391 (496)
T ss_pred eEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHH
Confidence 899999999999999999999999999999999999
Q ss_pred HHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 043530 270 VVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTA 323 (343)
Q Consensus 270 ~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a 323 (343)
++++.|.|..+ .....+.+++.+++.+++.+++|+++|+++++..++.
T Consensus 392 ~i~~~g~~~v~------~~~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~ 439 (496)
T KOG1192|consen 392 LLVRHGGGGVL------DKRDLVSEELLEAIKEILENEEYKEAAKRLSEILRDQ 439 (496)
T ss_pred HHHhCCCEEEE------ehhhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcC
Confidence 99999777666 2445555559999999999999999999999988743
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=1.8e-32 Score=260.04 Aligned_cols=274 Identities=17% Similarity=0.155 Sum_probs=170.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc-c---hH-------------------h-h---------------
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS---PE-N---HV-------------------T-S--------------- 48 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~-~---~i-------------------~-~--------------- 48 (343)
+||+|+++|+.||++|++.||++|++|||+| +. . .+ . .
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPGLLLG 80 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchHHHHH
Confidence 5899999999999999999999999999999 11 0 00 0 0
Q ss_pred --------hcccCCC----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccC
Q 043530 49 --------SLSLLPS----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEM 116 (343)
Q Consensus 49 --------~~~~l~~----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (343)
....+++ +++++||+||+|. +.+++..+|+++|||++.+++++...... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~-~~~~~~~~A~~~giP~v~~~~~~~~~~~~----------------~~ 143 (401)
T cd03784 81 ALRLLRREAEAMLDDLVAAARDWGPDLVVADP-LAFAGAVAAEALGIPAVRLLLGPDTPTSA----------------FP 143 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCEEEeCc-HHHHHHHHHHHhCCCeEEeecccCCcccc----------------CC
Confidence 0011111 4457999999999 77789999999999999998764321000 00
Q ss_pred CCCCCCCCCCCCCCccc--ccchHHHHHHHHHHhh--cc-------CcCEEEEeCcccccchhHHhhhcCCccCCCCcEE
Q 043530 117 PTLEPIPKPWILPPLFQ--DMNNFLKTSFIENAKK--MT-------ESDGILVNISKTIEGKTLAELNGGKVIEGLPLVI 185 (343)
Q Consensus 117 p~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~--~~-------~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~ 185 (343)
|...... .. ...... .........+...... .. ..+..+....+.+.+.. .+ ..++..
T Consensus 144 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~ 212 (401)
T cd03784 144 PPLGRAN-LR-LYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPP----PD-----WPRFDL 212 (401)
T ss_pred CccchHH-HH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCC----CC-----ccccCc
Confidence 0000000 00 000000 0000011111111111 11 01122222222222111 01 123455
Q ss_pred Eec-cCCCCCCC---CCCcchhhhcCCCCceeEEeccCCccCCHHHH-HHHHH---------------------------
Q 043530 186 PIG-LLPLYGFE---KSQPLAWLDDQATGSVVDVSFGSRTAMSREQL-RELGD--------------------------- 233 (343)
Q Consensus 186 ~VG-pl~~~~~~---~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~-~~l~~--------------------------- 233 (343)
++| ++...... +.+...|++. .+++|||||||+.....+.+ ..+..
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v 290 (401)
T cd03784 213 VTGYGFRDVPYNGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNV 290 (401)
T ss_pred EeCCCCCCCCCCCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCce
Confidence 664 33322221 1223566654 46799999999976444333 22221
Q ss_pred ---------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHH
Q 043530 234 ---------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAE 298 (343)
Q Consensus 234 ---------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ 298 (343)
++||||||+||++||+++|||+|++|+..||+.||+++++.|+|+.+ ....+++++|.+
T Consensus 291 ~~~~~~p~~~ll~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l------~~~~~~~~~l~~ 364 (401)
T cd03784 291 RVVDFVPHDWLLPRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL------DPRELTAERLAA 364 (401)
T ss_pred EEeCCCCHHHHhhhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC------CcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999 455689999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHH
Q 043530 299 NISEMMGNELLRIQEMRIREEAR 321 (343)
Q Consensus 299 ai~~vl~~~~~r~~a~~l~~~~~ 321 (343)
+|++++.+ .++++++++++.++
T Consensus 365 al~~~l~~-~~~~~~~~~~~~~~ 386 (401)
T cd03784 365 ALRRLLDP-PSRRRAAALLRRIR 386 (401)
T ss_pred HHHHHhCH-HHHHHHHHHHHHHH
Confidence 99999975 56666777777664
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=248.63 Aligned_cols=142 Identities=24% Similarity=0.328 Sum_probs=113.5
Q ss_pred cEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------------
Q 043530 183 LVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------------- 233 (343)
Q Consensus 183 ~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------------- 233 (343)
...++||+......+ ...| ...++++||+||||.... .+.++.+.+
T Consensus 214 ~~~~~~~~~~~~~~~--~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v 288 (406)
T COG1819 214 IGPYIGPLLGEAANE--LPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIV 288 (406)
T ss_pred CcCcccccccccccc--Ccch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEE
Confidence 355677776553321 1334 234578999999999865 333333322
Q ss_pred -------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 -------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 -------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||||||+|||+|||++|||+|++|...||+.||.++++.|+|+.+ .....|.+.++++|
T Consensus 289 ~~~~p~~~~l~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l------~~~~l~~~~l~~av 362 (406)
T COG1819 289 ADYVPQLELLPRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL------PFEELTEERLRAAV 362 (406)
T ss_pred ecCCCHHHHhhhcCEEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec------CcccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 67799999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 301 SEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 301 ~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+++|.|+.|+++++++++.+++. +| .+.+.+.|++
T Consensus 363 ~~vL~~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~ 397 (406)
T COG1819 363 NEVLADDSYRRAAERLAEEFKEE---DG--PAKAADLLEE 397 (406)
T ss_pred HHHhcCHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHH
Confidence 99999999999999999999875 33 4444444444
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.83 E-value=1.5e-19 Score=166.17 Aligned_cols=64 Identities=23% Similarity=0.423 Sum_probs=60.9
Q ss_pred hhcccccChhHHHHHHHhCceEEeccC--CcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQ--HGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEM 303 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~--~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~v 303 (343)
+++|||||+||++|++++|+|++++|. +.||..||+++++.|+|+.+ ...+++++.|+++|+++
T Consensus 252 d~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 252 DLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL------SQEDLTPERLAEFLERL 317 (318)
T ss_pred CEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc------ccccCCHHHHHHHHhcC
Confidence 999999999999999999999999999 78999999999999999999 57899999999999764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.78 E-value=1.3e-17 Score=155.09 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=67.9
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCC-----cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH-
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQH-----GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE- 307 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~-----~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~- 307 (343)
+++|||||.+|+.|++++|+|+|.+|+. .||..||+.+++.|+|..+ ....++++.|.+++.+++.|+
T Consensus 254 dlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l------~~~~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 254 DFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL------YEEDVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred CEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc------chhcCCHHHHHHHHHHHHcCHH
Confidence 9999999999999999999999999985 4899999999999999999 567889999999999999886
Q ss_pred HHHHHHHH
Q 043530 308 LLRIQEMR 315 (343)
Q Consensus 308 ~~r~~a~~ 315 (343)
.|++++++
T Consensus 328 ~~~~~~~~ 335 (352)
T PRK12446 328 KYKTALKK 335 (352)
T ss_pred HHHHHHHH
Confidence 55554444
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.67 E-value=1.8e-15 Score=139.41 Aligned_cols=68 Identities=22% Similarity=0.295 Sum_probs=59.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCc--chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHG--DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
++||||||++|++||+++|+|++.+|... ||..||+.+++.|+|+.+ ....+ ++.+++.++++|+.|+
T Consensus 249 d~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l------~~~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 249 ELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL------EYKEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred CEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc------ChhhH---HHHHHHHhcccccccc
Confidence 99999999999999999999999999855 899999999999999998 33333 6777777888777764
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.57 E-value=3.1e-13 Score=124.88 Aligned_cols=67 Identities=22% Similarity=0.363 Sum_probs=62.6
Q ss_pred hhcccccChhHHHHHHHhCceEEeccC-Cc---chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQ-HG---DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~-~~---DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++||+.|.+|+.|.+++|+|.+.+|. .+ +|..||+.+++.|.|+.+ +...+|.+++.+.|.+++.+
T Consensus 254 DLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i------~~~~lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 254 DLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI------RQSELTPEKLAELILRLLSN 324 (357)
T ss_pred cEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe------ccccCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999995 33 899999999999999999 56779999999999999987
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.50 E-value=1.7e-12 Score=121.32 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=81.7
Q ss_pred hhcccccChhHHHHHHHhCceEEeccC----CcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQ----HGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~----~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++||+|+|.++++||+++|+|+|+.|. .++|..|+..+.+.|.|..+ ....+++++++++|.++++|+++
T Consensus 254 d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~------~~~~~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 254 DLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI------PQSDLTPEKLAEKLLELLSDPER 327 (357)
T ss_pred CEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE------EcccCCHHHHHHHHHHHHcCHHH
Confidence 999999999999999999999999996 47899999999999999999 45567899999999999999888
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 310 RIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 310 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+++..+-+... .+.++..+.++.+.+.++
T Consensus 328 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 328 LEAMAEAARAL----GKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHhc----CCcCHHHHHHHHHHHHhh
Confidence 86665554443 345666677766666553
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.34 E-value=7.6e-11 Score=109.67 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=65.3
Q ss_pred hhcccccChhHHHHHHHhCceEEeccC----CcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQ----HGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~----~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++|+++|.++++||+++|+|+++.|. ..+|..|+..+.+.|.|..+ .....+.+++.++|++++.|++.
T Consensus 254 d~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v------~~~~~~~~~l~~~i~~ll~~~~~ 327 (350)
T cd03785 254 DLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI------PQEELTPERLAAALLELLSDPER 327 (350)
T ss_pred CEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE------ecCCCCHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999985 46799999999999999988 34446899999999999998876
Q ss_pred HHHHHH
Q 043530 310 RIQEMR 315 (343)
Q Consensus 310 r~~a~~ 315 (343)
+++..+
T Consensus 328 ~~~~~~ 333 (350)
T cd03785 328 LKAMAE 333 (350)
T ss_pred HHHHHH
Confidence 554443
No 34
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.33 E-value=3.9e-11 Score=113.23 Aligned_cols=99 Identities=13% Similarity=0.030 Sum_probs=85.6
Q ss_pred hhcccccChhHHHHHHHhCceEEec----cCCc---------chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAW----PQHG---------DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~----P~~~---------DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||+-.|..|+ |++++|+|+|.+ |+.. +|..|++.+...++...+ -.+.+|++.|.+.+
T Consensus 269 Dl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel------~q~~~~~~~l~~~~ 341 (385)
T TIGR00215 269 DAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPEL------LQEECTPHPLAIAL 341 (385)
T ss_pred CEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhh------cCCCCCHHHHHHHH
Confidence 899999999877 999999999999 7643 277899999999999888 46789999999999
Q ss_pred HHHhCCH----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 301 SEMMGNE----LLRIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 301 ~~vl~~~----~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
.++|.|+ +++++.++--+.+++...++|.+.++.+.+++
T Consensus 342 ~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 342 LLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVLE 384 (385)
T ss_pred HHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 9999999 88888888888888888777888888776654
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.20 E-value=8.3e-10 Score=102.60 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=64.8
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCC---cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQH---GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~---~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
++||+++|.++++||+++|+|+|+.|.. .+|..|+..+.+.|.|..+ ..+..+.+++.++|++++.|++.+
T Consensus 252 d~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~------~~~~~~~~~l~~~i~~ll~~~~~~ 325 (348)
T TIGR01133 252 DLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI------RQKELLPEKLLEALLKLLLDPANL 325 (348)
T ss_pred CEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE------ecccCCHHHHHHHHHHHHcCHHHH
Confidence 9999999988999999999999999863 4788899999999999888 455668999999999999998776
Q ss_pred HHHHH
Q 043530 311 IQEMR 315 (343)
Q Consensus 311 ~~a~~ 315 (343)
++..+
T Consensus 326 ~~~~~ 330 (348)
T TIGR01133 326 EAMAE 330 (348)
T ss_pred HHHHH
Confidence 54433
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.18 E-value=4.9e-09 Score=98.89 Aligned_cols=93 Identities=17% Similarity=0.259 Sum_probs=69.9
Q ss_pred hhcccccChhHHHHHHHhCceEEec-cCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAW-PQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~-P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
++||+..|..++.||+++|+|+|+. |..+.|..|+..+.+.|.|+.. -+.+++.++|.+++.|++.+++
T Consensus 275 D~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~----------~~~~~l~~~i~~ll~~~~~~~~ 344 (380)
T PRK13609 275 SCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVI----------RDDEEVFAKTEALLQDDMKLLQ 344 (380)
T ss_pred cEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEE----------CCHHHHHHHHHHHHCCHHHHHH
Confidence 8999999988999999999999985 6777788999999888998765 2568999999999998876654
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 313 EMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 313 a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
..+ ..++. ....+.++-++.+++.
T Consensus 345 m~~---~~~~~-~~~~s~~~i~~~i~~~ 368 (380)
T PRK13609 345 MKE---AMKSL-YLPEPADHIVDDILAE 368 (380)
T ss_pred HHH---HHHHh-CCCchHHHHHHHHHHh
Confidence 433 33332 3334555555555543
No 37
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.10 E-value=3.9e-11 Score=99.84 Aligned_cols=70 Identities=23% Similarity=0.358 Sum_probs=58.7
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCc----chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHG----DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~----DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++|||||.+|++|++++|+|+|++|... +|..||..+++.|+|+.+ .....+.++|.++|.+++.++..
T Consensus 74 DlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~------~~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 74 DLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML------DESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp SEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS------ECCC-SCCCHHHHHHCHCCCHH-
T ss_pred CEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc------CcccCCHHHHHHHHHHHHcCcHH
Confidence 89999999999999999999999999988 999999999999999998 45567799999999999988765
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.09 E-value=1.7e-08 Score=95.59 Aligned_cols=92 Identities=12% Similarity=0.137 Sum_probs=70.2
Q ss_pred hhcccccChhHHHHHHHhCceEEec-cCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAW-PQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~-P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
++||+..|..|+.||+++|+|+|+. |.-+.|..|+..+.+.|+|+.. . +.+++.++|.+++.|++.+
T Consensus 275 Dl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~------~----~~~~l~~~i~~ll~~~~~~-- 342 (391)
T PRK13608 275 QLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA------D----TPEEAIKIVASLTNGNEQL-- 342 (391)
T ss_pred hEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe------C----CHHHHHHHHHHHhcCHHHH--
Confidence 9999998888999999999999998 7766778999999999999876 2 7899999999999887544
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 313 EMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 313 a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
+++++.+++. .+..+...-++.+++
T Consensus 343 -~~m~~~~~~~-~~~~s~~~i~~~l~~ 367 (391)
T PRK13608 343 -TNMISTMEQD-KIKYATQTICRDLLD 367 (391)
T ss_pred -HHHHHHHHHh-cCCCCHHHHHHHHHH
Confidence 3344444443 333444544444444
No 39
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.92 E-value=1e-07 Score=89.82 Aligned_cols=100 Identities=10% Similarity=0.048 Sum_probs=66.5
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchh-HHHH------------HHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQK-INAD------------VVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~-~na~------------~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
+++|+-+|.+++ ||+++|+|+|+.|-..--+ ..++ .+.+.+++..+ .....+++++.+++
T Consensus 263 Dl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~l~~~i 335 (380)
T PRK00025 263 DAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPEL------LQEEATPEKLARAL 335 (380)
T ss_pred CEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhh------cCCCCCHHHHHHHH
Confidence 899999998777 9999999999986432111 1222 22222323333 23567899999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 301 SEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 301 ~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
.++++|++.+++..+-.+.+++.. ..|++.+.++.+.+.+
T Consensus 336 ~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 336 LPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 999999988776666555555544 4566666666665543
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.91 E-value=1.2e-08 Score=91.99 Aligned_cols=36 Identities=17% Similarity=0.076 Sum_probs=34.6
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADV 270 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~ 270 (343)
+++||+|| +|++|+++.|+|++++|+..+|..||+.
T Consensus 243 Dl~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DLAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CEEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99999999 9999999999999999999999999975
No 41
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.90 E-value=9.3e-08 Score=85.67 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=61.4
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCc---chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHG---DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~---DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
+.+|+-||.||++|-|++|+|-+++|... +|..-|.|++++|.-=.+ ..+.+|++.++++|...+.
T Consensus 296 ~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL------~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 296 RLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL------LPENLTPQNLADALKAALA 364 (400)
T ss_pred heeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee------CcccCChHHHHHHHHhccc
Confidence 99999999999999999999999999855 899999999999998777 5788999999999999986
No 42
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=98.56 E-value=2.4e-08 Score=80.20 Aligned_cols=79 Identities=14% Similarity=0.198 Sum_probs=56.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc-------------------c-hH--------------------hhh
Q 043530 13 FALLSSSGMGHLTPFLRLAALLTAHHVKS---PE-------------------N-HV--------------------TSS 49 (343)
Q Consensus 13 il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~-------------------~-~i--------------------~~~ 49 (343)
|+|++.++.||++|++.|+++|.+|||+| ++ + .. ...
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAAGLEFVPIPGDSRLPRSLEPLANLRRLARLIRGLEEA 80 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHTT-EEEESSSCGGGGHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccccCceEEEecCCcCcCcccchhhhhhhHHHHhhhhhHH
Confidence 78999999999999999999999999999 11 1 00 001
Q ss_pred cccCC----C-----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 50 LSLLP----S-----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 50 ~~~l~----~-----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
...+. + ......|+++.+. ....+..+|+++|||++.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 81 MRILARFRPDLVVAAGGYVADDVIIAAP-LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHHHCCCCHCTTTTECCEECHHH-HHTHHHHHHHHHTS-EEEEESSG
T ss_pred HHHhhccCcchhhhccCcccchHHHhhh-hcCccceeEhhhCchHHHHhhCC
Confidence 11111 1 1223688888888 77788999999999999877654
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.55 E-value=3.2e-05 Score=71.37 Aligned_cols=101 Identities=23% Similarity=0.203 Sum_probs=66.8
Q ss_pred CHHHHHHHHH--hhcccccC----hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 224 SREQLRELGD--GGFLTYCG----WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvtHgG----~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
+.+++.++.. ++++..+. .++++||+++|+|+|+.+..+ +...+.+.+.|... ..-+.+++.
T Consensus 256 ~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~--------~~~~~~~l~ 323 (364)
T cd03814 256 DGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLV--------EPGDAEAFA 323 (364)
T ss_pred CHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEc--------CCCCHHHHH
Confidence 3444444433 77775543 478999999999999987554 44555666888776 234678899
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 298 ENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 298 ~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
++|.+++.|++.+++..+-+.... +.-+.....+++++.
T Consensus 324 ~~i~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 362 (364)
T cd03814 324 AALAALLADPELRRRMAARARAEA----ERRSWEAFLDNLLEA 362 (364)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHh
Confidence 999999998877665554444432 235555556666554
No 44
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.37 E-value=8.2e-05 Score=65.16 Aligned_cols=78 Identities=18% Similarity=0.100 Sum_probs=65.2
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
++.|+-+| .|+.|++.-|+|.+++|+.--|.--|...+..|+-..+ +.. ++++....-+.+++.|...|.+.
T Consensus 229 d~aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l------~~~-l~~~~~~~~~~~i~~d~~~rk~l 300 (318)
T COG3980 229 DLAISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQL------GYH-LKDLAKDYEILQIQKDYARRKNL 300 (318)
T ss_pred chheeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhc------cCC-CchHHHHHHHHHhhhCHHHhhhh
Confidence 77888766 58999999999999999999999999999999999888 333 78888888888999888887776
Q ss_pred HHHHHH
Q 043530 314 MRIREE 319 (343)
Q Consensus 314 ~~l~~~ 319 (343)
-.-++.
T Consensus 301 ~~~~~~ 306 (318)
T COG3980 301 SFGSKL 306 (318)
T ss_pred hhccce
Confidence 555444
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.17 E-value=0.0006 Score=66.19 Aligned_cols=72 Identities=19% Similarity=0.141 Sum_probs=48.5
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHH---hcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVER---TGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~---~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++||.- +--++++||+++|+|+|+-...+ ....+.+ .+.|..++ .-+.++++++|.++++|
T Consensus 333 Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~--------~~d~~~la~~i~~ll~~ 400 (465)
T PLN02871 333 DVFVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYT--------PGDVDDCVEKLETLLAD 400 (465)
T ss_pred CEEEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeC--------CCCHHHHHHHHHHHHhC
Confidence 666643 22457899999999999875432 2333444 46777772 23679999999999998
Q ss_pred HHHHHHHHHHH
Q 043530 307 ELLRIQEMRIR 317 (343)
Q Consensus 307 ~~~r~~a~~l~ 317 (343)
++.+++..+-+
T Consensus 401 ~~~~~~~~~~a 411 (465)
T PLN02871 401 PELRERMGAAA 411 (465)
T ss_pred HHHHHHHHHHH
Confidence 87654443333
No 46
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.06 E-value=3e-05 Score=73.29 Aligned_cols=93 Identities=18% Similarity=0.222 Sum_probs=69.6
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchh-HHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC-HHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQK-INADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN-ELLRI 311 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~-~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~-~~~r~ 311 (343)
++||+.+|-++++||+++|+|+|+.+....|. .|+..+.+.|.|+.+ -+++++.++|.+++.| ++.+
T Consensus 284 Dv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~----------~~~~~la~~i~~ll~~~~~~~- 352 (382)
T PLN02605 284 DCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS----------ESPKEIARIVAEWFGDKSDEL- 352 (382)
T ss_pred CEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec----------CCHHHHHHHHHHHHcCCHHHH-
Confidence 99999999999999999999999998777776 689889989999755 3789999999999987 6543
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 312 QEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 312 ~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+++++..++. ....++..-++.+++.
T Consensus 353 --~~m~~~~~~~-~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 353 --EAMSENALKL-ARPEAVFDIVHDLHEL 378 (382)
T ss_pred --HHHHHHHHHh-cCCchHHHHHHHHHHH
Confidence 3344444443 3334444444444443
No 47
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.05 E-value=0.0012 Score=60.26 Aligned_cols=68 Identities=22% Similarity=0.150 Sum_probs=47.5
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++++.- |--++++||+++|+|+|+-+..+ +...+.+.+.|..++ .-+.++++++|.+++.+++.
T Consensus 265 di~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~--------~~~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 265 DVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVP--------PGDAEALADAIERLIEDPEL 332 (359)
T ss_pred cEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEEC--------CCCHHHHHHHHHHHHhCHHH
Confidence 555543 23578999999999999965433 344455556777662 33689999999999988765
Q ss_pred HHHH
Q 043530 310 RIQE 313 (343)
Q Consensus 310 r~~a 313 (343)
+++.
T Consensus 333 ~~~~ 336 (359)
T cd03808 333 RARM 336 (359)
T ss_pred HHHH
Confidence 5443
No 48
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.00 E-value=0.00044 Score=63.50 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=52.7
Q ss_pred HHHHHHHHH--hhccc-----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 225 REQLRELGD--GGFLT-----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 225 ~~~~~~l~~--~~fvt-----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
.+++.++.. ++++. -|.-.++.||+++|+|+|+-+.. .+...+.+.+.|..++ .-+.++++
T Consensus 253 ~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~--------~~d~~~l~ 320 (359)
T cd03823 253 QEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLFP--------PGDAEDLA 320 (359)
T ss_pred HHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEEC--------CCCHHHHH
Confidence 344444443 56662 23344789999999999996543 3455555556787772 22489999
Q ss_pred HHHHHHhCCHHHHHHHHH
Q 043530 298 ENISEMMGNELLRIQEMR 315 (343)
Q Consensus 298 ~ai~~vl~~~~~r~~a~~ 315 (343)
++|.++++|++.++...+
T Consensus 321 ~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03823 321 AALERLIDDPDLLERLRA 338 (359)
T ss_pred HHHHHHHhChHHHHHHHH
Confidence 999999998765554443
No 49
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.95 E-value=0.0042 Score=57.13 Aligned_cols=64 Identities=20% Similarity=0.146 Sum_probs=44.6
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++++.- +..++++||+++|+|+|+... ...+..+.+.+.|..++ .... ++.+++.+++++++.
T Consensus 280 d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~~~g~~~~------~~~~---~~~~~i~~l~~~~~~ 346 (374)
T cd03817 280 DLFVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADGENGFLFP------PGDE---ALAEALLRLLQDPEL 346 (374)
T ss_pred CEEEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecCceeEEeC------CCCH---HHHHHHHHHHhChHH
Confidence 555532 345789999999999999654 33455555557787772 2222 999999999998764
Q ss_pred H
Q 043530 310 R 310 (343)
Q Consensus 310 r 310 (343)
+
T Consensus 347 ~ 347 (374)
T cd03817 347 R 347 (374)
T ss_pred H
Confidence 4
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.91 E-value=0.012 Score=54.32 Aligned_cols=102 Identities=21% Similarity=0.197 Sum_probs=61.2
Q ss_pred HHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHH
Q 043530 225 REQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAE 298 (343)
Q Consensus 225 ~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ 298 (343)
.+++.++.. ++++.- |..++++||+++|+|+|+....+ ....+.+.+.|..+ ...+.+++++
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~--------~~~~~~~~~~ 322 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLA--------KPGDPEDLAE 322 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEe--------CCCCHHHHHH
Confidence 344444433 666653 33578999999999999865432 22233333466665 2347899999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 299 NISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 299 ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++.+++.+++.++ ++++..++...+.-+.+...+++++..
T Consensus 323 ~l~~l~~~~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 323 GIEWLLADPDERE---ELGEAARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred HHHHHHhCHHHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999998876443 233333333333455555666665543
No 51
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.89 E-value=0.002 Score=60.59 Aligned_cols=68 Identities=22% Similarity=0.189 Sum_probs=48.1
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++|+.. +--.+++||+++|+|+|+-...+ +...+.+.+.|...+ .-+.++++++|.+++.+++.
T Consensus 304 di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~--------~~~~~~l~~~i~~l~~~~~~ 371 (398)
T cd03800 304 DVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVD--------PRDPEALAAALRRLLTDPAL 371 (398)
T ss_pred CEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeC--------CCCHHHHHHHHHHHHhCHHH
Confidence 666633 22368999999999999876433 444555557888772 23689999999999988765
Q ss_pred HHHH
Q 043530 310 RIQE 313 (343)
Q Consensus 310 r~~a 313 (343)
+++.
T Consensus 372 ~~~~ 375 (398)
T cd03800 372 RRRL 375 (398)
T ss_pred HHHH
Confidence 4433
No 52
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.87 E-value=0.0035 Score=58.40 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=64.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
+-|+-+||+| .+|++++|+|++.=|...-|.+-++++.+.|.|+.++ .++.+.+++..++.|++.+++.
T Consensus 325 GSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~----------~~~~l~~~v~~l~~~~~~r~~~ 393 (419)
T COG1519 325 GSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE----------DADLLAKAVELLLADEDKREAY 393 (419)
T ss_pred CcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC----------CHHHHHHHHHHhcCCHHHHHHH
Confidence 7888899998 6799999999999999999999999999999999992 2788899998888877766665
Q ss_pred HHHHHHH
Q 043530 314 MRIREEA 320 (343)
Q Consensus 314 ~~l~~~~ 320 (343)
.+-...+
T Consensus 394 ~~~~~~~ 400 (419)
T COG1519 394 GRAGLEF 400 (419)
T ss_pred HHHHHHH
Confidence 4444444
No 53
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.86 E-value=3.7e-05 Score=60.78 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=39.9
Q ss_pred hhcccccChhHHHHHHHhCceEEecc----CCcchhHHHHHHHHhcceee
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWP----QHGDQKINADVVERTGMGIW 279 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P----~~~DQ~~na~~v~~~G~G~~ 279 (343)
+++|+|+|.||++|.|..|+|.++++ +-.-|-.-|..+++.|.=..
T Consensus 82 dlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~ 131 (170)
T KOG3349|consen 82 DLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYY 131 (170)
T ss_pred cEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEE
Confidence 99999999999999999999999998 34568888988888876433
No 54
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.79 E-value=0.011 Score=53.65 Aligned_cols=66 Identities=23% Similarity=0.197 Sum_probs=47.8
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhc-ceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTG-MGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
-++++||+++|+|+|+.+..+.+ ..+.+.| .|..++ .-+.++++++|.+++.|++.+++..+-+..
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~--------~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~ 332 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVP--------NGDVEALAEALLRLMEDEELRKRMGANARE 332 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeC--------CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 56899999999999997654433 2344444 777662 345799999999999999877666555433
No 55
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=97.73 E-value=0.00021 Score=67.80 Aligned_cols=93 Identities=16% Similarity=0.212 Sum_probs=67.4
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh----cceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT----GMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~----G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++|+=.|..| .|+...|+|+|.+|.-..|. |+...++. |.++.+. ..+.+.|.+++.+++.|++.
T Consensus 298 DlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~--------~~~~~~l~~~l~~ll~d~~~ 367 (396)
T TIGR03492 298 DLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA--------SKNPEQAAQVVRQLLADPEL 367 (396)
T ss_pred CEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC--------CCCHHHHHHHHHHHHcCHHH
Confidence 99999999766 99999999999999766776 98877664 6666662 24559999999999999876
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 310 RIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 310 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
+++..+ ..++...+++++.+.++.+.+
T Consensus 368 ~~~~~~---~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 368 LERCRR---NGQERMGPPGASARIAESILK 394 (396)
T ss_pred HHHHHH---HHHHhcCCCCHHHHHHHHHHH
Confidence 655442 223333455666665555544
No 56
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.45 E-value=0.032 Score=50.55 Aligned_cols=64 Identities=19% Similarity=0.104 Sum_probs=42.7
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHH---HHHHHHHhCCHHHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQI---AENISEMMGNELLRIQEMR 315 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l---~~ai~~vl~~~~~r~~a~~ 315 (343)
|.-++++||+++|+|+|+-... .....+.+.+.|...+ .-+.+.+ .+++.+++.+++.+.+.++
T Consensus 275 ~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 275 GFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVP--------VGDEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred CCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEEC--------CCCHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 3356889999999999985443 4555666667887772 3356666 5666666667665554444
No 57
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.29 E-value=0.013 Score=54.03 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=49.1
Q ss_pred ccChHHHHHHHHHHHHCCCCC--Cc-------chH------------------hhhcc------cCCC-cCCCCCCEEEE
Q 043530 21 MGHLTPFLRLAALLTAHHVKS--PE-------NHV------------------TSSLS------LLPS-LSSPPLSAPVT 66 (343)
Q Consensus 21 ~GH~~p~l~La~~L~~rGh~V--~~-------~~i------------------~~~~~------~l~~-l~~~~~D~vi~ 66 (343)
.-|+.-+-++.++|.++||+| |. +.+ ..... .|-. +++.+||++|+
T Consensus 10 p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is 89 (335)
T PF04007_consen 10 PAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYKLLKLIKKFKPDVAIS 89 (335)
T ss_pred chHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 349999999999999999999 21 111 00110 1111 45669999996
Q ss_pred CCCCccchHHHHHHcCCCcEEEeccc
Q 043530 67 DMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 67 D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
-. +..+..+|..+|+|.|.|.-+.
T Consensus 90 ~~--s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 90 FG--SPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred cC--cHHHHHHHHHhCCCeEEEecCc
Confidence 44 4567779999999999998764
No 58
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.09 E-value=0.0042 Score=48.47 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=44.4
Q ss_pred HHHHHHHHH--hhcccccChhHHHHHHHhCceEEeccCCc--------chhHHHHHHHHhcceeee
Q 043530 225 REQLRELGD--GGFLTYCGWNSVTKAMWNGVQVLAWPQHG--------DQKINADVVERTGMGIWV 280 (343)
Q Consensus 225 ~~~~~~l~~--~~fvtHgG~~s~~eal~~GVP~l~~P~~~--------DQ~~na~~v~~~G~G~~l 280 (343)
.++++++.. +.+|+|+|-||++.++..++|.+++|-.. -|-.-|..+.+.+.=+..
T Consensus 56 ~~kiQsli~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~ 121 (161)
T COG5017 56 EEKIQSLIHDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVAC 121 (161)
T ss_pred HHHHHHHhhcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEE
Confidence 456666666 89999999999999999999999999433 366677777777766555
No 59
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.05 E-value=0.0053 Score=58.78 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=35.5
Q ss_pred cccChhHHHHHHHhCceEEeccCCc-chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 238 TYCGWNSVTKAMWNGVQVLAWPQHG-DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 238 tHgG~~s~~eal~~GVP~l~~P~~~-DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
..+|.+|++|||+.|||+|.+|--. =.-.-+..+...|+.-.+ .-+.++-.+.--++-.|++++++.
T Consensus 370 p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI---------A~s~~eYv~~Av~La~D~~~l~~l 437 (468)
T PF13844_consen 370 PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI---------ADSEEEYVEIAVRLATDPERLRAL 437 (468)
T ss_dssp SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB----------SSHHHHHHHHHHHHH-HHHHHHH
T ss_pred CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc---------CCCHHHHHHHHHHHhCCHHHHHHH
Confidence 4578899999999999999999322 222233345555777555 234555554444777787766443
No 60
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.02 E-value=0.0063 Score=58.30 Aligned_cols=67 Identities=18% Similarity=0.139 Sum_probs=52.9
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
|..+++||+++|+|+|+-|...++......+.+.|.++.. -+.++++++|.++++|++.+++..+-+
T Consensus 333 ~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~----------~d~~~La~~l~~ll~~~~~~~~m~~~a 399 (425)
T PRK05749 333 GGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV----------EDAEDLAKAVTYLLTDPDARQAYGEAG 399 (425)
T ss_pred CCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE----------CCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4445999999999999999988888888777777877665 257999999999999887665444333
No 61
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=96.82 E-value=0.0031 Score=59.12 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=61.3
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
+++++-.|.. +.||+++|+|+|..+-.++++. +.+.|.++.+ .-++++|.+++.+++.|++.+++.
T Consensus 276 d~vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv---------~~d~~~i~~ai~~ll~~~~~~~~~ 341 (365)
T TIGR00236 276 HLILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLV---------GTDKENITKAAKRLLTDPDEYKKM 341 (365)
T ss_pred CEEEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhcCceEEe---------CCCHHHHHHHHHHHHhChHHHHHh
Confidence 7788876643 7999999999999876565542 3345777655 137899999999999988777665
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 314 MRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 314 ~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
..-... ..+|+++.+-++.+.+
T Consensus 342 ~~~~~~----~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 342 SNASNP----YGDGEASERIVEELLN 363 (365)
T ss_pred hhcCCC----CcCchHHHHHHHHHHh
Confidence 443322 2456666666665544
No 62
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.72 E-value=0.17 Score=47.51 Aligned_cols=99 Identities=16% Similarity=0.076 Sum_probs=65.3
Q ss_pred hhcccccChhHHHHHHHhCceEEecc-CCcchhHHHHHHHHhc-ceee---eeccCC--CCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWP-QHGDQKINADVVERTG-MGIW---VQSWGW--GGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P-~~~DQ~~na~~v~~~G-~G~~---l~~~~~--~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++.+.-.| ..|+|+..+|+|||+.= +..=....|+++.+.. +|+. .++... --.+.+|++.|.+++.+++.|
T Consensus 262 d~al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 262 DAALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN 340 (373)
T ss_pred cchhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC
Confidence 34444344 35789999999998763 3334455667766542 2211 000000 013579999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHH
Q 043530 307 ELLRIQEMRIREEARTAIEQGGSLKKR 333 (343)
Q Consensus 307 ~~~r~~a~~l~~~~~~a~~~gg~~~~~ 333 (343)
++.++..+...+.+++....|.++..+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 341 PEKRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCHHH
Confidence 988888888888888887777665543
No 63
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=96.31 E-value=0.017 Score=54.98 Aligned_cols=83 Identities=23% Similarity=0.264 Sum_probs=59.1
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEAR 321 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~ 321 (343)
-++++||+++|+|+|+-... .....+.+.+.|..+ ...-+.++++++|.++++|++.++ ++++..+
T Consensus 324 p~~llEAma~G~PVIas~vg----g~~e~i~~~~~G~l~-------~~~~~~~~la~~I~~ll~~~~~~~---~m~~~ar 389 (407)
T cd04946 324 PVSIMEAMSFGIPVIATNVG----GTPEIVDNGGNGLLL-------SKDPTPNELVSSLSKFIDNEEEYQ---TMREKAR 389 (407)
T ss_pred cHHHHHHHHcCCCEEeCCCC----CcHHHhcCCCcEEEe-------CCCCCHHHHHHHHHHHHhCHHHHH---HHHHHHH
Confidence 56899999999999985433 344455444578777 223478999999999998876554 4555666
Q ss_pred HHHhcCCCHHHHHHHHH
Q 043530 322 TAIEQGGSLKKRLTELV 338 (343)
Q Consensus 322 ~a~~~gg~~~~~~~~~~ 338 (343)
+.+.+.-+.+...++|+
T Consensus 390 ~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 390 EKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHcCHHHhHHHhc
Confidence 66666677777777665
No 64
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=96.23 E-value=0.067 Score=50.47 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=63.6
Q ss_pred CCHHHHHHHHH--hhcccc----cCh-hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHH
Q 043530 223 MSREQLRELGD--GGFLTY----CGW-NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQ 295 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvtH----gG~-~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~ 295 (343)
.+.+++.++.. ++||.- -|+ .+++||+++|+|+|+....+ +...+.+...|..+ ....+.++
T Consensus 265 ~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l-------~~~~d~~~ 333 (380)
T PRK15484 265 QPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHL-------AEPMTSDS 333 (380)
T ss_pred CCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEE-------eCCCCHHH
Confidence 34455544433 666643 333 57789999999999976532 33344444567655 12447999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 296 IAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 296 l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++++|.+++.|++.+ ++++..++...+.-+-....+++.+.+
T Consensus 334 la~~I~~ll~d~~~~----~~~~~ar~~~~~~fsw~~~a~~~~~~l 375 (380)
T PRK15484 334 IISDINRTLADPELT----QIAEQAKDFVFSKYSWEGVTQRFEEQI 375 (380)
T ss_pred HHHHHHHHHcCHHHH----HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999988753 344444443344455555555555444
No 65
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.13 E-value=0.021 Score=47.04 Aligned_cols=64 Identities=22% Similarity=0.196 Sum_probs=46.5
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMR 315 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~ 315 (343)
+..++++||+++|+|+|+. |...+...+.+.+.|..++ .. +.++++++|.+++.+++++++..+
T Consensus 104 ~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~~~g~~~~------~~--~~~~l~~~i~~~l~~~~~~~~l~~ 167 (172)
T PF00534_consen 104 GFGLSLLEAMACGCPVIAS----DIGGNNEIINDGVNGFLFD------PN--DIEELADAIEKLLNDPELRQKLGK 167 (172)
T ss_dssp SS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTTTSEEEES------TT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeec----cccCCceeeccccceEEeC------CC--CHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4556899999999999984 4555555666667788882 22 999999999999988755554443
No 66
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.97 E-value=0.057 Score=49.08 Aligned_cols=86 Identities=21% Similarity=0.113 Sum_probs=56.2
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
|.-++++||+++|+|+|+.+. ..+...+.+.+.|...+ ..+.+++.++|.+++.+++.++...+-+.
T Consensus 287 ~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~~--------~~~~~~l~~~i~~~~~~~~~~~~~~~~~~- 353 (374)
T cd03801 287 GFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLVP--------PGDPEALAEAILRLLDDPELRRRLGEAAR- 353 (374)
T ss_pred cccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEeC--------CCCHHHHHHHHHHHHcChHHHHHHHHHHH-
Confidence 556789999999999999765 34455555567777762 33589999999999998765544333332
Q ss_pred HHHHHhcCCCHHHHHHHHHHH
Q 043530 320 ARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 320 ~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+...+.-+.+...+++++.
T Consensus 354 --~~~~~~~~~~~~~~~~~~~ 372 (374)
T cd03801 354 --ERVAERFSWDRVAARTEEV 372 (374)
T ss_pred --HHHHHhcCHHHHHHHHHHh
Confidence 1222334545555555543
No 67
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=95.94 E-value=0.05 Score=49.64 Aligned_cols=89 Identities=28% Similarity=0.275 Sum_probs=55.1
Q ss_pred hhcccccC----hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCG----WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG----~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++++.... -++++||+++|+|+|+-.. ..+...+.+ .|..++ .-+.++++++|.+++++++.
T Consensus 270 di~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~--~g~~~~--------~~~~~~l~~~i~~l~~~~~~ 335 (365)
T cd03807 270 DVFVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD--TGFLVP--------PGDPEALAEAIEALLADPAL 335 (365)
T ss_pred CEEEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc--CCEEeC--------CCCHHHHHHHHHHHHhChHH
Confidence 56664433 4789999999999998543 334444444 555552 23589999999999988643
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 310 RIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 310 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
+ +++++..++...+.-+-....+.+.+
T Consensus 336 ~---~~~~~~~~~~~~~~~s~~~~~~~~~~ 362 (365)
T cd03807 336 R---QALGEAARERIEENFSIEAMVEAYEE 362 (365)
T ss_pred H---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3 33333444433344555555555544
No 68
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.93 E-value=0.03 Score=51.97 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=63.5
Q ss_pred hhcccccChhHHHHHHHhCceEEeccC--CcchhHHHHHHH---Hhcceeeee-----ccCC-C-CcCcccHHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQ--HGDQKINADVVE---RTGMGIWVQ-----SWGW-G-GEAIMKGEQIAENIS 301 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~--~~DQ~~na~~v~---~~G~G~~l~-----~~~~-~-~~~~~t~~~l~~ai~ 301 (343)
++.++-.|..|+ |+..+|+|+++ +. ..=|..||++++ ..|..-.+. +.-. . -.+.+|++.|.+++.
T Consensus 237 Dlal~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~ 314 (347)
T PRK14089 237 EFAFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYK 314 (347)
T ss_pred hHHHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHH
Confidence 899999999999 99999999988 43 446888999998 345543331 0000 0 135799999999998
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 043530 302 EMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTEL 337 (343)
Q Consensus 302 ~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~ 337 (343)
+ ..+++.++..+.+++...+ |++.+..+.+
T Consensus 315 ~-----~~~~~~~~~~~~l~~~l~~-~a~~~~A~~i 344 (347)
T PRK14089 315 E-----MDREKFFKKSKELREYLKH-GSAKNVAKIL 344 (347)
T ss_pred H-----HHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 7 2455555555555554433 5555555443
No 69
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.90 E-value=0.046 Score=50.69 Aligned_cols=60 Identities=22% Similarity=0.195 Sum_probs=45.3
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
--++++||+++|+|+|+-+..+ +...+.+.+.|..+ + .-+.++++++|.+++.|++.+++
T Consensus 283 ~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~~------~--~~d~~~l~~~i~~l~~~~~~~~~ 342 (367)
T cd05844 283 LPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLLV------P--EGDVAALAAALGRLLADPDLRAR 342 (367)
T ss_pred CchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEEE------C--CCCHHHHHHHHHHHHcCHHHHHH
Confidence 3578999999999999876543 55555666788776 2 34679999999999998764443
No 70
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.82 E-value=0.15 Score=37.31 Aligned_cols=82 Identities=18% Similarity=0.109 Sum_probs=53.0
Q ss_pred ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhc-ceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 239 YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTG-MGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 239 HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
+|-..-+.|++++|+|+|+-+. ..... +-..| -++.. . +.+++.++|+.+++|+..+++..+-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~-~~~~~~~~~~~---------~-~~~el~~~i~~ll~~~~~~~~ia~~- 72 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLRE-IFEDGEHIITY---------N-DPEELAEKIEYLLENPEERRRIAKN- 72 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHH-HcCCCCeEEEE---------C-CHHHHHHHHHHHHCCHHHHHHHHHH-
Confidence 3445578999999999999754 22222 22234 23333 2 9999999999999998755544333
Q ss_pred HHHHHHHhcCCCHHHHHHHHH
Q 043530 318 EEARTAIEQGGSLKKRLTELV 338 (343)
Q Consensus 318 ~~~~~a~~~gg~~~~~~~~~~ 338 (343)
.++.+.+.-+....++.|+
T Consensus 73 --a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 73 --ARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred --HHHHHHHhCCHHHHHHHHH
Confidence 3333455677777777765
No 71
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=95.71 E-value=0.044 Score=50.69 Aligned_cols=78 Identities=22% Similarity=0.341 Sum_probs=58.6
Q ss_pred HHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHH
Q 043530 245 VTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN--ELLRIQEMRIREEART 322 (343)
Q Consensus 245 ~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~--~~~r~~a~~l~~~~~~ 322 (343)
+.+.+++|+|+|+++ +...+..+++.+.|+.+ + +.+++.+++.++..+ .++++|++++++.++.
T Consensus 253 ~~~ymA~G~PVI~~~----~~~~~~~V~~~~~G~~v------~----~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 253 LSLYLAAGLPVIVWS----KAAIADFIVENGLGFVV------D----SLEELPEIIDNITEEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred HHHHHHCCCCEEECC----CccHHHHHHhCCceEEe------C----CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc
Confidence 677899999999964 46677888888999998 3 567899999886432 3578999999988754
Q ss_pred HHhcCCCHHHHHHHHHHH
Q 043530 323 AIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 323 a~~~gg~~~~~~~~~~~~ 340 (343)
|.--.+++++++..
T Consensus 319 ----g~~~~~~~~~~~~~ 332 (333)
T PRK09814 319 ----GYFTKKALVDAIKE 332 (333)
T ss_pred ----chhHHHHHHHHHhc
Confidence 55555566666543
No 72
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=95.43 E-value=0.08 Score=48.51 Aligned_cols=61 Identities=15% Similarity=0.031 Sum_probs=43.1
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRI 316 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l 316 (343)
-++++||+++|+|+|+-+.. .....+.+ +.|... . .+.++++++|.+++.+++.+++..+-
T Consensus 295 ~~~~~Eama~G~PvI~~~~~----~~~~~~~~-~~~~~~------~---~~~~~~~~~i~~l~~~~~~~~~~~~~ 355 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKV----PWQELIEY-GCGWVV------D---DDVDALAAALRRALELPQRLKAMGEN 355 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCC----CHHHHhhc-CceEEe------C---CChHHHHHHHHHHHhCHHHHHHHHHH
Confidence 46889999999999996543 34444444 777766 2 23499999999999987554444333
No 73
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=95.42 E-value=0.061 Score=50.89 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=50.1
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEART 322 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~ 322 (343)
++++||+++|+|+|+-. ...+...+.+...|..+ ..-+.++++++|.+++.|++.+++ +++..++
T Consensus 315 ~~llEAmA~G~PVIas~----~~g~~e~i~~~~~G~lv--------~~~d~~~la~~i~~ll~~~~~~~~---l~~~ar~ 379 (396)
T cd03818 315 WSLLEAMACGCLVVGSD----TAPVREVITDGENGLLV--------DFFDPDALAAAVIELLDDPARRAR---LRRAARR 379 (396)
T ss_pred hHHHHHHHCCCCEEEcC----CCCchhhcccCCceEEc--------CCCCHHHHHHHHHHHHhCHHHHHH---HHHHHHH
Confidence 47899999999999854 33444444444567666 234689999999999998865444 3444444
Q ss_pred HHhcCCCHHHHHHH
Q 043530 323 AIEQGGSLKKRLTE 336 (343)
Q Consensus 323 a~~~gg~~~~~~~~ 336 (343)
...+.-+-...+++
T Consensus 380 ~~~~~fs~~~~~~~ 393 (396)
T cd03818 380 TALRYDLLSVCLPR 393 (396)
T ss_pred HHHHhccHHHHHHH
Confidence 43333333333333
No 74
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.42 E-value=0.11 Score=48.67 Aligned_cols=85 Identities=20% Similarity=0.190 Sum_probs=53.9
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
|--++++||+++|+|+|+-...+ +...+.+-..|..+ ..-+.++++++|.+++.+++.++ ++++.
T Consensus 284 g~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~--------~~~d~~~la~~i~~l~~~~~~~~---~~~~~ 348 (374)
T TIGR03088 284 GISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALV--------PPGDAVALARALQPYVSDPAARR---AHGAA 348 (374)
T ss_pred cCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEe--------CCCCHHHHHHHHHHHHhCHHHHH---HHHHH
Confidence 44568999999999999966533 33344444567666 23467899999999998876543 23333
Q ss_pred HHHHHhcCCCHHHHHHHHHH
Q 043530 320 ARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 320 ~~~a~~~gg~~~~~~~~~~~ 339 (343)
.++...+.=+.+...+++.+
T Consensus 349 a~~~~~~~fs~~~~~~~~~~ 368 (374)
T TIGR03088 349 GRARAEQQFSINAMVAAYAG 368 (374)
T ss_pred HHHHHHHhCCHHHHHHHHHH
Confidence 33333334454555555443
No 75
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=95.33 E-value=0.15 Score=46.47 Aligned_cols=74 Identities=20% Similarity=0.187 Sum_probs=50.6
Q ss_pred CHHHHHHHHH--hhcc----cccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 224 SREQLRELGD--GGFL----TYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 224 ~~~~~~~l~~--~~fv----tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
+.+++.++.. ++++ +-|.-++++||+++|+|+|+-+..+ ....+.+.+.|... ..-+.+++.
T Consensus 268 ~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~--------~~~~~~~l~ 335 (377)
T cd03798 268 PHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLV--------PPGDPEALA 335 (377)
T ss_pred CHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEE--------CCCCHHHHH
Confidence 4444444443 4444 2355678899999999999866433 34445555667666 244789999
Q ss_pred HHHHHHhCCHHH
Q 043530 298 ENISEMMGNELL 309 (343)
Q Consensus 298 ~ai~~vl~~~~~ 309 (343)
++|.+++.++..
T Consensus 336 ~~i~~~~~~~~~ 347 (377)
T cd03798 336 EAILRLLADPWL 347 (377)
T ss_pred HHHHHHhcCcHH
Confidence 999999998774
No 76
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=95.25 E-value=0.3 Score=45.70 Aligned_cols=112 Identities=21% Similarity=0.218 Sum_probs=65.8
Q ss_pred CceeEEeccCCccCCHHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeecc
Q 043530 210 GSVVDVSFGSRTAMSREQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSW 283 (343)
Q Consensus 210 ~~vVyvs~GS~~~~~~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~ 283 (343)
+.+.++.+.. .+.+++.++.. ++|+.- |-..+++||+++|+|+|+-...+ ....+.+-..|...
T Consensus 252 ~~v~~~~~~~---~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~--- 321 (372)
T cd03792 252 PDIHVLTLPP---VSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLV--- 321 (372)
T ss_pred CCeEEEecCC---CCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEe---
Confidence 3466664432 35566666544 666643 23458999999999999965432 23334444567655
Q ss_pred CCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 284 GWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 284 ~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
+ +.++++++|.+++.+++.++...+ ..++...+.-+-...++++++.+
T Consensus 322 ---~----~~~~~a~~i~~ll~~~~~~~~~~~---~a~~~~~~~~s~~~~~~~~~~~~ 369 (372)
T cd03792 322 ---D----TVEEAAVRILYLLRDPELRRKMGA---NAREHVRENFLITRHLKDYLYLI 369 (372)
T ss_pred ---C----CcHHHHHHHHHHHcCHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHH
Confidence 2 356788899999988766543332 22222223345555555555443
No 77
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.19 E-value=0.14 Score=48.53 Aligned_cols=90 Identities=21% Similarity=0.198 Sum_probs=55.5
Q ss_pred hhcc--cc--cCh-hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHH
Q 043530 234 GGFL--TY--CGW-NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNEL 308 (343)
Q Consensus 234 ~~fv--tH--gG~-~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~ 308 (343)
++|| ++ .|. +.++||+++|+|+|+-+...+.. .+..|.|+.+ . -+.++++++|.++++|++
T Consensus 299 dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv------~---~~~~~la~ai~~ll~~~~ 364 (397)
T TIGR03087 299 AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLV------A---ADPADFAAAILALLANPA 364 (397)
T ss_pred CEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEe------C---CCHHHHHHHHHHHHcCHH
Confidence 5565 22 354 46999999999999987543211 1223567665 1 478999999999999876
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 309 LRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 309 ~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
.+++ +++..++...+.-+-...++++.+.
T Consensus 365 ~~~~---~~~~ar~~v~~~fsw~~~~~~~~~~ 393 (397)
T TIGR03087 365 EREE---LGQAARRRVLQHYHWPRNLARLDAL 393 (397)
T ss_pred HHHH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5443 3333333333345545555555443
No 78
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=95.18 E-value=0.12 Score=49.68 Aligned_cols=92 Identities=13% Similarity=0.169 Sum_probs=59.0
Q ss_pred hhccccc---C-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYC---G-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHg---G-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++||... | -.+++||+++|+|+|+-... .+...+.+...|+.++ .-+.++++++|.++++|++.
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~~~~G~lv~--------~~d~~~la~~i~~ll~~~~~ 409 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIANCRNGLLVD--------VLDLEAIASALEDALSDSSQ 409 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcCCCcEEEeC--------CCCHHHHHHHHHHHHhCHHH
Confidence 5676543 3 45899999999999997543 3334444445677662 34689999999999998764
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 310 RIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 310 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+ +++++..++...+.-+-...++++.+.
T Consensus 410 ~---~~~~~~a~~~~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 410 W---QLWSRNGIEGVRRHYSWDAHVEKYLRI 437 (439)
T ss_pred H---HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3 445555555444445544555555443
No 79
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.12 E-value=0.11 Score=47.81 Aligned_cols=64 Identities=22% Similarity=0.190 Sum_probs=45.4
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIRE 318 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~ 318 (343)
++++||+++|+|+|+.+..+.+... .+.+.|..++ .-+.++++++|.+++.|++.+++..+-+.
T Consensus 314 ~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~~~g~~~~--------~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 377 (394)
T cd03794 314 SKLFEYMAAGKPVLASVDGESAELV----EEAGAGLVVP--------PGDPEALAAAILELLDDPEERAEMGENGR 377 (394)
T ss_pred hHHHHHHHCCCcEEEecCCCchhhh----ccCCcceEeC--------CCCHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 3479999999999998876654433 2336676662 23789999999999988776655444333
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.10 E-value=0.15 Score=46.88 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=52.3
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEA 320 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~ 320 (343)
..++++||+++|+|+|+-+..+ ...+.+.+.|..++ .-+.++++++|.+++++++.+.+ +++..
T Consensus 282 ~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~--------~~d~~~~~~~l~~l~~~~~~~~~---~~~~~ 345 (366)
T cd03822 282 QSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVP--------PGDPAALAEAIRRLLADPELAQA---LRARA 345 (366)
T ss_pred cchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEc--------CCCHHHHHHHHHHHHcChHHHHH---HHHHH
Confidence 3457889999999999977544 23344456676662 23589999999999998655443 33344
Q ss_pred HHHHhcCCCHHHHHHHHHH
Q 043530 321 RTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 321 ~~a~~~gg~~~~~~~~~~~ 339 (343)
++...+ -+.+...+++.+
T Consensus 346 ~~~~~~-~s~~~~~~~~~~ 363 (366)
T cd03822 346 REYARA-MSWERVAERYLR 363 (366)
T ss_pred HHHHhh-CCHHHHHHHHHH
Confidence 433333 444444454444
No 81
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=95.08 E-value=0.17 Score=47.46 Aligned_cols=83 Identities=22% Similarity=0.099 Sum_probs=50.7
Q ss_pred CHHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 224 SREQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
+.+++.++.. ++|+.= +...+++||+++|+|+|+-.. ..+...+.+.+.|..++... ....-..+++.
T Consensus 270 ~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~~~G~~~~~~~--~~~~~~~~~l~ 343 (388)
T TIGR02149 270 PKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDGETGFLVPPDN--SDADGFQAELA 343 (388)
T ss_pred CHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCCCceEEcCCCC--CcccchHHHHH
Confidence 3444444433 665532 334577999999999999654 33455555556787773210 01112238999
Q ss_pred HHHHHHhCCHHHHHH
Q 043530 298 ENISEMMGNELLRIQ 312 (343)
Q Consensus 298 ~ai~~vl~~~~~r~~ 312 (343)
++|.+++.|++-+++
T Consensus 344 ~~i~~l~~~~~~~~~ 358 (388)
T TIGR02149 344 KAINILLADPELAKK 358 (388)
T ss_pred HHHHHHHhCHHHHHH
Confidence 999999988765443
No 82
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.05 E-value=0.21 Score=47.64 Aligned_cols=84 Identities=18% Similarity=0.187 Sum_probs=54.9
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLRIQEMRIREEAR 321 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r~~a~~l~~~~~ 321 (343)
++++||+++|+|+|+-...+ ....+.+-..|..++ .-+.++++++|.++++ |++.++ ++++..+
T Consensus 319 ~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~lv~--------~~d~~~la~ai~~l~~~d~~~~~---~~~~~ar 383 (406)
T PRK15427 319 VALMEAMAVGIPVVSTLHSG----IPELVEADKSGWLVP--------ENDAQALAQRLAAFSQLDTDELA---PVVKRAR 383 (406)
T ss_pred HHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEEeC--------CCCHHHHHHHHHHHHhCCHHHHH---HHHHHHH
Confidence 57899999999999975433 333344445677662 3468999999999998 876443 3334444
Q ss_pred HHHhcCCCHHHHHHHHHHHH
Q 043530 322 TAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 322 ~a~~~gg~~~~~~~~~~~~~ 341 (343)
+.+.+.=+.+...+++.+.+
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~ 403 (406)
T PRK15427 384 EKVETDFNQQVINRELASLL 403 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHH
Confidence 44444455566666666544
No 83
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.01 E-value=0.13 Score=47.30 Aligned_cols=61 Identities=18% Similarity=0.053 Sum_probs=43.4
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
..+++||+++|+|+|+-...+.+..... +.+.|... ..-+.++++++|.++++|++.+++.
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~~~--------~~~d~~~~~~~i~~l~~~~~~~~~~ 339 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGLVV--------PPGDPAALAEAIRRLLEDPELRERL 339 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhh---CCCceEEe--------CCCCHHHHHHHHHHHHHCHHHHHHH
Confidence 3478999999999999765554433322 24677666 2347899999999999988654433
No 84
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.52 E-value=0.27 Score=45.61 Aligned_cols=61 Identities=23% Similarity=0.160 Sum_probs=43.6
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
|.-.+++||+++|+|+|+-.. ......+.+-..|..++ .-+.++++++|.+++.+++.+++
T Consensus 282 ~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~~~~G~~~~--------~~~~~~l~~~i~~l~~~~~~~~~ 342 (371)
T cd04962 282 SFGLAALEAMACGVPVVASNA----GGIPEVVKHGETGFLVD--------VGDVEAMAEYALSLLEDDELWQE 342 (371)
T ss_pred CCccHHHHHHHcCCCEEEeCC----CCchhhhcCCCceEEcC--------CCCHHHHHHHHHHHHhCHHHHHH
Confidence 445689999999999999543 33444455545676652 23689999999999988765444
No 85
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.44 E-value=0.27 Score=47.87 Aligned_cols=84 Identities=20% Similarity=0.174 Sum_probs=52.3
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh------cceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT------GMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~------G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
|--++++||+++|+|+|+- |.......+.+. ..|..+ ..-+.++++++|.+++.|++.+++.
T Consensus 382 g~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv--------~~~d~~~la~ai~~ll~~~~~~~~~ 449 (475)
T cd03813 382 GQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVV--------PPADPEALARAILRLLKDPELRRAM 449 (475)
T ss_pred cCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEE--------CCCCHHHHHHHHHHHhcCHHHHHHH
Confidence 3356899999999999994 333444444442 266666 2347899999999999988765544
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHH
Q 043530 314 MRIREEARTAIEQGGSLKKRLTELV 338 (343)
Q Consensus 314 ~~l~~~~~~a~~~gg~~~~~~~~~~ 338 (343)
.+ ..++.+.+--+.+..++++.
T Consensus 450 ~~---~a~~~v~~~~s~~~~~~~y~ 471 (475)
T cd03813 450 GE---AGRKRVERYYTLERMIDSYR 471 (475)
T ss_pred HH---HHHHHHHHhCCHHHHHHHHH
Confidence 33 33333333344344444443
No 86
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.32 E-value=0.17 Score=46.50 Aligned_cols=59 Identities=24% Similarity=0.254 Sum_probs=42.0
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
|.-++++||+++|+|+|+.+..+ ....+.+...|..++ .-+.++++++|.+++.++..+
T Consensus 273 ~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~--------~~~~~~l~~~i~~~~~~~~~~ 331 (355)
T cd03799 273 GLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVP--------PGDPEALADAIERLLDDPELR 331 (355)
T ss_pred CccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeC--------CCCHHHHHHHHHHHHhCHHHH
Confidence 34578999999999999976432 222333334777662 237899999999999887643
No 87
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=94.09 E-value=0.071 Score=49.64 Aligned_cols=85 Identities=21% Similarity=0.172 Sum_probs=58.1
Q ss_pred CceeEEeccCCccCCHHHHHHHHH--hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCC
Q 043530 210 GSVVDVSFGSRTAMSREQLRELGD--GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGG 287 (343)
Q Consensus 210 ~~vVyvs~GS~~~~~~~~~~~l~~--~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~ 287 (343)
+.+.+++++. .+++..+.. ++||+-.| +.+.||++.|+|+|+++.. |. +..+.+.|+++.+ .
T Consensus 258 ~~v~~~~~~~-----~~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~------~ 321 (363)
T cd03786 258 PNVLLISPLG-----YLYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLV------G 321 (363)
T ss_pred CCEEEECCcC-----HHHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEec------C
Confidence 3465665542 234444333 99999998 6778999999999998743 22 3345566777665 1
Q ss_pred cCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 288 EAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
-+.++|.++|.++++++..+++.
T Consensus 322 ---~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 322 ---TDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred ---CCHHHHHHHHHHHhcCchhhhcC
Confidence 14899999999999887655443
No 88
>PRK10307 putative glycosyl transferase; Provisional
Probab=93.95 E-value=0.56 Score=44.54 Aligned_cols=83 Identities=22% Similarity=0.290 Sum_probs=50.7
Q ss_pred HHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 043530 244 SVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTA 323 (343)
Q Consensus 244 s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a 323 (343)
.+.|++++|+|+|+-...+.. ....+ + +.|+.+ + .-+.++++++|.++++|++.+++ +++..++.
T Consensus 323 kl~eama~G~PVi~s~~~g~~--~~~~i-~-~~G~~~------~--~~d~~~la~~i~~l~~~~~~~~~---~~~~a~~~ 387 (412)
T PRK10307 323 KLTNMLASGRNVVATAEPGTE--LGQLV-E-GIGVCV------E--PESVEALVAAIAALARQALLRPK---LGTVAREY 387 (412)
T ss_pred HHHHHHHcCCCEEEEeCCCch--HHHHH-h-CCcEEe------C--CCCHHHHHHHHHHHHhCHHHHHH---HHHHHHHH
Confidence 468999999999998654321 11222 2 678777 2 34689999999999988755433 33333333
Q ss_pred HhcCCCHHHHHHHHHHHH
Q 043530 324 IEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 324 ~~~gg~~~~~~~~~~~~~ 341 (343)
..+.-+.+...+++++.+
T Consensus 388 ~~~~fs~~~~~~~~~~~~ 405 (412)
T PRK10307 388 AERTLDKENVLRQFIADI 405 (412)
T ss_pred HHHHcCHHHHHHHHHHHH
Confidence 333344455555554443
No 89
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.91 E-value=0.44 Score=45.02 Aligned_cols=61 Identities=18% Similarity=0.111 Sum_probs=43.6
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEM 314 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~ 314 (343)
..+++||+++|+|+|+....+ ....+.+...|..++ .-+.++++++|.+++.+++.+++..
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~--------~~d~~~la~~i~~~l~~~~~~~~~~ 376 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVD--------GHDPADWADALARLLDDPRTRIRMG 376 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECC--------CCCHHHHHHHHHHHHhCHHHHHHHH
Confidence 458999999999999965432 333444556676662 3478999999999998876554443
No 90
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=93.89 E-value=0.12 Score=47.69 Aligned_cols=67 Identities=10% Similarity=-0.058 Sum_probs=46.9
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
|--++++||+++|+|+|+-...+ ....+.+ +.|... ..-+.++++++|.++++|++.+++....+..
T Consensus 278 ~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~-~~~~~~--------~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 278 GLPLVLIEAQASGLPCILSDTIT----KEVDLTD-LVKFLS--------LDESPEIWAEEILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred CCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc-CccEEe--------CCCCHHHHHHHHHHHHhCcchhhhhhhhhhc
Confidence 44678999999999999865444 3333444 555554 1235899999999999998877666544443
No 91
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=93.74 E-value=0.35 Score=46.24 Aligned_cols=69 Identities=22% Similarity=0.213 Sum_probs=47.6
Q ss_pred CHHHHHHHHH--hhccc-c-----cC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHH
Q 043530 224 SREQLRELGD--GGFLT-Y-----CG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGE 294 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvt-H-----gG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~ 294 (343)
+.+++.++.. ++++. + -| -+.++||+++|+|+|+... ......+++.+.|..+ + +.+
T Consensus 304 ~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~~~G~lv------~----d~~ 369 (415)
T cd03816 304 SAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHGENGLVF------G----DSE 369 (415)
T ss_pred CHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCCCCEEEE------C----CHH
Confidence 4455544433 66663 1 12 3468999999999999543 3444555566788776 2 689
Q ss_pred HHHHHHHHHhCC
Q 043530 295 QIAENISEMMGN 306 (343)
Q Consensus 295 ~l~~ai~~vl~~ 306 (343)
+++++|.++++|
T Consensus 370 ~la~~i~~ll~~ 381 (415)
T cd03816 370 ELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHHHHHhc
Confidence 999999999988
No 92
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=93.48 E-value=0.33 Score=45.21 Aligned_cols=60 Identities=22% Similarity=0.203 Sum_probs=42.1
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
|...+++||+++|+|+|+..... .....+.+...|..+ ..-+.++++++|.+++.|++.+
T Consensus 290 g~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv--------~~~d~~~la~~i~~ll~~~~~~ 349 (372)
T cd04949 290 GFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLV--------PKGDIEALAEAIIELLNDPKLL 349 (372)
T ss_pred ccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEe--------CCCcHHHHHHHHHHHHcCHHHH
Confidence 34568999999999999964321 123334444567666 2357999999999999987533
No 93
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=93.42 E-value=0.5 Score=43.41 Aligned_cols=80 Identities=24% Similarity=0.140 Sum_probs=49.3
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh-CCHHHHHHHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM-GNELLRIQEMRIREEA 320 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl-~~~~~r~~a~~l~~~~ 320 (343)
-++++||+++|+|+|+- |...+...+.+ .|..+ ..-+.++++++|.+++ .++.+++...+-++.+
T Consensus 276 ~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~--~g~~~--------~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 341 (360)
T cd04951 276 GLVVAEAMACELPVVAT----DAGGVREVVGD--SGLIV--------PISDPEALANKIDEILKMSGEERDIIGARRERI 341 (360)
T ss_pred ChHHHHHHHcCCCEEEe----cCCChhhEecC--CceEe--------CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 56789999999999984 44444444444 34334 1347889999999998 4666665444332222
Q ss_pred HHHHhcCCCHHHHHHHHHH
Q 043530 321 RTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 321 ~~a~~~gg~~~~~~~~~~~ 339 (343)
.+.-+.+...+++.+
T Consensus 342 ----~~~~s~~~~~~~~~~ 356 (360)
T cd04951 342 ----VKKFSINSIVQQWLT 356 (360)
T ss_pred ----HHhcCHHHHHHHHHH
Confidence 333444444444443
No 94
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=93.32 E-value=0.2 Score=45.93 Aligned_cols=64 Identities=19% Similarity=0.137 Sum_probs=42.8
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIRE 318 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~ 318 (343)
..++++||+++|+|+|+-...+ ....+. ..|..+ ..-+.+++.++|.+++.|++.+.+..+-+.
T Consensus 285 ~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~--------~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 285 FGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYF--------DPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred CCCCHHHHhcCCCcEEecCCCC----ccceec--Cceeee--------CCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3457999999999999955422 111121 224334 123789999999999999887776655444
No 95
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=93.20 E-value=0.43 Score=44.49 Aligned_cols=55 Identities=13% Similarity=0.174 Sum_probs=40.1
Q ss_pred hhHHHHHHHhCceEEecc-CCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHH
Q 043530 242 WNSVTKAMWNGVQVLAWP-QHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNEL 308 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P-~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~ 308 (343)
-+++.||+++|+|+|+.- ..+ ....+.+...|..+ ..-+.++++++|.+++.|++
T Consensus 271 ~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv--------~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 271 PMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELY--------TPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred ChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEE--------CCCCHHHHHHHHHHHHhCcc
Confidence 578999999999999865 322 22234444567666 23489999999999998776
No 96
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=92.30 E-value=0.53 Score=44.12 Aligned_cols=56 Identities=21% Similarity=0.219 Sum_probs=40.2
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRI 311 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~ 311 (343)
.+++||+++|+|+|+.-..+ ....+.+.+.|... . .+.++++++|.+++++++.++
T Consensus 314 ~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~------~---~~~~~~a~~i~~l~~~~~~~~ 369 (392)
T cd03805 314 IVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLC------E---PTPEEFAEAMLKLANDPDLAD 369 (392)
T ss_pred chHHHHHHcCCCEEEECCCC----cHHHhccCCceEEe------C---CCHHHHHHHHHHHHhChHHHH
Confidence 57899999999999964432 33344444567665 1 268999999999999876443
No 97
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=92.01 E-value=0.21 Score=46.14 Aligned_cols=80 Identities=25% Similarity=0.244 Sum_probs=50.1
Q ss_pred CHHHHHHHHH--hhccc--ccCh-hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHH
Q 043530 224 SREQLRELGD--GGFLT--YCGW-NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAE 298 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvt--HgG~-~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ 298 (343)
+.+++.++.. ++++. .-|+ .+++||+++|+|+|+....+ ....+.+.+.|..++ .-+.+++++
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~--------~~~~~~la~ 318 (351)
T cd03804 251 SDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFE--------EQTVESLAA 318 (351)
T ss_pred CHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeC--------CCCHHHHHH
Confidence 4444444433 55552 2333 46789999999999976433 233344446777762 346888999
Q ss_pred HHHHHhCCH-HHHHHHHH
Q 043530 299 NISEMMGNE-LLRIQEMR 315 (343)
Q Consensus 299 ai~~vl~~~-~~r~~a~~ 315 (343)
+|.++++|+ ..++++++
T Consensus 319 ~i~~l~~~~~~~~~~~~~ 336 (351)
T cd03804 319 AVERFEKNEDFDPQAIRA 336 (351)
T ss_pred HHHHHHhCcccCHHHHHH
Confidence 999999887 44444333
No 98
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=91.94 E-value=0.29 Score=47.61 Aligned_cols=45 Identities=31% Similarity=0.493 Sum_probs=32.2
Q ss_pred hhccc---ccChhHHHHHHHhCceEEeccCCcchhH--HHHH-HHHhcceeee
Q 043530 234 GGFLT---YCGWNSVTKAMWNGVQVLAWPQHGDQKI--NADV-VERTGMGIWV 280 (343)
Q Consensus 234 ~~fvt---HgG~~s~~eal~~GVP~l~~P~~~DQ~~--na~~-v~~~G~G~~l 280 (343)
++|+- -||+.|+.|+|+.|||+|.++ ++||- |+.- +..+|+--.+
T Consensus 510 DlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 510 DLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred heeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 55543 499999999999999999987 77774 3333 3334666555
No 99
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=91.69 E-value=1.4 Score=46.75 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=47.7
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++||.- +=-.+++||+++|+|+|+-...+ ....+....-|+.+ ..-+.++|+++|.+++.|++.
T Consensus 573 DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlLV--------dP~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 573 GVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLLV--------DPHDQQAIADALLKLVADKQL 640 (1050)
T ss_pred CeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEEE--------CCCCHHHHHHHHHHHhhCHHH
Confidence 366653 22458899999999999976543 22223333457766 234788999999999998876
Q ss_pred HHHHHHH
Q 043530 310 RIQEMRI 316 (343)
Q Consensus 310 r~~a~~l 316 (343)
+++..+-
T Consensus 641 r~~m~~~ 647 (1050)
T TIGR02468 641 WAECRQN 647 (1050)
T ss_pred HHHHHHH
Confidence 5554333
No 100
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=91.36 E-value=0.98 Score=41.44 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=40.0
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLRI 311 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r~ 311 (343)
-++++||+++|+|+|+.-.. .+...+.+.+.|..++ .-+.++++++|.+++. +++.++
T Consensus 278 ~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~~~g~~~~--------~~~~~~l~~~i~~~~~~~~~~~~ 336 (355)
T cd03819 278 GRTAVEAQAMGRPVIASDHG----GARETVRPGETGLLVP--------PGDAEALAQALDQILSLLPEGRA 336 (355)
T ss_pred chHHHHHHhcCCCEEEcCCC----CcHHHHhCCCceEEeC--------CCCHHHHHHHHHHHHhhCHHHHH
Confidence 46899999999999986533 3344444445777762 3488999999976654 555443
No 101
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=91.35 E-value=0.89 Score=44.63 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=37.2
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCccc----HHHHHHHHHHHhCC
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMK----GEQIAENISEMMGN 306 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t----~~~l~~ai~~vl~~ 306 (343)
-..+++||+++|+|+|+.-..+ .+...+++-.-|..++. ....-+ .++++++|.+++.+
T Consensus 405 fgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~----~~~~~d~~~~~~~la~~I~~ll~~ 467 (500)
T TIGR02918 405 FGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPI----DEEEDDEDQIITALAEKIVEYFNS 467 (500)
T ss_pred ccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeC----CccccchhHHHHHHHHHHHHHhCh
Confidence 3468899999999999965421 12333333345766621 011112 78899999999954
No 102
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=91.12 E-value=0.86 Score=41.91 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=46.6
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEART 322 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~ 322 (343)
++++||+++|+|+|+-...+. ...+.. -|... .. .+.++++|.+++++++.++ ++++..++
T Consensus 283 ~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~------~~----~~~l~~~i~~l~~~~~~~~---~~~~~~~~ 343 (363)
T cd04955 283 PSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYF------KV----GDDLASLLEELEADPEEVS---AMAKAARE 343 (363)
T ss_pred hHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEe------cC----chHHHHHHHHHHhCHHHHH---HHHHHHHH
Confidence 578999999999998754321 111111 23223 11 1129999999998875443 34455554
Q ss_pred HHhcCCCHHHHHHHHHHH
Q 043530 323 AIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 323 a~~~gg~~~~~~~~~~~~ 340 (343)
...+.-+.....+++++.
T Consensus 344 ~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 344 RIREKYTWEKIADQYEEL 361 (363)
T ss_pred HHHHhCCHHHHHHHHHHH
Confidence 444445556666666554
No 103
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=90.52 E-value=0.89 Score=44.79 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=29.5
Q ss_pred cChhHHHHHHHhCceEEeccCCcchhHH-HHHHHHhcceeee
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHGDQKIN-ADVVERTGMGIWV 280 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~DQ~~n-a~~v~~~G~G~~l 280 (343)
-|+.|.+|.||.|||||.+|.-.--... +..+...|+|-.+
T Consensus 846 nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli 887 (966)
T KOG4626|consen 846 NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI 887 (966)
T ss_pred CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH
Confidence 4788999999999999999964432333 3345556888655
No 104
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=90.15 E-value=3 Score=39.97 Aligned_cols=86 Identities=12% Similarity=0.138 Sum_probs=57.9
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC-HHHHHHHHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN-ELLRIQEMRIREEA 320 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~-~~~r~~a~~l~~~~ 320 (343)
+-++.-|+..|||.++++. |..... .+.+.|..-.+- +...++.++|.+.+.+++.+ +++++..++.-+..
T Consensus 336 lHa~I~a~~~gvP~i~i~Y--~~K~~~-~~~~lg~~~~~~-----~~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 336 LHSAIISMNFGTPAIAINY--EHKSAG-IMQQLGLPEMAI-----DIRHLLDGSLQAMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred chHHHHHHHcCCCEEEeee--hHHHHH-HHHHcCCccEEe-----chhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4577889999999999986 444333 346778775531 46788999999999999986 45565555444444
Q ss_pred HHHHhcCCCHHHHHHHHHHHH
Q 043530 321 RTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 321 ~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++. +.+-..++++.+
T Consensus 408 r~~------~~~~~~~~~~~~ 422 (426)
T PRK10017 408 RQT------GMQMVQSVLERI 422 (426)
T ss_pred HHH------HHHHHHHHHHHh
Confidence 432 245555666555
No 105
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=89.87 E-value=2.3 Score=40.20 Aligned_cols=51 Identities=18% Similarity=0.144 Sum_probs=35.1
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE 307 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~ 307 (343)
.+++||+++|+|+|+-+..+- ...+ ..|.+... ..+.+++++++.+++.+.
T Consensus 284 ~~~~EAma~G~PVI~s~~gg~----~e~i-~~~~~~~~---------~~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 284 IAIVEAASCGLLVVSTRVGGI----PEVL-PPDMILLA---------EPDVESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHcCCCEEECCCCCc----hhhe-eCCceeec---------CCCHHHHHHHHHHHHhCh
Confidence 489999999999999776432 2222 23434222 226899999999999753
No 106
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=89.85 E-value=1.3 Score=45.15 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=47.9
Q ss_pred hhccc---ccC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC----
Q 043530 234 GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG---- 305 (343)
Q Consensus 234 ~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~---- 305 (343)
++||. +.| -++++||+++|+|+|+-... .+...+.+-..|+.+ ..+..+.+++.+++.+++.
T Consensus 593 Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg~~GlLv------~~~d~~~~~La~aL~~ll~~l~~ 662 (694)
T PRK15179 593 NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEGVTGLTL------PADTVTAPDVAEALARIHDMCAA 662 (694)
T ss_pred CEEEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCCCCEEEe------CCCCCChHHHHHHHHHHHhChhc
Confidence 55553 445 56788999999999997643 233344444568777 4455666777777766654
Q ss_pred CHHHHHHHHHHH
Q 043530 306 NELLRIQEMRIR 317 (343)
Q Consensus 306 ~~~~r~~a~~l~ 317 (343)
++.+++++++..
T Consensus 663 ~~~l~~~ar~~a 674 (694)
T PRK15179 663 DPGIARKAADWA 674 (694)
T ss_pred cHHHHHHHHHHH
Confidence 667776655443
No 107
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=89.68 E-value=0.23 Score=38.92 Aligned_cols=51 Identities=29% Similarity=0.392 Sum_probs=32.0
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
-+.+.|++++|+|+|+.+. ......+..+.|..+ .-+.+++.++|+++++|
T Consensus 85 ~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~---------~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 85 PNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLV---------ANDPEELAEAIERLLND 135 (135)
T ss_dssp -HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE----------TT-HHHHHHHHHHHHH-
T ss_pred cHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEE---------CCCHHHHHHHHHHHhcC
Confidence 4889999999999999765 112223335777655 34899999999999854
No 108
>PHA01630 putative group 1 glycosyl transferase
Probab=89.10 E-value=3.1 Score=38.46 Aligned_cols=105 Identities=11% Similarity=0.010 Sum_probs=56.0
Q ss_pred CHHHHHHHHH--hhccc---ccC-hhHHHHHHHhCceEEeccCCc--chhHHH---HHHHH-----------hcceeeee
Q 043530 224 SREQLRELGD--GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHG--DQKINA---DVVER-----------TGMGIWVQ 281 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~--DQ~~na---~~v~~-----------~G~G~~l~ 281 (343)
+.+++.++.. ++|+. ..| -.+++||+++|+|+|+.-..+ |.-.+. ..+.. .++|..+
T Consensus 199 ~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v- 277 (331)
T PHA01630 199 PDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL- 277 (331)
T ss_pred CHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc-
Confidence 3444444433 55552 223 567899999999999976433 221111 00000 1233333
Q ss_pred ccCCCCcCcccHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 282 SWGWGGEAIMKGEQIAENISEMMGN---ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 282 ~~~~~~~~~~t~~~l~~ai~~vl~~---~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
..+.+++.+++.+++.| ++++++.+.-+...+ +.-+-....+++.+.+
T Consensus 278 --------~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~----~~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 278 --------DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYR----ENYSYNAIAKMWEKIL 328 (331)
T ss_pred --------CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHH
Confidence 23678888888898876 455555444433332 3355555555555443
No 109
>PHA01633 putative glycosyl transferase group 1
Probab=89.07 E-value=1.2 Score=41.30 Aligned_cols=56 Identities=16% Similarity=0.028 Sum_probs=37.2
Q ss_pred hhHHHHHHHhCceEEeccC------Ccch------hHHHHHHH--HhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 242 WNSVTKAMWNGVQVLAWPQ------HGDQ------KINADVVE--RTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~------~~DQ------~~na~~v~--~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
.++++||+++|+|+|+--. .+|+ .++..... +.|.|..+ ...++++++++|.+++.
T Consensus 237 GlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~--------~~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 237 GMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKI--------HKFQIEDMANAIILAFE 306 (335)
T ss_pred CHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeee--------cCCCHHHHHHHHHHHHh
Confidence 4578899999999998632 3332 22222222 23566555 35799999999999954
No 110
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=89.01 E-value=3.2 Score=42.81 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=41.6
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh----CCHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM----GNELLRIQ 312 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl----~~~~~r~~ 312 (343)
..+++||+++|+|+|+--.. .....+.+-.-|..++ .-+.++++++|.+++ .|++.+++
T Consensus 657 GLvvLEAMAcGlPVVAT~~G----G~~EiV~dg~tGfLVd--------p~D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 657 GLTVLEAMTCGLPTFATRFG----GPLEIIQDGVSGFHID--------PYHGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred CHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEEEeC--------CCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 45889999999999995443 3445555556687772 336788999998876 57665443
No 111
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=87.55 E-value=2.4 Score=38.45 Aligned_cols=51 Identities=24% Similarity=0.225 Sum_probs=35.6
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
..+++||+++|+|+|+-...+ +...+.+...|... +. .++++++|.+++..
T Consensus 258 ~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~------~~----~~~l~~~l~~l~~~ 308 (335)
T cd03802 258 GLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLV------DS----VEELAAAVARADRL 308 (335)
T ss_pred chHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEe------CC----HHHHHHHHHHHhcc
Confidence 357999999999999876532 22233333367666 22 99999999998754
No 112
>PLN00142 sucrose synthase
Probab=87.26 E-value=5 Score=41.60 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=43.0
Q ss_pred hhcccc---cCh-hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHH----hC
Q 043530 234 GGFLTY---CGW-NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEM----MG 305 (343)
Q Consensus 234 ~~fvtH---gG~-~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~v----l~ 305 (343)
++||.= =|+ .+++||+++|+|+|+-... .....+++-.-|..++ .-..++++++|.++ +.
T Consensus 668 DVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV~dG~tG~LV~--------P~D~eaLA~aI~~lLekLl~ 735 (815)
T PLN00142 668 GAFVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEIIVDGVSGFHID--------PYHGDEAANKIADFFEKCKE 735 (815)
T ss_pred CEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEEEeC--------CCCHHHHHHHHHHHHHHhcC
Confidence 566642 343 4889999999999996543 3444444445687772 23577777777654 46
Q ss_pred CHHHHHH
Q 043530 306 NELLRIQ 312 (343)
Q Consensus 306 ~~~~r~~ 312 (343)
|++.+++
T Consensus 736 Dp~lr~~ 742 (815)
T PLN00142 736 DPSYWNK 742 (815)
T ss_pred CHHHHHH
Confidence 7765544
No 113
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=87.25 E-value=4.3 Score=40.41 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=59.0
Q ss_pred hhcccccChhHHHHHHHhCceEEecc-CCcchhHHHHHHHHh---c-------ceeeeeccCCCC-cCcccHHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWP-QHGDQKINADVVERT---G-------MGIWVQSWGWGG-EAIMKGEQIAENIS 301 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P-~~~DQ~~na~~v~~~---G-------~G~~l~~~~~~~-~~~~t~~~l~~ai~ 301 (343)
++.+.-+|- -|+|+..+|+||++.= ...=-...++++.+. = +|..+-+ .... .+.+|+++|++++
T Consensus 490 D~aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvP-EllqgQ~~~tpe~La~~l- 566 (608)
T PRK01021 490 DCALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFP-EFIGGKKDFQPEEVAAAL- 566 (608)
T ss_pred CeeeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcch-hhcCCcccCCHHHHHHHH-
Confidence 555555554 4679999999999853 222334456666551 1 1222211 0001 3578999999997
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHHhcCCC
Q 043530 302 EMMGNELLRIQEMRIREEARTAIEQGGS 329 (343)
Q Consensus 302 ~vl~~~~~r~~a~~l~~~~~~a~~~gg~ 329 (343)
++|.|++++++.++--+++++...+|-.
T Consensus 567 ~lL~d~~~r~~~~~~l~~lr~~Lg~~~~ 594 (608)
T PRK01021 567 DILKTSQSKEKQKDACRDLYQAMNESAS 594 (608)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8888988888877777777777655544
No 114
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=85.84 E-value=5.1 Score=39.70 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=30.5
Q ss_pred hhccc---ccC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeee
Q 043530 234 GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWV 280 (343)
Q Consensus 234 ~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l 280 (343)
++||. +-| -++++||+++|+|+|+-... .+...+.+-..|..+
T Consensus 474 DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LV 520 (578)
T PRK15490 474 NVFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFIL 520 (578)
T ss_pred CEEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEE
Confidence 77764 234 56889999999999987543 345555555678777
No 115
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=85.84 E-value=2.8 Score=40.69 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=35.6
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHh------cceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERT------GMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~------G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
.+.+||+++|+|.|+-...+ ....+.+. +.|..+ ..-+.++++++|.+++.
T Consensus 380 l~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~--------~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 380 LTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLF--------EEYDPGALLAALSRALR 436 (473)
T ss_pred HHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEe--------CCCCHHHHHHHHHHHHH
Confidence 37889999999999865432 22222222 667666 23478899999999886
No 116
>PLN02275 transferase, transferring glycosyl groups
Probab=84.54 E-value=1.9 Score=40.41 Aligned_cols=49 Identities=16% Similarity=0.218 Sum_probs=36.8
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
-++++||+++|+|+|+... ..+...+.+.+.|..+ + ..++++++|.+++
T Consensus 323 p~~llEAmA~G~PVVa~~~----gg~~eiv~~g~~G~lv------~----~~~~la~~i~~l~ 371 (371)
T PLN02275 323 PMKVVDMFGCGLPVCAVSY----SCIGELVKDGKNGLLF------S----SSSELADQLLELL 371 (371)
T ss_pred cHHHHHHHHCCCCEEEecC----CChHHHccCCCCeEEE------C----CHHHHHHHHHHhC
Confidence 3579999999999999643 2355555566789877 3 3789999998875
No 117
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=83.76 E-value=1.4 Score=41.00 Aligned_cols=77 Identities=14% Similarity=0.114 Sum_probs=46.9
Q ss_pred CHHHHHHHHH--hhcccccChhHHH-HHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 224 SREQLRELGD--GGFLTYCGWNSVT-KAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvtHgG~~s~~-eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
+...+..+.. +++||-.| ++. ||.+.|+|.|.+=..++.+ .....|..+.+ ..++++|.+++
T Consensus 248 ~~~~~l~ll~~a~~vvgdSs--GI~eEa~~lg~P~v~iR~~geRq----e~r~~~~nvlv---------~~~~~~I~~ai 312 (346)
T PF02350_consen 248 GYEEYLSLLKNADLVVGDSS--GIQEEAPSLGKPVVNIRDSGERQ----EGRERGSNVLV---------GTDPEAIIQAI 312 (346)
T ss_dssp -HHHHHHHHHHESEEEESSH--HHHHHGGGGT--EEECSSS-S-H----HHHHTTSEEEE---------TSSHHHHHHHH
T ss_pred CHHHHHHHHhcceEEEEcCc--cHHHHHHHhCCeEEEecCCCCCH----HHHhhcceEEe---------CCCHHHHHHHH
Confidence 3334444433 99999999 666 9999999999982222211 12233555445 26899999999
Q ss_pred HHHhCCHHHHHHHHH
Q 043530 301 SEMMGNELLRIQEMR 315 (343)
Q Consensus 301 ~~vl~~~~~r~~a~~ 315 (343)
++++.++++.++.+.
T Consensus 313 ~~~l~~~~~~~~~~~ 327 (346)
T PF02350_consen 313 EKALSDKDFYRKLKN 327 (346)
T ss_dssp HHHHH-HHHHHHHHC
T ss_pred HHHHhChHHHHhhcc
Confidence 999977555544443
No 118
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=83.66 E-value=6 Score=37.07 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=32.1
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+-++|++++|+|+|+.++ ...+...+.++.. .-+.+++.++|.+++.+
T Consensus 293 ~Kl~EylA~G~PVVat~~-------~~~~~~~~~~~~~---------~~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 293 LKLFEYLAAGKPVVATPL-------PEVRRYEDEVVLI---------ADDPEEFVAAIEKALLE 340 (373)
T ss_pred chHHHHhccCCCEEecCc-------HHHHhhcCcEEEe---------CCCHHHHHHHHHHHHhc
Confidence 458999999999998763 1122222323223 12799999999997753
No 119
>PRK14098 glycogen synthase; Provisional
Probab=83.03 E-value=3.4 Score=40.44 Aligned_cols=54 Identities=20% Similarity=0.186 Sum_probs=33.6
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
.+.+||+++|+|.|+....+-.........+.+-|..+ ..-+.++++++|.+++
T Consensus 396 l~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~--------~~~d~~~la~ai~~~l 449 (489)
T PRK14098 396 MLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF--------HDYTPEALVAKLGEAL 449 (489)
T ss_pred HHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe--------CCCCHHHHHHHHHHHH
Confidence 37889999999888776533111000001113567666 2346899999999876
No 120
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=82.77 E-value=10 Score=36.78 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=63.6
Q ss_pred CCHHHHHHHHH--hhccc---ccChh-HHHHHHHhCce----EEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCccc
Q 043530 223 MSREQLRELGD--GGFLT---YCGWN-SVTKAMWNGVQ----VLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMK 292 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvt---HgG~~-s~~eal~~GVP----~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t 292 (343)
.+.+++.++.. ++|+. +=|+| +..||+++|+| +|+--+.+-.. .+ +-|+.++ .-+
T Consensus 344 ~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~----~l---~~gllVn--------P~d 408 (456)
T TIGR02400 344 YDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ----EL---NGALLVN--------PYD 408 (456)
T ss_pred CCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH----Hh---CCcEEEC--------CCC
Confidence 34555555433 66664 33655 66799999999 66654444221 12 2466662 347
Q ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 293 GEQIAENISEMMGN--ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 293 ~~~l~~ai~~vl~~--~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
.++++++|.++|++ ++.+++.+++.+.+.+ -+...-+++|++++.
T Consensus 409 ~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 409 IDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 89999999999974 3455666666665432 567777888888764
No 121
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=82.11 E-value=9.4 Score=35.69 Aligned_cols=108 Identities=12% Similarity=-0.023 Sum_probs=65.7
Q ss_pred hhcccccChhHHHHHHHhCceEEecc-CCcchhHHHHHHHHhcceeeeec-cCC-C----CcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWP-QHGDQKINADVVERTGMGIWVQS-WGW-G----GEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P-~~~DQ~~na~~v~~~G~G~~l~~-~~~-~----~~~~~t~~~l~~ai~~vl~~ 306 (343)
++.+.-+|-. ++|+..+|+|||+.= +..=-+..+++.......--.+. -+. . -...++++.|.+++.+++.|
T Consensus 266 D~al~aSGT~-tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~ 344 (381)
T COG0763 266 DAALAASGTA-TLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN 344 (381)
T ss_pred hHHHHhccHH-HHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC
Confidence 5555566654 578888999999852 11112334444444321100000 000 0 12568999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 307 ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 307 ~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+.-++.-++--+.++.....+++++.+.+.+++.+.
T Consensus 345 ~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 345 GDRREALKEKFRELHQYLREDPASEIAAQAVLELLL 380 (381)
T ss_pred hHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhc
Confidence 855555555555556666666788999998888764
No 122
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=80.16 E-value=4.9 Score=38.91 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=35.2
Q ss_pred hHHHHHHHhCceEEeccCCc--chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 243 NSVTKAMWNGVQVLAWPQHG--DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
.+.+||+++|+|+|+-...+ |.-.+.....+.|.|..++ .-+.++++++|.+++.
T Consensus 385 l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~--------~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 385 LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFE--------GYNADALLAALRRALA 441 (476)
T ss_pred HHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeC--------CCCHHHHHHHHHHHHH
Confidence 47899999999999866433 2111110001234677772 3468999999999885
No 123
>PLN02949 transferase, transferring glycosyl groups
Probab=80.05 E-value=7.7 Score=37.71 Aligned_cols=55 Identities=27% Similarity=0.290 Sum_probs=33.8
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHh--c-ceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERT--G-MGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLR 310 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~--G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r 310 (343)
.++.||+++|+|+|+....+-- ...+.+. | .|... -+.++++++|.++++ +++.+
T Consensus 369 ivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~----------~~~~~la~ai~~ll~~~~~~r 427 (463)
T PLN02949 369 ISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA----------TTVEEYADAILEVLRMRETER 427 (463)
T ss_pred hHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC----------CCHHHHHHHHHHHHhCCHHHH
Confidence 3789999999999997543210 0000110 1 12221 278999999999998 44433
No 124
>PRK00654 glgA glycogen synthase; Provisional
Probab=79.00 E-value=6.3 Score=38.24 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=38.6
Q ss_pred hhccc---ccCh-hHHHHHHHhCceEEeccCCc--chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 GGFLT---YCGW-NSVTKAMWNGVQVLAWPQHG--DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 ~~fvt---HgG~-~s~~eal~~GVP~l~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
++|+. +-|+ .+.+||+++|+|.|+--..+ |.-.+...-.+.+-|..+ ..-+.++++++|.+++.
T Consensus 358 Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv--------~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 358 DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF--------DDFNAEDLLRALRRALE 427 (466)
T ss_pred CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe--------CCCCHHHHHHHHHHHHH
Confidence 55553 2233 47889999999999865432 211110000122667766 23478999999999885
No 125
>PLN02846 digalactosyldiacylglycerol synthase
Probab=78.37 E-value=6.5 Score=38.13 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=38.5
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++||.= +-.++++||+++|+|+|+.-..+ | ..+.+-+-|... -+.+++++++.++|.+
T Consensus 302 DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~----------~~~~~~a~ai~~~l~~ 363 (462)
T PLN02846 302 KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTY----------DDGKGFVRATLKALAE 363 (462)
T ss_pred CEEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEec----------CCHHHHHHHHHHHHcc
Confidence 666654 44678899999999999964322 2 222222333222 2688999999999974
No 126
>PLN02501 digalactosyldiacylglycerol synthase
Probab=77.14 E-value=8.4 Score=39.23 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=40.7
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++||. -|=.++++||+++|+|+|+--.-+... ...|.+..+ .-+.++++++|.++|.++.-
T Consensus 620 DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~------V~~g~nGll---------~~D~EafAeAI~~LLsd~~~ 684 (794)
T PLN02501 620 KVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF------FRSFPNCLT---------YKTSEDFVAKVKEALANEPQ 684 (794)
T ss_pred CEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce------EeecCCeEe---------cCCHHHHHHHHHHHHhCchh
Confidence 56654 233568899999999999976544221 112333333 13689999999999987653
No 127
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=75.68 E-value=5.9 Score=37.06 Aligned_cols=117 Identities=18% Similarity=0.085 Sum_probs=68.7
Q ss_pred CcEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH--hhcccccChhHHHHHHHhCceEEecc
Q 043530 182 PLVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD--GGFLTYCGWNSVTKAMWNGVQVLAWP 259 (343)
Q Consensus 182 p~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--~~fvtHgG~~s~~eal~~GVP~l~~P 259 (343)
+++..|-|.|+.+. -....|-.-+..+.+..+ -.+.-..+..+.. .+++|-.| |-.-||-..|+|.+++=
T Consensus 236 ~~~~viyp~H~~~~--v~e~~~~~L~~~~~v~li-----~pl~~~~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl~lR 307 (383)
T COG0381 236 PDVIVIYPVHPRPR--VRELVLKRLKNVERVKLI-----DPLGYLDFHNLMKNAFLILTDSG-GIQEEAPSLGKPVLVLR 307 (383)
T ss_pred CCceEEEeCCCChh--hhHHHHHHhCCCCcEEEe-----CCcchHHHHHHHHhceEEEecCC-chhhhHHhcCCcEEeec
Confidence 67888888887621 111111111111123332 1222233333333 34444443 23458999999999998
Q ss_pred CCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 260 QHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 260 ~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
...+|+. .++.|.-+.+ ..+++.|.+++.++++++++.+|......-
T Consensus 308 ~~TERPE----~v~agt~~lv---------g~~~~~i~~~~~~ll~~~~~~~~m~~~~np 354 (383)
T COG0381 308 DTTERPE----GVEAGTNILV---------GTDEENILDAATELLEDEEFYERMSNAKNP 354 (383)
T ss_pred cCCCCcc----ceecCceEEe---------CccHHHHHHHHHHHhhChHHHHHHhcccCC
Confidence 8888887 3344555554 356799999999999998888765544433
No 128
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=74.95 E-value=5.7 Score=39.17 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=38.8
Q ss_pred hhccccc---ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHH
Q 043530 234 GGFLTYC---GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNEL 308 (343)
Q Consensus 234 ~~fvtHg---G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~ 308 (343)
+++|.=+ |.++.+||+++|+|+| .......|++..=|..+ -+..+|.++|..+|.+++
T Consensus 430 rl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li----------~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 430 RLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYII----------DDISELLKALDYYLDNLK 490 (519)
T ss_pred eEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEe----------CCHHHHHHHHHHHHhCHH
Confidence 5555443 6779999999999999 11122223333333333 378999999999999874
No 129
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=74.43 E-value=8.8 Score=36.68 Aligned_cols=51 Identities=22% Similarity=0.193 Sum_probs=35.0
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHH----HhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVE----RTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE 307 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~----~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~ 307 (343)
.++.||+++|+|+|+.-..+. ..-+. +-..|... -+.++++++|.++++++
T Consensus 339 i~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g~~G~l~----------~d~~~la~ai~~ll~~~ 393 (419)
T cd03806 339 IGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGGPTGFLA----------STAEEYAEAIEKILSLS 393 (419)
T ss_pred cHHHHHHHcCCcEEEEcCCCC----chheeeccCCCCceEEe----------CCHHHHHHHHHHHHhCC
Confidence 478999999999998643321 11122 23456544 17899999999999854
No 130
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.16 E-value=29 Score=30.62 Aligned_cols=62 Identities=23% Similarity=0.252 Sum_probs=38.4
Q ss_pred ChhH-HHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHH
Q 043530 241 GWNS-VTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEM 314 (343)
Q Consensus 241 G~~s-~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~ 314 (343)
|.+. +.||+++|+|+++... ......+.+.+.|. +. . ....+++.+++..++.+++.++...
T Consensus 288 ~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~~~~~~g~-~~-----~--~~~~~~~~~~i~~~~~~~~~~~~~~ 350 (381)
T COG0438 288 GFGLVLLEAMAAGTPVIASDV----GGIPEVVEDGETGL-LV-----P--PGDVEELADALEQLLEDPELREELG 350 (381)
T ss_pred cchHHHHHHHhcCCcEEECCC----CChHHHhcCCCceE-ec-----C--CCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 4443 6999999999977543 32222233333466 41 1 1178999999999998774333333
No 131
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=73.82 E-value=47 Score=30.42 Aligned_cols=48 Identities=19% Similarity=0.057 Sum_probs=33.8
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHH---HHHHhcceeeee
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINAD---VVERTGMGIWVQ 281 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~---~v~~~G~G~~l~ 281 (343)
.+|||-=-.+-+.||+..|+|+.++|+-.-.....+ .+.+.|+-..+.
T Consensus 231 ~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~ 281 (311)
T PF06258_consen 231 AIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFT 281 (311)
T ss_pred EEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECC
Confidence 677777777888999999999999998772222222 345556666653
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=72.98 E-value=18 Score=34.46 Aligned_cols=54 Identities=19% Similarity=0.014 Sum_probs=35.0
Q ss_pred hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||.- |--++++||+++|+|+|+-...+ ... +.+.+-|..++ .-+.+++++++
T Consensus 308 DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~E-iv~~~~G~lv~--------~~d~~~La~~~ 365 (405)
T PRK10125 308 DALVFSSRVDNYPLILCEALSIGVPVIATHSDA----ARE-VLQKSGGKTVS--------EEEVLQLAQLS 365 (405)
T ss_pred CEEEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeCCcEEEEC--------CCCHHHHHhcc
Confidence 666643 44568899999999999987765 112 23335687772 23567777643
No 133
>PLN02316 synthase/transferase
Probab=72.46 E-value=21 Score=38.28 Aligned_cols=95 Identities=12% Similarity=0.025 Sum_probs=54.6
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCc--chhHHHH----HHHH---hcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHG--DQKINAD----VVER---TGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~--DQ~~na~----~v~~---~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++|+. -+=..+.+||+++|+|.|+-...+ |.-.... +... .+-|..+ ...+++.|..+|
T Consensus 921 DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf--------~~~d~~aLa~AL 992 (1036)
T PLN02316 921 DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF--------DGADAAGVDYAL 992 (1036)
T ss_pred cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe--------CCCCHHHHHHHH
Confidence 66663 233458899999999888765433 2111110 0000 1356665 345788999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 043530 301 SEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELV 338 (343)
Q Consensus 301 ~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~ 338 (343)
.+++.+ |.+....+++..++++...-|-...+++.+
T Consensus 993 ~raL~~--~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316 993 NRAISA--WYDGRDWFNSLCKRVMEQDWSWNRPALDYM 1028 (1036)
T ss_pred HHHHhh--hhhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 999953 334444556666666555555444444443
No 134
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=72.15 E-value=7.3 Score=35.24 Aligned_cols=78 Identities=18% Similarity=0.149 Sum_probs=48.5
Q ss_pred ceEEEEcCC--------CccChHHHHHHHHHHHHCCCCC---Cc--c-----hH---h---------------hhcccCC
Q 043530 11 RLFALLSSS--------GMGHLTPFLRLAALLTAHHVKS---PE--N-----HV---T---------------SSLSLLP 54 (343)
Q Consensus 11 ~~il~~~~p--------~~GH~~p~l~La~~L~~rGh~V---~~--~-----~i---~---------------~~~~~l~ 54 (343)
|||++++.. ..|--.-...|++.|.++||+| +. . .. . .....+.
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAE 80 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHH
Confidence 578887643 2355567899999999999999 11 0 00 0 0111122
Q ss_pred C-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEec
Q 043530 55 S-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFT 90 (343)
Q Consensus 55 ~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~ 90 (343)
. +++.++|+|.+-. ...... +++..++|++....
T Consensus 81 ~~~~~~~~Divh~~~-~~~~~~-~~~~~~~~~v~~~h 115 (335)
T cd03802 81 RALAAGDFDIVHNHS-LHLPLP-FARPLPVPVVTTLH 115 (335)
T ss_pred HHHhcCCCCEEEecC-cccchh-hhcccCCCEEEEec
Confidence 2 4566899988765 332333 78889999876443
No 135
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.67 E-value=21 Score=32.44 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=42.0
Q ss_pred HHHHHhCceEEeccCCcchhHHH--HHHHHh-cceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHH
Q 043530 246 TKAMWNGVQVLAWPQHGDQKINA--DVVERT-GMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMR 315 (343)
Q Consensus 246 ~eal~~GVP~l~~P~~~DQ~~na--~~v~~~-G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~ 315 (343)
-+++-.|||++.+|-.+-|+.-. .+=.++ |..+.+-+ -....-..+.++++.|+.+.++++.
T Consensus 324 EQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~--------~~aq~a~~~~q~ll~dp~r~~air~ 388 (412)
T COG4370 324 EQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR--------PEAQAAAQAVQELLGDPQRLTAIRH 388 (412)
T ss_pred HHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC--------CchhhHHHHHHHHhcChHHHHHHHh
Confidence 45677899999999999997654 444444 88877721 1223333344459999998877763
No 136
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=69.79 E-value=15 Score=35.02 Aligned_cols=24 Identities=38% Similarity=0.347 Sum_probs=21.7
Q ss_pred CCCccChHHHHHHHHHHHHCCCCC
Q 043530 18 SSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 18 ~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
..+.|-+.-.+.|.+.|++||++|
T Consensus 9 ~SG~GKTTvT~glm~aL~~rg~~V 32 (451)
T COG1797 9 SSGSGKTTVTLGLMRALRRRGLKV 32 (451)
T ss_pred CCCCcHHHHHHHHHHHHHhcCCcc
Confidence 336799999999999999999999
No 137
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=69.59 E-value=4.8 Score=37.52 Aligned_cols=76 Identities=13% Similarity=-0.001 Sum_probs=47.7
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHC---CCCC--Cc---ch---Hh-------------------------hhcccCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAH---HVKS--PE---NH---VT-------------------------SSLSLLPS 55 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~r---Gh~V--~~---~~---i~-------------------------~~~~~l~~ 55 (343)
||+++.. .+.|+.-+..+.++|.++ ++.+ |. +. +. .++..+..
T Consensus 2 ~i~~~~g-tr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (365)
T TIGR00236 2 KVSIVLG-TRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNMLEGLEE 80 (365)
T ss_pred eEEEEEe-cCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHHHHHH
Confidence 5665544 688888899999999886 3343 32 10 10 00111222
Q ss_pred -cCCCCCCEEEE--CCCCccchHHHHHHcCCCcEEE
Q 043530 56 -LSSPPLSAPVT--DMTLTASVLPISRAINVPNYIF 88 (343)
Q Consensus 56 -l~~~~~D~vi~--D~~~~~~~~~~A~~lgiP~v~~ 88 (343)
+++.+||+|++ |.+...++..+|.++|||++.+
T Consensus 81 ~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 81 LLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 45669999888 4423345788899999998754
No 138
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=68.52 E-value=1.4 Score=34.90 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHCCCCCC---c------c-----hH--------h--------hhcccCCC-c--CCCCCCEEEECCCCcc
Q 043530 26 PFLRLAALLTAHHVKSP---E------N-----HV--------T--------SSLSLLPS-L--SSPPLSAPVTDMTLTA 72 (343)
Q Consensus 26 p~l~La~~L~~rGh~V~---~------~-----~i--------~--------~~~~~l~~-l--~~~~~D~vi~D~~~~~ 72 (343)
-+..|+++|+++||+|+ . . .+ . .....+.. + ++.+||+|.+-.....
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~~~~~~ 85 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAHSPTAG 85 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEEHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEecccchh
Confidence 46789999999999991 1 0 00 0 11112233 5 6779999888762332
Q ss_pred chHHHHH-HcCCCcEEEe
Q 043530 73 SVLPISR-AINVPNYIFF 89 (343)
Q Consensus 73 ~~~~~A~-~lgiP~v~~~ 89 (343)
+...+++ ..++|+|...
T Consensus 86 ~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 86 LVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HHHHHHHHHHT--EEEE-
T ss_pred HHHHHHHHccCCcEEEEE
Confidence 3344555 7899987654
No 139
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=68.25 E-value=15 Score=35.74 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=54.8
Q ss_pred CHHHHHHHHH--hhccc---ccChh-HHHHHHHhCce----EEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccH
Q 043530 224 SREQLRELGD--GGFLT---YCGWN-SVTKAMWNGVQ----VLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKG 293 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvt---HgG~~-s~~eal~~GVP----~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~ 293 (343)
+.+++.++.. ++|+. .-|+| +++||+++|+| +|+--..+-... ..-|+.+ ..-+.
T Consensus 350 ~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~~~g~lv--------~p~d~ 414 (460)
T cd03788 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------LSGALLV--------NPYDI 414 (460)
T ss_pred CHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------cCCCEEE--------CCCCH
Confidence 4444444433 55552 34554 56899999999 444322221110 1235555 23478
Q ss_pred HHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 294 EQIAENISEMMGNEL--LRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 294 ~~l~~ai~~vl~~~~--~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++++++|.+++.++. .+.+.++..+ .+ ..-+...-++++++++
T Consensus 415 ~~la~ai~~~l~~~~~e~~~~~~~~~~----~v-~~~~~~~w~~~~l~~l 459 (460)
T cd03788 415 DEVADAIHRALTMPLEERRERHRKLRE----YV-RTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH----HH-HhCCHHHHHHHHHHhh
Confidence 999999999998542 2222333333 32 2356677777777765
No 140
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=68.14 E-value=5.7 Score=30.44 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=28.4
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|+++.+.++-.|.....-++..|.++|++|
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V 30 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEV 30 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEE
Confidence 589999999999999999999999999998
No 141
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=66.95 E-value=17 Score=35.08 Aligned_cols=71 Identities=13% Similarity=0.135 Sum_probs=44.3
Q ss_pred hccccc--ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHH-HHH
Q 043530 235 GFLTYC--GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNEL-LRI 311 (343)
Q Consensus 235 ~fvtHg--G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~-~r~ 311 (343)
+-++|| -.+++.||+.+|+|+++.=...-. ...+.. |-.+ ..-..++++++|.++|.+++ +++
T Consensus 352 Ldin~~e~~~~al~eA~~~G~pI~afd~t~~~---~~~i~~---g~l~--------~~~~~~~m~~~i~~lL~d~~~~~~ 417 (438)
T TIGR02919 352 LDINHGNEILNAVRRAFEYNLLILGFEETAHN---RDFIAS---ENIF--------EHNEVDQLISKLKDLLNDPNQFRE 417 (438)
T ss_pred EEccccccHHHHHHHHHHcCCcEEEEecccCC---cccccC---Ccee--------cCCCHHHHHHHHHHHhcCHHHHHH
Confidence 344554 477999999999999996432111 111111 3333 23468999999999999885 555
Q ss_pred HHHHHHHH
Q 043530 312 QEMRIREE 319 (343)
Q Consensus 312 ~a~~l~~~ 319 (343)
+..+-++.
T Consensus 418 ~~~~q~~~ 425 (438)
T TIGR02919 418 LLEQQREH 425 (438)
T ss_pred HHHHHHHH
Confidence 44444443
No 142
>PRK14099 glycogen synthase; Provisional
Probab=66.84 E-value=20 Score=35.06 Aligned_cols=33 Identities=24% Similarity=0.085 Sum_probs=25.5
Q ss_pred CCceEEEEcCC------CccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSS------GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p------~~GH~~p~l~La~~L~~rGh~V 41 (343)
+++||++++.- ..|=-.-.-.|.++|+++||+|
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v 40 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEV 40 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcE
Confidence 56899998754 2244456788999999999999
No 143
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=64.15 E-value=11 Score=29.98 Aligned_cols=33 Identities=15% Similarity=-0.039 Sum_probs=31.2
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++.+|++.+.++-+|-.-..-++..|.++|++|
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eV 34 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEV 34 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEE
Confidence 678999999999999999999999999999998
No 144
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=62.28 E-value=7.7 Score=35.21 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=51.3
Q ss_pred CccChHHHHHHHHHHHHCCCCC--Cc-------chH------------------h-hhcc------cCCC-cCCCCCCEE
Q 043530 20 GMGHLTPFLRLAALLTAHHVKS--PE-------NHV------------------T-SSLS------LLPS-LSSPPLSAP 64 (343)
Q Consensus 20 ~~GH~~p~l~La~~L~~rGh~V--~~-------~~i------------------~-~~~~------~l~~-l~~~~~D~v 64 (343)
-.-|+.-+-+|-++|.++||+| |. +.+ . .... .|.+ +.+.+||+.
T Consensus 9 n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~~L~ki~~~~kpdv~ 88 (346)
T COG1817 9 NPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVYKLSKIIAEFKPDVA 88 (346)
T ss_pred CcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHHHHHHHHhhcCCceE
Confidence 3457888999999999999999 32 111 0 1111 1222 456699999
Q ss_pred EECCCCccchHHHHHHcCCCcEEEecccH
Q 043530 65 VTDMTLTASVLPISRAINVPNYIFFTSSA 93 (343)
Q Consensus 65 i~D~~~~~~~~~~A~~lgiP~v~~~~~~~ 93 (343)
+. . .+.-+..+|.-+|+|.|.|.-+.-
T Consensus 89 i~-~-~s~~l~rvafgLg~psIi~~D~eh 115 (346)
T COG1817 89 IG-K-HSPELPRVAFGLGIPSIIFVDNEH 115 (346)
T ss_pred ee-c-CCcchhhHHhhcCCceEEecCChh
Confidence 98 6 676788999999999999876643
No 145
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=62.03 E-value=8.6 Score=27.26 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=28.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.-++++..+...|...+-.+|+.|++.|..|
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V 46 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAV 46 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEE
Confidence 5688888889999999999999999999998
No 146
>PLN02939 transferase, transferring glycosyl groups
Probab=60.88 E-value=37 Score=35.99 Aligned_cols=34 Identities=9% Similarity=-0.011 Sum_probs=25.7
Q ss_pred CCCceEEEEcCCC-----c-cChHHHHHHHHHHHHCCCCC
Q 043530 8 KPSRLFALLSSSG-----M-GHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 8 ~~~~~il~~~~p~-----~-GH~~p~l~La~~L~~rGh~V 41 (343)
.+++||++++.-. . |=-.-.-.|.++|++.||+|
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV 518 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLV 518 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeE
Confidence 4689999997542 2 33345678999999999999
No 147
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=59.89 E-value=6.4 Score=38.20 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=43.8
Q ss_pred hhcccccC---hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHH---HHHHHHHHHhCCH
Q 043530 234 GGFLTYCG---WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGE---QIAENISEMMGNE 307 (343)
Q Consensus 234 ~~fvtHgG---~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~---~l~~ai~~vl~~~ 307 (343)
.+|++--+ .-++.||+++|.|+++. ++-.-+..++..--|..+ +. +++ .+++++.++..|+
T Consensus 368 ~v~~qPa~E~FGiv~IEAMa~glPvvAt----~~GGP~EiV~~~~tG~l~------dp---~~e~~~~~a~~~~kl~~~p 434 (495)
T KOG0853|consen 368 GVLYQPANEHFGIVPIEAMACGLPVVAT----NNGGPAEIVVHGVTGLLI------DP---GQEAVAELADALLKLRRDP 434 (495)
T ss_pred eEEecCCCCCccceeHHHHhcCCCEEEe----cCCCceEEEEcCCcceee------CC---chHHHHHHHHHHHHHhcCH
Confidence 45554333 23789999999999995 222222233333344444 22 555 6999999999999
Q ss_pred HHHHHHHH
Q 043530 308 LLRIQEMR 315 (343)
Q Consensus 308 ~~r~~a~~ 315 (343)
+++.+..+
T Consensus 435 ~l~~~~~~ 442 (495)
T KOG0853|consen 435 ELWARMGK 442 (495)
T ss_pred HHHHHHHH
Confidence 98766544
No 148
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=59.07 E-value=14 Score=33.01 Aligned_cols=51 Identities=10% Similarity=0.089 Sum_probs=37.3
Q ss_pred hhcccccChhHHHHHHH------hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW------NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~------~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+-||=||++.|++ .++|++++- .|- + +-...+.++++.+++++++++
T Consensus 37 Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN----------------~G~-l-----GFL~~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 37 DIVISVGGDGTLLSAFHRYENQLDKVRFVGVH----------------TGH-L-----GFYTDWRPFEVDKLVIALAKD 93 (265)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCCeEEEEe----------------CCC-c-----eecccCCHHHHHHHHHHHHcC
Confidence 78999999999999986 488999874 331 2 012345678888888888753
No 149
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=57.70 E-value=19 Score=33.80 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=43.9
Q ss_pred CCHHHHHHHHH--hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 223 MSREQLRELGD--GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++-.++..+.. +++||-++.+- .||.+.|||.|.+- +.+ ...+.|.-+.+ -..++++|.+++
T Consensus 270 l~~~~~l~Ll~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~~g~nvl~--------vg~~~~~I~~a~ 333 (365)
T TIGR03568 270 LGQERYLSLLKNADAVIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRLRADSVID--------VDPDKEEIVKAI 333 (365)
T ss_pred CChHHHHHHHHhCCEEEEcChhHH-HhhhhcCCCEEeec---CCc----hhhhhcCeEEE--------eCCCHHHHHHHH
Confidence 34455555544 88888774444 99999999999763 211 11233433332 135789999999
Q ss_pred HHHhCCHHHH
Q 043530 301 SEMMGNELLR 310 (343)
Q Consensus 301 ~~vl~~~~~r 310 (343)
++++ +++++
T Consensus 334 ~~~~-~~~~~ 342 (365)
T TIGR03568 334 EKLL-DPAFK 342 (365)
T ss_pred HHHh-ChHHH
Confidence 9955 55443
No 150
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=57.01 E-value=14 Score=33.27 Aligned_cols=40 Identities=25% Similarity=0.428 Sum_probs=34.2
Q ss_pred cccChhHHH--HHHHhCceEEeccCCcchhHHHHH-HHHhcce
Q 043530 238 TYCGWNSVT--KAMWNGVQVLAWPQHGDQKINADV-VERTGMG 277 (343)
Q Consensus 238 tHgG~~s~~--eal~~GVP~l~~P~~~DQ~~na~~-v~~~G~G 277 (343)
-=||||+++ -|-.+||-++++-+...|..+++. +...|.-
T Consensus 79 iGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 79 IGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred eCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 358999875 567779999999999999999998 6666888
No 151
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=55.48 E-value=13 Score=35.44 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=28.9
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++-|+++++....|+-..+..+|+.|+++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V 34 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKV 34 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCceE
Confidence 345788888888888899999999999999999
No 152
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=52.84 E-value=81 Score=24.66 Aligned_cols=67 Identities=10% Similarity=0.180 Sum_probs=46.4
Q ss_pred EEEcCCCccChHHHHHHHHHHHHCCCCCCcchHhhhcccCCCcCCCCCCEEEECCCCc---------cchHHHHHHcCCC
Q 043530 14 ALLSSSGMGHLTPFLRLAALLTAHHVKSPENHVTSSLSLLPSLSSPPLSAPVTDMTLT---------ASVLPISRAINVP 84 (343)
Q Consensus 14 l~~~~p~~GH~~p~l~La~~L~~rGh~V~~~~i~~~~~~l~~l~~~~~D~vi~D~~~~---------~~~~~~A~~lgiP 84 (343)
+|++..+.|-..-.+.|++.|.++|.+|.- ++.+.. .|++|.|. .. ....++++.++.|
T Consensus 3 ~~~~~~~~Gkt~~~~~l~~~l~~~~~~v~~---------~kp~~~--~d~vliEG-aGg~~~p~~~~~~~~d~~~~~~~~ 70 (134)
T cd03109 3 GFGTGTDIGKTVATAILARALKEKGYRVAP---------LKPVQT--YDFVLVEG-AGGLCVPLKEDFTNADVAKELNLP 70 (134)
T ss_pred EEeCCCCcCHHHHHHHHHHHHHHCCCeEEE---------EecCCC--CCEEEEEC-CCccccCCCCCCCHHHHHHHhCCC
Confidence 566777789999999999999999999721 011111 46666665 21 1357889999999
Q ss_pred cEEEeccc
Q 043530 85 NYIFFTSS 92 (343)
Q Consensus 85 ~v~~~~~~ 92 (343)
.+.+.+..
T Consensus 71 vllV~~~~ 78 (134)
T cd03109 71 AILVTSAG 78 (134)
T ss_pred EEEEEcCC
Confidence 88777553
No 153
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=52.78 E-value=15 Score=26.52 Aligned_cols=60 Identities=8% Similarity=0.128 Sum_probs=36.6
Q ss_pred HHHHHHHHHHCCCCC--Cc---chHhh-------hcccC-------CC-cCCCCCCEEEECCCC--------ccchHHHH
Q 043530 27 FLRLAALLTAHHVKS--PE---NHVTS-------SLSLL-------PS-LSSPPLSAPVTDMTL--------TASVLPIS 78 (343)
Q Consensus 27 ~l~La~~L~~rGh~V--~~---~~i~~-------~~~~l-------~~-l~~~~~D~vi~D~~~--------~~~~~~~A 78 (343)
++.+++.|.+.|+++ |+ ++++. ....+ .+ +++-++|+||.-..- .+....+|
T Consensus 2 ~~~~~~~l~~lG~~i~AT~gTa~~L~~~Gi~~~~~~~ki~~~~~~i~~~i~~g~id~VIn~~~~~~~~~~~d~~~iRr~A 81 (90)
T smart00851 2 LVELAKRLAELGFELVATGGTAKFLREAGLPVKTLHPKVHGGILAILDLIKNGEIDLVINTLYPLGAQPHEDGKALRRAA 81 (90)
T ss_pred HHHHHHHHHHCCCEEEEccHHHHHHHHCCCcceeccCCCCCCCHHHHHHhcCCCeEEEEECCCcCcceeccCcHHHHHHH
Confidence 468899999999999 44 33311 11111 11 455689999885411 22345578
Q ss_pred HHcCCCcE
Q 043530 79 RAINVPNY 86 (343)
Q Consensus 79 ~~lgiP~v 86 (343)
...|||++
T Consensus 82 ~~~~Ip~~ 89 (90)
T smart00851 82 ENIDIPGA 89 (90)
T ss_pred HHcCCCee
Confidence 88888875
No 154
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=52.77 E-value=74 Score=31.86 Aligned_cols=71 Identities=10% Similarity=-0.044 Sum_probs=40.6
Q ss_pred hhccc---ccC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHh--cceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERT--GMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~--G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++||. +=| ..+.+||+++|+|+|+-...+=- ..+..+... ..|+.+.... ...-.-+.++|++++.+++..
T Consensus 476 dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~-~~v~E~v~~~~~~gi~V~~r~-~~~~~e~v~~La~~m~~~~~~ 552 (590)
T cd03793 476 HLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFG-CFMEEHIEDPESYGIYIVDRR-FKSPDESVQQLTQYMYEFCQL 552 (590)
T ss_pred eEEEeccccCCCCcHHHHHHHcCCCEEEccCcchh-hhhHHHhccCCCceEEEecCC-ccchHHHHHHHHHHHHHHhCC
Confidence 44544 344 44789999999999997653310 111222222 2577773210 011234678888888888853
No 155
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=52.58 E-value=20 Score=32.47 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=37.3
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+-||=||+++++.. ++|++++- .|. + +-...++.+++.++|.+++.+
T Consensus 65 d~vi~~GGDGt~l~~~~~~~~~~~pilGIn----------------~G~-l-----GFL~~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 65 DLAVVLGGDGTMLGIGRQLAPYGVPLIGIN----------------HGR-L-----GFITDIPLDDMQETLPPMLAG 119 (291)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEc----------------CCC-c-----cccccCCHHHHHHHHHHHHcC
Confidence 789999999999999874 67888874 331 1 012356778888888888753
No 156
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=52.58 E-value=17 Score=27.57 Aligned_cols=65 Identities=11% Similarity=0.155 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHHCCCCC--Cc---chHhh--------------hcccCCC-cCC-CCCCEEEE--CCCC-------cc
Q 043530 23 HLTPFLRLAALLTAHHVKS--PE---NHVTS--------------SLSLLPS-LSS-PPLSAPVT--DMTL-------TA 72 (343)
Q Consensus 23 H~~p~l~La~~L~~rGh~V--~~---~~i~~--------------~~~~l~~-l~~-~~~D~vi~--D~~~-------~~ 72 (343)
+=.-++.+|+.|.+.|+++ |+ ++++. ..+.+.+ +++ -++|+||. |... .+
T Consensus 10 ~K~~~~~~a~~l~~~G~~i~AT~gTa~~L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~ 89 (112)
T cd00532 10 VKAMLVDLAPKLSSDGFPLFATGGTSRVLADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVINLRDPRRDRCTDEDGT 89 (112)
T ss_pred cHHHHHHHHHHHHHCCCEEEECcHHHHHHHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEEcCCCCcccccCCChH
Confidence 4456889999999999999 44 33210 1122333 777 79999988 3211 22
Q ss_pred chHHHHHHcCCCcEE
Q 043530 73 SVLPISRAINVPNYI 87 (343)
Q Consensus 73 ~~~~~A~~lgiP~v~ 87 (343)
...-+|...|||+++
T Consensus 90 ~iRR~A~~~~Ip~~T 104 (112)
T cd00532 90 ALLRLARLYKIPVTT 104 (112)
T ss_pred HHHHHHHHcCCCEEE
Confidence 234578889999864
No 157
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=52.56 E-value=23 Score=22.02 Aligned_cols=25 Identities=12% Similarity=0.191 Sum_probs=19.0
Q ss_pred cHHHHHHHHHHHhCC-HHHHHHHHHH
Q 043530 292 KGEQIAENISEMMGN-ELLRIQEMRI 316 (343)
Q Consensus 292 t~~~l~~ai~~vl~~-~~~r~~a~~l 316 (343)
|+++|.+||..+..+ -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 578999999999987 6787777654
No 158
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=52.28 E-value=13 Score=34.21 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=26.4
Q ss_pred ceEEEEcCC-CccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSS-GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p-~~GH~~p~l~La~~L~~rGh~V 41 (343)
+||+++++| ..|.-.-...|++.|.+.||+|
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~v 32 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHEV 32 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCce
Confidence 478888876 4477788999999999999999
No 159
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=50.76 E-value=29 Score=28.37 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=21.3
Q ss_pred cCCCCCCEEEECCCCccch-HHHHHH---c-CCCcEEEecc
Q 043530 56 LSSPPLSAPVTDMTLTASV-LPISRA---I-NVPNYIFFTS 91 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~~-~~~A~~---l-giP~v~~~~~ 91 (343)
|++.+||+||+-..+.... ....++ + ++|.+++.|-
T Consensus 85 l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD 125 (169)
T PF06925_consen 85 LREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTD 125 (169)
T ss_pred HhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcC
Confidence 6778999999988333222 221222 3 5777766654
No 160
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=50.09 E-value=41 Score=35.25 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=49.8
Q ss_pred cChh-HHHHHHHhCce---EEeccCCcchhHHHHHHHHhc-ceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHH-HHHH
Q 043530 240 CGWN-SVTKAMWNGVQ---VLAWPQHGDQKINADVVERTG-MGIWVQSWGWGGEAIMKGEQIAENISEMMG-NEL-LRIQ 312 (343)
Q Consensus 240 gG~~-s~~eal~~GVP---~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~-~r~~ 312 (343)
-|+| ..+|++++|+| +++++-++- .+.. .| -|+.++ .-..++++++|.++|. +++ .+++
T Consensus 386 EGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~---l~~~allVn--------P~D~~~lA~AI~~aL~m~~~er~~r 451 (797)
T PLN03063 386 DGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS---LGAGALLVN--------PWNITEVSSAIKEALNMSDEERETR 451 (797)
T ss_pred cccCcchhhHheeecCCCCCEEeeCCcC---chhh---hcCCeEEEC--------CCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 3776 55799999999 455543221 1111 23 466663 4478999999999998 443 4444
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 313 EMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 313 a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
.+++.+.+++ -+...-.++|++.+
T Consensus 452 ~~~~~~~v~~-----~~~~~Wa~~fl~~l 475 (797)
T PLN03063 452 HRHNFQYVKT-----HSAQKWADDFMSEL 475 (797)
T ss_pred HHHHHHhhhh-----CCHHHHHHHHHHHH
Confidence 5555544432 34455566666654
No 161
>PLN02859 glutamine-tRNA ligase
Probab=50.04 E-value=24 Score=36.36 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=43.0
Q ss_pred hHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHHHH--HhcCCCHHHHHH
Q 043530 265 KINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN-------ELLRIQEMRIREEARTA--IEQGGSLKKRLT 335 (343)
Q Consensus 265 ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~-------~~~r~~a~~l~~~~~~a--~~~gg~~~~~~~ 335 (343)
.+.+..-++.|||+.+ |+|+|.++|.++++. ..|+-|...|-..+|+. |+++..-...++
T Consensus 104 ~d~~~Fek~CGVGV~V-----------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~Lkwad~~~~k~~id 172 (788)
T PLN02859 104 FDLNKFEEACGVGVVV-----------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKRLPWADPKIVKKLID 172 (788)
T ss_pred cCHHHHHHhCCCCEEE-----------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhhCCCCCHHHHHHHHH
Confidence 3344444555999888 999999999999862 34777777777777764 244444445555
Q ss_pred HHHHH
Q 043530 336 ELVEM 340 (343)
Q Consensus 336 ~~~~~ 340 (343)
+.+-+
T Consensus 173 ~~~~~ 177 (788)
T PLN02859 173 KKLYE 177 (788)
T ss_pred HHHHH
Confidence 54443
No 162
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=48.27 E-value=22 Score=26.99 Aligned_cols=31 Identities=26% Similarity=0.135 Sum_probs=28.6
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.|+++.+.+..-|-.-+.-|+..|.++||+|
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G~~v 31 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAGHEV 31 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTTBEE
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCCCeE
Confidence 3789999999999999999999999999997
No 163
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=48.12 E-value=11 Score=31.47 Aligned_cols=68 Identities=19% Similarity=0.099 Sum_probs=45.2
Q ss_pred CccChHHHHHHHHHHHHCCCCCCc-chHhhhcccCCC-cCCCCCCEEEECCCCccchH---HHHHHcCCCcEEEecc
Q 043530 20 GMGHLTPFLRLAALLTAHHVKSPE-NHVTSSLSLLPS-LSSPPLSAPVTDMTLTASVL---PISRAINVPNYIFFTS 91 (343)
Q Consensus 20 ~~GH~~p~l~La~~L~~rGh~V~~-~~i~~~~~~l~~-l~~~~~D~vi~D~~~~~~~~---~~A~~lgiP~v~~~~~ 91 (343)
..|+-.....|++.|.++||+|.- . .....+.. +++.+||+|++-. ...... ..+...++|++.....
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~---~~~~~~~~~~~~~~~D~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~h~ 84 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA---LLLLLLLRILRGFKPDVVHAHG-YYPAPLALLLAARLLGIPLVLTVHG 84 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE---echHHHHHHHhhcCCCEEEEcC-CCcHHHHHHHHHhhCCCCEEEEEcC
Confidence 669999999999999999999831 1 00000111 4556999998877 332333 3577889997765443
No 164
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=47.70 E-value=19 Score=31.17 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=26.2
Q ss_pred eEEEEcCC--CccChHHHHHHHHHHHHCCCCC
Q 043530 12 LFALLSSS--GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 12 ~il~~~~p--~~GH~~p~l~La~~L~~rGh~V 41 (343)
++.+++.+ +-|-..-.-+|+..|+++|+.|
T Consensus 3 ~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv 34 (272)
T COG2894 3 RIIVVTSGKGGVGKTTTTANIGTALAQLGKKV 34 (272)
T ss_pred eEEEEecCCCCcCccchhHHHHHHHHHcCCeE
Confidence 46777776 6799999999999999999998
No 165
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=46.99 E-value=19 Score=33.23 Aligned_cols=33 Identities=9% Similarity=-0.085 Sum_probs=22.5
Q ss_pred cCCCCCCEEEECC--CCccchHHHHHHcCCCcEEE
Q 043530 56 LSSPPLSAPVTDM--TLTASVLPISRAINVPNYIF 88 (343)
Q Consensus 56 l~~~~~D~vi~D~--~~~~~~~~~A~~lgiP~v~~ 88 (343)
+++.+||+|++-. +...++..+|+.+|+|++.+
T Consensus 84 l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~ 118 (363)
T cd03786 84 LLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHV 118 (363)
T ss_pred HHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 4455899988743 12234567889999998754
No 166
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.97 E-value=28 Score=31.53 Aligned_cols=51 Identities=10% Similarity=0.037 Sum_probs=37.2
Q ss_pred hhcccccChhHHHHHHH----hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW----NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~----~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+-||=||++.|++ .++|++++- .|. + +-...++.+++.+++++++.+
T Consensus 66 Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN----------------~G~-l-----GFLt~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 66 DFLISLGGDGTLISLCRKAAEYDKFVLGIH----------------AGH-L-----GFLTDITVDEAEKFFQAFFQG 120 (287)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCcEEEEe----------------CCC-c-----ccCCcCCHHHHHHHHHHHHcC
Confidence 78999999999998866 378988873 331 1 123456788888899888864
No 167
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=46.49 E-value=22 Score=26.71 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=43.5
Q ss_pred cChHHHHHHHHHHHHCCCCC--Cc---chHhh-------------hcccCCC-cCCCCCCEEEECCCC------ccchHH
Q 043530 22 GHLTPFLRLAALLTAHHVKS--PE---NHVTS-------------SLSLLPS-LSSPPLSAPVTDMTL------TASVLP 76 (343)
Q Consensus 22 GH~~p~l~La~~L~~rGh~V--~~---~~i~~-------------~~~~l~~-l~~~~~D~vi~D~~~------~~~~~~ 76 (343)
++-.-++.+++.|.+.|+++ |+ .++.. ..+.+.+ +++-++|+||.-..- .++..-
T Consensus 10 ~~k~~~~~~~~~l~~~G~~l~aT~gT~~~l~~~gi~~~~v~~~~~~~~~i~~~i~~~~id~vIn~~~~~~~~~~~~~iRR 89 (110)
T cd01424 10 RDKPEAVEIAKRLAELGFKLVATEGTAKYLQEAGIPVEVVNKVSEGRPNIVDLIKNGEIQLVINTPSGKRAIRDGFSIRR 89 (110)
T ss_pred CcHhHHHHHHHHHHHCCCEEEEchHHHHHHHHcCCeEEEEeecCCCchhHHHHHHcCCeEEEEECCCCCccCccHHHHHH
Confidence 45567889999999999999 43 22211 1122223 556689999984311 245666
Q ss_pred HHHHcCCCcEE
Q 043530 77 ISRAINVPNYI 87 (343)
Q Consensus 77 ~A~~lgiP~v~ 87 (343)
.|-..|||+++
T Consensus 90 ~Av~~~ipl~T 100 (110)
T cd01424 90 AALEYKVPYFT 100 (110)
T ss_pred HHHHhCCCEEe
Confidence 88999999873
No 168
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=46.35 E-value=22 Score=27.56 Aligned_cols=31 Identities=6% Similarity=-0.140 Sum_probs=21.0
Q ss_pred ceEEEEcCCCcc---ChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGMG---HLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~G---H~~p~l~La~~L~~rGh~V 41 (343)
+||+|+--|-.+ .-.-.+.|+.+..+|||+|
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev 34 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEV 34 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEE
Confidence 467777777443 2346789999999999999
No 169
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=46.02 E-value=23 Score=28.31 Aligned_cols=33 Identities=12% Similarity=-0.061 Sum_probs=31.4
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.++||++.+.+.-||=.-.--+++.|++.|++|
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeV 43 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEV 43 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceE
Confidence 588999999999999999999999999999998
No 170
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.79 E-value=15 Score=32.54 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=41.7
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC-----Cc---chHhhh------cc-----cCCC-cCCCCCCEEEECCCCc
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS-----PE---NHVTSS------LS-----LLPS-LSSPPLSAPVTDMTLT 71 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V-----~~---~~i~~~------~~-----~l~~-l~~~~~D~vi~D~~~~ 71 (343)
+|+++-. +|. -..|++.|.++||+| ++ ..+... .. .+.+ +++.++|+|| |...-
T Consensus 2 ~ILvlGG--T~e---gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI-DAtHP 75 (256)
T TIGR00715 2 TVLLMGG--TVD---SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILV-DATHP 75 (256)
T ss_pred eEEEEec--hHH---HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEE-EcCCH
Confidence 5555543 332 567999999999998 22 111100 01 1223 5566899777 54132
Q ss_pred cc------hHHHHHHcCCCcEEEe
Q 043530 72 AS------VLPISRAINVPNYIFF 89 (343)
Q Consensus 72 ~~------~~~~A~~lgiP~v~~~ 89 (343)
++ +..+++.+|||++-|-
T Consensus 76 fA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 76 FAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEE
Confidence 22 3457788999988774
No 171
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=45.50 E-value=29 Score=31.67 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=38.4
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|.+. ++|++++- .| ++ +-...+..+++.+++++++.+
T Consensus 70 Dlvi~iGGDGTlL~aar~~~~~~iPilGIN----------------~G-~l-----GFLt~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 70 KFAIVLGGDGTVLSAARQLAPCGIPLLTIN----------------TG-HL-----GFLTEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCcEEEEe----------------CC-CC-----cccccCCHHHHHHHHHHHHcC
Confidence 789999999999999774 78999873 33 22 113456788999999998864
No 172
>PRK12342 hypothetical protein; Provisional
Probab=45.33 E-value=21 Score=31.61 Aligned_cols=36 Identities=6% Similarity=-0.021 Sum_probs=26.4
Q ss_pred cCCCCCCEEEECCCCcc-----chHHHHHHcCCCcEEEecc
Q 043530 56 LSSPPLSAPVTDMTLTA-----SVLPISRAINVPNYIFFTS 91 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~-----~~~~~A~~lgiP~v~~~~~ 91 (343)
+++..||+|++-.-... -+..+|+.||+|++.+...
T Consensus 105 i~~~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 105 IEKIGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHhCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 45557999998542222 3788999999999987654
No 173
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=44.57 E-value=14 Score=27.39 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=19.4
Q ss_pred chhhhcCCCCceeEEeccCCcc
Q 043530 201 LAWLDDQATGSVVDVSFGSRTA 222 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~~ 222 (343)
..|+.+.+.++.|+||+||...
T Consensus 31 P~Wl~~~~~RpRVcvT~G~~~~ 52 (97)
T PF06722_consen 31 PDWLLEPPGRPRVCVTLGTSVR 52 (97)
T ss_dssp EGGGSSSTSSEEEEEEETHHHC
T ss_pred CcccccCCCCCEEEEEcCCCcc
Confidence 6799988899999999999864
No 174
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=44.48 E-value=85 Score=25.64 Aligned_cols=26 Identities=23% Similarity=0.383 Sum_probs=21.7
Q ss_pred hhcccccC------hhHHHHHHHhCceEEecc
Q 043530 234 GGFLTYCG------WNSVTKAMWNGVQVLAWP 259 (343)
Q Consensus 234 ~~fvtHgG------~~s~~eal~~GVP~l~~P 259 (343)
+++++|+| .+++.||...++|||++.
T Consensus 62 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 62 VAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred EEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 77777877 446789999999999995
No 175
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=44.08 E-value=31 Score=32.83 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=48.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHHCCCCC----C---c---chHhh---------hcc-----cCCC-cCCCCCCEEEEC
Q 043530 13 FALLSSSGMGHLTPFLRLAALLTAHHVKS----P---E---NHVTS---------SLS-----LLPS-LSSPPLSAPVTD 67 (343)
Q Consensus 13 il~~~~p~~GH~~p~l~La~~L~~rGh~V----~---~---~~i~~---------~~~-----~l~~-l~~~~~D~vi~D 67 (343)
.+-+=..+.|.+.-...|+++|.++++++ | + ..... ..+ .++. ++.++||+|++-
T Consensus 52 ~iW~Ha~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~d~~~~~~~~l~~~~Pd~v~~~ 131 (425)
T PRK05749 52 LIWFHAVSVGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPYDLPGAVRRFLRFWRPKLVIIM 131 (425)
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecCCcHHHHHHHHHhhCCCEEEEE
Confidence 34444457899999999999999988663 2 2 11111 111 1112 567799998865
Q ss_pred CC-CccchHHHHHHcCCCcEEEe
Q 043530 68 MT-LTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 68 ~~-~~~~~~~~A~~lgiP~v~~~ 89 (343)
.. +++.....+++.|+|.+.+.
T Consensus 132 ~~~~~~~~l~~~~~~~ip~vl~~ 154 (425)
T PRK05749 132 ETELWPNLIAELKRRGIPLVLAN 154 (425)
T ss_pred ecchhHHHHHHHHHCCCCEEEEe
Confidence 31 23334456788999988754
No 176
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=43.96 E-value=16 Score=33.78 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=48.6
Q ss_pred CccChHHHHHHHHHHHHCCCCC--Cc----chH----hhhcccCCC-cCCCCCCEEEECCCCccc---------hHHHHH
Q 043530 20 GMGHLTPFLRLAALLTAHHVKS--PE----NHV----TSSLSLLPS-LSSPPLSAPVTDMTLTAS---------VLPISR 79 (343)
Q Consensus 20 ~~GH~~p~l~La~~L~~rGh~V--~~----~~i----~~~~~~l~~-l~~~~~D~vi~D~~~~~~---------~~~~A~ 79 (343)
-.|-+-|.+.|-+.|.+ +.+| |- |++ .++...+.. +++.+||++|+-+.|.+. +..+.+
T Consensus 30 ~~g~vGp~~~l~~~l~~-~~eIv~TiiCGDnyf~en~eea~~~i~~mv~~~~pD~viaGPaFnagrYG~acg~v~~aV~e 108 (349)
T PF07355_consen 30 REGPVGPGLMLEKALKD-DAEIVATIICGDNYFNENKEEALKKILEMVKKLKPDVVIAGPAFNAGRYGVACGEVAKAVQE 108 (349)
T ss_pred ccCCCChHHHHHHHhcC-CCEEEEEEEECcchhhhCHHHHHHHHHHHHHhcCCCEEEEcCCcCCchHHHHHHHHHHHHHH
Confidence 34778899999999987 5566 21 443 445555555 888999999999865432 122557
Q ss_pred HcCCCcEEEec
Q 043530 80 AINVPNYIFFT 90 (343)
Q Consensus 80 ~lgiP~v~~~~ 90 (343)
+++||.++-..
T Consensus 109 ~~~IP~vtaM~ 119 (349)
T PF07355_consen 109 KLGIPVVTAMY 119 (349)
T ss_pred hhCCCEEEEec
Confidence 89999886443
No 177
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=43.67 E-value=24 Score=31.36 Aligned_cols=36 Identities=8% Similarity=0.022 Sum_probs=26.5
Q ss_pred cCCCCCCEEEECC-----CCccchHHHHHHcCCCcEEEecc
Q 043530 56 LSSPPLSAPVTDM-----TLTASVLPISRAINVPNYIFFTS 91 (343)
Q Consensus 56 l~~~~~D~vi~D~-----~~~~~~~~~A~~lgiP~v~~~~~ 91 (343)
+++..||+|++-. ....-+..+|+.||+|++++...
T Consensus 108 i~~~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 108 AQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHhCCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 4556899999854 12224677999999999987654
No 178
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.02 E-value=32 Score=31.22 Aligned_cols=51 Identities=20% Similarity=0.267 Sum_probs=38.2
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|... ++|++++- .|. + +-...++++++.+++++++.+
T Consensus 66 dlvi~lGGDGT~L~aa~~~~~~~~PilGIN----------------~G~-l-----GFLt~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 66 DMVISIGGDGTFLRTATYVGNSNIPILGIN----------------TGR-L-----GFLATVSKEEIEETIDELLNG 120 (292)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEe----------------cCC-C-----CcccccCHHHHHHHHHHHHcC
Confidence 789999999999998873 78988874 331 2 123456789999999999864
No 179
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=42.83 E-value=45 Score=31.24 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=20.4
Q ss_pred EEEcCCCccChHHHHHHHHHHHHC-CC
Q 043530 14 ALLSSSGMGHLTPFLRLAALLTAH-HV 39 (343)
Q Consensus 14 l~~~~p~~GH~~p~l~La~~L~~r-Gh 39 (343)
++....+.||...--+|.++|.++ |.
T Consensus 3 ils~~~G~GH~~aa~al~~~~~~~~~~ 29 (382)
T PLN02605 3 ILMSDTGGGHRASAEAIKDAFQLEFGD 29 (382)
T ss_pred EEEEcCCcChHHHHHHHHHHHHhhcCC
Confidence 344455889999999999999875 54
No 180
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=41.71 E-value=27 Score=28.71 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=19.0
Q ss_pred hHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 265 KINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 265 ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
.+.+..-++.|||+.+ |+|+|.++|.++++
T Consensus 102 ~d~~~Fe~~cGVGV~V-----------T~E~I~~~V~~~i~ 131 (164)
T PF04558_consen 102 IDVAEFEKACGVGVVV-----------TPEQIEAAVEKYIE 131 (164)
T ss_dssp --HHHHHHTTTTT---------------HHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCeEE-----------CHHHHHHHHHHHHH
Confidence 3344444556999887 99999999999995
No 181
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=41.12 E-value=60 Score=26.51 Aligned_cols=18 Identities=28% Similarity=0.237 Sum_probs=16.0
Q ss_pred hhHHHHHHHhCceEEecc
Q 043530 242 WNSVTKAMWNGVQVLAWP 259 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P 259 (343)
.+++.+|...++|+|++.
T Consensus 79 ~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 79 LNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 467889999999999996
No 182
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.96 E-value=1.3e+02 Score=24.64 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=36.9
Q ss_pred hhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 043530 264 QKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEA 320 (343)
Q Consensus 264 Q~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~ 320 (343)
+..|+.+.++.|.-..+ --+..|+++|.++..+-|+|..-.+-+..+++..
T Consensus 110 ~~LN~aY~~rFgfPfI~------aVkg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~ 160 (176)
T COG3195 110 TELNAAYVERFGFPFII------AVKGNTKDTILAAFERRLDNDREQEFATALAEIE 160 (176)
T ss_pred HHHHHHHHHhcCCceEE------eecCCCHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 35688888888888776 3456779999999999998765555555555443
No 183
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.94 E-value=35 Score=31.03 Aligned_cols=51 Identities=10% Similarity=0.134 Sum_probs=37.8
Q ss_pred hhcccccChhHHHHHHH----hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW----NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~----~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|.+ .++|++++=.. .+|. ...++.+++.+++++++.+
T Consensus 70 D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-------------~lGF---------L~~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 70 DLVAVLGGDGTFLSVAREIAPRAVPIIGINQG-------------HLGF---------LTQIPREYMTDKLLPVLEG 124 (296)
T ss_pred CEEEEECCcHHHHHHHHHhcccCCCEEEEecC-------------CCeE---------eeccCHHHHHHHHHHHHcC
Confidence 78999999999999875 37899887321 1232 2356789999999998864
No 184
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.74 E-value=41 Score=30.13 Aligned_cols=51 Identities=14% Similarity=0.203 Sum_probs=37.4
Q ss_pred hhcccccChhHHHHHHH-hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW-NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~-~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|.+ +..|++++- .|. + +-...++.+++.+++++++.+
T Consensus 54 D~vi~lGGDGT~L~a~~~~~~PilGIN----------------~G~-l-----GFL~~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 54 DVIITIGGDGTILRTLQRAKGPILGIN----------------MGG-L-----GFLTEIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CEEEEEcCcHHHHHHHHHcCCCEEEEE----------------CCC-C-----ccCcccCHHHHHHHHHHHHcC
Confidence 78999999999999987 456777662 231 1 123357889999999999864
No 185
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.70 E-value=43 Score=28.39 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=30.7
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++.++++.+.++-.|-....-++..|.++|++|
T Consensus 81 ~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~v 113 (201)
T cd02070 81 KKGKVVIGTVEGDIHDIGKNLVATMLEANGFEV 113 (201)
T ss_pred CCCeEEEEecCCccchHHHHHHHHHHHHCCCEE
Confidence 367999999999999999999999999999997
No 186
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.47 E-value=46 Score=29.67 Aligned_cols=52 Identities=8% Similarity=0.025 Sum_probs=37.1
Q ss_pred hhcccccChhHHHHHHHh-----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN-----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~-----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|+.. .+|++++-.. | ++ +-...++.+++.+++.+++.+
T Consensus 41 D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~---------------G-~l-----GFL~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 41 NIIVSIGGDGTFLQAVRKTGFREDCLYAGISTK---------------D-QL-----GFYCDFHIDDLDKMIQAITKE 97 (264)
T ss_pred cEEEEECCcHHHHHHHHHhcccCCCeEEeEecC---------------C-CC-----eEcccCCHHHHHHHHHHHHcC
Confidence 789999999999999874 5787776431 2 11 012356778899999888864
No 187
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=38.06 E-value=40 Score=30.81 Aligned_cols=51 Identities=20% Similarity=0.179 Sum_probs=38.2
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|.+. ++|++++.+. .+|. ...+.++++.+++++++.+
T Consensus 74 D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G-------------~lGF---------L~~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 74 ELVLVLGGDGTILRAAELARAADVPVLGVNLG-------------HVGF---------LAEAEAEDLDEAVERVVDR 128 (306)
T ss_pred CEEEEEcCCHHHHHHHHHhccCCCcEEEEecC-------------CCce---------eccCCHHHHHHHHHHHHcC
Confidence 789999999999998764 8899988531 1232 2356688999999999864
No 188
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.82 E-value=49 Score=30.03 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=37.2
Q ss_pred hhcccccChhHHHHHHH----hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW----NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~----~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|+. +++|++++- .|- + +-...++++++.+++++++++
T Consensus 65 d~vi~lGGDGT~L~aa~~~~~~~~Pilgin----------------~G~-l-----GFl~~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 65 DLAIVVGGDGNMLGAARVLARYDIKVIGIN----------------RGN-L-----GFLTDLDPDNALQQLSDVLEG 119 (292)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCeEEEEE----------------CCC-C-----CcccccCHHHHHHHHHHHHcC
Confidence 78999999999999975 368888773 231 1 012346689999999999864
No 189
>PLN02929 NADH kinase
Probab=37.72 E-value=50 Score=30.07 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=41.0
Q ss_pred hhcccccChhHHHHHHHh---CceEEeccCCcc------hhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 234 GGFLTYCGWNSVTKAMWN---GVQVLAWPQHGD------QKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~---GVP~l~~P~~~D------Q~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
+++|+-||=||++.|.+. ++|++++=.... ++.|.-. +..-.|.- -.++.+++.++|.+++
T Consensus 66 Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r~lGfL---------~~~~~~~~~~~L~~il 135 (301)
T PLN02929 66 DLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARRSTGHL---------CAATAEDFEQVLDDVL 135 (301)
T ss_pred CEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cccCcccc---------ccCCHHHHHHHHHHHH
Confidence 789999999999998654 689988754321 1111110 11123322 3567899999999999
Q ss_pred CC
Q 043530 305 GN 306 (343)
Q Consensus 305 ~~ 306 (343)
.+
T Consensus 136 ~g 137 (301)
T PLN02929 136 FG 137 (301)
T ss_pred cC
Confidence 64
No 190
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=37.60 E-value=23 Score=32.15 Aligned_cols=29 Identities=14% Similarity=0.059 Sum_probs=23.6
Q ss_pred EEEEcCC--CccChHHHHHHHHHHHHCCCCC
Q 043530 13 FALLSSS--GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 13 il~~~~p--~~GH~~p~l~La~~L~~rGh~V 41 (343)
|+++... ..|+......|++.|.++||+|
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v 32 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQV 32 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceE
Confidence 4555433 4688999999999999999999
No 191
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=37.51 E-value=41 Score=27.76 Aligned_cols=35 Identities=9% Similarity=0.045 Sum_probs=24.2
Q ss_pred cCCCCCCEEEECCCCccc-hHHHHHHcCCCcEEEec
Q 043530 56 LSSPPLSAPVTDMTLTAS-VLPISRAINVPNYIFFT 90 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~-~~~~A~~lgiP~v~~~~ 90 (343)
+..++||+||........ .....+..|||++.+..
T Consensus 65 ll~l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 65 IVALKPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred HhccCCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 567799999986623222 44456789999887753
No 192
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=37.24 E-value=1e+02 Score=25.09 Aligned_cols=19 Identities=21% Similarity=0.129 Sum_probs=16.2
Q ss_pred hhHHHHHHHhCceEEeccC
Q 043530 242 WNSVTKAMWNGVQVLAWPQ 260 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~ 260 (343)
.+++.+|...++|+|++.-
T Consensus 75 ~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 75 LNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred HHHHHHHHHcCCCEEEEec
Confidence 4678899999999999963
No 193
>COG3560 FMR2 Predicted oxidoreductase related to nitroreductase [General function prediction only]
Probab=37.02 E-value=54 Score=27.18 Aligned_cols=102 Identities=15% Similarity=0.281 Sum_probs=71.0
Q ss_pred hhhhcCCCCceeEEeccCCccCCHHHHHHHHH---------------hhcccccC-----hhHHHHHHHhCceEEeccCC
Q 043530 202 AWLDDQATGSVVDVSFGSRTAMSREQLRELGD---------------GGFLTYCG-----WNSVTKAMWNGVQVLAWPQH 261 (343)
Q Consensus 202 ~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---------------~~fvtHgG-----~~s~~eal~~GVP~l~~P~~ 261 (343)
.+++.-+.+..|| ++|-....+.+.++++.. +++|-+|- |+-+-+.|..-||-=.++-
T Consensus 5 ~~~~ai~~RRTiY-aL~k~lp~~~e~i~~~v~~avk~tPsaFNSQssR~ViL~gd~h~KlWdivk~~l~~ivp~~~f~~- 82 (200)
T COG3560 5 TFLNAIENRRTIY-ALKKNLPVSDEEIKEIVKEAVKHTPSAFNSQSSRVVILFGDEHDKLWDIVKDELRAIVPAEAFEA- 82 (200)
T ss_pred HHHHHHHhhhhHh-hcCCCCCCcHHHHHHHHHHHHhcCCcccccCCceEEEEeccchHHHHHHHHHHHHHhcccccccc-
Confidence 3555555667788 788777777787877765 77887776 7888889999777655332
Q ss_pred cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 043530 262 GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREE 319 (343)
Q Consensus 262 ~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~ 319 (343)
.+|..++. +.|.|..| -.+.+.+.+.+++=+ +.|..|=-.|++.
T Consensus 83 t~~ki~~f---~ag~GtVL---------FfeDq~Vv~~LQeqf--plYadnFPvwseq 126 (200)
T COG3560 83 TERKIDSF---KAGYGTVL---------FFEDQNVVKGLQEQF--PLYADNFPVWSEQ 126 (200)
T ss_pred cccccchh---hhccceEE---------EEecchHHHHHHHHh--HHHHhhCcchhhh
Confidence 24444443 45899888 456677777777766 7777777666665
No 194
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=36.99 E-value=40 Score=34.84 Aligned_cols=100 Identities=18% Similarity=0.124 Sum_probs=52.4
Q ss_pred CHHHHHHHHH--hhcccc---cChh-HHHHHHHhCce---EEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHH
Q 043530 224 SREQLRELGD--GGFLTY---CGWN-SVTKAMWNGVQ---VLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGE 294 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvtH---gG~~-s~~eal~~GVP---~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~ 294 (343)
+.+++.++-. ++|+.- -|+| ..+||+++|+| .+++.-+.- -+. +..-|+.++ .-..+
T Consensus 351 ~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G---~~~---~l~~~llv~--------P~d~~ 416 (726)
T PRK14501 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAG---AAA---ELAEALLVN--------PNDIE 416 (726)
T ss_pred CHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccc---hhH---HhCcCeEEC--------CCCHH
Confidence 3444444332 444432 3544 56799999664 222221111 011 111266663 34689
Q ss_pred HHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 295 QIAENISEMMGNE--LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 295 ~l~~ai~~vl~~~--~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+++++|.++|.++ +.+++.+++.+.++ .-+...-+++|++.+.
T Consensus 417 ~la~ai~~~l~~~~~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 417 GIAAAIKRALEMPEEEQRERMQAMQERLR-----RYDVHKWASDFLDELR 461 (726)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 9999999999743 44444444433332 3456666666666553
No 195
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.88 E-value=3.8e+02 Score=25.58 Aligned_cols=153 Identities=18% Similarity=0.166 Sum_probs=93.0
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCCCcchHhhhcccCCCcCCCCCCEEEECCCCccchHH----HHHHcCCCcEE
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKSPENHVTSSLSLLPSLSSPPLSAPVTDMTLTASVLP----ISRAINVPNYI 87 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V~~~~i~~~~~~l~~l~~~~~D~vi~D~~~~~~~~~----~A~~lgiP~v~ 87 (343)
-|.|+-.=+.|-..-+-.||..+.++|.. +-+|..|. |-..+.+ -|.+.+||++.
T Consensus 103 VimfVGLqG~GKTTtc~KlA~y~kkkG~K--------------------~~LvcaDT-FRagAfDQLkqnA~k~~iP~yg 161 (483)
T KOG0780|consen 103 VIMFVGLQGSGKTTTCTKLAYYYKKKGYK--------------------VALVCADT-FRAGAFDQLKQNATKARVPFYG 161 (483)
T ss_pred EEEEEeccCCCcceeHHHHHHHHHhcCCc--------------------eeEEeecc-cccchHHHHHHHhHhhCCeeEe
Confidence 35555555889999999999999999954 77888898 6545544 48888999765
Q ss_pred EecccHHHHHHHHhhhcccccCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccc-
Q 043530 88 FFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEG- 166 (343)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~- 166 (343)
-.+-. + | .....+.. ..+ ...+.|.+|+.|.-.+.-
T Consensus 162 syte~---------------------------------d--p------v~ia~egv-~~f-Kke~fdvIIvDTSGRh~qe 198 (483)
T KOG0780|consen 162 SYTEA---------------------------------D--P------VKIASEGV-DRF-KKENFDVIIVDTSGRHKQE 198 (483)
T ss_pred ccccc---------------------------------c--h------HHHHHHHH-HHH-HhcCCcEEEEeCCCchhhh
Confidence 22110 0 0 00000000 111 123578888888765432
Q ss_pred -hhHHhhhcCCccCCCCcEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----hhcccc-
Q 043530 167 -KTLAELNGGKVIEGLPLVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD-----GGFLTY- 239 (343)
Q Consensus 167 -~~~~~~~~~~~~~~~p~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~-----~~fvtH- 239 (343)
..++.+++. -+.-.|.-+|||-=+|+.+--.+|.+++-+ .+.+|-
T Consensus 199 ~sLfeEM~~v----------------------------~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlTKl 250 (483)
T KOG0780|consen 199 ASLFEEMKQV----------------------------SKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVILTKL 250 (483)
T ss_pred HHHHHHHHHH----------------------------HhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEEEEec
Confidence 222222211 112234568898777777767777777765 555553
Q ss_pred ------cChhHHHHHHHhCceEEec
Q 043530 240 ------CGWNSVTKAMWNGVQVLAW 258 (343)
Q Consensus 240 ------gG~~s~~eal~~GVP~l~~ 258 (343)
||.-|..+|. +.|++-+
T Consensus 251 DGhakGGgAlSaVaaT--ksPIiFI 273 (483)
T KOG0780|consen 251 DGHAKGGGALSAVAAT--KSPIIFI 273 (483)
T ss_pred ccCCCCCceeeehhhh--CCCEEEE
Confidence 6777888777 8898887
No 196
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=36.83 E-value=25 Score=31.92 Aligned_cols=30 Identities=20% Similarity=-0.012 Sum_probs=24.5
Q ss_pred eEEEEcCCC----ccChHHHHHHHHHHHHCCCCC
Q 043530 12 LFALLSSSG----MGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 12 ~il~~~~p~----~GH~~p~l~La~~L~~rGh~V 41 (343)
||++++... .|+-.....|++.|+++||+|
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v 34 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEV 34 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceE
Confidence 356665542 489999999999999999999
No 197
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=36.05 E-value=40 Score=31.40 Aligned_cols=97 Identities=10% Similarity=0.113 Sum_probs=56.2
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH-HHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE-LLRIQ 312 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~-~~r~~ 312 (343)
++.||-- .....|.+..++|++-...-.|..... .|.-...... .-+...-+.++|.++|++++.++ .++++
T Consensus 271 DiLITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~-----rg~~~~~~~~-~pg~~~~~~~eL~~~i~~~~~~~~~~~~~ 343 (369)
T PF04464_consen 271 DILITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKE-----RGFYFDYEED-LPGPIVYNFEELIEAIENIIENPDEYKEK 343 (369)
T ss_dssp SEEEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----SSBSS-TTTS-SSS-EESSHHHHHHHHTTHHHHHHHTHHH
T ss_pred CEEEEec-hhHHHHHHHhCCCEEEEeccHHHHhhc-----cCCCCchHhh-CCCceeCCHHHHHHHHHhhhhCCHHHHHH
Confidence 8888886 335679999999999877655544221 2333222100 00123457899999999998754 45666
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHH
Q 043530 313 EMRIREEARTAIEQGGSLKKRLTELV 338 (343)
Q Consensus 313 a~~l~~~~~~a~~~gg~~~~~~~~~~ 338 (343)
-++..+.+-. ..+|.++++-++.++
T Consensus 344 ~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 344 REKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp HHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 6666666644 366777777666654
No 198
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=36.02 E-value=87 Score=24.92 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=15.9
Q ss_pred hhHHHHHHHhCceEEeccC
Q 043530 242 WNSVTKAMWNGVQVLAWPQ 260 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~ 260 (343)
.+.+.+|...++|+|++.-
T Consensus 75 ~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 75 VTGLANAYLDSIPLLVITG 93 (155)
T ss_pred HHHHHHHHhhCCCEEEEeC
Confidence 4677899999999999963
No 199
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=35.01 E-value=1.6e+02 Score=28.95 Aligned_cols=72 Identities=19% Similarity=0.298 Sum_probs=46.0
Q ss_pred cChhHHHHHHHhCceEEeccCCc------chhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 240 CGWNSVTKAMWNGVQVLAWPQHG------DQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 240 gG~~s~~eal~~GVP~l~~P~~~------DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
||. |-++|+++|.+-|+.+..+ |-..+. ....|.|.... ..++++++.++++.+. -|+.+.
T Consensus 381 cGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~--------~~~~~~l~~al~rA~~--~y~~~~ 447 (487)
T COG0297 381 CGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFL--------QTNPDHLANALRRALV--LYRAPP 447 (487)
T ss_pred CcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEe--------cCCHHHHHHHHHHHHH--HhhCCH
Confidence 665 5578999999888888755 222222 34457777772 2399999999998773 344333
Q ss_pred HHHHHHHHHHH
Q 043530 314 MRIREEARTAI 324 (343)
Q Consensus 314 ~~l~~~~~~a~ 324 (343)
..++...+.++
T Consensus 448 ~~w~~~~~~~m 458 (487)
T COG0297 448 LLWRKVQPNAM 458 (487)
T ss_pred HHHHHHHHhhc
Confidence 33444444444
No 200
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=35.01 E-value=23 Score=33.16 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=25.0
Q ss_pred cCCCCCCEEEE--CCCCccchHHHHHHcCCCcEEEe
Q 043530 56 LSSPPLSAPVT--DMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 56 l~~~~~D~vi~--D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
+++.+||+|++ |.+-+..+..+|.++|||++.+.
T Consensus 89 ~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hve 124 (365)
T TIGR03568 89 FERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIH 124 (365)
T ss_pred HHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEE
Confidence 34458999887 56445567889999999988553
No 201
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.98 E-value=58 Score=28.89 Aligned_cols=51 Identities=18% Similarity=0.160 Sum_probs=37.1
Q ss_pred hhcccccChhHHHHHHH-hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMW-NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~-~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|++ +++|++++- .| ++ +-...++.+++.+++.+++.+
T Consensus 43 d~vi~iGGDGT~L~a~~~~~~Pilgin----------------~G-~l-----Gfl~~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 43 DLIIVVGGDGTVLKAAKKVGTPLVGFK----------------AG-RL-----GFLSSYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CEEEEECCcHHHHHHHHHcCCCEEEEe----------------CC-CC-----ccccccCHHHHHHHHHHHHcC
Confidence 77999999999999877 578887763 23 12 123356778888999888753
No 202
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.97 E-value=47 Score=29.84 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=35.4
Q ss_pred hhcccccChhHHHHHHHh---CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN---GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~---GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|.-||=||+++++.. ++|++++|... .| -...+.++++.+++.+++.+
T Consensus 59 d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~G~-------------lG---------Fl~~~~~~~~~~~l~~i~~g 112 (277)
T PRK03708 59 DFIIAIGGDGTILRIEHKTKKDIPILGINMGT-------------LG---------FLTEVEPEETFFALSRLLEG 112 (277)
T ss_pred CEEEEEeCcHHHHHHHHhcCCCCeEEEEeCCC-------------CC---------ccccCCHHHHHHHHHHHHcC
Confidence 689999999999998843 56888887321 11 12345577788888777753
No 203
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.73 E-value=50 Score=33.09 Aligned_cols=51 Identities=20% Similarity=0.258 Sum_probs=38.5
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+-||=||++.|.+. ++|++++- .|. + +-...++++++.++|.+++.+
T Consensus 350 dlvi~lGGDGT~L~aa~~~~~~~~PilGin----------------~G~-l-----GFL~~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 350 SHIISIGGDGTVLRASKLVNGEEIPIICIN----------------MGT-V-----GFLTEFSKEEIFKAIDSIISG 404 (569)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEc----------------CCC-C-----CcCcccCHHHHHHHHHHHHcC
Confidence 899999999999999774 78988873 331 1 112356789999999999864
No 204
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.83 E-value=60 Score=29.47 Aligned_cols=51 Identities=18% Similarity=0.201 Sum_probs=37.8
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||+++++.. ++|++++.. |- + +-...++.+++.++|.+++.+
T Consensus 64 d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~----------------G~-l-----GFl~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 64 DLVIVVGGDGSLLGAARALARHNVPVLGINR----------------GR-L-----GFLTDIRPDELEFKLAEVLDG 118 (295)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCCEEEEeC----------------Cc-c-----cccccCCHHHHHHHHHHHHcC
Confidence 678999999999998753 678888753 21 2 113456789999999999863
No 205
>PLN02846 digalactosyldiacylglycerol synthase
Probab=32.75 E-value=42 Score=32.66 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=26.1
Q ss_pred CCCceEEEEcCCC----ccChHHHHHHHHHHHHCC-CCC
Q 043530 8 KPSRLFALLSSSG----MGHLTPFLRLAALLTAHH-VKS 41 (343)
Q Consensus 8 ~~~~~il~~~~p~----~GH~~p~l~La~~L~~rG-h~V 41 (343)
.+++||++++-.. .|=..-.+.++..|+++| |+|
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV 40 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREV 40 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEE
Confidence 3579999998653 366456677777999999 798
No 206
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=32.40 E-value=31 Score=26.65 Aligned_cols=73 Identities=7% Similarity=-0.006 Sum_probs=44.8
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc--c---h-----H---------------hhhcccCCC-cCCCCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS---PE--N---H-----V---------------TSSLSLLPS-LSSPPLS 62 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~--~---~-----i---------------~~~~~~l~~-l~~~~~D 62 (343)
||++++-....| ...+++.|.++||+| +. + . + -... .+.. +++.+||
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~~k~~~~~~~~~-~l~k~ik~~~~D 76 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSPRKSPLNYIKYF-RLRKIIKKEKPD 76 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCCCCccHHHHHHH-HHHHHhccCCCC
Confidence 467777766666 468899999999999 11 0 0 0 0111 2333 6777999
Q ss_pred EEEECCCCc--cchHHHHHHcC-CCcEEE
Q 043530 63 APVTDMTLT--ASVLPISRAIN-VPNYIF 88 (343)
Q Consensus 63 ~vi~D~~~~--~~~~~~A~~lg-iP~v~~ 88 (343)
+|.+-.... ..+..+++..+ +|.+..
T Consensus 77 vIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 77 VIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred EEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 997665122 12334567788 887743
No 207
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=32.35 E-value=8.3 Score=32.57 Aligned_cols=61 Identities=11% Similarity=0.246 Sum_probs=39.0
Q ss_pred CccChHHHHHHHH-HHHHCCCCCCcchHhhhcccCCCcCCCCCCEEEECCCCc--------cchHHHHHHcCCCcEEE
Q 043530 20 GMGHLTPFLRLAA-LLTAHHVKSPENHVTSSLSLLPSLSSPPLSAPVTDMTLT--------ASVLPISRAINVPNYIF 88 (343)
Q Consensus 20 ~~GH~~p~l~La~-~L~~rGh~V~~~~i~~~~~~l~~l~~~~~D~vi~D~~~~--------~~~~~~A~~lgiP~v~~ 88 (343)
..||+.|+.+--. -|.++||. +.+.+ |-.+..++|-.|||+. +. .-+...|++.|+|.+..
T Consensus 122 ~PGHVfpL~A~~ggVl~R~GHT------EasVd-LarlAGl~Pa~VicEi-~~~dG~mar~~~~~~fa~~h~l~~iti 191 (203)
T COG0108 122 RPGHVFPLRAKDGGVLERRGHT------EAAVD-LARLAGLKPAGVICEI-MNDDGTMARLPELEEFAKEHGLPVITI 191 (203)
T ss_pred CCCCeeeeeeccCCeeccCChH------HHHHH-HHHHcCCCCcEEEEEE-eCCCccccChHHHHHHHHHcCCcEEEH
Confidence 4588888776554 45677876 11111 1115677888899876 43 22456899999998753
No 208
>cd00453 FTBP_aldolase_II Fructose/tagarose-bisphosphate aldolase class II. This family includes fructose-1,6-bisphosphate (FBP) and tagarose 1,6-bisphosphate (TBP) aldolases. FBP-aldolase is homodimeric and used in gluconeogenesis and glycolysis; the enzyme controls the condensation of dihydroxyacetone phosphate with glyceraldehyde-3-phosphate to yield fructose-1,6-bisphosphate. TBP-aldolase is tetrameric and produces tagarose-1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. Although structurally similar, the class I aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=32.23 E-value=2.6e+02 Score=25.97 Aligned_cols=78 Identities=14% Similarity=0.019 Sum_probs=44.0
Q ss_pred chhhhcCCCCc---eeEEeccCCc--------cCCHHHHHHHHHhh------------cccccChhHHHHHHHhCceEEe
Q 043530 201 LAWLDDQATGS---VVDVSFGSRT--------AMSREQLRELGDGG------------FLTYCGWNSVTKAMWNGVQVLA 257 (343)
Q Consensus 201 ~~wl~~~~~~~---vVyvs~GS~~--------~~~~~~~~~l~~~~------------fvtHgG~~s~~eal~~GVP~l~ 257 (343)
.+|.+....-+ .+=+||||.- .+..+.++++...+ +|-|||.|+..
T Consensus 187 ~~Fv~~Tg~i~pvD~LAvsiGt~HG~Yk~g~p~L~~~~L~~i~~~~~~~~gl~~~~~pLVlHGgSG~~~----------- 255 (340)
T cd00453 187 DYAYTELSKISPRFTIAASFGNVHGVYKKGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTA----------- 255 (340)
T ss_pred HHHHHHhCCCCcceEEeeecCccccCCCCCCCccCHHHHHHHHHHHHhhcccCCCCCceEEeCCCCCCH-----------
Confidence 66776543211 2339999863 25566777776533 57788876542
Q ss_pred ccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 258 WPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 258 ~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
...+++.+.|+... +..+-......+++++.+
T Consensus 256 --------e~~~~ai~~Gi~Ki-------Ni~Te~~~A~~~~~~~~~ 287 (340)
T cd00453 256 --------QEIKDSVSYGVVKM-------NIDTDTQWATWEGVLNYY 287 (340)
T ss_pred --------HHHHHHHHcCCeEE-------EcccHHHHHHHHHHHHHH
Confidence 33445556666633 234444555555666655
No 209
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.22 E-value=42 Score=30.09 Aligned_cols=50 Identities=6% Similarity=0.057 Sum_probs=35.9
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
+++|+=||=||++.|.+. ++|++++-.. .+|. ...++++++.+.+.+++.
T Consensus 44 d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G-------------~lGF---------L~~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 44 QLAIVIGGDGNMLGRARVLAKYDIPLIGINRG-------------NLGF---------LTDIDPKNAYEQLEACLE 97 (272)
T ss_pred CEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------CCcc---------cccCCHHHHHHHHHHHHh
Confidence 789999999999988653 6898887321 1332 234677888888888886
No 210
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=32.12 E-value=64 Score=27.19 Aligned_cols=33 Identities=6% Similarity=0.078 Sum_probs=24.9
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+|| .|+.--..+..-|.++|||.|.+..+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 688755 476444457788999999999988664
No 211
>PRK13604 luxD acyl transferase; Provisional
Probab=31.62 E-value=65 Score=29.44 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=28.0
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++...++++.+..++-.-+..+|+.|+++|+.|
T Consensus 35 ~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~v 67 (307)
T PRK13604 35 KKNNTILIASGFARRMDHFAGLAEYLSSNGFHV 67 (307)
T ss_pred CCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEE
Confidence 355678888888888777999999999999998
No 212
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=31.56 E-value=57 Score=25.08 Aligned_cols=30 Identities=13% Similarity=-0.030 Sum_probs=28.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|+++.+.++-.|-.-..-++..|...|++|
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~v 30 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEV 30 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEE
Confidence 689999999999999999999999999998
No 213
>PRK00654 glgA glycogen synthase; Provisional
Probab=31.48 E-value=48 Score=32.14 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=46.4
Q ss_pred CcEEEeccCCCCCCCCC--CcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH---hhcccccChhH-HHHHHHhCceE
Q 043530 182 PLVIPIGLLPLYGFEKS--QPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD---GGFLTYCGWNS-VTKAMWNGVQV 255 (343)
Q Consensus 182 p~v~~VGpl~~~~~~~~--~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---~~fvtHgG~~s-~~eal~~GVP~ 255 (343)
+-+.+||-+.....-+. +...-+... .+-++=.|+....-.+++++++. .-+....|+.. ....++.+-=+
T Consensus 283 ~~i~~vGRl~~~KG~~~li~a~~~l~~~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 283 PLFAMVSRLTEQKGLDLVLEALPELLEQ---GGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred cEEEEeeccccccChHHHHHHHHHHHhc---CCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 45778888765422111 111112211 22333336432212345555554 11333466653 34578889999
Q ss_pred EeccCCcchhHHHHHHHHhcce
Q 043530 256 LAWPQHGDQKINADVVERTGMG 277 (343)
Q Consensus 256 l~~P~~~DQ~~na~~v~~~G~G 277 (343)
+++|-..|-+.+. .++....|
T Consensus 360 ~v~PS~~E~~gl~-~lEAma~G 380 (466)
T PRK00654 360 FLMPSRFEPCGLT-QLYALRYG 380 (466)
T ss_pred EEeCCCCCCchHH-HHHHHHCC
Confidence 9999777765554 34444555
No 214
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=31.42 E-value=29 Score=30.85 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=24.9
Q ss_pred CCCEE-EECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAP-VTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~v-i~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+| |.|+.--..+..-|.++|||.|.+.-+.
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn 190 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTN 190 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCC
Confidence 58875 5577445557889999999999987664
No 215
>PF11740 KfrA_N: Plasmid replication region DNA-binding N-term; InterPro: IPR021104 The KfrA family of protiens are encoded on plasmids, generally in or near gene clusters invloved in stable inheritance functions. These proteins are thought to form an all-helical structure, consisting of an N-terminal helix-turn-helix DNA binding domain and an extended coiled-coil tail. The best-characterised KfrA protein, encoded on the broad host-range Plasmid RK2, is a site-specific DNA-binding protein whose operator overlaps its own promoter. The DNA-binding domain is essential for function, while the coiled-coil domain is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning []. This entry represents the N-terminal DNA-binding domain.
Probab=31.21 E-value=65 Score=24.53 Aligned_cols=45 Identities=18% Similarity=0.393 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 291 MKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 291 ~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+|.++|.++..+++.... +-++..+.+.+ |++|...+..+++.++
T Consensus 1 IT~e~V~~Aa~~L~~~G~-~pT~~~Vr~~l------G~GS~~ti~~~l~~w~ 45 (120)
T PF11740_consen 1 ITYEDVIEAADELLAAGK-KPTVRAVRERL------GGGSMSTISKHLKEWR 45 (120)
T ss_pred CcHHHHHHHHHHHHHcCC-CCCHHHHHHHH------CCCCHHHHHHHHHHHH
Confidence 467777777777774111 33444444444 3455666666666553
No 216
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=30.87 E-value=73 Score=26.91 Aligned_cols=33 Identities=12% Similarity=-0.099 Sum_probs=30.9
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.+.++++.+.++--|-....-++..|..+|++|
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~v 115 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDV 115 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEE
Confidence 467999999999999999999999999999998
No 217
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=30.78 E-value=2.7e+02 Score=25.96 Aligned_cols=57 Identities=9% Similarity=0.062 Sum_probs=45.3
Q ss_pred ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 239 YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 239 HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
.-|.|++.-.+..|+|++.- .+...-.-+.+.|+-+-- ..+.++...|+++=+++..
T Consensus 276 QQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf------~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 276 QQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLF------YGDELDEALVREAQRQLAN 332 (360)
T ss_pred hhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEe------ccccCCHHHHHHHHHHHhh
Confidence 36899999999999999874 444445556667877766 5689999999999998875
No 218
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=30.40 E-value=4.3e+02 Score=24.25 Aligned_cols=62 Identities=19% Similarity=0.306 Sum_probs=43.3
Q ss_pred cccChhHHHHHHHhCceEEeccCC-cchhHHHHHHHH-----hcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 238 TYCGWNSVTKAMWNGVQVLAWPQH-GDQKINADVVER-----TGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 238 tHgG~~s~~eal~~GVP~l~~P~~-~DQ~~na~~v~~-----~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
-||||-.++-|++.|.-++.+|-. .|......++++ .+.++.+- ..+..+.+++++.+++-+
T Consensus 170 R~~G~LA~~~ala~ga~~iliPE~~~~~~~~~~~i~~~~~~g~~~~vivv-----aEG~~~~~~l~~~l~~~~ 237 (317)
T cd00763 170 RHCGDIALAAGIAGGAEFIVIPEAEFDREEVANRIKAGIERGKKHAIVVV-----AEGVYDVDELAKEIEEAT 237 (317)
T ss_pred CChHHHHHHHHHHcCCCEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-----eCCCCCHHHHHHHHHHHh
Confidence 489999999999999999999953 455555555543 35665553 233456778888887765
No 219
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=30.20 E-value=62 Score=24.54 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=41.6
Q ss_pred ChHHHHHHHHHHHHCCCCC--Cc---chHhh-------h--c--------ccCCC-cCCCCCCEEEECCCC--------c
Q 043530 23 HLTPFLRLAALLTAHHVKS--PE---NHVTS-------S--L--------SLLPS-LSSPPLSAPVTDMTL--------T 71 (343)
Q Consensus 23 H~~p~l~La~~L~~rGh~V--~~---~~i~~-------~--~--------~~l~~-l~~~~~D~vi~D~~~--------~ 71 (343)
+-.=++.+++.|.+.|.++ |+ +++.. . . +.+.+ +++-++|+||.-+.- .
T Consensus 11 dk~~~~~~a~~l~~~G~~i~aT~gTa~~L~~~gi~~~~v~~~~~~~~~~~~~i~~~i~~~~idlVIn~~~~~~~~~~~~~ 90 (116)
T cd01423 11 SKPELLPTAQKLSKLGYKLYATEGTADFLLENGIPVTPVAWPSEEPQNDKPSLRELLAEGKIDLVINLPSNRGKRVLDND 90 (116)
T ss_pred cchhHHHHHHHHHHCCCEEEEccHHHHHHHHcCCCceEeeeccCCCCCCchhHHHHHHcCCceEEEECCCCCCCccccCc
Confidence 4456889999999999999 43 22210 0 0 11222 456689999984410 2
Q ss_pred cchHHHHHHcCCCcE
Q 043530 72 ASVLPISRAINVPNY 86 (343)
Q Consensus 72 ~~~~~~A~~lgiP~v 86 (343)
+.....|-.+|||++
T Consensus 91 ~~iRr~Av~~~ip~i 105 (116)
T cd01423 91 YVMRRAADDFAVPLI 105 (116)
T ss_pred EeeehhhHhhCCccc
Confidence 445668889999986
No 220
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=29.85 E-value=2.9e+02 Score=23.26 Aligned_cols=80 Identities=10% Similarity=0.112 Sum_probs=49.2
Q ss_pred eccCCcchhHHHHHHHHh-cceeee----e-ccCC-CCcCcccHHHHH----HHHHHHhCCHHHHHHHHHHHHHHHHHH-
Q 043530 257 AWPQHGDQKINADVVERT-GMGIWV----Q-SWGW-GGEAIMKGEQIA----ENISEMMGNELLRIQEMRIREEARTAI- 324 (343)
Q Consensus 257 ~~P~~~DQ~~na~~v~~~-G~G~~l----~-~~~~-~~~~~~t~~~l~----~ai~~vl~~~~~r~~a~~l~~~~~~a~- 324 (343)
+.|..-||......+.+. -+|+.= + +.++ ........+.|+ +.|.++|.|+.+-+|-+++.+.+.+|-
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~~IIRnr~KI~Avi~NA~~ 101 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARA 101 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCchhHHhHHHHHHHHHHHHH
Confidence 456788988888886554 666542 1 1000 113456666666 678889999888777777777666542
Q ss_pred -----hcCCCHHHHHHH
Q 043530 325 -----EQGGSLKKRLTE 336 (343)
Q Consensus 325 -----~~gg~~~~~~~~ 336 (343)
.++||-...+=.
T Consensus 102 ~l~i~~e~gSf~~ylW~ 118 (187)
T PRK10353 102 YLQMEQNGEPFADFVWS 118 (187)
T ss_pred HHHHHHhcCCHHHHHhh
Confidence 345654444433
No 221
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=29.68 E-value=47 Score=27.46 Aligned_cols=22 Identities=32% Similarity=0.187 Sum_probs=18.7
Q ss_pred hhHHHHHHHhCceEEeccCCcc
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGD 263 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~D 263 (343)
-++++||+++|+|+|+-+..+.
T Consensus 195 ~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 195 GLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred ChHHHHHHhCCCCEEEcCCCCc
Confidence 5889999999999999876543
No 222
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=29.66 E-value=3.1e+02 Score=24.67 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=26.6
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHC--CCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAH--HVKS 41 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~r--Gh~V 41 (343)
||+++-....|++.-..++.+.|+++ +.++
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I 32 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEI 32 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999997 6665
No 223
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=29.53 E-value=44 Score=28.13 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=19.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKSP 42 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~ 42 (343)
|||.++.. .|++- -.|.++..+|||+||
T Consensus 1 mKIaiIgA--sG~~G--s~i~~EA~~RGHeVT 28 (211)
T COG2910 1 MKIAIIGA--SGKAG--SRILKEALKRGHEVT 28 (211)
T ss_pred CeEEEEec--CchhH--HHHHHHHHhCCCeeE
Confidence 46777654 44442 357899999999994
No 224
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=29.07 E-value=77 Score=27.37 Aligned_cols=84 Identities=19% Similarity=0.085 Sum_probs=52.3
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCCCc---chH-----hhhcccCCC-------------c-CCCCCCEEEECCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKSPE---NHV-----TSSLSLLPS-------------L-SSPPLSAPVTDMT 69 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V~~---~~i-----~~~~~~l~~-------------l-~~~~~D~vi~D~~ 69 (343)
-|.+.-+|+.|-..-.-.||++|.+++|+|.. ++. .++.+.+.. + ..++--+||+|..
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DEslpi~ke~yres~~ks~~rlldSalkn~~VIvDdt 82 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDESLPILKEVYRESFLKSVERLLDSALKNYLVIVDDT 82 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccchhhhhheecccccchHHHHHHHHHHHHHHHHHHHHhcceEEEEecc
Confidence 35666778999999999999999999999932 221 112211111 1 1123458999973
Q ss_pred Cccch-----HHHHHHcCCCcEEEecccHHH
Q 043530 70 LTASV-----LPISRAINVPNYIFFTSSAKM 95 (343)
Q Consensus 70 ~~~~~-----~~~A~~lgiP~v~~~~~~~~~ 95 (343)
-++-+ .-.|..+..+|.++..-.+..
T Consensus 83 NYyksmRrqL~ceak~~~tt~ciIyl~~plD 113 (261)
T COG4088 83 NYYKSMRRQLACEAKERKTTWCIIYLRTPLD 113 (261)
T ss_pred cHHHHHHHHHHHHHHhcCCceEEEEEccCHH
Confidence 33222 346778889987665554433
No 225
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=29.06 E-value=60 Score=21.40 Aligned_cols=53 Identities=11% Similarity=0.220 Sum_probs=32.7
Q ss_pred CcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 287 GEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 287 ~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+.+.++.+++...++.+.....-...-..+...++ .....++...+++||++.
T Consensus 13 ~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 13 GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFR-EFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHH-HHTTTSSSSEEHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHH-HhCCCCcCCCcHHHHhcc
Confidence 56789999999999888752222222223333333 335566667788887753
No 226
>PRK10307 putative glycosyl transferase; Provisional
Probab=28.70 E-value=59 Score=30.65 Aligned_cols=31 Identities=10% Similarity=-0.096 Sum_probs=21.8
Q ss_pred ceEEEEcC---CCcc-ChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSS---SGMG-HLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~---p~~G-H~~p~l~La~~L~~rGh~V 41 (343)
+||++++. |-.| =-.-...|+++|.++||+|
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V 35 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEV 35 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeE
Confidence 57888873 3222 1123579999999999999
No 227
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=28.69 E-value=73 Score=27.02 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=25.5
Q ss_pred CCCE-EEECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSA-PVTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~-vi~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+ ||.|+.--.-+..-|.++|||.|.++-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 4886 55588555567889999999999987664
No 228
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=28.32 E-value=93 Score=28.37 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=30.0
Q ss_pred CHHHHHHHHH-------hhcccccChhHHHHHHH----hCceEEeccCCcc
Q 043530 224 SREQLRELGD-------GGFLTYCGWNSVTKAMW----NGVQVLAWPQHGD 263 (343)
Q Consensus 224 ~~~~~~~l~~-------~~fvtHgG~~s~~eal~----~GVP~l~~P~~~D 263 (343)
+++..+++++ +.+|.=||-+|..-|.. +++|++++|-.-|
T Consensus 76 ~~~~~~~~~~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 76 TEEGRQKAVENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 3455555544 89999999998876643 7999999997666
No 229
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=28.21 E-value=77 Score=31.06 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=37.5
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||++.|.+. ++|++++-+. .+|. ...++.+++.++|.+++.+
T Consensus 264 DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~G-------------~LGF---------Lt~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 264 DLVITLGGDGTVLWAASMFKGPVPPVVPFSMG-------------SLGF---------MTPFHSEQYRDCLDAILKG 318 (508)
T ss_pred CEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------Ccce---------ecccCHHHHHHHHHHHHcC
Confidence 899999999999999774 5687776210 1222 2356789999999999864
No 230
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=28.13 E-value=2.8e+02 Score=25.23 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=34.0
Q ss_pred chhhhcCCCCceeEEeccCCc---cCCHHHHHHHHH--------hh-cccccChhHHHHHHHh
Q 043530 201 LAWLDDQATGSVVDVSFGSRT---AMSREQLRELGD--------GG-FLTYCGWNSVTKAMWN 251 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~---~~~~~~~~~l~~--------~~-fvtHgG~~s~~eal~~ 251 (343)
.+|+-+.+-++++. .||.. .++.++-.++++ ++ +|.+.|.|++.||+..
T Consensus 31 v~~li~~Gv~gi~~--~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g~~~t~eai~l 91 (299)
T COG0329 31 VEFLIAAGVDGLVV--LGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVGSNSTAEAIEL 91 (299)
T ss_pred HHHHHHcCCCEEEE--CCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecCCCcHHHHHHH
Confidence 56776665444444 46654 578887777765 33 8999999999999754
No 231
>KOG3125 consensus Thymidine kinase [Nucleotide transport and metabolism]
Probab=27.87 E-value=2.3e+02 Score=24.14 Aligned_cols=48 Identities=21% Similarity=0.159 Sum_probs=36.8
Q ss_pred hhcccccChhHHH--------------HHHHhCceEEecc---CCcchhHHHHHHHH-hcceeeee
Q 043530 234 GGFLTYCGWNSVT--------------KAMWNGVQVLAWP---QHGDQKINADVVER-TGMGIWVQ 281 (343)
Q Consensus 234 ~~fvtHgG~~s~~--------------eal~~GVP~l~~P---~~~DQ~~na~~v~~-~G~G~~l~ 281 (343)
+.++||+|..... +++...|-+|.+= ||.||.+..+.+.+ .|.-+.+.
T Consensus 72 ~si~Thdg~~~~c~~lp~a~~~s~f~~d~~~~~vdVigIDEaQFf~dl~efc~evAd~~Gk~Viva 137 (234)
T KOG3125|consen 72 SSIVTHDGIEMPCWALPDASFLSEFGKDALNGDVDVIGIDEAQFFGDLYEFCREVADVHGKTVIVA 137 (234)
T ss_pred heeEeccCCcccccccCCchhHHHHHHHHhcCcceEEEecHHHHhHHHHHHHHHHHhccCCEEEEE
Confidence 7899999984322 3454568888886 78899999999998 69888873
No 232
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=27.84 E-value=64 Score=29.91 Aligned_cols=31 Identities=13% Similarity=-0.008 Sum_probs=23.1
Q ss_pred ceEEEEcCC--CccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSS--GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p--~~GH~~p~l~La~~L~~rGh~V 41 (343)
+||+++... ..|=-.-+..||+.|+++||+|
T Consensus 1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V 33 (392)
T cd03805 1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEV 33 (392)
T ss_pred CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeE
Confidence 467777543 2344456699999999999999
No 233
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=27.57 E-value=38 Score=30.34 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=21.4
Q ss_pred cCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 288 EAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
...--.+.+.+++++++++++|++..++..
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g 243 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMG 243 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCC
Confidence 344556777888888889999999887754
No 234
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=27.55 E-value=81 Score=27.38 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=24.8
Q ss_pred CCCEE-EECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAP-VTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~v-i~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+| |.|+.--..+..-|.++|||.|.+.-+.
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn 188 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTN 188 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCC
Confidence 58875 4577445557889999999999887664
No 235
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=27.17 E-value=90 Score=26.82 Aligned_cols=33 Identities=12% Similarity=0.031 Sum_probs=30.9
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.+.++++.+.++-.|-....=++..|..+|++|
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~V 119 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEV 119 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEE
Confidence 467999999999999999999999999999998
No 236
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=27.08 E-value=77 Score=27.87 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=24.5
Q ss_pred CCE-EEECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 61 LSA-PVTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 61 ~D~-vi~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
||+ +|.|+..-.-+..-|+++|||+|.++-+.
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn 189 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTN 189 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCC
Confidence 886 56688444457778999999999887664
No 237
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=26.61 E-value=61 Score=29.14 Aligned_cols=22 Identities=18% Similarity=0.075 Sum_probs=20.4
Q ss_pred CccChHHHHHHHHHHHHCCCCC
Q 043530 20 GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 20 ~~GH~~p~l~La~~L~~rGh~V 41 (343)
..|+..-...|++.|.+.||+|
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v 34 (375)
T cd03821 13 YGGPVRVVLNLSKALAKLGHEV 34 (375)
T ss_pred cCCeehHHHHHHHHHHhcCCcE
Confidence 4599999999999999999999
No 238
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=26.26 E-value=85 Score=27.72 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=26.0
Q ss_pred CCCE-EEECCCCccchHHHHHHcCCCcEEEecccH
Q 043530 60 PLSA-PVTDMTLTASVLPISRAINVPNYIFFTSSA 93 (343)
Q Consensus 60 ~~D~-vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~ 93 (343)
.||+ ||+|+..-.-+..-|.++|||.|.++-+.+
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTds 152 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDTDS 152 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCCC
Confidence 5776 556885555577899999999999987653
No 239
>PHA02754 hypothetical protein; Provisional
Probab=26.23 E-value=90 Score=20.57 Aligned_cols=24 Identities=8% Similarity=0.098 Sum_probs=18.1
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHH
Q 043530 300 ISEMMGNELLRIQEMRIREEARTA 323 (343)
Q Consensus 300 i~~vl~~~~~r~~a~~l~~~~~~a 323 (343)
|.+++.++.|++..+++++++-++
T Consensus 7 i~k~i~eK~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 7 IPKAIMEKDFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhC
Confidence 444455789999999999987554
No 240
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=25.83 E-value=82 Score=26.93 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=25.9
Q ss_pred CCCEE-EECCCCccchHHHHHHcCCCcEEEecccH
Q 043530 60 PLSAP-VTDMTLTASVLPISRAINVPNYIFFTSSA 93 (343)
Q Consensus 60 ~~D~v-i~D~~~~~~~~~~A~~lgiP~v~~~~~~~ 93 (343)
.||+| |.|+.--.-+..-|.++|||.|.++-+.+
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn~ 148 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTDN 148 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCCC
Confidence 68874 55875555677899999999999886643
No 241
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=25.50 E-value=98 Score=32.17 Aligned_cols=47 Identities=11% Similarity=0.331 Sum_probs=33.8
Q ss_pred ccCCccCCHHHHHHHHH-------hhcccccChhHHHHH--HH--------hCceEEeccCCcc
Q 043530 217 FGSRTAMSREQLRELGD-------GGFLTYCGWNSVTKA--MW--------NGVQVLAWPQHGD 263 (343)
Q Consensus 217 ~GS~~~~~~~~~~~l~~-------~~fvtHgG~~s~~ea--l~--------~GVP~l~~P~~~D 263 (343)
+||.-..+.+.+.+++. +++|.=||.+|..-| |+ .|+|++++|-.-|
T Consensus 456 LGT~R~~~~~~~~~i~~~l~~~~Id~LivIGGdgs~~~a~~L~~~~~~y~~~~i~vVgIPkTID 519 (762)
T cd00764 456 LGTKRTLPKKDLETIAYNFQKYGIDGLIIVGGFEAYKGLLQLREAREQYEEFCIPMVLIPATVS 519 (762)
T ss_pred ccccCCCcHHHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHHHhhCCCCCccEEEeccccc
Confidence 46654455566666555 899999999987655 22 6899999996655
No 242
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=25.37 E-value=88 Score=21.65 Aligned_cols=30 Identities=17% Similarity=0.418 Sum_probs=25.6
Q ss_pred cCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 288 EAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
.+.++++++.+.++.+.+|.-.+..++.+.
T Consensus 39 ~~kIsR~~fvr~lR~IVGD~lL~s~I~~lq 68 (70)
T PF12174_consen 39 KKKISREEFVRKLRQIVGDQLLRSAIKSLQ 68 (70)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999888888777765
No 243
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.92 E-value=1.7e+02 Score=23.77 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=44.0
Q ss_pred eccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHH
Q 043530 257 AWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLRIQEMRIREEARTA 323 (343)
Q Consensus 257 ~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r~~a~~l~~~~~~a 323 (343)
..|....+-.+|+.+.+.--++ ..-.+|.+.+.+.+++. +|+-+-.+.+++..+.++
T Consensus 77 pyPWt~~~L~aa~el~ee~eeL----------s~deke~~~~sl~dL~~d~PkT~vA~~rfKk~~~K~ 134 (158)
T PF10083_consen 77 PYPWTENALEAANELIEEDEEL----------SPDEKEQFKESLPDLTKDTPKTKVAATRFKKILSKA 134 (158)
T ss_pred CCchHHHHHHHHHHHHHHhhcC----------CHHHHHHHHhhhHHHhhcCCccHHHHHHHHHHHHHH
Confidence 4677778888888877743332 34478999999999996 588888888998888777
No 244
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=24.67 E-value=1.5e+02 Score=21.53 Aligned_cols=53 Identities=13% Similarity=0.211 Sum_probs=36.1
Q ss_pred CcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 287 GEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 287 ~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+.+.++.++++..+.+-|.+. +... ..+.+++++. ...|+...+.+||+..+.
T Consensus 22 ~~g~i~~~ELk~ll~~elg~~-ls~~-~~v~~mi~~~-D~d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 22 GKESLTASEFQELLTQQLPHL-LKDV-EGLEEKMKNL-DVNQDSKLSFEEFWELIG 74 (89)
T ss_pred CCCeECHHHHHHHHHHHhhhh-ccCH-HHHHHHHHHh-CCCCCCCCcHHHHHHHHH
Confidence 567899999999998855321 2211 5677777665 555666788888887653
No 245
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=24.55 E-value=76 Score=30.72 Aligned_cols=92 Identities=20% Similarity=0.192 Sum_probs=45.6
Q ss_pred CcEEEeccCCCCCCCCC--CcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH---hhcccccCh-hHHHHHHHhCceE
Q 043530 182 PLVIPIGLLPLYGFEKS--QPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD---GGFLTYCGW-NSVTKAMWNGVQV 255 (343)
Q Consensus 182 p~v~~VGpl~~~~~~~~--~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~---~~fvtHgG~-~s~~eal~~GVP~ 255 (343)
+.+.+||-+.....-+. +...-+... .+-++=.|+....-.+++++++. .-+...+|. ......++++.=+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~---~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLEL---GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHc---CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 45778888765422110 111112211 24444456543112344555554 112233443 4445568888889
Q ss_pred EeccCCcchhHHHHHHHHhcce
Q 043530 256 LAWPQHGDQKINADVVERTGMG 277 (343)
Q Consensus 256 l~~P~~~DQ~~na~~v~~~G~G 277 (343)
+++|-..|-+... .++....|
T Consensus 369 ~l~pS~~E~~gl~-~lEAma~G 389 (473)
T TIGR02095 369 ILMPSRFEPCGLT-QLYAMRYG 389 (473)
T ss_pred EEeCCCcCCcHHH-HHHHHHCC
Confidence 9999877755443 34444444
No 246
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=23.88 E-value=1.1e+02 Score=30.76 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.3
Q ss_pred EECCCCccchHHHHHHcCCCcEEEecccHHHHH
Q 043530 65 VTDMTLTASVLPISRAINVPNYIFFTSSAKMLT 97 (343)
Q Consensus 65 i~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 97 (343)
..+. +...++...++..+++.++.|+.+....
T Consensus 149 fHEW-maG~gll~lr~~~~~VaTvFTTHAT~lG 180 (633)
T PF05693_consen 149 FHEW-MAGVGLLYLRKRKPDVATVFTTHATLLG 180 (633)
T ss_dssp EESG-GGTTHHHHHHHTT-SCEEEEEESS-HHH
T ss_pred echH-hHhHHHHHHhccCCCeeEEEEecccchh
Confidence 3455 6667888999999999998888876654
No 247
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=23.53 E-value=73 Score=28.30 Aligned_cols=70 Identities=16% Similarity=0.059 Sum_probs=45.4
Q ss_pred ccChHHHHHHHHHHHHCCCCC---Cc---c---h----H---h---------------hhcccCCC-cCCCCCCEEEECC
Q 043530 21 MGHLTPFLRLAALLTAHHVKS---PE---N---H----V---T---------------SSLSLLPS-LSSPPLSAPVTDM 68 (343)
Q Consensus 21 ~GH~~p~l~La~~L~~rGh~V---~~---~---~----i---~---------------~~~~~l~~-l~~~~~D~vi~D~ 68 (343)
.|+..-+..|++.|.+.||+| +. . . . . .....+.. +++.++|+|++..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~ 93 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHD 93 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHHhhhcCCcEEEEec
Confidence 688999999999999999999 11 0 0 0 0 00011111 4456899999887
Q ss_pred CCccchH--HHHHHcCCCcEEEecc
Q 043530 69 TLTASVL--PISRAINVPNYIFFTS 91 (343)
Q Consensus 69 ~~~~~~~--~~A~~lgiP~v~~~~~ 91 (343)
...... ..+...++|.+.....
T Consensus 94 -~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 94 -WLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred -hhHHHHHHHHHHhcCCcEEEEecc
Confidence 443333 4778899998765543
No 248
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.11 E-value=2.6e+02 Score=20.37 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=22.4
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhc
Q 043530 295 QIAENISEMMGNELLRIQEMRIREEARTAIEQ 326 (343)
Q Consensus 295 ~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~ 326 (343)
++...++++++|.+.=+|.++.++...++..+
T Consensus 17 q~~~lL~~Ii~DttVPRNIRraA~~a~e~L~~ 48 (93)
T COG1698 17 QVMQLLDEIIQDTTVPRNIRRAAEEAKEALNN 48 (93)
T ss_pred HHHHHHHHHHccccccHHHHHHHHHHHHHHhC
Confidence 34445566667888778888888877777755
No 249
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=23.02 E-value=72 Score=24.74 Aligned_cols=29 Identities=10% Similarity=-0.057 Sum_probs=22.8
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
||++...++.+=.. ...+.++|.++|++|
T Consensus 2 ~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v 30 (129)
T PF02441_consen 2 RILLGVTGSIAAYK-APDLLRRLKRAGWEV 30 (129)
T ss_dssp EEEEEE-SSGGGGG-HHHHHHHHHTTTSEE
T ss_pred EEEEEEECHHHHHH-HHHHHHHHhhCCCEE
Confidence 67777776655555 999999999999998
No 250
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=22.85 E-value=5.9e+02 Score=26.67 Aligned_cols=67 Identities=12% Similarity=0.245 Sum_probs=43.6
Q ss_pred cccChhHHHHHHHhCceEEeccCC-cc---hhHHHHHHHHh-----cceeeeeccCC--CCcCcccHHHHHHHHHHHh
Q 043530 238 TYCGWNSVTKAMWNGVQVLAWPQH-GD---QKINADVVERT-----GMGIWVQSWGW--GGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 238 tHgG~~s~~eal~~GVP~l~~P~~-~D---Q~~na~~v~~~-----G~G~~l~~~~~--~~~~~~t~~~l~~ai~~vl 304 (343)
-||||-.++-|++.|.-++.+|-. .+ +...+..+.+. +.++.+-..+. .....++.+.|++.|.+-+
T Consensus 198 R~~G~LAl~aglA~gAd~ilIPE~p~~~~~~~~i~~~l~~~~~~gk~~~iIVVaEGa~d~~g~~i~~~~l~~~l~~~~ 275 (762)
T cd00764 198 RHCGYLALVSGLATGADWIFIPERPPEDGWEDQMCRRLSEHRSRGKRLNIIIVAEGAIDDQLKPITSEDVKDLVVERL 275 (762)
T ss_pred CCchHHHHHHHhccCCCEEEecCCCCchhHHHHHHHHHHHHHhcCCCcEEEEEeCCCccccCCCccHHHHHHHHHHhc
Confidence 499999999999999999999943 34 33334455443 45555532211 1124467788888887764
No 251
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=22.83 E-value=95 Score=29.75 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=45.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCCC----c---ch----Hh--hhc-------------ccCCC-cCCCCCC
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKSP----E---NH----VT--SSL-------------SLLPS-LSSPPLS 62 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~----~---~~----i~--~~~-------------~~l~~-l~~~~~D 62 (343)
..+++++.-+ .-.+.|++.|.+.|-+|. . .. ++ ... ..+.+ +++.+||
T Consensus 299 gk~v~i~~~~-----~~~~~l~~~L~e~G~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~el~~~i~~~~pd 373 (428)
T cd01965 299 GKRVAIAGDP-----DLLLGLSRFLLEMGAEPVAAVTGTDNPPFEKRMELLASLEGIPAEVVFVGDLWDLESLAKEEPVD 373 (428)
T ss_pred CCEEEEEcCh-----HHHHHHHHHHHHcCCcceEEEEcCCCchhHHHHHHhhhhcCCCceEEECCCHHHHHHHhhccCCC
Confidence 4467766432 355789999999999981 1 11 10 000 01111 4556899
Q ss_pred EEEECCCCccchHHHHHHcCCCcEEEe
Q 043530 63 APVTDMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 63 ~vi~D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
+||.+. ....+|+++|+|++.+.
T Consensus 374 liig~~----~~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 374 LLIGNS----HGRYLARDLGIPLVRVG 396 (428)
T ss_pred EEEECc----hhHHHHHhcCCCEEEec
Confidence 999998 56788999999997654
No 252
>cd08806 CARD_CARD14_CARMA2 Caspase activation and recruitment domain of CARD14-like proteins. Caspase activation and recruitment domain (CARD) similar to that found in CARD14, also known as BIMP2 or CARMA2 (caspase recruitment domain-containing membrane-associated guanylate kinase protein 2). CARD14 has been identified as a novel member of the MAGUK (membrane-associated guanylate kinase) family that functions as upstream activators of BCL10 (B-cell lymphoma 10) and NF-kB signaling. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways
Probab=22.78 E-value=2.2e+02 Score=20.54 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=26.1
Q ss_pred HHHHhCCHHHHHHHHH---HHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 300 ISEMMGNELLRIQEMR---IREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 300 i~~vl~~~~~r~~a~~---l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
.++|++++.+..++.+ |=++.+.. | .+++..|++.++
T Consensus 36 eeeIls~~t~~~r~~k~g~LLDIL~tr----G--~~g~~aFLeSLe 75 (86)
T cd08806 36 EEEVLHSPRLTNRAMRVGHLLDLLKTR----G--KNGAIAFLESLK 75 (86)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHhc----C--chHHHHHHHHHH
Confidence 4577888888888888 66666543 4 367777777664
No 253
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=22.71 E-value=78 Score=30.40 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=47.3
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc--c-h--------Hhhh-----c-ccCC-C---cCCCCCCEEEE
Q 043530 12 LFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE--N-H--------VTSS-----L-SLLP-S---LSSPPLSAPVT 66 (343)
Q Consensus 12 ~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~--~-~--------i~~~-----~-~~l~-~---l~~~~~D~vi~ 66 (343)
|+.++..|.. .+.+++.|.+-|-+| |. + . +... . ..+. + +++.+||++|.
T Consensus 287 kv~v~g~~~~-----~~~l~~~l~elGmevv~~~t~~~~~~~~~~~~~~~~~~~~~v~~~~dl~~~~~~l~~~~pDllig 361 (422)
T TIGR02015 287 RVTVSGYEGS-----ELLVVRLLLESGADVPYVGTAIPRTAWGAEDKRWLEMLGVEVKYRASLEDDMEAVLEFEPDLAIG 361 (422)
T ss_pred eEEEEcCCcc-----HHHHHHHHHHCCCEEEEEecCCCCccccHHHHHHHHhcCCCceeccCHHHHHHHHhhCCCCEEEc
Confidence 7888877766 888999999999998 22 1 0 1100 0 1121 1 55679999998
Q ss_pred CCCCccchHHHHHHcCCCcEEEe
Q 043530 67 DMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 67 D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
.. -...+|+++|||.+.+.
T Consensus 362 ~s----~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 362 TT----PLVQFAKEHGIPALYFT 380 (422)
T ss_pred CC----cchHHHHHcCCCEEEec
Confidence 87 45668999999988654
No 254
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=22.18 E-value=2.7e+02 Score=23.08 Aligned_cols=60 Identities=20% Similarity=0.189 Sum_probs=35.8
Q ss_pred HHHHHHHhCceEEeccCCc----ch---hHHHHHHHHhcceeeeeccC-----C-CCcCcccHHHHHHHHHHH
Q 043530 244 SVTKAMWNGVQVLAWPQHG----DQ---KINADVVERTGMGIWVQSWG-----W-GGEAIMKGEQIAENISEM 303 (343)
Q Consensus 244 s~~eal~~GVP~l~~P~~~----DQ---~~na~~v~~~G~G~~l~~~~-----~-~~~~~~t~~~l~~ai~~v 303 (343)
++..|+..++|++..|-+. +. ..|...+.+.|+-+.-...+ . +...-...++|.+.+.+-
T Consensus 104 ~~a~a~~~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~g~la~g~~g~g~~~~~~~i~~~~~~~ 176 (177)
T TIGR02113 104 SVALALPPETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKESLLACGDYGRGALADLDDILQTIKEI 176 (177)
T ss_pred HHHHHcCCCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCcCcccCCCccccCCCCHHHHHHHHHHh
Confidence 3445544589999999443 22 34566666667655433321 1 334456788888877653
No 255
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=22.14 E-value=50 Score=26.12 Aligned_cols=22 Identities=23% Similarity=0.057 Sum_probs=18.2
Q ss_pred CccChHHHHHHHHHHHHCCCCC
Q 043530 20 GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 20 ~~GH~~p~l~La~~L~~rGh~V 41 (343)
..|=-.-+..|+++|+++||+|
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v 32 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEV 32 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EE
T ss_pred CChHHHHHHHHHHHHHHCCCEE
Confidence 4466678899999999999999
No 256
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.09 E-value=1e+02 Score=26.76 Aligned_cols=34 Identities=3% Similarity=-0.033 Sum_probs=0.0
Q ss_pred cCCCCCCEEEECCCCccc--hHHHHHH-cCCCcEEEec
Q 043530 56 LSSPPLSAPVTDMTLTAS--VLPISRA-INVPNYIFFT 90 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~--~~~~A~~-lgiP~v~~~~ 90 (343)
|..++||+||... .... .....+. +|+|++.+..
T Consensus 70 i~~l~PDLIi~~~-~~~~~~~~~~l~~~~gipvv~~~~ 106 (262)
T cd01147 70 IAALKPDVVIDVG-SDDPTSIADDLQKKTGIPVVVLDG 106 (262)
T ss_pred HHhcCCCEEEEec-CCccchhHHHHHHhhCCCEEEEec
No 257
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=21.77 E-value=1.4e+02 Score=27.41 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=29.8
Q ss_pred CHHHHHHHHH-------hhcccccChhHHHHHHH---hCceEEeccCCcc
Q 043530 224 SREQLRELGD-------GGFLTYCGWNSVTKAMW---NGVQVLAWPQHGD 263 (343)
Q Consensus 224 ~~~~~~~l~~-------~~fvtHgG~~s~~eal~---~GVP~l~~P~~~D 263 (343)
.++..+++++ +.+|.=||-+|..-|.. +|+|++++|-.-|
T Consensus 77 ~~~~~~~~~~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTID 126 (317)
T cd00763 77 DEEGQAKAIEQLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTID 126 (317)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEeccccc
Confidence 4455555444 89999999888876644 5999999997665
No 258
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=21.29 E-value=1.9e+02 Score=26.22 Aligned_cols=78 Identities=9% Similarity=0.213 Sum_probs=45.7
Q ss_pred chhhhcCCCCceeEEeccCCc---------cCCHHHHHHHHHhh----cccccChhHHHHHHHhCceEEeccCCcchhHH
Q 043530 201 LAWLDDQATGSVVDVSFGSRT---------AMSREQLRELGDGG----FLTYCGWNSVTKAMWNGVQVLAWPQHGDQKIN 267 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~---------~~~~~~~~~l~~~~----fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~n 267 (343)
.+|.+..+- ..+=||+||.- .++-+.++++...+ +|-|||.|.--| .
T Consensus 161 ~~Fv~~Tgv-D~LAvaiGt~HG~y~~~~~p~Ld~~~L~~I~~~~~~iPLVlHGgSG~~~e-------------------~ 220 (287)
T PF01116_consen 161 KEFVEETGV-DALAVAIGTAHGMYKGGKKPKLDFDRLKEIREAVPDIPLVLHGGSGLPDE-------------------Q 220 (287)
T ss_dssp HHHHHHHTT-SEEEE-SSSBSSSBSSSSSTC--HHHHHHHHHHHHTSEEEESSCTTS-HH-------------------H
T ss_pred HHHHHHhCC-CEEEEecCccccccCCCCCcccCHHHHHHHHHhcCCCCEEEECCCCCCHH-------------------H
Confidence 678765543 36788999862 23455566665433 667777766655 4
Q ss_pred HHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 268 ADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 268 a~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
-++..+.|+... +..+--.....+++++.+.
T Consensus 221 ~~~ai~~Gi~Ki-------Ni~T~~~~a~~~~~~~~~~ 251 (287)
T PF01116_consen 221 IRKAIKNGISKI-------NIGTELRRAFTDALREYLA 251 (287)
T ss_dssp HHHHHHTTEEEE-------EESHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCceEE-------EEehHHHHHHHHHHHHHHH
Confidence 455566677643 2455566666777777775
No 259
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=21.14 E-value=1.1e+02 Score=23.89 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=21.1
Q ss_pred CCCCCCCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 1 MADSSELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 1 ~~~~~~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|..+.....+++|.|+-.+--|= .|++.|.++||+|
T Consensus 1 ~~~~~~~~~~l~I~iIGaGrVG~-----~La~aL~~ag~~v 36 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGAGRVGT-----ALARALARAGHEV 36 (127)
T ss_dssp -----------EEEEECTSCCCC-----HHHHHHHHTTSEE
T ss_pred CCccccCCCccEEEEECCCHHHH-----HHHHHHHHCCCeE
Confidence 45555666789999997765553 5899999999998
No 260
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=21.09 E-value=6.3e+02 Score=24.84 Aligned_cols=83 Identities=8% Similarity=-0.019 Sum_probs=49.8
Q ss_pred cChhHH-HHHHHhCc----eEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH--HHHHH
Q 043530 240 CGWNSV-TKAMWNGV----QVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE--LLRIQ 312 (343)
Q Consensus 240 gG~~s~-~eal~~GV----P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~--~~r~~ 312 (343)
-|+|-+ .|.++++. |+|.-=+ + -|. ++..-++.++ ....++++++|.+.|+.+ +-++|
T Consensus 392 DGmNLVa~Eyva~~~~~~GvLILSef-a----Gaa--~~l~~AllVN--------P~d~~~~A~ai~~AL~m~~~Er~~R 456 (487)
T TIGR02398 392 DGLNLVAKEYVAAQGLLDGVLVLSEF-A----GAA--VELKGALLTN--------PYDPVRMDETIYVALAMPKAEQQAR 456 (487)
T ss_pred cccCcchhhHHhhhcCCCCCEEEecc-c----cch--hhcCCCEEEC--------CCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 488855 49999877 4443322 2 111 3333356663 458899999999999753 34455
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 313 EMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 313 a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
.+++.+.++. -+...=.+.|++.+.
T Consensus 457 ~~~l~~~v~~-----~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 457 MREMFDAVNY-----YDVQRWADEFLAAVS 481 (487)
T ss_pred HHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 5555554432 345555667776653
No 261
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=20.90 E-value=5.9e+02 Score=24.16 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=44.4
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLRIQ 312 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r~~ 312 (343)
+.|+.-|+..|+|.+++- . |+-+....++.|.--.. .+....+.+.+.+.+.+.+. .++.+++
T Consensus 294 ~HsaI~al~~g~p~i~i~--Y-~~K~~~l~~~~gl~~~~-----~~i~~~~~~~l~~~~~e~~~~~~~~~~~ 357 (385)
T COG2327 294 LHSAIMALAFGVPAIAIA--Y-DPKVRGLMQDLGLPGFA-----IDIDPLDAEILSAVVLERLTKLDELRER 357 (385)
T ss_pred hHHHHHHHhcCCCeEEEe--e-cHHHHHHHHHcCCCccc-----ccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence 568889999999998874 2 34444556666654222 14678899999999988886 4666555
No 262
>PF07319 DnaI_N: Primosomal protein DnaI N-terminus; InterPro: IPR009928 This entry represents the N terminus (approximately 120 residues) of bacterial primosomal DnaI proteins, although one family member appears to be of viral origin. DnaI is one of the components of the Bacillus subtilis replication restart primosome, and is required for the DnaB75-dependent loading of the DnaC helicase [].; PDB: 2K7R_A.
Probab=20.88 E-value=72 Score=23.40 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=9.3
Q ss_pred HHHHHHHHHHhCCHHHHH
Q 043530 294 EQIAENISEMMGNELLRI 311 (343)
Q Consensus 294 ~~l~~ai~~vl~~~~~r~ 311 (343)
+...+.+++||.||..++
T Consensus 19 ~~~~~l~~~vl~dp~V~~ 36 (94)
T PF07319_consen 19 ERYEQLKQEVLSDPEVQA 36 (94)
T ss_dssp HHHHHHHHHHTT-HHHHH
T ss_pred HHHHHHHHHHHcCHHHHH
Confidence 344555666666665443
No 263
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=20.87 E-value=77 Score=30.23 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=45.7
Q ss_pred ccChHHHHHHHHHHHHCCCCC--Cc----chH----hhhcccCCC-cCCCCCCEEEECCCCccc---------hHHHHHH
Q 043530 21 MGHLTPFLRLAALLTAHHVKS--PE----NHV----TSSLSLLPS-LSSPPLSAPVTDMTLTAS---------VLPISRA 80 (343)
Q Consensus 21 ~GH~~p~l~La~~L~~rGh~V--~~----~~i----~~~~~~l~~-l~~~~~D~vi~D~~~~~~---------~~~~A~~ 80 (343)
.|-+-|.+.|-+.|. -+-+| |- |++ .++...+.+ +++.+||++|+-+.|.+. +..+.++
T Consensus 27 ~g~vGp~~~l~~~l~-~~~eVvaTiiCGDnYf~en~eea~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~ 105 (431)
T TIGR01918 27 EGQPPISQMLNKLLE-EDAEVVHTVVCGDSFFGENLEEAVARVLEMLKDKEPDIFIAGPAFNAGRYGVACGEICKVVQDK 105 (431)
T ss_pred cCCCChHHHHHHHhc-cCCEEEEEEEECchhhhhCHHHHHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHh
Confidence 355778999999998 44455 21 444 444455555 888999999999865432 1224567
Q ss_pred cCCCcEEEe
Q 043530 81 INVPNYIFF 89 (343)
Q Consensus 81 lgiP~v~~~ 89 (343)
+|||.++-.
T Consensus 106 ~~IP~vt~M 114 (431)
T TIGR01918 106 LNVPAVTSM 114 (431)
T ss_pred hCCCeEEEe
Confidence 999988644
No 264
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=20.83 E-value=82 Score=29.52 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=22.7
Q ss_pred CCCCCCEEEECCCCccchHHHHHHc-CCCcEEEec
Q 043530 57 SSPPLSAPVTDMTLTASVLPISRAI-NVPNYIFFT 90 (343)
Q Consensus 57 ~~~~~D~vi~D~~~~~~~~~~A~~l-giP~v~~~~ 90 (343)
++.+||+|++-. .+..+..+.+.+ ++|.+.+..
T Consensus 84 ~~~~pdvi~~h~-~~~~~~~l~~~~~~~~~v~~~~ 117 (396)
T cd03818 84 KGFRPDVIVAHP-GWGETLFLKDVWPDAPLIGYFE 117 (396)
T ss_pred cCCCCCEEEECC-ccchhhhHHHhCCCCCEEEEEe
Confidence 446899999887 554566666664 588887653
No 265
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=20.69 E-value=2.4e+02 Score=23.59 Aligned_cols=71 Identities=6% Similarity=-0.027 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHCCCCC---Cc---chHhhhcccCCC-cCCCCCC--EEEECCCCccchHHHHHHcCCCcEEEecccHHH
Q 043530 25 TPFLRLAALLTAHHVKS---PE---NHVTSSLSLLPS-LSSPPLS--APVTDMTLTASVLPISRAINVPNYIFFTSSAKM 95 (343)
Q Consensus 25 ~p~l~La~~L~~rGh~V---~~---~~i~~~~~~l~~-l~~~~~D--~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~ 95 (343)
.=...|.+.+.++|.++ ++ ..-..+...+.. +++...+ ++|-...=.+++..+|+++|+|.|.+.|+....
T Consensus 15 ~Ka~~l~~~~~~~~~~~~~~~p~l~~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~p~ 94 (187)
T PF05728_consen 15 FKAQALKQYFAEHGPDIQYPCPDLPPFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAVRPY 94 (187)
T ss_pred HHHHHHHHHHHHhCCCceEECCCCCcCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCCHH
Confidence 34566777888887665 11 112334444444 5555443 444444233446779999999999998875433
No 266
>COG1422 Predicted membrane protein [Function unknown]
Probab=20.60 E-value=4.3e+02 Score=22.50 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=26.6
Q ss_pred HHHHHHHhCC----HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 043530 297 AENISEMMGN----ELLRIQEMRIREEARTAIEQGGSLKKRLTEL 337 (343)
Q Consensus 297 ~~ai~~vl~~----~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~ 337 (343)
..-+++.+.| +++++.+++.++++++|-++|. ..+++++
T Consensus 61 ~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~~d--~~~lkkL 103 (201)
T COG1422 61 ITILQKLLIDQEKMKELQKMMKEFQKEFREAQESGD--MKKLKKL 103 (201)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCC--HHHHHHH
Confidence 3344555544 5699999999999999966655 3455544
No 267
>PF00318 Ribosomal_S2: Ribosomal protein S2; InterPro: IPR001865 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal S2 proteins have been shown to belong to a family that includes 40S ribosomal subunit 40kDa proteins, putative laminin-binding proteins, NAB-1 protein and 29.3kDa protein from Haloarcula marismortui [, ]. The laminin-receptor proteins are thus predicted to be the eukaryotic homologue of the eubacterial S2 risosomal proteins [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2QNH_c 3MR8_B 3PYS_B 3MS0_B 3PYN_B 1VOZ_B 2OW8_c 3PYQ_B 3D5C_B 3PYU_B ....
Probab=20.58 E-value=1.3e+02 Score=25.81 Aligned_cols=33 Identities=9% Similarity=0.176 Sum_probs=23.7
Q ss_pred CCCEEEE-CCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPVT-DMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi~-D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+||. |+-....+..-|..+|||.|.+.-+.
T Consensus 143 ~P~~vii~~~~~~~~~i~Ea~~l~IP~i~i~Dtn 176 (211)
T PF00318_consen 143 LPDLVIILDPNKNKNAIREANKLNIPTIAIVDTN 176 (211)
T ss_dssp SBSEEEESSTTTTHHHHHHHHHTTS-EEEEESTT
T ss_pred cCcEEEEecccccchhHHHHHhcCceEEEeecCC
Confidence 3887555 76444567888999999999987664
No 268
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=20.58 E-value=1.5e+02 Score=27.10 Aligned_cols=64 Identities=11% Similarity=0.015 Sum_probs=36.9
Q ss_pred HHHHHHHHHCCCCCC---cchHhhhcccCCCcCCCCCCEEEECCCC-----ccchHHHHHHcCCCcEEEeccc
Q 043530 28 LRLAALLTAHHVKSP---ENHVTSSLSLLPSLSSPPLSAPVTDMTL-----TASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 28 l~La~~L~~rGh~V~---~~~i~~~~~~l~~l~~~~~D~vi~D~~~-----~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
..+|++|.++|++|+ .+.+...++.... -=++.|.|..|... ++....+|+.+++|+++.+++.
T Consensus 161 ~~~a~~L~~~GI~vtlI~Dsav~~~m~~vd~-VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~~~ 232 (310)
T PRK08535 161 HITAKELAEYGIPVTLIVDSAVRYFMKDVDK-VVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAETY 232 (310)
T ss_pred HHHHHHHHHCCCCEEEEehhHHHHHHHhCCE-EEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEecccc
Confidence 457888888888873 2222111211111 00366666666421 2345668899999999887653
No 269
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=20.57 E-value=90 Score=29.93 Aligned_cols=71 Identities=6% Similarity=0.041 Sum_probs=44.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHH-HCCCCC----Cc-----chHhhhc----------c---cCCC-cCCCCCCEEEE
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLT-AHHVKS----PE-----NHVTSSL----------S---LLPS-LSSPPLSAPVT 66 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~-~rGh~V----~~-----~~i~~~~----------~---~l~~-l~~~~~D~vi~ 66 (343)
.+++++.- -.-.+.+++.|. +-|-+| +. +.++... . .+++ +++.+||++|.
T Consensus 302 krv~i~g~-----~~~~~~l~~~L~~elG~~vv~~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~e~~~~i~~~~pdliig 376 (430)
T cd01981 302 KRAFVFGD-----ATHVAAATRILAREMGFRVVGAGTYCKEDAKWFREQATGYCDEALITDDHTEVGDMIARTEPELIFG 376 (430)
T ss_pred CeEEEEcC-----hHHHHHHHHHHHHHcCCEEEeccCCCccHHHHHHHHHHhcCCceEEecCHHHHHHHHHhhCCCEEEe
Confidence 35555443 236688888887 789887 11 1111100 0 1112 45568999999
Q ss_pred CCCCccchHHHHHHcCCCcEEEec
Q 043530 67 DMTLTASVLPISRAINVPNYIFFT 90 (343)
Q Consensus 67 D~~~~~~~~~~A~~lgiP~v~~~~ 90 (343)
+. ....+|+++|+|++.+..
T Consensus 377 ~~----~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 377 TQ----MERHIGKRLDIPCAVISA 396 (430)
T ss_pred cc----hhhHHHHHcCCCEEEEeC
Confidence 98 455578999999987754
No 270
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=20.51 E-value=92 Score=30.81 Aligned_cols=30 Identities=3% Similarity=0.061 Sum_probs=24.6
Q ss_pred cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEe
Q 043530 56 LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
+++.+||+||.+. ....+|+++|||++.++
T Consensus 358 i~~~~PdliiG~~----~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 358 IAEAAPELVLGTQ----MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHhcCCCEEEEcc----hHHHHHHHcCCCEEEec
Confidence 5566999999887 56778999999997664
No 271
>PRK14099 glycogen synthase; Provisional
Probab=20.42 E-value=1.1e+02 Score=29.82 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=39.4
Q ss_pred hhccc---ccC-hhHHHHHHHhCceEEeccCCc--chhHHHHHHHH---hcceeeeeccCCCCcCcccHHHHHHHHHH--
Q 043530 234 GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHG--DQKINADVVER---TGMGIWVQSWGWGGEAIMKGEQIAENISE-- 302 (343)
Q Consensus 234 ~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~--DQ~~na~~v~~---~G~G~~l~~~~~~~~~~~t~~~l~~ai~~-- 302 (343)
++|+. +=| ..+.+||+++|+|.|+-...+ |--.......+ .+.|..+ ..-+.++++++|.+
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~--------~~~d~~~La~ai~~a~ 442 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF--------SPVTADALAAALRKTA 442 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe--------CCCCHHHHHHHHHHHH
Confidence 56653 222 347789999997666554322 21111100000 1457666 23478999999987
Q ss_pred -HhCCHHHHHH
Q 043530 303 -MMGNELLRIQ 312 (343)
Q Consensus 303 -vl~~~~~r~~ 312 (343)
++.|++.+++
T Consensus 443 ~l~~d~~~~~~ 453 (485)
T PRK14099 443 ALFADPVAWRR 453 (485)
T ss_pred HHhcCHHHHHH
Confidence 5667654433
No 272
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=20.39 E-value=90 Score=30.84 Aligned_cols=30 Identities=13% Similarity=0.115 Sum_probs=24.5
Q ss_pred cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEe
Q 043530 56 LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
+++.+||+||.+. +...+|+++|||++.++
T Consensus 370 I~~~~pdliiGs~----~er~ia~~lgiP~~~is 399 (513)
T CHL00076 370 IARVEPSAIFGTQ----MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHhcCCCEEEECc----hhhHHHHHhCCCEEEee
Confidence 4566899999988 56667999999997665
No 273
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=20.30 E-value=2.6e+02 Score=28.10 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=21.9
Q ss_pred hhcccccC------hhHHHHHHHhCceEEecc
Q 043530 234 GGFLTYCG------WNSVTKAMWNGVQVLAWP 259 (343)
Q Consensus 234 ~~fvtHgG------~~s~~eal~~GVP~l~~P 259 (343)
+++++|.| .+++.+|.+.++|+|++.
T Consensus 65 gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 65 GVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 77888876 557889999999999984
No 274
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.22 E-value=1.2e+02 Score=21.52 Aligned_cols=31 Identities=16% Similarity=-0.066 Sum_probs=22.9
Q ss_pred ceEEEEcCCCc--cChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGM--GHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~--GH~~p~l~La~~L~~rGh~V 41 (343)
.+++++|.... .+..-...++..|.+.|..|
T Consensus 2 ~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v 34 (94)
T cd00861 2 FDVVIIPMNMKDEVQQELAEKLYAELQAAGVDV 34 (94)
T ss_pred eEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 46888887643 45667788888898888664
No 275
>PRK11380 hypothetical protein; Provisional
Probab=20.11 E-value=3e+02 Score=25.53 Aligned_cols=78 Identities=8% Similarity=0.046 Sum_probs=49.4
Q ss_pred EEeccCCccCCHHHHHHHHHhhc--ccccChhHHHHH------------HHhCceEEeccCCcchhHHHHHHHHhcceee
Q 043530 214 DVSFGSRTAMSREQLRELGDGGF--LTYCGWNSVTKA------------MWNGVQVLAWPQHGDQKINADVVERTGMGIW 279 (343)
Q Consensus 214 yvs~GS~~~~~~~~~~~l~~~~f--vtHgG~~s~~ea------------l~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~ 279 (343)
|+..+-...++.+|.+.+..+++ .-||||..++|. =+++.|++..++ -+... .+
T Consensus 104 yy~~~~~~~LteEq~r~L~L~aVya~~~g~~~etLet~p~~~~~g~~~~~~~~lp~~~~~i-~~er~---------~~-- 171 (353)
T PRK11380 104 YYQAKGIEPLSEEKRQALQLIAVYRFYHGQWSETLEFWPRKPRPGKDTFQYHVLPFDSIDI-ISKRR---------ES-- 171 (353)
T ss_pred HHHHcCCCCCCHHHHHHHHHhhHHHHHhhhhhhhhhccccccccccccccccccccccccc-hhhhH---------HH--
Confidence 44555567789999998887544 456999999887 455666666554 22211 11
Q ss_pred eeccCCCCcCcccHHHHHHHHHHHhCCH
Q 043530 280 VQSWGWGGEAIMKGEQIAENISEMMGNE 307 (343)
Q Consensus 280 l~~~~~~~~~~~t~~~l~~ai~~vl~~~ 307 (343)
|.. ..+-.++|++.+.|..+..+.
T Consensus 172 L~~----~WGI~drEsai~tL~~L~~~G 195 (353)
T PRK11380 172 LED----DWGIEDSEGYCALMEHLLSGD 195 (353)
T ss_pred HHh----ccCCCCHHHHHHHHHHHHhCC
Confidence 111 234567888888888877643
No 276
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=20.09 E-value=90 Score=30.81 Aligned_cols=31 Identities=3% Similarity=0.039 Sum_probs=25.3
Q ss_pred cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEec
Q 043530 56 LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFT 90 (343)
Q Consensus 56 l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~ 90 (343)
+++.+||+||.+. ....+|+++|||++.+..
T Consensus 360 i~~~~pdliiG~~----~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 360 IAALEPELVLGTQ----MERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHhcCCCEEEECh----HHHHHHHHcCCCEEEecC
Confidence 5566999999988 677789999999976643
Done!