Query 043530
Match_columns 343
No_of_seqs 154 out of 1406
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:54:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043530.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043530hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.8E-61 9.6E-66 459.2 26.8 325 6-343 9-454 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.6E-53 5.5E-58 411.0 27.8 329 7-342 3-468 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 1.3E-53 4.6E-58 409.1 26.8 322 8-342 5-451 (456)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.5E-53 5.1E-58 412.0 26.1 326 1-342 1-478 (482)
5 2acv_A Triterpene UDP-glucosyl 100.0 6E-53 2.1E-57 405.5 21.7 327 9-343 8-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.1E-37 1.1E-41 293.2 22.1 309 6-340 8-419 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.6E-38 5.6E-43 299.3 12.4 265 8-323 20-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.5E-33 1.2E-37 264.7 19.7 273 11-321 1-383 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 8.1E-32 2.8E-36 254.9 24.5 297 6-341 16-412 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.9E-32 6.6E-37 259.7 16.8 284 11-337 1-395 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 6.6E-31 2.3E-35 247.1 24.1 292 11-341 5-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1.5E-31 5.3E-36 252.6 15.0 277 11-341 1-381 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 6.4E-30 2.2E-34 243.1 21.3 291 10-339 7-396 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 6.5E-30 2.2E-34 244.1 19.3 287 8-340 18-433 (441)
15 2p6p_A Glycosyl transferase; X 100.0 5E-29 1.7E-33 233.4 21.1 272 11-340 1-377 (384)
16 4fzr_A SSFS6; structural genom 100.0 3.2E-28 1.1E-32 229.1 14.5 270 6-336 11-394 (398)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.9 7E-27 2.4E-31 219.3 16.7 269 10-339 1-385 (391)
18 3oti_A CALG3; calicheamicin, T 99.9 1.6E-27 5.5E-32 224.4 10.6 272 6-339 16-394 (398)
19 3otg_A CALG1; calicheamicin, T 99.9 1.9E-24 6.5E-29 203.8 22.1 276 6-340 16-406 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 3.1E-21 1.1E-25 160.0 12.2 116 201-322 12-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 1.3E-20 4.5E-25 175.3 17.4 76 234-315 254-333 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.5 5.7E-13 1.9E-17 122.9 18.2 95 234-340 256-353 (364)
23 2jzc_A UDP-N-acetylglucosamine 98.9 4.8E-10 1.6E-14 96.0 3.0 59 234-303 134-196 (224)
24 3okp_A GDP-mannose-dependent a 98.1 0.00026 8.8E-09 65.0 18.7 61 239-312 290-350 (394)
25 3hbm_A UDP-sugar hydrolase; PS 97.9 6.4E-06 2.2E-10 73.0 4.7 47 234-281 227-273 (282)
26 1v4v_A UDP-N-acetylglucosamine 97.2 0.00034 1.2E-08 64.0 6.1 88 234-339 276-363 (376)
27 3ot5_A UDP-N-acetylglucosamine 97.0 0.00055 1.9E-08 63.8 4.8 90 234-341 303-392 (403)
28 2f9f_A First mannosyl transfer 96.9 0.002 6.8E-08 52.4 6.6 83 223-318 86-175 (177)
29 1vgv_A UDP-N-acetylglucosamine 96.8 0.00059 2E-08 62.6 3.6 74 226-313 274-349 (384)
30 4gyw_A UDP-N-acetylglucosamine 96.6 0.012 4E-07 59.0 11.3 64 239-313 609-675 (723)
31 3dzc_A UDP-N-acetylglucosamine 96.5 0.0011 3.6E-08 61.7 2.6 68 234-315 309-376 (396)
32 2iw1_A Lipopolysaccharide core 96.5 0.014 4.8E-07 52.8 10.2 74 234-318 272-349 (374)
33 3beo_A UDP-N-acetylglucosamine 96.3 0.0036 1.2E-07 57.0 5.1 89 234-340 284-372 (375)
34 3c48_A Predicted glycosyltrans 96.3 0.036 1.2E-06 51.4 11.8 78 223-312 314-397 (438)
35 2x6q_A Trehalose-synthase TRET 96.1 0.039 1.3E-06 50.9 11.3 86 211-312 294-385 (416)
36 2gek_A Phosphatidylinositol ma 96.1 0.054 1.9E-06 49.5 12.1 77 224-312 272-355 (406)
37 2xci_A KDO-transferase, 3-deox 96.1 0.01 3.4E-07 54.6 6.8 69 241-319 291-362 (374)
38 2jjm_A Glycosyl transferase, g 95.8 0.019 6.4E-07 52.6 7.3 67 234-312 286-356 (394)
39 3q3e_A HMW1C-like glycosyltran 95.6 0.069 2.4E-06 52.0 10.7 69 238-315 527-597 (631)
40 2vsy_A XCC0866; transferase, g 95.4 0.074 2.5E-06 51.3 10.4 103 224-338 443-553 (568)
41 3oy2_A Glycosyltransferase B73 95.3 0.1 3.6E-06 47.8 10.7 100 223-339 262-385 (413)
42 4hwg_A UDP-N-acetylglucosamine 95.3 0.0078 2.7E-07 55.6 2.8 62 234-309 284-345 (385)
43 2bfw_A GLGA glycogen synthase; 95.2 0.068 2.3E-06 43.6 8.2 59 242-313 129-188 (200)
44 2r60_A Glycosyl transferase, g 95.0 0.11 3.9E-06 49.1 10.1 58 242-311 372-429 (499)
45 3rhz_A GTF3, nucleotide sugar 95.0 0.047 1.6E-06 49.4 7.0 101 222-340 221-336 (339)
46 3fro_A GLGA glycogen synthase; 94.0 0.19 6.3E-06 46.2 8.9 101 224-341 320-427 (439)
47 3qhp_A Type 1 capsular polysac 93.3 0.14 4.8E-06 40.3 5.9 78 225-315 65-149 (166)
48 2iuy_A Avigt4, glycosyltransfe 93.3 0.28 9.5E-06 43.7 8.4 51 242-305 255-307 (342)
49 2qzs_A Glycogen synthase; glyc 93.0 0.49 1.7E-05 44.4 10.0 68 234-313 368-451 (485)
50 1rzu_A Glycogen synthase 1; gl 92.5 0.53 1.8E-05 44.1 9.5 68 234-313 367-450 (485)
51 3s28_A Sucrose synthase 1; gly 89.2 1.3 4.4E-05 44.8 9.1 67 234-312 666-740 (816)
52 2x0d_A WSAF; GT4 family, trans 85.5 0.29 1E-05 45.3 1.8 77 223-312 303-385 (413)
53 3tl4_X Glutaminyl-tRNA synthet 76.1 1.9 6.6E-05 35.0 3.3 64 266-341 103-177 (187)
54 2hy7_A Glucuronosyltransferase 75.7 1.5 5.2E-05 40.2 3.0 68 223-308 273-354 (406)
55 3vue_A GBSS-I, granule-bound s 74.6 9.3 0.00032 36.5 8.3 59 243-305 416-476 (536)
56 2lpm_A Two-component response 73.6 3.3 0.00011 31.1 3.9 76 5-89 3-86 (123)
57 1uqt_A Alpha, alpha-trehalose- 71.4 30 0.001 32.5 10.8 108 211-342 332-452 (482)
58 3fro_A GLGA glycogen synthase; 69.6 3.2 0.00011 37.7 3.6 33 9-41 1-38 (439)
59 3c48_A Predicted glycosyltrans 69.6 2.8 9.6E-05 38.3 3.2 35 7-41 17-62 (438)
60 3nb0_A Glycogen [starch] synth 63.8 24 0.00083 34.8 8.5 21 241-261 531-551 (725)
61 2lnd_A De novo designed protei 61.5 23 0.00078 24.1 5.6 48 250-304 49-99 (112)
62 2iuy_A Avigt4, glycosyltransfe 61.4 4.8 0.00017 35.3 3.1 77 10-89 3-110 (342)
63 2r60_A Glycosyl transferase, g 60.4 4.6 0.00016 37.8 2.8 33 9-41 6-53 (499)
64 2x6q_A Trehalose-synthase TRET 58.2 7.3 0.00025 35.3 3.7 33 9-41 39-73 (416)
65 3vue_A GBSS-I, granule-bound s 56.2 7.6 0.00026 37.1 3.6 35 7-41 6-46 (536)
66 2i2c_A Probable inorganic poly 54.7 9.6 0.00033 32.8 3.7 50 234-305 37-92 (272)
67 2iw1_A Lipopolysaccharide core 54.5 7.2 0.00025 34.5 3.0 31 11-41 1-34 (374)
68 1qkk_A DCTD, C4-dicarboxylate 53.8 49 0.0017 24.6 7.5 63 251-321 74-136 (155)
69 1ccw_A Protein (glutamate muta 50.3 15 0.00051 27.9 3.8 32 10-41 3-34 (137)
70 2yxb_A Coenzyme B12-dependent 50.3 13 0.00046 29.1 3.6 33 9-41 17-49 (161)
71 2gek_A Phosphatidylinositol ma 48.5 10 0.00035 33.9 3.0 84 8-91 18-139 (406)
72 2x0d_A WSAF; GT4 family, trans 47.9 6.8 0.00023 35.9 1.7 34 8-41 44-82 (413)
73 2an1_A Putative kinase; struct 47.4 15 0.00051 31.8 3.8 26 234-259 65-94 (292)
74 2r8r_A Sensor protein; KDPD, P 46.3 20 0.00067 30.0 4.1 35 7-41 3-37 (228)
75 1y80_A Predicted cobalamin bin 46.0 19 0.00064 29.5 4.0 33 9-41 87-119 (210)
76 4hwg_A UDP-N-acetylglucosamine 43.2 10 0.00035 34.4 2.1 76 10-88 9-123 (385)
77 3c01_A Surface presentation of 42.9 53 0.0018 20.0 4.6 32 291-322 1-32 (48)
78 2rdm_A Response regulator rece 42.6 88 0.003 22.1 8.1 78 8-92 3-89 (132)
79 3t5t_A Putative glycosyltransf 41.9 1.2E+02 0.0041 28.5 9.2 101 223-342 360-471 (496)
80 1yt5_A Inorganic polyphosphate 41.7 15 0.00052 31.2 2.9 51 234-306 43-96 (258)
81 2jk1_A HUPR, hydrogenase trans 41.7 95 0.0032 22.4 7.3 60 251-317 71-130 (139)
82 3pm6_A Putative fructose-bisph 41.3 83 0.0028 27.5 7.4 77 201-305 178-267 (306)
83 2i2x_B MTAC, methyltransferase 41.1 24 0.00083 30.0 4.1 34 8-41 121-154 (258)
84 2cob_A LCOR protein; MLR2, KIA 37.9 36 0.0012 22.6 3.5 31 286-316 9-40 (70)
85 1vi6_A 30S ribosomal protein S 36.4 34 0.0012 28.1 4.0 33 60-92 115-148 (208)
86 3ezx_A MMCP 1, monomethylamine 36.3 31 0.0011 28.4 3.9 34 8-41 90-123 (215)
87 3bzy_A ESCU; auto cleavage pro 36.2 78 0.0027 19.8 4.7 34 289-322 5-38 (54)
88 1rzu_A Glycogen synthase 1; gl 35.2 20 0.00067 33.1 2.8 31 11-41 1-37 (485)
89 3li6_A Calcium-binding protein 34.7 78 0.0027 19.3 5.1 51 287-342 13-63 (66)
90 2qzs_A Glycogen synthase; glyc 34.2 22 0.00077 32.7 3.0 31 11-41 1-37 (485)
91 3bch_A 40S ribosomal protein S 34.2 37 0.0013 28.8 4.0 33 60-92 151-184 (253)
92 3bbn_B Ribosomal protein S2; s 33.8 27 0.00092 29.3 3.0 33 60-92 157-190 (231)
93 2vqe_B 30S ribosomal protein S 32.6 31 0.0011 29.4 3.2 33 60-92 158-191 (256)
94 2wqk_A 5'-nucleotidase SURE; S 32.1 38 0.0013 28.8 3.7 35 56-91 81-128 (251)
95 3dzc_A UDP-N-acetylglucosamine 31.9 10 0.00035 34.5 0.2 77 10-88 25-141 (396)
96 3elf_A Fructose-bisphosphate a 31.5 1.8E+02 0.0063 25.8 8.2 79 201-305 188-292 (349)
97 2rjn_A Response regulator rece 31.4 25 0.00084 26.4 2.3 63 251-321 78-141 (154)
98 2yvq_A Carbamoyl-phosphate syn 31.1 26 0.00088 26.8 2.3 72 14-87 27-130 (143)
99 2iz6_A Molybdenum cofactor car 30.6 1.3E+02 0.0044 23.8 6.5 59 234-304 110-172 (176)
100 1psw_A ADP-heptose LPS heptosy 30.0 50 0.0017 28.8 4.4 75 11-86 1-105 (348)
101 1eiw_A Hypothetical protein MT 29.2 77 0.0026 23.0 4.5 60 234-304 40-108 (111)
102 2l2q_A PTS system, cellobiose- 28.7 52 0.0018 23.6 3.6 78 8-91 2-85 (109)
103 4b4k_A N5-carboxyaminoimidazol 28.5 2.2E+02 0.0076 22.6 9.8 97 224-326 62-176 (181)
104 3ot5_A UDP-N-acetylglucosamine 28.3 12 0.00042 34.0 0.1 80 8-88 25-144 (403)
105 2gkg_A Response regulator homo 27.4 91 0.0031 21.7 4.9 46 251-305 79-124 (127)
106 3oow_A Phosphoribosylaminoimid 27.3 2.2E+02 0.0077 22.3 8.1 87 234-327 62-160 (166)
107 2xzm_B RPS0E; ribosome, transl 27.0 38 0.0013 28.5 2.8 33 60-92 114-147 (241)
108 3kcn_A Adenylate cyclase homol 26.3 1.9E+02 0.0065 21.0 6.8 53 250-310 74-127 (151)
109 2jjm_A Glycosyl transferase, g 25.6 40 0.0014 29.9 3.0 33 9-41 14-47 (394)
110 3ju3_A Probable 2-oxoacid ferr 25.6 1.2E+02 0.0042 21.9 5.2 17 288-304 100-116 (118)
111 2hy7_A Glucuronosyltransferase 25.6 30 0.001 31.3 2.2 35 5-41 9-46 (406)
112 1v4v_A UDP-N-acetylglucosamine 24.7 23 0.00078 31.3 1.1 77 11-88 6-121 (376)
113 1gvf_A Tagatose-bisphosphate a 24.6 1.6E+02 0.0056 25.3 6.5 77 201-304 161-247 (286)
114 3h5d_A DHDPS, dihydrodipicolin 23.3 3E+02 0.01 23.8 8.2 47 201-249 34-92 (311)
115 3afo_A NADH kinase POS5; alpha 23.0 48 0.0016 30.1 2.9 50 234-305 116-170 (388)
116 3tqr_A Phosphoribosylglycinami 22.9 71 0.0024 26.3 3.7 58 8-89 3-61 (215)
117 3zqu_A Probable aromatic acid 22.8 67 0.0023 26.3 3.5 31 10-41 4-34 (209)
118 3l7i_A Teichoic acid biosynthe 22.0 67 0.0023 31.7 4.0 101 234-342 617-719 (729)
119 1u0t_A Inorganic polyphosphate 21.9 38 0.0013 29.5 2.0 27 234-260 77-107 (307)
120 3kjh_A CO dehydrogenase/acetyl 21.5 46 0.0016 27.2 2.4 31 11-41 1-31 (254)
121 3hbm_A UDP-sugar hydrolase; PS 21.1 21 0.00071 30.9 0.1 25 11-35 1-29 (282)
122 4dpp_A DHDPS 2, dihydrodipicol 21.1 2.7E+02 0.0092 24.8 7.4 48 201-250 86-145 (360)
123 3j20_B 30S ribosomal protein S 21.0 63 0.0021 26.4 2.9 33 60-92 111-144 (202)
124 2xws_A Sirohydrochlorin cobalt 21.0 80 0.0027 23.2 3.4 53 210-262 4-70 (133)
125 3jte_A Response regulator rece 20.7 1.1E+02 0.0038 22.0 4.3 52 251-310 76-127 (143)
126 3pfn_A NAD kinase; structural 20.5 42 0.0014 30.2 1.9 25 234-258 110-138 (365)
127 4b4o_A Epimerase family protei 20.4 57 0.0019 27.7 2.8 27 11-41 1-27 (298)
128 3kuu_A Phosphoribosylaminoimid 20.4 3.2E+02 0.011 21.5 6.9 87 234-327 69-167 (174)
129 3to5_A CHEY homolog; alpha(5)b 20.3 2E+02 0.0069 21.2 5.6 47 251-305 86-132 (134)
130 3kxe_C Antitoxin protein PARD- 20.2 69 0.0024 22.2 2.6 48 292-342 30-77 (88)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.8e-61 Score=459.18 Aligned_cols=325 Identities=23% Similarity=0.329 Sum_probs=271.4
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCC--CCC----Cc-ch-------------H-------------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHH--VKS----PE-NH-------------V------------------- 46 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rG--h~V----~~-~~-------------i------------------- 46 (343)
++.+++||+++|+|++||++||++||+.|++|| +.| |+ ++ |
T Consensus 9 ~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~ 88 (454)
T 3hbf_A 9 NGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNP 88 (454)
T ss_dssp ---CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCT
T ss_pred cCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCCh
Confidence 345688999999999999999999999999999 765 22 10 1
Q ss_pred --------hhhcccCCC-cCC------CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc-C-
Q 043530 47 --------TSSLSLLPS-LSS------PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV-G- 109 (343)
Q Consensus 47 --------~~~~~~l~~-l~~------~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~- 109 (343)
..+.+.+++ +++ .++||||+|. ++.|+..+|+++|||++.|++++++.++.+.+.+.+... +
T Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~-~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 89 REPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDA-FFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEET-TCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECC-cchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 001112222 222 3799999999 778999999999999999999999999888776654432 1
Q ss_pred ----CCCccc-CCCCCCCCCCCCCCCccc-ccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCc
Q 043530 110 ----SKDAIE-MPTLEPIPKPWILPPLFQ-DMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPL 183 (343)
Q Consensus 110 ----~~~~~~-~p~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~ 183 (343)
....+. +|++|+++.++ +|.++. +..+...+++.+..+...+++++++||+++||+++++++++. .|+
T Consensus 168 ~~~~~~~~~~~iPg~p~~~~~d-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~-----~~~ 241 (454)
T 3hbf_A 168 KEVHDVKSIDVLPGFPELKASD-LPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK-----FKL 241 (454)
T ss_dssp HHHTTSSCBCCSTTSCCBCGGG-SCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTT-----SSC
T ss_pred CccccccccccCCCCCCcChhh-CchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhc-----CCC
Confidence 122344 89999999999 998776 444456677777777888999999999999999999998865 689
Q ss_pred EEEeccCCCCCCC-----CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-------------------------
Q 043530 184 VIPIGLLPLYGFE-----KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------- 233 (343)
Q Consensus 184 v~~VGpl~~~~~~-----~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------- 233 (343)
+++|||++..... +.++.+||+.+++++||||||||+...+.+++.+++.
T Consensus 242 v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~ 321 (454)
T 3hbf_A 242 LLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGF 321 (454)
T ss_dssp EEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTH
T ss_pred EEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhH
Confidence 9999999764321 2346899999988999999999999999999888875
Q ss_pred -------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCCCC
Q 043530 234 -------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGG 287 (343)
Q Consensus 234 -------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~ 287 (343)
++|||||||||++||+++|||+|++|+++||+.||+++++. |+|+.+ .
T Consensus 322 ~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l------~ 395 (454)
T 3hbf_A 322 LERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV------D 395 (454)
T ss_dssp HHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEEC------G
T ss_pred HhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEe------c
Confidence 59999999999999999999999999999999999999995 999999 5
Q ss_pred cCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 288 EAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
.+.+|+++|.++|+++|+|+ +||+||++|++++++++++||||++++++|++++..
T Consensus 396 ~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 396 NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 56899999999999999887 899999999999999999999999999999999863
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.6e-53 Score=411.01 Aligned_cols=329 Identities=28% Similarity=0.471 Sum_probs=251.7
Q ss_pred CCCCceEEEEcCCCccChHHHHHHHHHHHHC-CCCC----Cc-c-h---Hhh----------------------------
Q 043530 7 LKPSRLFALLSSSGMGHLTPFLRLAALLTAH-HVKS----PE-N-H---VTS---------------------------- 48 (343)
Q Consensus 7 ~~~~~~il~~~~p~~GH~~p~l~La~~L~~r-Gh~V----~~-~-~---i~~---------------------------- 48 (343)
..+++||+++|+|++||++|+++||++|++| ||+| ++ + . +..
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhH
Confidence 3456899999999999999999999999998 9999 22 1 0 100
Q ss_pred ------hc----ccCCC-cCC----CCC-CEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccC--C
Q 043530 49 ------SL----SLLPS-LSS----PPL-SAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVG--S 110 (343)
Q Consensus 49 ------~~----~~l~~-l~~----~~~-D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~--~ 110 (343)
.. +.+++ +++ .++ ||||+|. ++.|+..+|+++|||++.++++++.....+.+++.+.... .
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDL-FGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECT-TCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECC-cchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 00 01111 222 267 9999999 7779999999999999999999988777766655433211 1
Q ss_pred ----CCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEE
Q 043530 111 ----KDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIP 186 (343)
Q Consensus 111 ----~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~ 186 (343)
.....+|++++++..+ ++..+.+.....++.+.+.....++++++++|+++++|+.....+++. .+..|++++
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~--~~~~~~v~~ 238 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKD-FLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP--GLDKPPVYP 238 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGG-SCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSC--CTTCCCEEE
T ss_pred ccccCCcccCCCCCCCChHH-CchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhc--ccCCCcEEE
Confidence 1124578888777777 776554332234444455555667788999999999999888777642 112478999
Q ss_pred eccCCCCCCC------CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH---------------------------
Q 043530 187 IGLLPLYGFE------KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD--------------------------- 233 (343)
Q Consensus 187 VGpl~~~~~~------~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--------------------------- 233 (343)
|||++..... +.++.+||+.++++++|||||||+...+.+++++++.
T Consensus 239 vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~ 318 (480)
T 2vch_A 239 VGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDS 318 (480)
T ss_dssp CCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC
T ss_pred EeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccccccccc
Confidence 9999875422 1234889999888999999999997655544433221
Q ss_pred ----------------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHH-H
Q 043530 234 ----------------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVV-E 272 (343)
Q Consensus 234 ----------------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v-~ 272 (343)
++|||||||||++||+++|||||++|+++||+.||+++ +
T Consensus 319 ~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~ 398 (480)
T 2vch_A 319 HSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSE 398 (480)
T ss_dssp --CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH
T ss_pred ccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHH
Confidence 48999999999999999999999999999999999997 6
Q ss_pred HhcceeeeeccCCCCcCcccHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 273 RTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG---NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 273 ~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~---~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+.|+|+.++.. ..+.+|+++|+++|+++|+ +++||+||++|++++++++++||+|..++++|+++++
T Consensus 399 ~~G~g~~l~~~---~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 399 DIRAALRPRAG---DDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp TTCCEECCCCC---TTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HhCeEEEeecc---cCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 88999999321 1137999999999999998 7899999999999999999999999999999999886
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.3e-53 Score=409.07 Aligned_cols=322 Identities=20% Similarity=0.340 Sum_probs=252.6
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC------Cc-ch--------------H----------h---------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS------PE-NH--------------V----------T--------- 47 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V------~~-~~--------------i----------~--------- 47 (343)
.+++||+++|+|++||++|+++||++|++|||.| |+ +. + .
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChH
Confidence 3467999999999999999999999999999887 21 00 0 0
Q ss_pred --------hhcccCCC-cC------CCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccccc-C--
Q 043530 48 --------SSLSLLPS-LS------SPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLV-G-- 109 (343)
Q Consensus 48 --------~~~~~l~~-l~------~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~-- 109 (343)
.+.+.+++ ++ ..+|||||+|. ++.|+..+|+++|||++.++++++..+..+.+.+.+... +
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADA-FIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEET-TSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECC-chHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 00011112 22 24899999999 667999999999999999999998776655433321110 1
Q ss_pred -----CCCcc-cCCCCCCCCCCCCCCCcccc--cchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCC
Q 043530 110 -----SKDAI-EMPTLEPIPKPWILPPLFQD--MNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGL 181 (343)
Q Consensus 110 -----~~~~~-~~p~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 181 (343)
....+ .+|++++++.++ +|..+.. ..+...+.+.+..+..++++.+++||+++||++.++.+++. .
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~-----~ 237 (456)
T 2c1x_A 164 GIQGREDELLNFIPGMSKVRFRD-LQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK-----L 237 (456)
T ss_dssp CCTTCTTCBCTTSTTCTTCBGGG-SCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH-----S
T ss_pred ccccccccccccCCCCCcccHHh-CchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc-----C
Confidence 01122 378887777777 7754431 12233344444445567889999999999999988888765 5
Q ss_pred CcEEEeccCCCCCCC-----CCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------
Q 043530 182 PLVIPIGLLPLYGFE-----KSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------- 233 (343)
Q Consensus 182 p~v~~VGpl~~~~~~-----~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------- 233 (343)
|++++|||++..... +.++.+||+.++++++|||||||....+.+++.+++.
T Consensus 238 ~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~ 317 (456)
T 2c1x_A 238 KTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPE 317 (456)
T ss_dssp SCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCT
T ss_pred CCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCH
Confidence 799999999764321 1245799999888999999999998877777777654
Q ss_pred ---------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCC
Q 043530 234 ---------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGW 285 (343)
Q Consensus 234 ---------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~ 285 (343)
++|||||||||++||+++|||+|++|+++||+.||+++++. |+|+.+
T Consensus 318 ~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l----- 392 (456)
T 2c1x_A 318 GFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----- 392 (456)
T ss_dssp THHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC-----
T ss_pred HHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe-----
Confidence 69999999999999999999999999999999999999999 999999
Q ss_pred CCcCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 286 GGEAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 286 ~~~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
..+.+|+++|.++|+++|+|+ +||+||+++++++++++.+||||++++++|+++++
T Consensus 393 -~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 393 -EGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp -GGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred -cCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 456799999999999999987 89999999999999999999999999999999885
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.5e-53 Score=412.04 Aligned_cols=326 Identities=27% Similarity=0.481 Sum_probs=248.3
Q ss_pred CCCCCCCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCCC----c-c--hH-h-----------------------hh
Q 043530 1 MADSSELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKSP----E-N--HV-T-----------------------SS 49 (343)
Q Consensus 1 ~~~~~~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~----~-~--~i-~-----------------------~~ 49 (343)
|+... .+++||+++|+|++||++|+++||++|++|||+|| + + .+ . ..
T Consensus 1 ~~~~~--~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~ 78 (482)
T 2pq6_A 1 MGNFA--NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPM 78 (482)
T ss_dssp ---------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC--
T ss_pred CCccc--CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCc
Confidence 44433 34679999999999999999999999999999992 1 1 01 0 00
Q ss_pred c-----------------ccC----CC-cC-------CCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHH
Q 043530 50 L-----------------SLL----PS-LS-------SPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFV 100 (343)
Q Consensus 50 ~-----------------~~l----~~-l~-------~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 100 (343)
. ..+ ++ ++ ..++||||+|. ++.|+..+|+++|||++.++++++.....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 157 (482)
T 2pq6_A 79 EGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDC-CMSFTIQAAEEFELPNVLYFSSSACSLLNVM 157 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEET-TCTHHHHHHHHTTCCEEEEECSCHHHHHHHT
T ss_pred ccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECC-cchhHHHHHHHcCCCEEEEecccHHHHHHHH
Confidence 0 000 11 22 24799999999 7779999999999999999999987766554
Q ss_pred hhhcccccC------C-------CCc-c-cCCCCCCCCCCCCCCCccccc--chHHHHHHHHHHhhccCcCEEEEeCccc
Q 043530 101 SFHTHTLVG------S-------KDA-I-EMPTLEPIPKPWILPPLFQDM--NNFLKTSFIENAKKMTESDGILVNISKT 163 (343)
Q Consensus 101 ~~~~~~~~~------~-------~~~-~-~~p~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 163 (343)
+++.....+ . .+. + .+|++++++..+ +|.++... .+...+.+.+..+...+++.+++||+++
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~ 236 (482)
T 2pq6_A 158 HFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKD-IVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNE 236 (482)
T ss_dssp THHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGG-SCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGG
T ss_pred HHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHH-CchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHH
Confidence 333211100 0 011 1 256666665566 66554322 2334455555556677899999999999
Q ss_pred ccchhHHhhhcCCccCCCCcEEEeccCCCC--CC---------------CCCCcchhhhcCCCCceeEEeccCCccCCHH
Q 043530 164 IEGKTLAELNGGKVIEGLPLVIPIGLLPLY--GF---------------EKSQPLAWLDDQATGSVVDVSFGSRTAMSRE 226 (343)
Q Consensus 164 le~~~~~~~~~~~~~~~~p~v~~VGpl~~~--~~---------------~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~ 226 (343)
||++.++++++. .|++++|||++.. .. ++.++.+||+.++++++|||||||....+.+
T Consensus 237 le~~~~~~~~~~-----~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 237 LESDVINALSST-----IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp GGHHHHHHHHTT-----CTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred HhHHHHHHHHHh-----CCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 999999988865 5899999999753 11 1123488999988899999999998766666
Q ss_pred HHHHHHH------------------------------------------------------hhcccccChhHHHHHHHhC
Q 043530 227 QLRELGD------------------------------------------------------GGFLTYCGWNSVTKAMWNG 252 (343)
Q Consensus 227 ~~~~l~~------------------------------------------------------~~fvtHgG~~s~~eal~~G 252 (343)
++.+++. ++|||||||||++||+++|
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~G 391 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAG 391 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcC
Confidence 6555442 5699999999999999999
Q ss_pred ceEEeccCCcchhHHHHHHH-HhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHhcCC
Q 043530 253 VQVLAWPQHGDQKINADVVE-RTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNE---LLRIQEMRIREEARTAIEQGG 328 (343)
Q Consensus 253 VP~l~~P~~~DQ~~na~~v~-~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~---~~r~~a~~l~~~~~~a~~~gg 328 (343)
||+|++|+++||+.||++++ +.|+|+.+ . ..+|+++|.++|+++|+|+ +||+||+++++++++|+++||
T Consensus 392 vP~i~~P~~~dQ~~na~~~~~~~G~g~~l------~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 464 (482)
T 2pq6_A 392 VPMLCWPFFADQPTDCRFICNEWEIGMEI------D-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGG 464 (482)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEEEC------C-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred CCEEecCcccchHHHHHHHHHHhCEEEEE------C-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999997 68999999 4 5799999999999999988 699999999999999999999
Q ss_pred CHHHHHHHHHHHHh
Q 043530 329 SLKKRLTELVEMWK 342 (343)
Q Consensus 329 ~~~~~~~~~~~~~~ 342 (343)
||++++++|+++++
T Consensus 465 ss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 465 CSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHH
Confidence 99999999999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=6e-53 Score=405.46 Aligned_cols=327 Identities=24% Similarity=0.493 Sum_probs=253.5
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHC--CCCC----Cc-ch-------Hh--------------------hh-----
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAH--HVKS----PE-NH-------VT--------------------SS----- 49 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~r--Gh~V----~~-~~-------i~--------------------~~----- 49 (343)
+++||+++|+|++||++|+++||++|++| ||+| |+ ++ +. ..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 56899999999999999999999999999 9999 22 11 10 00
Q ss_pred ------------cccCCC-cCC---CCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCC---
Q 043530 50 ------------LSLLPS-LSS---PPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGS--- 110 (343)
Q Consensus 50 ------------~~~l~~-l~~---~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~--- 110 (343)
.+.+++ +++ .+|||||+|. ++.|+..+|+++|||++.++++++..+..+.+++.+...+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~-~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTILSNKVVGLVLDF-FCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDD 166 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEG-GGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCC
T ss_pred ccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECC-cchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCC
Confidence 001112 333 5799999999 77899999999999999999999988777766665431111
Q ss_pred -CC---cccCCCC-CCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEE
Q 043530 111 -KD---AIEMPTL-EPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVI 185 (343)
Q Consensus 111 -~~---~~~~p~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~ 185 (343)
.. ...+|++ ++++..+ ++..+.+. ...+..+.+.....++++++++||+++||++..+++++.. .| .|+++
T Consensus 167 ~~~~~~~~~~pg~~~~~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~-~p-~~~v~ 242 (463)
T 2acv_A 167 SDRDHQLLNIPGISNQVPSNV-LPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD-EK-IPPIY 242 (463)
T ss_dssp SSGGGCEECCTTCSSCEEGGG-SCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC-TT-SCCEE
T ss_pred ccccCceeECCCCCCCCChHH-CchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc-cc-CCcEE
Confidence 11 3347887 7776666 66444332 2244444455556678899999999999999888776520 12 46899
Q ss_pred EeccCCCCCC-C--C------CCcchhhhcCCCCceeEEeccCCc-cCCHHHHHHHHH----------------------
Q 043530 186 PIGLLPLYGF-E--K------SQPLAWLDDQATGSVVDVSFGSRT-AMSREQLRELGD---------------------- 233 (343)
Q Consensus 186 ~VGpl~~~~~-~--~------~~~~~wl~~~~~~~vVyvs~GS~~-~~~~~~~~~l~~---------------------- 233 (343)
+|||++.... . . .++.+||+.++++++|||||||+. .++.+++.+++.
T Consensus 243 ~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~ 322 (463)
T 2acv_A 243 AVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPE 322 (463)
T ss_dssp ECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCT
T ss_pred EeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCCh
Confidence 9999986542 1 1 134889999888999999999998 666554443322
Q ss_pred -----------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHH-HHhcceeee-ec
Q 043530 234 -----------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVV-ERTGMGIWV-QS 282 (343)
Q Consensus 234 -----------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v-~~~G~G~~l-~~ 282 (343)
++|||||||||++||+++|||+|++|+++||+.||+++ ++.|+|+.+ +.
T Consensus 323 ~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~ 402 (463)
T 2acv_A 323 GFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 402 (463)
T ss_dssp THHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred hHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecc
Confidence 67999999999999999999999999999999999995 788999998 21
Q ss_pred cCCCCcC--cccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 043530 283 WGWGGEA--IMKGEQIAENISEMMG-NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWKN 343 (343)
Q Consensus 283 ~~~~~~~--~~t~~~l~~ai~~vl~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~~ 343 (343)
+ +.+ .+|+++|.++|+++|+ +++||+||++|++++++++++||||++++++|++++++
T Consensus 403 ~---~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 403 Y---RKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 463 (463)
T ss_dssp C---CTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred c---CCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcC
Confidence 1 124 7899999999999997 58999999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-37 Score=293.20 Aligned_cols=309 Identities=16% Similarity=0.135 Sum_probs=205.9
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH--------------h-h---------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV--------------T-S--------------- 48 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i--------------~-~--------------- 48 (343)
.+++.+||+++++|++||++|+++||++|+++||+| ++ ..+ . .
T Consensus 8 ~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (424)
T 2iya_A 8 ASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAM 87 (424)
T ss_dssp ---CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHH
T ss_pred CCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccccccchhhcchhHHHHH
Confidence 334568999999999999999999999999999999 22 111 0 0
Q ss_pred ---------hcccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCC
Q 043530 49 ---------SLSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPT 118 (343)
Q Consensus 49 ---------~~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 118 (343)
..+.+.+ +++.+||+||+|. +..|+..+|+++|||++.+++.+.........++.. ..+ ..+...+.
T Consensus 88 ~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~-~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 164 (424)
T 2iya_A 88 GLFLDEAVRVLPQLEDAYADDRPDLIVYDI-ASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QDP-TADRGEEA 164 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSEEEEET-TCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SCC-CC------
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCEEEEcC-cccHHHHHHHhcCCCEEEEecccccccccccccccc-ccc-cccccccc
Confidence 0011112 4567999999999 667899999999999999998764211111000000 000 00000000
Q ss_pred CCCCCCCCCCCCccc--ccchHHHHHHHHHHh----------hccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEE
Q 043530 119 LEPIPKPWILPPLFQ--DMNNFLKTSFIENAK----------KMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIP 186 (343)
Q Consensus 119 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~ 186 (343)
.++..... ...... ...+...+.+.+... .....+.++++++++++++. +.. .+++++
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~-----~~~~~~ 234 (424)
T 2iya_A 165 AAPAGTGD-AEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTV-----GDNYTF 234 (424)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGC-----CTTEEE
T ss_pred cccccccc-chhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCC-----CCCEEE
Confidence 00000000 000000 000111111111111 11146789999999998763 111 467999
Q ss_pred eccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH---------------------------------
Q 043530 187 IGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD--------------------------------- 233 (343)
Q Consensus 187 VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--------------------------------- 233 (343)
|||+..... +..+|++..+++++|||+|||......+.+.+++.
T Consensus 235 vGp~~~~~~---~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~ 311 (424)
T 2iya_A 235 VGPTYGDRS---HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQ 311 (424)
T ss_dssp CCCCCCCCG---GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEES
T ss_pred eCCCCCCcc---cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEec
Confidence 999864321 12468876667889999999998655666655543
Q ss_pred -----------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHH
Q 043530 234 -----------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISE 302 (343)
Q Consensus 234 -----------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~ 302 (343)
++||||||+||++||+++|||+|++|.+.||+.||+++++.|+|+.+ ....+++++|.++|++
T Consensus 312 ~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ 385 (424)
T 2iya_A 312 WVPQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI------PRDQVTAEKLREAVLA 385 (424)
T ss_dssp SCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC------CGGGCCHHHHHHHHHH
T ss_pred CCCHHHHHhhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc------CcCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 4567899999999999
Q ss_pred HhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 303 MMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 303 vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+|+|++||++++++++.+++ .++..+.++.+.+.
T Consensus 386 ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 419 (424)
T 2iya_A 386 VASDPGVAERLAAVRQEIRE----AGGARAAADILEGI 419 (424)
T ss_dssp HHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHH
Confidence 99999999999999998864 35556666655443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.6e-38 Score=299.26 Aligned_cols=265 Identities=18% Similarity=0.180 Sum_probs=167.0
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Ccc--hH-----------------------------------
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PEN--HV----------------------------------- 46 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~~--~i----------------------------------- 46 (343)
.+.|||+|+++|++||++|+++||++|++|||+| +++ .+
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEG 99 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTTTCEEEESSTTCCSHHHHSCCC-----------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhcCCeeEecCCchhHhhhccccccccccccchhh
Confidence 3689999999999999999999999999999999 110 00
Q ss_pred ------h--------hhcccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCC
Q 043530 47 ------T--------SSLSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSK 111 (343)
Q Consensus 47 ------~--------~~~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (343)
. .....+.. +++++||+||+|. +..++..+|+++|||++.+...............
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~-~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~-------- 170 (400)
T 4amg_A 100 LGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTP-TQGAGPLTAAALQLPCVELPLGPADSEPGLGALI-------- 170 (400)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECT-TCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH--------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECc-chHHHHHHHHHcCCCceeecccccccccchhhHH--------
Confidence 0 00011112 4456899999999 7779999999999999877654321111100000
Q ss_pred CcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCC
Q 043530 112 DAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLP 191 (343)
Q Consensus 112 ~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~ 191 (343)
.+.+.....+.................. ........ ....+..+.+.+..
T Consensus 171 ------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~ 220 (400)
T 4amg_A 171 ------------------------RRAMSKDYERHGVTGEPTGSVRLTTTPP----SVEALLPE--DRRSPGAWPMRYVP 220 (400)
T ss_dssp ------------------------HHHTHHHHHHTTCCCCCSCEEEEECCCH----HHHHTSCG--GGCCTTCEECCCCC
T ss_pred ------------------------HHHHHHHHHHhCCCcccccchhhcccCc----hhhccCcc--cccCCcccCccccc
Confidence 0000000000000000111111111110 00000000 00123344444433
Q ss_pred CCCCCCCCcchhhhcCCCCceeEEeccCCccCC--HHHHHHHHH------------------------------------
Q 043530 192 LYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMS--REQLRELGD------------------------------------ 233 (343)
Q Consensus 192 ~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~--~~~~~~l~~------------------------------------ 233 (343)
.... .....|++..+++++|||||||..... .+++.+++.
T Consensus 221 ~~~~--~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~ 298 (400)
T 4amg_A 221 YNGG--AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPL 298 (400)
T ss_dssp CCCC--EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCH
T ss_pred cccc--ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCH
Confidence 2211 122569998888999999999986433 233444433
Q ss_pred -------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 -------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 -------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++|||||||||++||+++|||+|++|+++||+.||+++++.|+|+.+ +....++ ++|+++|+|
T Consensus 299 ~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l------~~~~~~~----~al~~lL~d 368 (400)
T 4amg_A 299 GALLETCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA------EAGSLGA----EQCRRLLDD 368 (400)
T ss_dssp HHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC------CTTTCSH----HHHHHHHHC
T ss_pred HHHhhhhhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc------CCCCchH----HHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999 4455655 467789999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 043530 307 ELLRIQEMRIREEARTA 323 (343)
Q Consensus 307 ~~~r~~a~~l~~~~~~a 323 (343)
++||+||+++++++++.
T Consensus 369 ~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 369 AGLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998754
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.5e-33 Score=264.71 Aligned_cols=273 Identities=16% Similarity=0.166 Sum_probs=184.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH--------------hhhc----------------c--
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV--------------TSSL----------------S-- 51 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i--------------~~~~----------------~-- 51 (343)
|||+|+++++.||++|+++||++|++|||+| ++ +.+ .... .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHHHHhhcccccchHHHHHHHHHHH
Confidence 5899999999999999999999999999999 22 111 0000 0
Q ss_pred --cCCCcC--CCCCCEEEECCCCccc--hHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCCCC-CCCC
Q 043530 52 --LLPSLS--SPPLSAPVTDMTLTAS--VLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLE-PIPK 124 (343)
Q Consensus 52 --~l~~l~--~~~~D~vi~D~~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~ 124 (343)
.++.+. ..+||+||+|.++..| +..+|+++|||++.++++++.... ..+|... +++.
T Consensus 81 ~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~----------------~~~p~~~~~~~~ 144 (415)
T 1iir_A 81 ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS----------------PYYPPPPLGEPS 144 (415)
T ss_dssp HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------------SSSCCCC-----
T ss_pred HHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC----------------cccCCccCCccc
Confidence 011111 4589999999745667 889999999999999877543110 0011100 0100
Q ss_pred CCC-CCCccccc-ch-HHHHHH----HHHHhh--c----------cCcCEEEEeCcccccc-hhHHhhhcCCccCCCCcE
Q 043530 125 PWI-LPPLFQDM-NN-FLKTSF----IENAKK--M----------TESDGILVNISKTIEG-KTLAELNGGKVIEGLPLV 184 (343)
Q Consensus 125 ~~~-l~~~~~~~-~~-~~~~~~----~~~~~~--~----------~~~~~~l~~s~~~le~-~~~~~~~~~~~~~~~p~v 184 (343)
..+ ..+.+... .+ .....+ ...... . ... .+++|+++++++ +. +.. ++
T Consensus 145 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~----------~~~-~~ 212 (415)
T 1iir_A 145 TQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQP----------TDL-DA 212 (415)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCC----------CSS-CC
T ss_pred cchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCCc----------ccC-Ce
Confidence 000 00000000 00 000101 111100 0 112 578999998887 31 113 89
Q ss_pred EEeccCCCCCCCC--CCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------------
Q 043530 185 IPIGLLPLYGFEK--SQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------------- 233 (343)
Q Consensus 185 ~~VGpl~~~~~~~--~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------------- 233 (343)
++|||++..+... .++.+|++.. +++|||||||.. ...+.++.++.
T Consensus 213 ~~vG~~~~~~~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~ 289 (415)
T 1iir_A 213 VQTGAWILPDERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFA 289 (415)
T ss_dssp EECCCCCCCCCCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEE
T ss_pred EeeCCCccCcccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEE
Confidence 9999998754322 2337899765 479999999986 44444444432
Q ss_pred -------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 -------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 -------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||||||+||++||+++|||+|++|.+.||+.||+++++.|+|+.+ ....+++++|.++|
T Consensus 290 ~~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i 363 (415)
T 1iir_A 290 IGEVNHQVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH------DGPIPTFDSLSAAL 363 (415)
T ss_dssp CSSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC------SSSSCCHHHHHHHH
T ss_pred eCcCChHHHHhhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC------CcCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 45678999999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHH
Q 043530 301 SEMMGNELLRIQEMRIREEAR 321 (343)
Q Consensus 301 ~~vl~~~~~r~~a~~l~~~~~ 321 (343)
+++ .|++|+++++++++.++
T Consensus 364 ~~l-~~~~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 364 ATA-LTPETHARATAVAGTIR 383 (415)
T ss_dssp HHH-TSHHHHHHHHHHHHHSC
T ss_pred HHH-cCHHHHHHHHHHHHHHh
Confidence 999 99999999999998874
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=8.1e-32 Score=254.91 Aligned_cols=297 Identities=14% Similarity=0.083 Sum_probs=200.3
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Ccc---hH----------h---------------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PEN---HV----------T--------------------- 47 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~~---~i----------~--------------------- 47 (343)
+....+||+|+++++.||++|++.|+++|+++||+| ++. .+ .
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRP 95 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHH
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHHHH
Confidence 444578999999999999999999999999999999 211 11 0
Q ss_pred ---------hhcccCCC-cCCCCCCEEEEC-CCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccC
Q 043530 48 ---------SSLSLLPS-LSSPPLSAPVTD-MTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEM 116 (343)
Q Consensus 48 ---------~~~~~l~~-l~~~~~D~vi~D-~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (343)
.....+.+ +++++||+||+| . +..++..+|+++|||++.+.+.......... .+.. .
T Consensus 96 ~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~-~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~----------~ 163 (415)
T 3rsc_A 96 HLMYLRENVSVLRATAEALDGDVPDLVLYDDF-PFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDM----------V 163 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCCSEEEEEST-THHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHH----------H
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCEEEECch-hhhHHHHHHHHhCCCEEEEEecccccCcccc-cccc----------c
Confidence 00112223 677899999999 6 7778899999999999988754321000000 0000 0
Q ss_pred CCCCCCCCCCCCCCcccccchHHHHHHHHH------Hhhcc-CcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEecc
Q 043530 117 PTLEPIPKPWILPPLFQDMNNFLKTSFIEN------AKKMT-ESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGL 189 (343)
Q Consensus 117 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGp 189 (343)
+... .. .|.........+.+...+. ..... ..+..++...+.++... .. ...++.++||
T Consensus 164 ---~~~~-~~-~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~----~~~~~~~vGp 229 (415)
T 3rsc_A 164 ---TLAG-TI-DPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAG-----DT----FDDRFVFVGP 229 (415)
T ss_dssp ---HHHT-CC-CGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTG-----GG----CCTTEEECCC
T ss_pred ---cccc-cC-ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCc-----cc----CCCceEEeCC
Confidence 0000 00 0100000001111111110 00011 12566666655555432 11 1346999999
Q ss_pred CCCCCCCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------------------
Q 043530 190 LPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------------------ 233 (343)
Q Consensus 190 l~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------------------ 233 (343)
+..... +...|....+++++|||++||......+.+.+++.
T Consensus 230 ~~~~~~---~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~ 306 (415)
T 3rsc_A 230 CFDDRR---FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVP 306 (415)
T ss_dssp CCCCCG---GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCC
T ss_pred CCCCcc---cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCC
Confidence 875422 22457665667889999999987655555555443
Q ss_pred --------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 --------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 --------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
++||||||+||++||+++|+|+|++|...||+.||+++++.|+|+.+ ..+.+++++|.++|+++|+
T Consensus 307 ~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 307 HVKVLEQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp HHHHHHHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC------CGGGCCHHHHHHHHHHHHT
T ss_pred HHHHHhhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc------ccCCCCHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999998 5567899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 306 NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 306 ~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
|++++++++++++.+.+ +++..+.++.+.+.+
T Consensus 381 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 381 DPALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 99999999999998754 466677777665544
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.9e-32 Score=259.66 Aligned_cols=284 Identities=15% Similarity=0.118 Sum_probs=192.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH--------------hhhcc---------cC-------
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV--------------TSSLS---------LL------- 53 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i--------------~~~~~---------~l------- 53 (343)
|||++++.++.||++|+++||++|+++||+| ++ +.+ ..... .+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCHHHHHhhccccchhHHHHHHHHHH
Confidence 5899999999999999999999999999999 22 111 00000 00
Q ss_pred -CC----cC--CCCCCEEEECCCCccc--hHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCC-CCCCCC
Q 043530 54 -PS----LS--SPPLSAPVTDMTLTAS--VLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMP-TLEPIP 123 (343)
Q Consensus 54 -~~----l~--~~~~D~vi~D~~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~ 123 (343)
.. +. ..+||+||+|.++.++ +..+|+++|||++.+++++..... ..+| ..+ ++
T Consensus 81 ~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~----------------~~~p~~~~-~~ 143 (416)
T 1rrv_A 81 VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS----------------PHLPPAYD-EP 143 (416)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------------SSSCCCBC-SC
T ss_pred HHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC----------------cccCCCCC-CC
Confidence 11 22 4589999999734556 788999999999998877532100 0011 111 11
Q ss_pred C-CCCCCCccccc-ch-HHHH----HHHHHH------------hhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcE
Q 043530 124 K-PWILPPLFQDM-NN-FLKT----SFIENA------------KKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLV 184 (343)
Q Consensus 124 ~-~~~l~~~~~~~-~~-~~~~----~~~~~~------------~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v 184 (343)
. ..|+.+.+... .+ .... ...+.. +...+. .+++|++++++++. +.. ++
T Consensus 144 ~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~----------~~~-~~ 211 (416)
T 1rrv_A 144 TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ----------PDV-DA 211 (416)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC----------SSC-CC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC----------CCC-Ce
Confidence 1 00000000000 00 0000 011111 011122 68999999888752 113 79
Q ss_pred EEeccCCCCCCCC--CCcchhhhcCCCCceeEEeccCCcc-CCHHHHHHHHH----------------------------
Q 043530 185 IPIGLLPLYGFEK--SQPLAWLDDQATGSVVDVSFGSRTA-MSREQLRELGD---------------------------- 233 (343)
Q Consensus 185 ~~VGpl~~~~~~~--~~~~~wl~~~~~~~vVyvs~GS~~~-~~~~~~~~l~~---------------------------- 233 (343)
++|||++...... .++.+|++.. +++|||+|||... ...+.+++++.
T Consensus 212 ~~vG~~~~~~~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~ 289 (416)
T 1rrv_A 212 VQTGAWLLSDERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCF 289 (416)
T ss_dssp EECCCCCCCCCCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEE
T ss_pred eeECCCccCccCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEE
Confidence 9999998764322 2337898765 4799999999863 23333433332
Q ss_pred --------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHH
Q 043530 234 --------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAEN 299 (343)
Q Consensus 234 --------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~a 299 (343)
++||||||+||++||+++|||+|++|.+.||+.||+++++.|+|+.+ .....++++|.++
T Consensus 290 ~~~~~~~~~ll~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~------~~~~~~~~~l~~~ 363 (416)
T 1rrv_A 290 AIDEVNFQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH------DGPTPTFESLSAA 363 (416)
T ss_dssp EESSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC------SSSCCCHHHHHHH
T ss_pred EeccCChHHHhccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC------CCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 4567899999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 043530 300 ISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTEL 337 (343)
Q Consensus 300 i~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~ 337 (343)
|+++ .|++|+++++++++++++ .++. +.++.+
T Consensus 364 i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i 395 (416)
T 1rrv_A 364 LTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLV 395 (416)
T ss_dssp HHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHH
T ss_pred HHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHH
Confidence 9999 999999999999988753 3444 555544
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.98 E-value=6.6e-31 Score=247.14 Aligned_cols=292 Identities=16% Similarity=0.130 Sum_probs=196.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc----chH----------h--------------------------
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS---PE----NHV----------T-------------------------- 47 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~----~~i----------~-------------------------- 47 (343)
+||+|+++++.||++|++.|+++|+++||+| +. ..+ .
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYV 84 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHHHH
Confidence 4999999999999999999999999999999 21 111 0
Q ss_pred ----hhcccCCC-cCCCCCCEEEEC-CCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCCCCC
Q 043530 48 ----SSLSLLPS-LSSPPLSAPVTD-MTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEP 121 (343)
Q Consensus 48 ----~~~~~l~~-l~~~~~D~vi~D-~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 121 (343)
...+.+.+ +++++||+||+| . +..++..+|+++|||++.+.+....... +.+ .+.+.+
T Consensus 85 ~~~~~~~~~l~~~l~~~~pD~Vi~d~~-~~~~~~~aA~~~giP~v~~~~~~~~~~~---~~~------------~~~~~~ 148 (402)
T 3ia7_A 85 RENVAILRAAEEALGDNPPDLVVYDVF-PFIAGRLLAARWDRPAVRLTGGFAANEH---YSL------------FKELWK 148 (402)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEST-THHHHHHHHHHHTCCEEEEESSCCCBTT---BCH------------HHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCEEEECch-HHHHHHHHHHhhCCCEEEEecccccCcc---ccc------------cccccc
Confidence 00112233 677899999999 6 7778999999999999988754321100 000 000000
Q ss_pred CCCCCCCCCcccccchHHHHHHHHH------HhhccC-cCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCCCC
Q 043530 122 IPKPWILPPLFQDMNNFLKTSFIEN------AKKMTE-SDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPLYG 194 (343)
Q Consensus 122 ~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~~~ 194 (343)
..... .|...........+...+. ...... .+..+.....+++... .. ...++.+|||+....
T Consensus 149 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~----~~~~~~~vGp~~~~~ 218 (402)
T 3ia7_A 149 SNGQR-HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFA-----ET----FDERFAFVGPTLTGR 218 (402)
T ss_dssp HHTCC-CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTG-----GG----CCTTEEECCCCCCC-
T ss_pred ccccc-ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcc-----cc----CCCCeEEeCCCCCCc
Confidence 00000 0100000000001111000 000111 2555665555555432 11 135699999987543
Q ss_pred CCCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------------------------
Q 043530 195 FEKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------------------------- 233 (343)
Q Consensus 195 ~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------------------------- 233 (343)
. +...|+...+++++||+++||......+.+.+++.
T Consensus 219 ~---~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll 295 (402)
T 3ia7_A 219 D---GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVL 295 (402)
T ss_dssp ------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHH
T ss_pred c---cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHH
Confidence 2 22457665667789999999998766555555543
Q ss_pred ---hhcccccChhHHHHHHHhCceEEeccC-CcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 ---GGFLTYCGWNSVTKAMWNGVQVLAWPQ-HGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ---~~fvtHgG~~s~~eal~~GVP~l~~P~-~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++||||||+||++||+++|+|+|++|. ..||..|++++++.|+|+.+ ..+.+++++|.++|+++|+|+++
T Consensus 296 ~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~------~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 296 AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL------RPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp TTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC------CGGGCSHHHHHHHHHHHHHCHHH
T ss_pred hhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc------cCCCCCHHHHHHHHHHHHcCHHH
Confidence 999999999999999999999999999 99999999999999999998 55678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 310 RIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 310 r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
+++++++++.+.+ ++++.+.++.+.+.+
T Consensus 370 ~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 370 RERVRRMQRDILS----SGGPARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----CChHHHHHHHHHHHH
Confidence 9999999988743 466677776665544
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.97 E-value=1.5e-31 Score=252.61 Aligned_cols=277 Identities=15% Similarity=0.091 Sum_probs=184.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC---C-cch---Hh-------------h--------hcccCCC-----cC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS---P-ENH---VT-------------S--------SLSLLPS-----LS 57 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~-~~~---i~-------------~--------~~~~l~~-----l~ 57 (343)
|||+|++.++.||++|++.|+++|++|||+| + +++ ++ . ....+.. ++
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999 2 211 10 0 0000000 11
Q ss_pred ----C-----CCCCEEEECCCCccch---HHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCCCCCCCCC
Q 043530 58 ----S-----PPLSAPVTDMTLTASV---LPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKP 125 (343)
Q Consensus 58 ----~-----~~~D~vi~D~~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 125 (343)
. .+||+||+|. ...++ ..+|+++|||++.+..++....+. ...
T Consensus 81 ~~~~~l~~~~~~pD~Vi~~~-~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------------------~~~----- 135 (404)
T 3h4t_A 81 EWFDKVPAAIEGCDAVVTTG-LLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------------------QSQ----- 135 (404)
T ss_dssp HHHHHHHHHHTTCSEEEEEE-CHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG-------------------SCH-----
T ss_pred HHHHHHHHHhcCCCEEEECC-chhhhhhhhhHHhhcCCCEEEEEcCCccCCCh-------------------hHH-----
Confidence 1 2799999996 43344 688999999999887664310000 000
Q ss_pred CCCCCcccccchHHHHH----HHHHHh--hc---------cCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccC
Q 043530 126 WILPPLFQDMNNFLKTS----FIENAK--KM---------TESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLL 190 (343)
Q Consensus 126 ~~l~~~~~~~~~~~~~~----~~~~~~--~~---------~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl 190 (343)
. .....+....+. +.+... .. ...+..+.+..+.+.+.. +..+++.++|++
T Consensus 136 ~----~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~----------~~~~~~~~~G~~ 201 (404)
T 3h4t_A 136 A----ERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR----------PTDLGTVQTGAW 201 (404)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC----------TTCCSCCBCCCC
T ss_pred H----HHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC----------CCCCCeEEeCcc
Confidence 0 000000000000 000000 00 012234556666565431 113578899988
Q ss_pred CCCCCCCC--CcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH-----------------------------------
Q 043530 191 PLYGFEKS--QPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD----------------------------------- 233 (343)
Q Consensus 191 ~~~~~~~~--~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~----------------------------------- 233 (343)
+....... +..+|++. .+++|||||||+.. ..+.+..+..
T Consensus 202 ~~~~~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~ 278 (404)
T 3h4t_A 202 ILPDQRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNH 278 (404)
T ss_dssp CCCCCCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCH
T ss_pred ccCCCCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCH
Confidence 76543222 22667774 35799999999975 4444444332
Q ss_pred -------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 -------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 -------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
++||||||+||++||+++|||+|++|+++||+.||+++++.|+|+.+ .....++++|.++|+++++
T Consensus 279 ~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l------~~~~~~~~~l~~ai~~ll~- 351 (404)
T 3h4t_A 279 QVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH------DGPTPTVESLSAALATALT- 351 (404)
T ss_dssp HHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC------SSSSCCHHHHHHHHHHHTS-
T ss_pred HHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc------CcCCCCHHHHHHHHHHHhC-
Confidence 99999999999999999999999999999999999999999999999 5677899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 307 ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 307 ~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++|+++++++++.+++ .+..+.++.+.+.+
T Consensus 352 ~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 352 PGIRARAAAVAGTIRT-----DGTTVAAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHHHHTTCCC-----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHH
Confidence 9999999999998743 44556665555443
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=6.4e-30 Score=243.07 Aligned_cols=291 Identities=17% Similarity=0.144 Sum_probs=193.8
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH----------hh------------------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV----------TS------------------------ 48 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i----------~~------------------------ 48 (343)
.+||++++.++.||++|++.|+++|+++||+| +. ..+ ..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFL 86 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHHHHHHHH
Confidence 46999999999999999999999999999999 11 111 00
Q ss_pred --h---cccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCcccCCCCCCC
Q 043530 49 --S---LSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDAIEMPTLEPI 122 (343)
Q Consensus 49 --~---~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 122 (343)
+ ...+.+ +++.+||+||+|. +.+++..+|+++|||++.+++...........+.. ++ ....
T Consensus 87 ~~~~~~~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--------~~----~~~~ 153 (430)
T 2iyf_A 87 NDAIQALPQLADAYADDIPDLVLHDI-TSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE--------PM----WREP 153 (430)
T ss_dssp HHHHHHHHHHHHHHTTSCCSEEEEET-TCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHH--------HH----HHHH
T ss_pred HHHHHHHHHHHHHhhccCCCEEEECC-ccHHHHHHHHHcCCCEEEEeccccccccccccccc--------ch----hhhh
Confidence 0 001112 4567999999998 66688999999999999988664311000000000 00 0000
Q ss_pred CCCCCCCCcccccchHHHHHHHHH------HhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCc-EEEeccCCCCCC
Q 043530 123 PKPWILPPLFQDMNNFLKTSFIEN------AKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPL-VIPIGLLPLYGF 195 (343)
Q Consensus 123 ~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~-v~~VGpl~~~~~ 195 (343)
.. .+.. ........+.+.+. .......+.+++++.++++... +.. .++ +++|||......
T Consensus 154 --~~-~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~-----~~~~v~~vG~~~~~~~ 220 (430)
T 2iyf_A 154 --RQ-TERG-RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DRV-----DEDVYTFVGACQGDRA 220 (430)
T ss_dssp --HH-SHHH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGS-----CTTTEEECCCCC----
T ss_pred --cc-chHH-HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccC-----CCccEEEeCCcCCCCC
Confidence 00 0000 00000000111110 0011146788999988887652 111 356 999998654321
Q ss_pred CCCCcchhhhcCCCCceeEEeccCCccCCHHHHHHHHH------------------------------------------
Q 043530 196 EKSQPLAWLDDQATGSVVDVSFGSRTAMSREQLRELGD------------------------------------------ 233 (343)
Q Consensus 196 ~~~~~~~wl~~~~~~~vVyvs~GS~~~~~~~~~~~l~~------------------------------------------ 233 (343)
+..+|.+..+++++||+++||......+.+.+++.
T Consensus 221 ---~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l 297 (430)
T 2iyf_A 221 ---EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAIL 297 (430)
T ss_dssp ----CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHH
T ss_pred ---CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHh
Confidence 12357665556789999999987444455444432
Q ss_pred ---hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 234 ---GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 234 ---~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
++||||||+||++||+++|+|+|++|..+||..|++++++.|+|+.+ ..+.++.++|+++|+++++|++++
T Consensus 298 ~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~ 371 (430)
T 2iyf_A 298 RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL------ATEEATADLLRETALALVDDPEVA 371 (430)
T ss_dssp TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC------CCC-CCHHHHHHHHHHHHHCHHHH
T ss_pred hccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc------CCCCCCHHHHHHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999999999999998 456789999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 311 IQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 311 ~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
++++++++.+++. ++..+.++.+.+
T Consensus 372 ~~~~~~~~~~~~~----~~~~~~~~~i~~ 396 (430)
T 2iyf_A 372 RRLRRIQAEMAQE----GGTRRAADLIEA 396 (430)
T ss_dssp HHHHHHHHHHHHH----CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 9999999988653 455555555543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=6.5e-30 Score=244.12 Aligned_cols=287 Identities=16% Similarity=0.129 Sum_probs=180.9
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH-------------------h-h----h------c
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV-------------------T-S----S------L 50 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i-------------------~-~----~------~ 50 (343)
...+||+|++.++.||++|+++|+++|+++||+| ++ ..+ . . . .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhcccccccccc
Confidence 3468999999999999999999999999999999 21 100 0 0 0 0
Q ss_pred ------cc-------------C----C-------C-------cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccH
Q 043530 51 ------SL-------------L----P-------S-------LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSA 93 (343)
Q Consensus 51 ------~~-------------l----~-------~-------l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~ 93 (343)
+. + . . +++++||+||+|. ++.++..+|+++|||++.+...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~-~~~~~~~aA~~lgiP~v~~~~~~~ 176 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEP-LTFAAPIAAAVTGTPHARLLWGPD 176 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECT-TCTHHHHHHHHHTCCEEEECSSCC
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecC-cchhHHHHHHHcCCCEEEEecCCC
Confidence 10 1 0 1 2335899999999 667899999999999998865443
Q ss_pred HHHHHHHhhhcccccCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhc---------cCcCEEEEeCcccc
Q 043530 94 KMLTLFVSFHTHTLVGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKM---------TESDGILVNISKTI 164 (343)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~s~~~l 164 (343)
.............. ..|. . . .. . ...+.+.+..... ...+..+....+.+
T Consensus 177 ~~~~~~~~~~~~~~-------~~~~---~---~-~~----~---~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~ 235 (441)
T 2yjn_A 177 ITTRARQNFLGLLP-------DQPE---E---H-RE----D---PLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAI 235 (441)
T ss_dssp HHHHHHHHHHHHGG-------GSCT---T---T-CC----C---HHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGG
T ss_pred cchhhhhhhhhhcc-------cccc---c---c-cc----c---hHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccc
Confidence 21111100000000 0000 0 0 00 0 1111111111111 01233444444444
Q ss_pred cchhHHhhhcCCccCCCCcEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccC-------CHHHHHHHHH----
Q 043530 165 EGKTLAELNGGKVIEGLPLVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAM-------SREQLRELGD---- 233 (343)
Q Consensus 165 e~~~~~~~~~~~~~~~~p~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~-------~~~~~~~l~~---- 233 (343)
+.+ . ..+. ..+++.... .+.+..+|++..+++++|||++||.... -...++.+..
T Consensus 236 ~~~-----~------~~~~-~~~~~~~~~--~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~ 301 (441)
T 2yjn_A 236 RLD-----T------GLKT-VGMRYVDYN--GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAE 301 (441)
T ss_dssp SCC-----C------CCCE-EECCCCCCC--SSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSE
T ss_pred cCC-----C------CCCC-CceeeeCCC--CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCE
Confidence 331 1 1221 233332211 1223467998666778999999998642 1112222221
Q ss_pred -----------------------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhccee
Q 043530 234 -----------------------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGI 278 (343)
Q Consensus 234 -----------------------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~ 278 (343)
++||||||+||++||+++|||+|++|.+.||+.||+++++.|+|+
T Consensus 302 ~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~ 381 (441)
T 2yjn_A 302 IIATFDAQQLEGVANIPDNVRTVGFVPMHALLPTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGI 381 (441)
T ss_dssp EEECCCTTTTSSCSSCCSSEEECCSCCHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEE
T ss_pred EEEEECCcchhhhccCCCCEEEecCCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEE
Confidence 999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 279 WVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 279 ~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
.+ ....++.++|.++|+++|+|++|+++++++++.+++ ..+..+.++.+.+.
T Consensus 382 ~~------~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 382 AL------PVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EPSPAEVVGICEEL 433 (441)
T ss_dssp EC------CTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHHHH
T ss_pred Ec------ccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHH
Confidence 98 456789999999999999999999999999998754 35556666555443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=5e-29 Score=233.44 Aligned_cols=272 Identities=15% Similarity=0.109 Sum_probs=185.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---chH-----------h----hh-----------c-c-----
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---NHV-----------T----SS-----------L-S----- 51 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~~i-----------~----~~-----------~-~----- 51 (343)
|||++++.++.||++|+++|+++|+++||+| ++ ..+ . .. . .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQ 80 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHH
Confidence 5899999999999999999999999999999 21 111 0 00 0 0
Q ss_pred --------------cCCC----cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccccCCCCc
Q 043530 52 --------------LLPS----LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTLVGSKDA 113 (343)
Q Consensus 52 --------------~l~~----l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (343)
.+.. +++.+||+||+|. +..++..+|+++|||++.+...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~-~~~~~~~~a~~~giP~v~~~~~~~~------------------- 140 (384)
T 2p6p_A 81 ARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGT-MSYVAPLLALHLGVPHARQTWDAVD------------------- 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCTHHHHHHHHHTCCEEEECCSSCC-------------------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECc-chhhHHHHHHhcCCCEEEeccCCcc-------------------
Confidence 0011 2345899999998 6668889999999999887643110
Q ss_pred ccCCCCCCCCCCCCCCCcccccchHHHHHHHHH-HhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEEEeccCCC
Q 043530 114 IEMPTLEPIPKPWILPPLFQDMNNFLKTSFIEN-AKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVIPIGLLPL 192 (343)
Q Consensus 114 ~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~~VGpl~~ 192 (343)
+ .. +.... .....+...+. ......++.+++++.+.++.+. .. + .+++.+++.
T Consensus 141 ---~-------~~-~~~~~---~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~---~-~~~~~~~~~--- 194 (384)
T 2p6p_A 141 ---A-------DG-IHPGA---DAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----AA---P-ARMMRHVAT--- 194 (384)
T ss_dssp ---C-------TT-THHHH---HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SC---C-CEECCCCCC---
T ss_pred ---c-------ch-hhHHH---HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CC---C-CCceEecCC---
Confidence 0 00 00000 00000111110 0001125678889888877542 11 0 123344421
Q ss_pred CCCCCCCcchhhhcCCCCceeEEeccCCccC-----CHHHHHHHHH----------------------------------
Q 043530 193 YGFEKSQPLAWLDDQATGSVVDVSFGSRTAM-----SREQLRELGD---------------------------------- 233 (343)
Q Consensus 193 ~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~-----~~~~~~~l~~---------------------------------- 233 (343)
. .+.+..+|++..+++++|||++||.... +.+.+.+++.
T Consensus 195 ~--~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~~~~~ 272 (384)
T 2p6p_A 195 S--RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARVGWTP 272 (384)
T ss_dssp C--CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEEECCC
T ss_pred C--CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEEcCCC
Confidence 1 1223467998755678999999998643 1122221111
Q ss_pred --------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 --------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 --------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
++||||||+||++||+++|||+|++|...||+.||+++++.|+|+.+ .....+.++|.++|+++|.
T Consensus 273 ~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~------~~~~~~~~~l~~~i~~ll~ 346 (384)
T 2p6p_A 273 LDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL------LPGEDSTEAIADSCQELQA 346 (384)
T ss_dssp HHHHGGGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC------CTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec------CcCCCCHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999999999999999998 4567899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 306 NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 306 ~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
|++++++++++++.+++. .+..+.++.+.+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~ 377 (384)
T 2p6p_A 347 KDTYARRAQDLSREISGM----PLPATVVTALEQL 377 (384)
T ss_dssp CHHHHHHHHHHHHHHHTS----CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhC----CCHHHHHHHHHHH
Confidence 999999999999998653 5566666665443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.95 E-value=3.2e-28 Score=229.10 Aligned_cols=270 Identities=11% Similarity=0.072 Sum_probs=163.3
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc-c---hH----------h---------------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS---PE-N---HV----------T--------------------- 47 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~-~---~i----------~--------------------- 47 (343)
.+..+|||+|++.++.||++|++.|+++|.++||+| +. + .+ .
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMP 90 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCC
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccc
Confidence 445689999999999999999999999999999999 21 1 11 0
Q ss_pred -------------------hhcccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcccc
Q 043530 48 -------------------SSLSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHTL 107 (343)
Q Consensus 48 -------------------~~~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 107 (343)
.....+.. +++++||+||+|. ...++..+|+++|||++.+.............
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~-~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~------ 163 (398)
T 4fzr_A 91 REEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTET-YSLTGPLVAATLGIPWIEQSIRLASPELIKSA------ 163 (398)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH------
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECc-cccHHHHHHHhhCCCEEEeccCCCCchhhhHH------
Confidence 00011222 4556899999998 77788999999999998776542111000000
Q ss_pred cCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhh-----ccCcCEEEEeCcccccchhHHhhhcCCccCCCC
Q 043530 108 VGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKK-----MTESDGILVNISKTIEGKTLAELNGGKVIEGLP 182 (343)
Q Consensus 108 ~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p 182 (343)
..+.+.+.... ....+..+......+.... .. ...
T Consensus 164 -------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~ 203 (398)
T 4fzr_A 164 -------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----KP----GTT 203 (398)
T ss_dssp -------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------C----CCE
T ss_pred -------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----CC----CCC
Confidence 00000000000 0111233333333332210 00 000
Q ss_pred cEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccCC--------HHHHHHHHH---------------------
Q 043530 183 LVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAMS--------REQLRELGD--------------------- 233 (343)
Q Consensus 183 ~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~~--------~~~~~~l~~--------------------- 233 (343)
++.++++.. ...+...|+...+++++||+++||..... .+.+.+++.
T Consensus 204 ~~~~~~~~~----~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l 279 (398)
T 4fzr_A 204 KMRYVPYNG----RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTL 279 (398)
T ss_dssp ECCCCCCCC----SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC------
T ss_pred CeeeeCCCC----CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhh
Confidence 112222110 11223567776566789999999884321 111222221
Q ss_pred ----------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcc
Q 043530 234 ----------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIM 291 (343)
Q Consensus 234 ----------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~ 291 (343)
++||||||.||++||+++|||+|++|...||..|+.++++.|+|+.+ .....
T Consensus 280 ~~~~~~v~~~~~~~~~~ll~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~------~~~~~ 353 (398)
T 4fzr_A 280 QPLPEGVLAAGQFPLSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV------PWEQA 353 (398)
T ss_dssp --CCTTEEEESCCCHHHHGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC------C----
T ss_pred ccCCCcEEEeCcCCHHHHHhhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec------CcccC
Confidence 99999999999999999999999999999999999999999999999 56678
Q ss_pred cHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Q 043530 292 KGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTE 336 (343)
Q Consensus 292 t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~ 336 (343)
+.++|.++|+++|+|++++++++++++.+++ +.+..+.++.
T Consensus 354 ~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 394 (398)
T 4fzr_A 354 GVESVLAACARIRDDSSYVGNARRLAAEMAT----LPTPADIVRL 394 (398)
T ss_dssp ---CHHHHHHHHHHCTHHHHHHHHHHHHHTT----SCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc----CCCHHHHHHH
Confidence 9999999999999999999999999988753 3444444443
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.94 E-value=7e-27 Score=219.27 Aligned_cols=269 Identities=14% Similarity=0.088 Sum_probs=178.7
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCC---Cc-c---hH---------h-hh-----------------------
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKS---PE-N---HV---------T-SS----------------------- 49 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~-~---~i---------~-~~----------------------- 49 (343)
+|||+|++.++.||++|++.|+++|.++||+| +. . .+ . ..
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRD 80 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccccc
Confidence 47999999999999999999999999999999 21 1 11 0 00
Q ss_pred ----------------------cccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhccc
Q 043530 50 ----------------------LSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTHT 106 (343)
Q Consensus 50 ----------------------~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 106 (343)
...+.. +++++||+||+|. ...++..+|+++|||++.+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~-~~~~~~~aa~~~giP~v~~~~~~~~~----------- 148 (391)
T 3tsa_A 81 TEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDV-CALIGRVLGGLLDLPVVLHRWGVDPT----------- 148 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHTTCCEEEECCSCCCT-----------
T ss_pred chhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCc-chhHHHHHHHHhCCCEEEEecCCccc-----------
Confidence 111122 4566999999998 77778889999999998775432100
Q ss_pred ccCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhc-----cCcCEEEEeCcccccchhHHhhhcCCccCCC
Q 043530 107 LVGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKM-----TESDGILVNISKTIEGKTLAELNGGKVIEGL 181 (343)
Q Consensus 107 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 181 (343)
... ......+++.+..... ...+..+.....+++... .. ..
T Consensus 149 ----------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~ 194 (391)
T 3tsa_A 149 ----------------------AGP---FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASD-----AP----QG 194 (391)
T ss_dssp ----------------------TTH---HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT-----SC----CC
T ss_pred ----------------------ccc---ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCC-----CC----cc
Confidence 000 0001111111111111 112444444434333221 00 01
Q ss_pred CcEEEeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCcc---CCHHHHHHHH--H-----------------------
Q 043530 182 PLVIPIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTA---MSREQLRELG--D----------------------- 233 (343)
Q Consensus 182 p~v~~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~---~~~~~~~~l~--~----------------------- 233 (343)
.++.++ |.. .......|+...+++++||+++||... ...+.+..+. .
T Consensus 195 ~~~~~~-p~~----~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~~~~l~~~~ 269 (391)
T 3tsa_A 195 APVQYV-PYN----GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLP 269 (391)
T ss_dssp EECCCC-CCC----CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGGGGGCTTCC
T ss_pred CCeeee-cCC----CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcchhhcccCC
Confidence 112223 111 111224687766667899999999842 2133232221 1
Q ss_pred ------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCc--CcccH
Q 043530 234 ------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGE--AIMKG 293 (343)
Q Consensus 234 ------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~--~~~t~ 293 (343)
++||||||.||++||+++|+|+|++|...||..|+.++++.|+|+.+ .. ...+.
T Consensus 270 ~~v~~~~~~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~------~~~~~~~~~ 343 (391)
T 3tsa_A 270 DNARIAESVPLNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL------PDEQAQSDH 343 (391)
T ss_dssp TTEEECCSCCGGGTGGGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC------CSHHHHTCH
T ss_pred CCEEEeccCCHHHHHhhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec------CcccccCCH
Confidence 99999999999999999999999999999999999999999999998 44 56899
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 294 EQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 294 ~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
++|.++|+++|+|++++++++++++.+.+ +.+..+.++.+.+
T Consensus 344 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 385 (391)
T 3tsa_A 344 EQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALVRTLEN 385 (391)
T ss_dssp HHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHHHHHHH
Confidence 99999999999999999999999888743 4566666665543
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.94 E-value=1.6e-27 Score=224.39 Aligned_cols=272 Identities=15% Similarity=0.131 Sum_probs=170.1
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC---Ccc---hH----------h----------------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS---PEN---HV----------T---------------------- 47 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~~~---~i----------~---------------------- 47 (343)
.+...|||+|++.++.||++|++.|+++|.++||+| +.+ .+ .
T Consensus 16 ~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 16 IEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp ---CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEESSCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred hhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEeccchHHHHHhCCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 334568999999999999999999999999999999 211 00 0
Q ss_pred ---------------------hhcccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcc
Q 043530 48 ---------------------SSLSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTH 105 (343)
Q Consensus 48 ---------------------~~~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 105 (343)
.....+.. +++++||+||+|. ...++..+|+++|||++.+........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~-~~~~~~~aA~~~giP~v~~~~~~~~~~--------- 165 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQ-GATVGLLAADRAGVPAVQRNQSAWRTR--------- 165 (398)
T ss_dssp GGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHHTCCEEEECCTTCCCT---------
T ss_pred ccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECc-hhhHHHHHHHHcCCCEEEEeccCCCcc---------
Confidence 00001111 4456899999998 777888999999999987653311000
Q ss_pred cccCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhhccCcCEEEEeCcccccchhHHhhhcCCccCCCCcEE
Q 043530 106 TLVGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKKMTESDGILVNISKTIEGKTLAELNGGKVIEGLPLVI 185 (343)
Q Consensus 106 ~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~p~v~ 185 (343)
. ........ +...+.+........+..+......+..+ ... ... ++.
T Consensus 166 --------------------~-~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~-~~~ 212 (398)
T 3oti_A 166 --------------------G-MHRSIASF---LTDLMDKHQVSLPEPVATIESFPPSLLLE-----AEP---EGW-FMR 212 (398)
T ss_dssp --------------------T-HHHHHHTT---CHHHHHHTTCCCCCCSEEECSSCGGGGTT-----SCC---CSB-CCC
T ss_pred --------------------c-hhhHHHHH---HHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----CCC---CCC-Ccc
Confidence 0 00000000 00011110000111233333332222221 000 001 111
Q ss_pred EeccCCCCCCCCCCcchhhhcCCCCceeEEeccCCccC--CHHHHHHHHH------------------------------
Q 043530 186 PIGLLPLYGFEKSQPLAWLDDQATGSVVDVSFGSRTAM--SREQLRELGD------------------------------ 233 (343)
Q Consensus 186 ~VGpl~~~~~~~~~~~~wl~~~~~~~vVyvs~GS~~~~--~~~~~~~l~~------------------------------ 233 (343)
++ |. ........|+...+++++||+++||.... ..+.+.+++.
T Consensus 213 ~~-~~----~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~ 287 (398)
T 3oti_A 213 WV-PY----GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRA 287 (398)
T ss_dssp CC-CC----CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEE
T ss_pred cc-CC----CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEE
Confidence 11 10 01112245776666678999999998431 2222222221
Q ss_pred -------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHH--HHHHHhcceeeeeccCCCCcCcccHHHHHH
Q 043530 234 -------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINA--DVVERTGMGIWVQSWGWGGEAIMKGEQIAE 298 (343)
Q Consensus 234 -------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na--~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ 298 (343)
++||||||.||++||+++|||+|++|+..||..|+ .++++.|+|+.+ .....+.+.|.
T Consensus 288 ~~~~~~~~ll~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~------~~~~~~~~~l~- 360 (398)
T 3oti_A 288 VGWTPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS------TSDKVDADLLR- 360 (398)
T ss_dssp ESSCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC------CGGGCCHHHHH-
T ss_pred EccCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee------CCCCCCHHHHH-
Confidence 99999999999999999999999999999999999 999999999999 45667887777
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 299 NISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 299 ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
++++|++|+++++++++.+++ ..+..+.++.+.+
T Consensus 361 ---~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~ 394 (398)
T 3oti_A 361 ---RLIGDESLRTAAREVREEMVA----LPTPAETVRRIVE 394 (398)
T ss_dssp ---HHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHHH
T ss_pred ---HHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHHHH
Confidence 888999999999999998754 3555565555543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.93 E-value=1.9e-24 Score=203.85 Aligned_cols=276 Identities=15% Similarity=0.140 Sum_probs=180.4
Q ss_pred CCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC---C-cc---hH----------hh--------------------
Q 043530 6 ELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS---P-EN---HV----------TS-------------------- 48 (343)
Q Consensus 6 ~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V---~-~~---~i----------~~-------------------- 48 (343)
.+..+|||++++.++.||++|++.|+++|.++||+| + ++ .+ ..
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCc
Confidence 444689999999999999999999999999999999 2 11 11 00
Q ss_pred -------------h---------cccCCC-cCCCCCCEEEECCCCccchHHHHHHcCCCcEEEecccHHHHHHHHhhhcc
Q 043530 49 -------------S---------LSLLPS-LSSPPLSAPVTDMTLTASVLPISRAINVPNYIFFTSSAKMLTLFVSFHTH 105 (343)
Q Consensus 49 -------------~---------~~~l~~-l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 105 (343)
. ...+.. +++.+||+||+|. ...++..+|+++|||+|.+..........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~-~~~~~~~aa~~~giP~v~~~~~~~~~~~~------- 167 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEI-SNYGAGLAALKAGIPTICHGVGRDTPDDL------- 167 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEET-TCHHHHHHHHHHTCCEEEECCSCCCCSHH-------
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECc-hhhHHHHHHHHcCCCEEEecccccCchhh-------
Confidence 0 011111 4455999999997 66678889999999988765442110000
Q ss_pred cccCCCCcccCCCCCCCCCCCCCCCcccccchHHHHHHHHHHhh----------ccCcCEEEEeCcccccchhHHhhhcC
Q 043530 106 TLVGSKDAIEMPTLEPIPKPWILPPLFQDMNNFLKTSFIENAKK----------MTESDGILVNISKTIEGKTLAELNGG 175 (343)
Q Consensus 106 ~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~le~~~~~~~~~~ 175 (343)
...+.+.+.+.... ...++.++..+-.+++......
T Consensus 168 ------------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~---- 213 (412)
T 3otg_A 168 ------------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA---- 213 (412)
T ss_dssp ------------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHT----
T ss_pred ------------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccC----
Confidence 00000000000000 1233445555444444321100
Q ss_pred CccCCCCcEEEeccCCCCCCCCCCcchh-hhcCCCCceeEEeccCCccCCHHHHHHHHH---------------------
Q 043530 176 KVIEGLPLVIPIGLLPLYGFEKSQPLAW-LDDQATGSVVDVSFGSRTAMSREQLRELGD--------------------- 233 (343)
Q Consensus 176 ~~~~~~p~v~~VGpl~~~~~~~~~~~~w-l~~~~~~~vVyvs~GS~~~~~~~~~~~l~~--------------------- 233 (343)
......+-+.... ...+..+| ....+++++||+++||......+.+.+++.
T Consensus 214 -----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 286 (412)
T 3otg_A 214 -----RPRRHELRPVPFA--EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG 286 (412)
T ss_dssp -----CTTEEECCCCCCC--CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT
T ss_pred -----CCCcceeeccCCC--CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh
Confidence 0111122111111 11122456 333345678999999886444554444432
Q ss_pred -----------------------hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCc
Q 043530 234 -----------------------GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAI 290 (343)
Q Consensus 234 -----------------------~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~ 290 (343)
++||+|||+||++||+++|+|+|++|...||..|+..+++.|.|+.+ ..+.
T Consensus 287 l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~------~~~~ 360 (412)
T 3otg_A 287 LGEVPANVRLESWVPQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL------LPDN 360 (412)
T ss_dssp CCCCCTTEEEESCCCHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC------CGGG
T ss_pred hccCCCcEEEeCCCCHHHHHhcCcEEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec------Cccc
Confidence 99999999999999999999999999999999999999999999999 4567
Q ss_pred ccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 291 MKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 291 ~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
.++++|+++|++++.|+++++++.+.++.+.+ ..+..+.++.+.+.
T Consensus 361 ~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l 406 (412)
T 3otg_A 361 ISPDSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLLPGF 406 (412)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHH
Confidence 89999999999999999999999998888754 35566665555443
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.85 E-value=3.1e-21 Score=159.98 Aligned_cols=116 Identities=18% Similarity=0.323 Sum_probs=94.4
Q ss_pred chhhhcCCCCceeEEeccCCc-cCCHHHHHHHHH------------------------------------------hhcc
Q 043530 201 LAWLDDQATGSVVDVSFGSRT-AMSREQLRELGD------------------------------------------GGFL 237 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~-~~~~~~~~~l~~------------------------------------------~~fv 237 (343)
.+|++..+++++|||++||.. ....+.+..++. ++||
T Consensus 12 ~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I 91 (170)
T 2o6l_A 12 EDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFI 91 (170)
T ss_dssp HHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEE
T ss_pred HHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEE
Confidence 667776655677888888774 234444443332 7899
Q ss_pred cccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 238 TYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 238 tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
||||+||++||+++|+|+|++|...||..||+++++.|+|+.+ ....++.++|.++|++++.|++||+++++++
T Consensus 92 ~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~------~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~ 165 (170)
T 2o6l_A 92 THGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV------DFNTMSSTDLLNALKRVINDPSYKENVMKLS 165 (170)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC------CTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred EcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe------ccccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 4567899999999999999999999999999
Q ss_pred HHHHH
Q 043530 318 EEART 322 (343)
Q Consensus 318 ~~~~~ 322 (343)
+.+++
T Consensus 166 ~~~~~ 170 (170)
T 2o6l_A 166 RIQHD 170 (170)
T ss_dssp -----
T ss_pred HHhhC
Confidence 98864
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.85 E-value=1.3e-20 Score=175.32 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=66.8
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCC----cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQH----GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~----~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+++.|+|+.+ ....+|+++|.++|.+++.|++.
T Consensus 254 DlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l------~~~~~~~~~L~~~i~~ll~d~~~ 327 (365)
T 3s2u_A 254 DLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL------PQKSTGAAELAAQLSEVLMHPET 327 (365)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC------CTTTCCHHHHHHHHHHHHHCTHH
T ss_pred eEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe------ecCCCCHHHHHHHHHHHHCCHHH
Confidence 9999999999999999999999999863 5899999999999999999 56789999999999999999876
Q ss_pred HHHHHH
Q 043530 310 RIQEMR 315 (343)
Q Consensus 310 r~~a~~ 315 (343)
+++..+
T Consensus 328 ~~~m~~ 333 (365)
T 3s2u_A 328 LRSMAD 333 (365)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554333
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.51 E-value=5.7e-13 Score=122.93 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=75.6
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCC---cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQH---GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~---~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
++||+++|.++++||+++|+|+|+.|.. .||..|+..+++.|.|..+ .....+.++++++|.++ |++.+
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~------~~~d~~~~~la~~i~~l--~~~~~ 327 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII------EQPQLSVDAVANTLAGW--SRETL 327 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC------CGGGCCHHHHHHHHHTC--CHHHH
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEe------ccccCCHHHHHHHHHhc--CHHHH
Confidence 9999999999999999999999999987 7999999999999999888 45567799999999988 88777
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 311 IQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 311 ~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
++..+-+... .+..+.++.++.+.+.
T Consensus 328 ~~~~~~~~~~----~~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 328 LTMAERARAA----SIPDATERVANEVSRV 353 (364)
T ss_dssp HHHHHHHHHT----CCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----hccCHHHHHHHHHHHH
Confidence 6655544332 2345555555555443
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=98.90 E-value=4.8e-10 Score=95.99 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=51.8
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCC----cchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQH----GDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEM 303 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~----~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~v 303 (343)
+++|||||.||++|++++|||+|++|.. .||..||+++++.|+++.+ +.++|.++|+++
T Consensus 134 dlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~-----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 134 DLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC-----------APTETGLIAGLR 196 (224)
T ss_dssp SCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE-----------CSCTTTHHHHHH
T ss_pred CEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc-----------CHHHHHHHHHHH
Confidence 9999999999999999999999999974 3699999999999998654 456777777776
No 24
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.08 E-value=0.00026 Score=65.01 Aligned_cols=61 Identities=20% Similarity=0.167 Sum_probs=43.6
Q ss_pred ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 239 YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 239 HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
-|.-++++||+++|+|+|+.+..+- ...+ +.|.|..+ ..-+.++++++|.+++.|++.+++
T Consensus 290 e~~~~~~~Ea~a~G~PvI~~~~~~~----~e~i-~~~~g~~~--------~~~d~~~l~~~i~~l~~~~~~~~~ 350 (394)
T 3okp_A 290 EGLGIVYLEAQACGVPVIAGTSGGA----PETV-TPATGLVV--------EGSDVDKLSELLIELLDDPIRRAA 350 (394)
T ss_dssp CSSCHHHHHHHHTTCCEEECSSTTG----GGGC-CTTTEEEC--------CTTCHHHHHHHHHHHHTCHHHHHH
T ss_pred cccCcHHHHHHHcCCCEEEeCCCCh----HHHH-hcCCceEe--------CCCCHHHHHHHHHHHHhCHHHHHH
Confidence 5666789999999999999765332 2222 23467666 234789999999999998765443
No 25
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.94 E-value=6.4e-06 Score=73.03 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=45.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeee
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQ 281 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~ 281 (343)
+++||+|| +|+.|+++.|+|++.+|...+|..||+.+++.|+++.+.
T Consensus 227 DlvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 227 NKLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYK 273 (282)
T ss_dssp EEEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECG
T ss_pred CEEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcc
Confidence 99999999 899999999999999999999999999999999999883
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=97.25 E-value=0.00034 Score=64.04 Aligned_cols=88 Identities=11% Similarity=0.026 Sum_probs=61.4
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
++||+.+| |.++||+++|+|+|+.+..+++.. +.+.|.|+.+ . .+.++|+++|.+++.|++.+++.
T Consensus 276 d~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv------~---~d~~~la~~i~~ll~d~~~~~~~ 341 (376)
T 1v4v_A 276 LLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLA------G---TDPEGVYRVVKGLLENPEELSRM 341 (376)
T ss_dssp EEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEEC------C---SCHHHHHHHHHHHHTCHHHHHHH
T ss_pred cEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEEC------C---CCHHHHHHHHHHHHhChHhhhhh
Confidence 89998884 346699999999999887677665 3456888776 2 38999999999999998766554
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 314 MRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 314 ~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
.+.++ ....++++.+.++.+.+
T Consensus 342 ~~~~~----~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 342 RKAKN----PYGDGKAGLMVARGVAW 363 (376)
T ss_dssp HHSCC----SSCCSCHHHHHHHHHHH
T ss_pred cccCC----CCCCChHHHHHHHHHHH
Confidence 43221 12344555555554443
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=96.99 E-value=0.00055 Score=63.82 Aligned_cols=90 Identities=14% Similarity=0.099 Sum_probs=64.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
+++|+-.|.. +.||.++|+|+|+.|-.++++. +++.|.|+.+ . .++++|.+++.+++.|++.+++.
T Consensus 303 d~vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv------~---~d~~~l~~ai~~ll~~~~~~~~m 368 (403)
T 3ot5_A 303 YLVFTDSGGV-QEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLI------G---TNKENLIKEALDLLDNKESHDKM 368 (403)
T ss_dssp EEEEECCHHH-HHHGGGTTCCEEECCSSCSCHH----HHHHTSEEEC------C---SCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CEEEECCccH-HHHHHHhCCCEEEecCCCcchh----heeCCcEEEc------C---CCHHHHHHHHHHHHcCHHHHHHH
Confidence 8888887533 3799999999999976666654 3567888776 2 28999999999999998877655
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 314 MRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 314 ~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
.+-+.. ..+|+++++-++.+.+.+
T Consensus 369 ~~~~~~----~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 369 AQAANP----YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHSCCT----TCCSCHHHHHHHHHHHHH
T ss_pred HhhcCc----ccCCcHHHHHHHHHHHHh
Confidence 432222 255677666666665544
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.85 E-value=0.002 Score=52.41 Aligned_cols=83 Identities=20% Similarity=0.142 Sum_probs=54.3
Q ss_pred CCHHHHHHHHH--hhccc---ccC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHH
Q 043530 223 MSREQLRELGD--GGFLT---YCG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQI 296 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvt---HgG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l 296 (343)
.+.+++.++.. +++|. +.| -++++||+++|+|+|+... ..+...+.+.+.|+.+ .-+.+++
T Consensus 86 ~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~---------~~d~~~l 152 (177)
T 2f9f_A 86 VSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV---------NADVNEI 152 (177)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE---------CSCHHHH
T ss_pred CCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe---------CCCHHHH
Confidence 34444444443 44443 223 3589999999999999753 4445555555567655 2478999
Q ss_pred HHHHHHHhCCHHH-HHHHHHHHH
Q 043530 297 AENISEMMGNELL-RIQEMRIRE 318 (343)
Q Consensus 297 ~~ai~~vl~~~~~-r~~a~~l~~ 318 (343)
+++|.++++|++. ++++++.++
T Consensus 153 ~~~i~~l~~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 153 IDAMKKVSKNPDKFKKDCFRRAK 175 (177)
T ss_dssp HHHHHHHHHCTTTTHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHh
Confidence 9999999987765 555555443
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=96.84 E-value=0.00059 Score=62.55 Aligned_cols=74 Identities=19% Similarity=0.094 Sum_probs=54.9
Q ss_pred HHHHHHHH--hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHH
Q 043530 226 EQLRELGD--GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEM 303 (343)
Q Consensus 226 ~~~~~l~~--~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~v 303 (343)
+++.++.. ++||+.+|. .++||+++|+|+|+.+..+++. .+.+.|.|+.+ .. +.++++++|.++
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv------~~---d~~~la~~i~~l 339 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLV------GT---DKQRIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEE------CS---SHHHHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEe------CC---CHHHHHHHHHHH
Confidence 34444433 889998864 4889999999999998754433 34566888887 22 899999999999
Q ss_pred hCCHHHHHHH
Q 043530 304 MGNELLRIQE 313 (343)
Q Consensus 304 l~~~~~r~~a 313 (343)
++|++.+++.
T Consensus 340 l~d~~~~~~~ 349 (384)
T 1vgv_A 340 LKDENEYQAM 349 (384)
T ss_dssp HHCHHHHHHH
T ss_pred HhChHHHhhh
Confidence 9988665543
No 30
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.60 E-value=0.012 Score=59.04 Aligned_cols=64 Identities=11% Similarity=0.191 Sum_probs=39.7
Q ss_pred ccChhHHHHHHHhCceEEeccCCcchh---HHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 239 YCGWNSVTKAMWNGVQVLAWPQHGDQK---INADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 239 HgG~~s~~eal~~GVP~l~~P~~~DQ~---~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
.+|.+|+.|||+.|||+|++| ++++ .-+..+...|+.-.+ .-+.++-.+.--++-.|++.+++.
T Consensus 609 ~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~~gl~e~i---------a~~~~~Y~~~a~~la~d~~~l~~l 675 (723)
T 4gyw_A 609 CNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTCLGCLELI---------AKNRQEYEDIAVKLGTDLEYLKKV 675 (723)
T ss_dssp SCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHHHTCGGGB---------CSSHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHHcCCcccc---------cCCHHHHHHHHHHHhcCHHHHHHH
Confidence 689999999999999999999 3322 222234444665444 234444444444666676655444
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=96.48 E-value=0.0011 Score=61.72 Aligned_cols=68 Identities=19% Similarity=0.140 Sum_probs=52.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
++||+-.| |.+.||.++|+|+|+..-..+++ .+++.|.++.+ . .++++|.+++.+++.|++.+++.
T Consensus 309 d~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv------~---~d~~~l~~ai~~ll~d~~~~~~m 374 (396)
T 3dzc_A 309 HIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLV------G---TNQQQICDALSLLLTDPQAYQAM 374 (396)
T ss_dssp SEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEEC------T---TCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEc------C---CCHHHHHHHHHHHHcCHHHHHHH
Confidence 88999887 55579999999999985555543 24567887655 2 26999999999999998876655
Q ss_pred HH
Q 043530 314 MR 315 (343)
Q Consensus 314 ~~ 315 (343)
.+
T Consensus 375 ~~ 376 (396)
T 3dzc_A 375 SQ 376 (396)
T ss_dssp HT
T ss_pred hh
Confidence 44
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.48 E-value=0.014 Score=52.79 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=54.5
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++|. .|.-++++||+++|+|+|+.+.. .+...+.+.+.|..++ ..-+.++++++|.++++|++.
T Consensus 272 d~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~-------~~~~~~~l~~~i~~l~~~~~~ 340 (374)
T 2iw1_A 272 DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVIA-------EPFSQEQLNEVLRKALTQSPL 340 (374)
T ss_dssp SEEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEEC-------SSCCHHHHHHHHHHHHHCHHH
T ss_pred CEEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEeC-------CCCCHHHHHHHHHHHHcChHH
Confidence 55664 46678899999999999997653 4455666778898882 245789999999999998876
Q ss_pred HHHHHHHHH
Q 043530 310 RIQEMRIRE 318 (343)
Q Consensus 310 r~~a~~l~~ 318 (343)
+++..+-+.
T Consensus 341 ~~~~~~~~~ 349 (374)
T 2iw1_A 341 RMAWAENAR 349 (374)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655444333
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=96.31 E-value=0.0036 Score=56.97 Aligned_cols=89 Identities=16% Similarity=0.127 Sum_probs=59.1
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQE 313 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a 313 (343)
++||+..| +.++||+++|+|+|+....+.. ..+.+.|.|+.+ . . +.++++++|.++++|++.+++.
T Consensus 284 d~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v------~--~-d~~~la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 284 YLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLA------G--T-DEETIFSLADELLSDKEAHDKM 349 (375)
T ss_dssp SEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEEC------C--S-CHHHHHHHHHHHHHCHHHHHHH
T ss_pred cEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEc------C--C-CHHHHHHHHHHHHhChHhHhhh
Confidence 88888874 4588999999999998643443 234566888776 2 2 8899999999999988766543
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 314 MRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 314 ~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
.+ ..++. .++.+.++.++.+.+.
T Consensus 350 ~~---~~~~~-~~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 350 SK---ASNPY-GDGRASERIVEAILKH 372 (375)
T ss_dssp CC---CCCTT-CCSCHHHHHHHHHHHH
T ss_pred hh---cCCCC-CCCcHHHHHHHHHHHH
Confidence 32 22222 2345545545544443
No 34
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.26 E-value=0.036 Score=51.42 Aligned_cols=78 Identities=14% Similarity=0.022 Sum_probs=52.9
Q ss_pred CCHHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHH
Q 043530 223 MSREQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQI 296 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l 296 (343)
.+.+++.++.. ++||.- |.-++++||+++|+|+|+.+. ......+.+.+.|+.++ .-+.+++
T Consensus 314 ~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~--------~~d~~~l 381 (438)
T 3c48_A 314 RPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGLLVD--------GHSPHAW 381 (438)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEEEES--------SCCHHHH
T ss_pred CChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEEECC--------CCCHHHH
Confidence 34455555443 566543 335689999999999999764 33444444556787772 3478999
Q ss_pred HHHHHHHhCCHHHHHH
Q 043530 297 AENISEMMGNELLRIQ 312 (343)
Q Consensus 297 ~~ai~~vl~~~~~r~~ 312 (343)
+++|.++++|++.+++
T Consensus 382 a~~i~~l~~~~~~~~~ 397 (438)
T 3c48_A 382 ADALATLLDDDETRIR 397 (438)
T ss_dssp HHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHcCHHHHHH
Confidence 9999999998765443
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=96.14 E-value=0.039 Score=50.86 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=58.0
Q ss_pred ceeEEeccCCccCCHHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccC
Q 043530 211 SVVDVSFGSRTAMSREQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWG 284 (343)
Q Consensus 211 ~vVyvs~GS~~~~~~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~ 284 (343)
.|.+. |.....+.+++.++.. ++||.- |.-++++||+++|+|+|+.+. ..+...+.+.+.|..+
T Consensus 294 ~V~~~--G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~---- 363 (416)
T 2x6q_A 294 DVKVL--TNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLV---- 363 (416)
T ss_dssp TEEEE--EGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEE----
T ss_pred cEEEe--cccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEE----
Confidence 35554 3233344555555543 666643 345688999999999999764 3444455555678777
Q ss_pred CCCcCcccHHHHHHHHHHHhCCHHHHHH
Q 043530 285 WGGEAIMKGEQIAENISEMMGNELLRIQ 312 (343)
Q Consensus 285 ~~~~~~~t~~~l~~ai~~vl~~~~~r~~ 312 (343)
+ +.++++++|.+++.|++.+++
T Consensus 364 --~----d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 364 --R----DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp --S----SHHHHHHHHHHHHHCHHHHHH
T ss_pred --C----CHHHHHHHHHHHHhCHHHHHH
Confidence 3 789999999999998875544
No 36
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.12 E-value=0.054 Score=49.46 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=52.6
Q ss_pred CHHHHHHHHH--hhccc----ccC-hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHH
Q 043530 224 SREQLRELGD--GGFLT----YCG-WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQI 296 (343)
Q Consensus 224 ~~~~~~~l~~--~~fvt----HgG-~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l 296 (343)
+.+++.++.. +++|. +-| -++++||+++|+|+|+.+. ......+.+.+.|..++ .-+.+++
T Consensus 272 ~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~--------~~d~~~l 339 (406)
T 2gek_A 272 DDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVP--------VDDADGM 339 (406)
T ss_dssp CHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECC--------TTCHHHH
T ss_pred CHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeC--------CCCHHHH
Confidence 3344444433 66663 334 3489999999999999754 45555566556777662 3478999
Q ss_pred HHHHHHHhCCHHHHHH
Q 043530 297 AENISEMMGNELLRIQ 312 (343)
Q Consensus 297 ~~ai~~vl~~~~~r~~ 312 (343)
+++|.+++.|++.+++
T Consensus 340 ~~~i~~l~~~~~~~~~ 355 (406)
T 2gek_A 340 AAALIGILEDDQLRAG 355 (406)
T ss_dssp HHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHcCHHHHHH
Confidence 9999999998875544
No 37
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.07 E-value=0.01 Score=54.55 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=51.1
Q ss_pred ChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC---HHHHHHHHHHH
Q 043530 241 GWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN---ELLRIQEMRIR 317 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~---~~~r~~a~~l~ 317 (343)
|.++++||+++|+|+|+-|-..+.......+.+.|.++.. -+.++++++|.+++.| .++.+++++..
T Consensus 291 gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~----------~d~~~La~ai~~ll~d~~r~~mg~~ar~~~ 360 (374)
T 2xci_A 291 GGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV----------KNETELVTKLTELLSVKKEIKVEEKSREIK 360 (374)
T ss_dssp CCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC----------CSHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe----------CCHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4478999999999999877777766666666667877665 1578999999999987 23555565554
Q ss_pred HH
Q 043530 318 EE 319 (343)
Q Consensus 318 ~~ 319 (343)
+.
T Consensus 361 ~~ 362 (374)
T 2xci_A 361 GC 362 (374)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 38
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=95.77 E-value=0.019 Score=52.62 Aligned_cols=67 Identities=16% Similarity=0.159 Sum_probs=47.3
Q ss_pred hhcc----cccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFL----TYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fv----tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
++|| ..|.-++++||+++|+|+|+.+..+ ....+.+.+.|..++ .-+.++++++|.+++.|++.
T Consensus 286 dv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~--------~~d~~~la~~i~~l~~~~~~ 353 (394)
T 2jjm_A 286 DLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCE--------VGDTTGVADQAIQLLKDEEL 353 (394)
T ss_dssp SEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEEC--------TTCHHHHHHHHHHHHHCHHH
T ss_pred CEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeC--------CCCHHHHHHHHHHHHcCHHH
Confidence 6666 4566778999999999999987532 222233335677662 23789999999999998765
Q ss_pred HHH
Q 043530 310 RIQ 312 (343)
Q Consensus 310 r~~ 312 (343)
+++
T Consensus 354 ~~~ 356 (394)
T 2jjm_A 354 HRN 356 (394)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=95.61 E-value=0.069 Score=51.98 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=45.3
Q ss_pred cccChhHHHHHHHhCceEEeccCCcchhHHH-HHHHHhcceee-eeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHH
Q 043530 238 TYCGWNSVTKAMWNGVQVLAWPQHGDQKINA-DVVERTGMGIW-VQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMR 315 (343)
Q Consensus 238 tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na-~~v~~~G~G~~-l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~ 315 (343)
..+|.+|++|||++|||+|+++--.=--..+ ..+...|+.-. + .-+.++..+...++..|++.+++.++
T Consensus 527 py~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI---------A~d~eeYv~~Av~La~D~~~l~~LR~ 597 (631)
T 3q3e_A 527 PFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI---------ANTVDEYVERAVRLAENHQERLELRR 597 (631)
T ss_dssp SSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE---------ESSHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee---------cCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4478899999999999999987322111121 22333455432 3 23678888888899989887665543
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.43 E-value=0.074 Score=51.27 Aligned_cols=103 Identities=11% Similarity=0.092 Sum_probs=61.5
Q ss_pred CHHHHHHHHH--hhcc---cccChhHHHHHHHhCceEEeccCCcchh-HHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 224 SREQLRELGD--GGFL---TYCGWNSVTKAMWNGVQVLAWPQHGDQK-INADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 224 ~~~~~~~l~~--~~fv---tHgG~~s~~eal~~GVP~l~~P~~~DQ~-~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
+.+++.++.. ++|| ..|+.++++||+++|+|+|+.|-..=.. ..+..+...|+.-.+ .. +.++++
T Consensus 443 ~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v------~~---~~~~la 513 (568)
T 2vsy_A 443 PHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN------VA---DDAAFV 513 (568)
T ss_dssp CHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB------CS---SHHHHH
T ss_pred CHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh------cC---CHHHHH
Confidence 4344444433 5554 1266778999999999999977431111 123445555766555 11 899999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHH
Q 043530 298 ENISEMMGNELLRIQEMRIREEARTAI--EQGGSLKKRLTELV 338 (343)
Q Consensus 298 ~ai~~vl~~~~~r~~a~~l~~~~~~a~--~~gg~~~~~~~~~~ 338 (343)
++|.+++.|++.+++.. +..++.. .+.-+.....+.+.
T Consensus 514 ~~i~~l~~~~~~~~~~~---~~~~~~~~~~~~f~~~~~~~~~~ 553 (568)
T 2vsy_A 514 AKAVALASDPAALTALH---ARVDVLRRASGVFHMDGFADDFG 553 (568)
T ss_dssp HHHHHHHHCHHHHHHHH---HHHHHHHHHSSTTCHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHH---HHHHHhhhcCCCCCHHHHHHHHH
Confidence 99999999987665433 3333332 34444444444443
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=95.34 E-value=0.1 Score=47.84 Aligned_cols=100 Identities=9% Similarity=0.072 Sum_probs=58.4
Q ss_pred CCHHHHHHHHH--hhcc----cccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcc----------------ee--
Q 043530 223 MSREQLRELGD--GGFL----TYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGM----------------GI-- 278 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fv----tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~----------------G~-- 278 (343)
.+.+++.++.. ++|| .-|.-++++||+++|+|+|+-.. ..+...+ ..|. |+
T Consensus 262 ~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~~~i~~~~~~~~~~~~G~~g 336 (413)
T 3oy2_A 262 LTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SGDCVYKIKPSAWISVDDRDGIGG 336 (413)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CTTTSEEECCCEEEECTTTCSSCC
T ss_pred CCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-ccCcccccccccccccccccCcce
Confidence 34555555444 5555 23445689999999999999643 2333333 2333 44
Q ss_pred eeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 043530 279 WVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVE 339 (343)
Q Consensus 279 ~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~ 339 (343)
.+ ..-+.++++++| +++.|++.+++.. +..++...+.-+.+...+++.+
T Consensus 337 l~--------~~~d~~~la~~i-~l~~~~~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 337 IE--------GIIDVDDLVEAF-TFFKDEKNRKEYG---KRVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp EE--------EECCHHHHHHHH-HHTTSHHHHHHHH---HHHHHHHTTSCCHHHHHHHHHH
T ss_pred ee--------CCCCHHHHHHHH-HHhcCHHHHHHHH---HHHHHHHHHhCCHHHHHHHHHH
Confidence 44 123899999999 9999887654333 3333333334454554444443
No 42
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=95.30 E-value=0.0078 Score=55.62 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=47.8
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELL 309 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~ 309 (343)
+++||-.|. .+.||.+.|+|+|.++-..+.+. .++.|.++.+ + .++++|.+++.+++.|+..
T Consensus 284 dlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv------~---~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 284 FCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMS------G---FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp SEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEEC------C---SSHHHHHHHHHHHHTTCBT
T ss_pred cEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEc------C---CCHHHHHHHHHHHHhChHH
Confidence 888888776 46999999999999987554222 3567877666 2 3799999999999987643
No 43
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.21 E-value=0.068 Score=43.63 Aligned_cols=59 Identities=17% Similarity=0.049 Sum_probs=43.5
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-CHHHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-NELLRIQE 313 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~~~~r~~a 313 (343)
-++++||+++|+|+|+... ..+...+ +.+.|..++ .-+.++++++|.+++. |++.+++.
T Consensus 129 ~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~--------~~~~~~l~~~i~~l~~~~~~~~~~~ 188 (200)
T 2bfw_A 129 GLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVK--------AGDPGELANAILKALELSRSDLSKF 188 (200)
T ss_dssp CHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEEC--------TTCHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEec--------CCCHHHHHHHHHHHHhcCHHHHHHH
Confidence 4678999999999999753 3444444 456777772 3378999999999998 87655443
No 44
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=94.99 E-value=0.11 Score=49.05 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=42.9
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHH
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRI 311 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~ 311 (343)
-++++||+++|+|+|+-.. ......+.+...|+.++ .-+.++++++|.+++.|++.++
T Consensus 372 ~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~g~l~~--------~~d~~~la~~i~~ll~~~~~~~ 429 (499)
T 2r60_A 372 GLAPVEAMASGLPAVVTRN----GGPAEILDGGKYGVLVD--------PEDPEDIARGLLKAFESEETWS 429 (499)
T ss_dssp CSHHHHHHHTTCCEEEESS----BHHHHHTGGGTSSEEEC--------TTCHHHHHHHHHHHHSCHHHHH
T ss_pred CcHHHHHHHcCCCEEEecC----CCHHHHhcCCceEEEeC--------CCCHHHHHHHHHHHHhCHHHHH
Confidence 4688999999999999753 33444444445787772 3478999999999999876544
No 45
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=94.98 E-value=0.047 Score=49.37 Aligned_cols=101 Identities=19% Similarity=0.089 Sum_probs=67.5
Q ss_pred cCCHHHHHHHHH----hhcccccCh---------hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCc
Q 043530 222 AMSREQLRELGD----GGFLTYCGW---------NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGE 288 (343)
Q Consensus 222 ~~~~~~~~~l~~----~~fvtHgG~---------~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 288 (343)
..+.+++.+... +++..-+.+ +-+.|++++|+|+|+.+ ...++..+++.|+|+.+ +
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~------~- 289 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIV------K- 289 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEE------S-
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEe------C-
Confidence 356777766553 333322222 34789999999999865 45677788888999988 3
Q ss_pred CcccHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043530 289 AIMKGEQIAENISEMMGN--ELLRIQEMRIREEARTAIEQGGSLKKRLTELVEM 340 (343)
Q Consensus 289 ~~~t~~~l~~ai~~vl~~--~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~ 340 (343)
+.+++.++|.++..+ .++++|+++.++.++ .|--.++++.+.+.+
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQ 336 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Confidence 368899999886532 357778877777654 455555566555544
No 46
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.02 E-value=0.19 Score=46.24 Aligned_cols=101 Identities=19% Similarity=0.048 Sum_probs=59.7
Q ss_pred CHHHHHHHHH--hhcc----cccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 224 SREQLRELGD--GGFL----TYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 224 ~~~~~~~l~~--~~fv----tHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
+.+++.++.. ++|| .-|--++++||+++|+|+|+-.. ..... +.+.|.|..++ .-+.++++
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e-~~~~~~g~~~~--------~~d~~~la 386 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITNETGILVK--------AGDPGELA 386 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHH-HCCTTTCEEEC--------TTCHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcce-eEEcCceEEeC--------CCCHHHHH
Confidence 3444444433 5555 22445789999999999999653 33333 33346887772 34789999
Q ss_pred HHHHHHhC-CHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043530 298 ENISEMMG-NELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMW 341 (343)
Q Consensus 298 ~ai~~vl~-~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~ 341 (343)
++|.+++. |++.+++..+ ..++.. +.-+.....+++++.+
T Consensus 387 ~~i~~ll~~~~~~~~~~~~---~~~~~~-~~~s~~~~~~~~~~~~ 427 (439)
T 3fro_A 387 NAILKALELSRSDLSKFRE---NCKKRA-MSFSWEKSAERYVKAY 427 (439)
T ss_dssp HHHHHHHHHTTTTTHHHHH---HHHHHH-HTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHH---HHHHHH-hhCcHHHHHHHHHHHH
Confidence 99999998 6554333322 222222 2255555555555443
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=93.35 E-value=0.14 Score=40.34 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=45.5
Q ss_pred HHHHHHHHH--hhccc----ccChhHHHHHHHhCc-eEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHH
Q 043530 225 REQLRELGD--GGFLT----YCGWNSVTKAMWNGV-QVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIA 297 (343)
Q Consensus 225 ~~~~~~l~~--~~fvt----HgG~~s~~eal~~GV-P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~ 297 (343)
.+++.++.. ++||. -|.-++++||+++|+ |+|+-.-.+... ..+.+.+. .+ ..-+.++++
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~~~~--~~--------~~~~~~~l~ 131 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALDERS--LF--------EPNNAKDLS 131 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSSGGG--EE--------CTTCHHHHH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccCCce--EE--------cCCCHHHHH
Confidence 444544443 44443 344568999999995 999933211111 11111122 23 234799999
Q ss_pred HHHHHHhCCHHHHHHHHH
Q 043530 298 ENISEMMGNELLRIQEMR 315 (343)
Q Consensus 298 ~ai~~vl~~~~~r~~a~~ 315 (343)
++|.+++.|++.+++..+
T Consensus 132 ~~i~~l~~~~~~~~~~~~ 149 (166)
T 3qhp_A 132 AKIDWWLENKLERERMQN 149 (166)
T ss_dssp HHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHH
Confidence 999999998765544433
No 48
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.27 E-value=0.28 Score=43.68 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=38.6
Q ss_pred hhHHHHHHHhCceEEeccCCcchhHHHHHHHH--hcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 242 WNSVTKAMWNGVQVLAWPQHGDQKINADVVER--TGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 242 ~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~--~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
-++++||+++|+|+|+... ..+...+.+ -+.|+.+ .. +.++++++|.+++.
T Consensus 255 ~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~~~g~~~--------~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 255 ATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGEVVGYGT--------DF-APDEARRTLAGLPA 307 (342)
T ss_dssp CHHHHHHHHTTCCEEECCT----TTHHHHGGGGEEECCSSS--------CC-CHHHHHHHHHTSCC
T ss_pred cHHHHHHHhcCCCEEEcCC----CChHHHhcccCCCceEEc--------CC-CHHHHHHHHHHHHH
Confidence 4688999999999999765 334445555 3466555 34 89999999999996
No 49
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=92.97 E-value=0.49 Score=44.37 Aligned_cols=68 Identities=13% Similarity=-0.064 Sum_probs=46.9
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh---------cceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT---------GMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~---------G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||. -|.-++++||+++|+|+|+-.. ..+...+.+. +.|..++ .-+.++++++|
T Consensus 368 dv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~--------~~d~~~la~~i 435 (485)
T 2qzs_A 368 DVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFE--------DSNAWSLLRAI 435 (485)
T ss_dssp SEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEEC--------SSSHHHHHHHH
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEEC--------CCCHHHHHHHH
Confidence 55652 3445688999999999999753 3344444433 5777772 34789999999
Q ss_pred HHHh---CCHHHHHHH
Q 043530 301 SEMM---GNELLRIQE 313 (343)
Q Consensus 301 ~~vl---~~~~~r~~a 313 (343)
.+++ .|++.+++.
T Consensus 436 ~~ll~~~~~~~~~~~~ 451 (485)
T 2qzs_A 436 RRAFVLWSRPSLWRFV 451 (485)
T ss_dssp HHHHHHHTSHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 9999 787665543
No 50
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=92.48 E-value=0.53 Score=44.11 Aligned_cols=68 Identities=13% Similarity=0.007 Sum_probs=47.1
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHh---------cceeeeeccCCCCcCcccHHHHHHHH
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERT---------GMGIWVQSWGWGGEAIMKGEQIAENI 300 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~---------G~G~~l~~~~~~~~~~~t~~~l~~ai 300 (343)
++||. -|--++++||+++|+|+|+... ..+...+.+. +.|..++ .-+.++++++|
T Consensus 367 dv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~--------~~d~~~la~~i 434 (485)
T 1rzu_A 367 DAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFS--------PVTLDGLKQAI 434 (485)
T ss_dssp SEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEES--------SCSHHHHHHHH
T ss_pred CEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeC--------CCCHHHHHHHH
Confidence 66652 3445689999999999999654 3344444433 5777772 34689999999
Q ss_pred HHHh---CCHHHHHHH
Q 043530 301 SEMM---GNELLRIQE 313 (343)
Q Consensus 301 ~~vl---~~~~~r~~a 313 (343)
.+++ .|++.+++.
T Consensus 435 ~~ll~~~~~~~~~~~~ 450 (485)
T 1rzu_A 435 RRTVRYYHDPKLWTQM 450 (485)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHhCCHHHHHHH
Confidence 9999 787655443
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=89.18 E-value=1.3 Score=44.80 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=45.2
Q ss_pred hhccc----ccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh----C
Q 043530 234 GGFLT----YCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM----G 305 (343)
Q Consensus 234 ~~fvt----HgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl----~ 305 (343)
++||. -|--.+++||+++|+|+|+-. .......+.+...|+.++ .-+.++++++|.+++ .
T Consensus 666 DvfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg~~Gllv~--------p~D~e~LA~aI~~lL~~Ll~ 733 (816)
T 3s28_A 666 GAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHGKSGFHID--------PYHGDQAADTLADFFTKCKE 733 (816)
T ss_dssp CEEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBTTTBEEEC--------TTSHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccCCcEEEeC--------CCCHHHHHHHHHHHHHHhcc
Confidence 46663 234568899999999999963 334444444556787772 347889999997776 6
Q ss_pred CHHHHHH
Q 043530 306 NELLRIQ 312 (343)
Q Consensus 306 ~~~~r~~ 312 (343)
|++.+++
T Consensus 734 d~~~~~~ 740 (816)
T 3s28_A 734 DPSHWDE 740 (816)
T ss_dssp CTHHHHH
T ss_pred CHHHHHH
Confidence 7655443
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.49 E-value=0.29 Score=45.31 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=48.0
Q ss_pred CCHHHHHHHHH--hhcccc----cChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHH
Q 043530 223 MSREQLRELGD--GGFLTY----CGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQI 296 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvtH----gG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l 296 (343)
.+.+++.++.. ++||.- +=.+.++||+++|+|+|+ -..+ ....+.+-..|+.+ ..-+.+++
T Consensus 303 ~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv--------~~~d~~~l 369 (413)
T 2x0d_A 303 LTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSL--------EQLNPENI 369 (413)
T ss_dssp CCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEE--------SSCSHHHH
T ss_pred CCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEe--------CCCCHHHH
Confidence 35666666654 666632 223567999999999998 3222 11222333467766 23478999
Q ss_pred HHHHHHHhCCHHHHHH
Q 043530 297 AENISEMMGNELLRIQ 312 (343)
Q Consensus 297 ~~ai~~vl~~~~~r~~ 312 (343)
+++|.++++|++.+++
T Consensus 370 a~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 370 AETLVELCMSFNNRDV 385 (413)
T ss_dssp HHHHHHHHHHTC----
T ss_pred HHHHHHHHcCHHHHHH
Confidence 9999999988776665
No 53
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=76.10 E-value=1.9 Score=35.02 Aligned_cols=64 Identities=17% Similarity=0.220 Sum_probs=44.4
Q ss_pred HHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC-C------HHHHHHHHHHHHHHHH----HHhcCCCHHHHH
Q 043530 266 INADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG-N------ELLRIQEMRIREEART----AIEQGGSLKKRL 334 (343)
Q Consensus 266 ~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~-~------~~~r~~a~~l~~~~~~----a~~~gg~~~~~~ 334 (343)
+.+..-++.|||+.+ |+|+|.++|.+++. + ..|+ +...+-..+|+ -|+++..-...+
T Consensus 103 d~~~Fe~~cGVGV~V-----------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~v 170 (187)
T 3tl4_X 103 TKMGMNENSGVGIEI-----------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPII 170 (187)
T ss_dssp CHHHHHHTTTTTCCC-----------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHH
T ss_pred CHHHHHHHCCCCeEe-----------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHH
Confidence 334444456999877 99999999999995 2 2366 77777777764 357777777777
Q ss_pred HHHHHHH
Q 043530 335 TELVEMW 341 (343)
Q Consensus 335 ~~~~~~~ 341 (343)
|+-+-++
T Consensus 171 D~~~l~l 177 (187)
T 3tl4_X 171 DQEVLKL 177 (187)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655443
No 54
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=75.66 E-value=1.5 Score=40.20 Aligned_cols=68 Identities=7% Similarity=-0.082 Sum_probs=46.7
Q ss_pred CCHHHHHHHHH--hhccc----ccChhHHHHHH-------HhCceEEeccCCcchhHHHHHHHHhcceee-eeccCCCCc
Q 043530 223 MSREQLRELGD--GGFLT----YCGWNSVTKAM-------WNGVQVLAWPQHGDQKINADVVERTGMGIW-VQSWGWGGE 288 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvt----HgG~~s~~eal-------~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~-l~~~~~~~~ 288 (343)
.+.+++.++.. ++||. -|--++++||+ ++|+|+|+-.. +.+...|.. ++
T Consensus 273 ~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~------- 335 (406)
T 2hy7_A 273 MKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYT------- 335 (406)
T ss_dssp CCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEEC-------
T ss_pred CCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeC-------
Confidence 35555555544 55553 23346788999 99999999754 334345766 52
Q ss_pred CcccHHHHHHHHHHHhCCHH
Q 043530 289 AIMKGEQIAENISEMMGNEL 308 (343)
Q Consensus 289 ~~~t~~~l~~ai~~vl~~~~ 308 (343)
.-+.++++++|.++++|++
T Consensus 336 -~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 336 -PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp -TTCHHHHHHHHHHHHHCCC
T ss_pred -CCCHHHHHHHHHHHHhCcc
Confidence 3478999999999998765
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=74.57 E-value=9.3 Score=36.46 Aligned_cols=59 Identities=10% Similarity=-0.016 Sum_probs=36.3
Q ss_pred hHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCC--CCcCcccHHHHHHHHHHHhC
Q 043530 243 NSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGW--GGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 243 ~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~--~~~~~~t~~~l~~ai~~vl~ 305 (343)
.+++||+++|+|+|+-.. ......+.+-.-|........ .-....+.++++++|++++.
T Consensus 416 l~~lEAma~G~PvI~s~~----gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 416 LIQLQGMRYGTPCACAST----GGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp SHHHHHHHTTCCEEECSC----THHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCC----CCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 588999999999999643 334444444444544321000 01133467899999998774
No 56
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=73.63 E-value=3.3 Score=31.10 Aligned_cols=76 Identities=9% Similarity=0.049 Sum_probs=44.8
Q ss_pred CCCCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCCC-c--chHhhhcccCCCcCCCCCCEEEECCCCccc--hHHHHH
Q 043530 5 SELKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKSP-E--NHVTSSLSLLPSLSSPPLSAPVTDMTLTAS--VLPISR 79 (343)
Q Consensus 5 ~~~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~-~--~~i~~~~~~l~~l~~~~~D~vi~D~~~~~~--~~~~A~ 79 (343)
.++.+++||+++== +-.-...|.+.|.+.||+|. . +- ..++. .+++.+||+||.|. ..+. +..+++
T Consensus 3 ~m~~r~~rILiVdD----~~~~~~~l~~~L~~~G~~v~~~a~~g-~eAl~---~~~~~~~DlvllDi-~mP~~~G~el~~ 73 (123)
T 2lpm_A 3 HMTERRLRVLVVED----ESMIAMLIEDTLCELGHEVAATASRM-QEALD---IARKGQFDIAIIDV-NLDGEPSYPVAD 73 (123)
T ss_dssp CCCCCCCCEEEESS----STTTSHHHHHHHHHHCCCCCBCSCCH-HHHHH---HHHHCCSSEEEECS-SSSSCCSHHHHH
T ss_pred CCCCCCCEEEEEeC----CHHHHHHHHHHHHHCCCEEEEEECCH-HHHHH---HHHhCCCCEEEEec-CCCCCCHHHHHH
Confidence 35556888888743 22234456778888999973 1 11 11111 04456899999998 4432 344554
Q ss_pred ---HcCCCcEEEe
Q 043530 80 ---AINVPNYIFF 89 (343)
Q Consensus 80 ---~lgiP~v~~~ 89 (343)
..++|.|.++
T Consensus 74 ~lr~~~ipvI~lT 86 (123)
T 2lpm_A 74 ILAERNVPFIFAT 86 (123)
T ss_dssp HHHHTCCSSCCBC
T ss_pred HHHcCCCCEEEEe
Confidence 4578866543
No 57
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=71.36 E-value=30 Score=32.46 Aligned_cols=108 Identities=8% Similarity=0.018 Sum_probs=61.6
Q ss_pred ceeEEeccCCccCCHHHHHHHHH--hhccc---ccChh-HHHHHHHhCc-----eEEeccCCcchhHHHHHHHHhcceee
Q 043530 211 SVVDVSFGSRTAMSREQLRELGD--GGFLT---YCGWN-SVTKAMWNGV-----QVLAWPQHGDQKINADVVERTGMGIW 279 (343)
Q Consensus 211 ~vVyvs~GS~~~~~~~~~~~l~~--~~fvt---HgG~~-s~~eal~~GV-----P~l~~P~~~DQ~~na~~v~~~G~G~~ 279 (343)
+++|+. | ..+.+++.++.. ++|+. .=|+| ..+||+++|+ |+|+--+.+--.. + .-|+.
T Consensus 332 ~v~~~~-g---~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l---~~g~l 400 (482)
T 1uqt_A 332 PLYYLN-Q---HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L---TSALI 400 (482)
T ss_dssp SEEEEC-S---CCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C---TTSEE
T ss_pred eEEEeC-C---CCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h---CCeEE
Confidence 366653 3 345565555544 66653 23554 6789999998 6766543331111 1 13566
Q ss_pred eeccCCCCcCcccHHHHHHHHHHHhCC-HH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 280 VQSWGWGGEAIMKGEQIAENISEMMGN-EL-LRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 280 l~~~~~~~~~~~t~~~l~~ai~~vl~~-~~-~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
++ .-+.++++++|.++|.+ ++ .+++.++..+.++ + -+...-.+++++.+.
T Consensus 401 v~--------p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~ 452 (482)
T 1uqt_A 401 VN--------PYDRDEVAAALDRALTMSLAERISRHAEMLDVIV----K-NDINHWQECFISDLK 452 (482)
T ss_dssp EC--------TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHH
T ss_pred EC--------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHH
Confidence 62 34689999999999984 33 3344444444332 2 355666677766553
No 58
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=69.61 E-value=3.2 Score=37.74 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=26.9
Q ss_pred CCceEEEEcCC-----CccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSS-----GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p-----~~GH~~p~l~La~~L~~rGh~V 41 (343)
++|||++++.. ..|--.-+..|++.|+++||+|
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V 38 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEV 38 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeE
Confidence 47899999843 3455667899999999999999
No 59
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=69.57 E-value=2.8 Score=38.33 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=27.7
Q ss_pred CCCCceEEEEcC---C--------CccChHHHHHHHHHHHHCCCCC
Q 043530 7 LKPSRLFALLSS---S--------GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 7 ~~~~~~il~~~~---p--------~~GH~~p~l~La~~L~~rGh~V 41 (343)
..+.+||++++. | ..|+-.....|++.|.++||+|
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V 62 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEV 62 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 345789999995 2 3588889999999999999999
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=63.76 E-value=24 Score=34.77 Aligned_cols=21 Identities=10% Similarity=-0.103 Sum_probs=16.8
Q ss_pred ChhHHHHHHHhCceEEeccCC
Q 043530 241 GWNSVTKAMWNGVQVLAWPQH 261 (343)
Q Consensus 241 G~~s~~eal~~GVP~l~~P~~ 261 (343)
-..+.+||+++|+|+|+--..
T Consensus 531 fGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 531 WGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCHHHHHHHHTTCCEEEETTB
T ss_pred CCHHHHHHHHcCCCEEEeCCC
Confidence 345889999999999996543
No 61
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=61.46 E-value=23 Score=24.07 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=35.8
Q ss_pred HhCceEEeccCCcchhHHHHH-H--HHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 250 WNGVQVLAWPQHGDQKINADV-V--ERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 250 ~~GVP~l~~P~~~DQ~~na~~-v--~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
-+|+|++++--.+.|.+.-.. - ...|+...+ .+...+|++.+.+++.|
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydv-------lkstdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDV-------LKSTDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEE-------EECCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhh-------hccCCHHHHHHHHHHHH
Confidence 479999999888888765443 2 333776665 46778999999998887
No 62
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=61.43 E-value=4.8 Score=35.34 Aligned_cols=77 Identities=10% Similarity=-0.071 Sum_probs=49.2
Q ss_pred CceEEEEcCC----------------CccChHHHHHHHHHHHHCCCCC---Cc---c----hH---h-hhcccCCC-cCC
Q 043530 10 SRLFALLSSS----------------GMGHLTPFLRLAALLTAHHVKS---PE---N----HV---T-SSLSLLPS-LSS 58 (343)
Q Consensus 10 ~~~il~~~~p----------------~~GH~~p~l~La~~L~~rGh~V---~~---~----~i---~-~~~~~l~~-l~~ 58 (343)
++||+++... ..|.-.-...|++.|.++||+| +. . .+ . .....+.. +++
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 82 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRT 82 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCSTTEEECSCCSHHHHHHHHHH
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCcceeccCCcHHHHHHHHHh
Confidence 5789998865 2567778899999999999999 21 0 00 0 00001222 455
Q ss_pred CCCCEEEECCCCccchHHHHHHcCCCcEEEe
Q 043530 59 PPLSAPVTDMTLTASVLPISRAINVPNYIFF 89 (343)
Q Consensus 59 ~~~D~vi~D~~~~~~~~~~A~~lgiP~v~~~ 89 (343)
.+||+|++-. .... ..+++..++| |...
T Consensus 83 ~~~Dvi~~~~-~~~~-~~~~~~~~~p-v~~~ 110 (342)
T 2iuy_A 83 ADVDVVHDHS-GGVI-GPAGLPPGTA-FISS 110 (342)
T ss_dssp CCCSEEEECS-SSSS-CSTTCCTTCE-EEEE
T ss_pred cCCCEEEECC-chhh-HHHHhhcCCC-EEEe
Confidence 6999999876 3322 2237788999 6543
No 63
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=60.41 E-value=4.6 Score=37.79 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=27.4
Q ss_pred CCceEEEEcCC---------------CccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSS---------------GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p---------------~~GH~~p~l~La~~L~~rGh~V 41 (343)
++|||++++.. ..|.-.....|++.|+++||+|
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V 53 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQV 53 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEE
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeE
Confidence 36899999852 3577788999999999999999
No 64
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=58.16 E-value=7.3 Score=35.26 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=28.1
Q ss_pred CCceEEEEcCC--CccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSS--GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p--~~GH~~p~l~La~~L~~rGh~V 41 (343)
+++||+++... ..|+-..+..|++.|.++||+|
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v 73 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEA 73 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEE
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 56899988765 3588889999999999999998
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=56.24 E-value=7.6 Score=37.10 Aligned_cols=35 Identities=9% Similarity=-0.043 Sum_probs=24.7
Q ss_pred CCCCceEEEEcCCC------ccChHHHHHHHHHHHHCCCCC
Q 043530 7 LKPSRLFALLSSSG------MGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 7 ~~~~~~il~~~~p~------~GH~~p~l~La~~L~~rGh~V 41 (343)
...+|||+++++-. .|=-.-.-.|+++|+++||+|
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V 46 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRV 46 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeE
Confidence 34689999997531 122234668999999999999
No 66
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=54.68 E-value=9.6 Score=32.79 Aligned_cols=50 Identities=10% Similarity=0.062 Sum_probs=37.0
Q ss_pred hhcccccChhHHHHHHHh------CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 GGFLTYCGWNSVTKAMWN------GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~------GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
+++|+=||=||+++++.. ++|++++|. |. + +-...+.++++.++++.++.
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~----------------G~-l-----gfl~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT----------------GH-L-----GFYADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES----------------SS-C-----CSSCCBCGGGHHHHHHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC----------------CC-C-----CcCCcCCHHHHHHHHHHHHc
Confidence 789999999999999875 899999985 21 2 01223457778888888775
No 67
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=54.46 E-value=7.2 Score=34.48 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=25.2
Q ss_pred ceEEEEcC---CCccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSS---SGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~---p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|||+++.. |..|.-.-+..|++.|+++||+|
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V 34 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHV 34 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeE
Confidence 47887753 45677888999999999999999
No 68
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=53.85 E-value=49 Score=24.63 Aligned_cols=63 Identities=13% Similarity=0.170 Sum_probs=41.0
Q ss_pred hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEAR 321 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~ 321 (343)
..+|++++--..| ........+.|+--.+ .+.++.+++..+|+.++....++...+++++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l-------~kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFI-------AKPFAADRLVQSARRAEEKRRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEE-------ESSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEE-------eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789888854444 4445555666765445 3578999999999999975555444444444443
No 69
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=50.31 E-value=15 Score=27.92 Aligned_cols=32 Identities=13% Similarity=-0.056 Sum_probs=29.8
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
+.+|++.+.++-+|-....-++..|..+|++|
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~V 34 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNV 34 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEE
Confidence 56899999999999999999999999999997
No 70
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=50.29 E-value=13 Score=29.11 Aligned_cols=33 Identities=12% Similarity=-0.092 Sum_probs=31.0
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++.+|++.+.++-.|-....-++..|..+|++|
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eV 49 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEV 49 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEE
Confidence 477999999999999999999999999999998
No 71
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=48.46 E-value=10 Score=33.93 Aligned_cols=84 Identities=11% Similarity=0.037 Sum_probs=51.4
Q ss_pred CCCceEEEEcCC---C-ccChHHHHHHHHHHHHCCCCC---Cc----c----h------H---h--h----------hcc
Q 043530 8 KPSRLFALLSSS---G-MGHLTPFLRLAALLTAHHVKS---PE----N----H------V---T--S----------SLS 51 (343)
Q Consensus 8 ~~~~~il~~~~p---~-~GH~~p~l~La~~L~~rGh~V---~~----~----~------i---~--~----------~~~ 51 (343)
.++|||+++... . .|.-.-...|++.|.++||+| +. . . + . . ...
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHR 97 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------CCHHHHH
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccccHHHHH
Confidence 357899999842 2 566788999999999999999 11 1 0 0 0 0 001
Q ss_pred cCCC-cCCCCCCEEEECCCCccc-hHHHHHHcCCCcEEEecc
Q 043530 52 LLPS-LSSPPLSAPVTDMTLTAS-VLPISRAINVPNYIFFTS 91 (343)
Q Consensus 52 ~l~~-l~~~~~D~vi~D~~~~~~-~~~~A~~lgiP~v~~~~~ 91 (343)
.+.. +++.+||+|++....... +..+++..++|+|.....
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 139 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHT 139 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcC
Confidence 1111 344589999886523322 455677789998876544
No 72
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=47.89 E-value=6.8 Score=35.94 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=26.3
Q ss_pred CCCceEEEEcCCCc-----cChHHHHHHHHHHHHCCCCC
Q 043530 8 KPSRLFALLSSSGM-----GHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 8 ~~~~~il~~~~p~~-----GH~~p~l~La~~L~~rGh~V 41 (343)
.+++||+++..... |=.+....|+++|+++||+|
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV 82 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKK 82 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEE
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCce
Confidence 35789999885522 22346889999999999999
No 73
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=47.38 E-value=15 Score=31.80 Aligned_cols=26 Identities=12% Similarity=0.035 Sum_probs=23.5
Q ss_pred hhcccccChhHHHHHHHh----CceEEecc
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWP 259 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P 259 (343)
+++|+-||=||+++++.. ++|+++++
T Consensus 65 D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 65 DLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp SEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 899999999999999854 78999997
No 74
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=46.26 E-value=20 Score=30.05 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=31.8
Q ss_pred CCCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 7 LKPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 7 ~~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
...+++|++..-|+.|-..-++.+|..|+++|++|
T Consensus 3 ~~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V 37 (228)
T 2r8r_A 3 ARGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRV 37 (228)
T ss_dssp CCCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCE
Confidence 34578899999999999999999999999999998
No 75
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=45.96 E-value=19 Score=29.46 Aligned_cols=33 Identities=15% Similarity=-0.040 Sum_probs=30.9
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++.+|++.+.++-.|-....-++..|..+|++|
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v 119 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTV 119 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEE
Confidence 466899999999999999999999999999997
No 76
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=43.16 E-value=10 Score=34.41 Aligned_cols=76 Identities=11% Similarity=0.060 Sum_probs=45.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCC----Cc---c----hH-h------------------------hhcccC
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKS----PE---N----HV-T------------------------SSLSLL 53 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V----~~---~----~i-~------------------------~~~~~l 53 (343)
.++++++ ++++--+.-+-+|.++|.++ ++. |. + .+ . ..+..+
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~l 86 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLVIEKV 86 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHHHHHH
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHHHHHH
Confidence 4455554 45678888888888888876 664 32 1 11 0 111112
Q ss_pred CC-cCCCCCCEEEE--CCCCccchHHHHHHcCCCcEEE
Q 043530 54 PS-LSSPPLSAPVT--DMTLTASVLPISRAINVPNYIF 88 (343)
Q Consensus 54 ~~-l~~~~~D~vi~--D~~~~~~~~~~A~~lgiP~v~~ 88 (343)
.. +++.+||+|+. |. ...++..+|.++|||.+.+
T Consensus 87 ~~~l~~~kPD~Vlv~gd~-~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 87 DEVLEKEKPDAVLFYGDT-NSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHCCSEEEEESCS-GGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHhcCCcEEEEECCc-hHHHHHHHHHHhCCCEEEE
Confidence 22 44559998876 44 3445578899999996543
No 77
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=42.91 E-value=53 Score=20.02 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=27.9
Q ss_pred ccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 043530 291 MKGEQIAENISEMMGNELLRIQEMRIREEART 322 (343)
Q Consensus 291 ~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~ 322 (343)
.|.++|.+-.++--+||.++.+-++++..+..
T Consensus 1 MskqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 1 MDKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999888754
No 78
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=42.63 E-value=88 Score=22.14 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=45.3
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCCCc-chHhhhcccCCCcCCC-CCCEEEECCCCc--cchHHHHHHc--
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKSPE-NHVTSSLSLLPSLSSP-PLSAPVTDMTLT--ASVLPISRAI-- 81 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~~-~~i~~~~~~l~~l~~~-~~D~vi~D~~~~--~~~~~~A~~l-- 81 (343)
.++.+|+++- .+-.-...|.+.|.+.|++|.. .....+ ++.+++. +||+||.|..+. ..+..+.+.+
T Consensus 3 m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~~~a---~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~ 75 (132)
T 2rdm_A 3 LEAVTILLAD----DEAILLLDFESTLTDAGFLVTAVSSGAKA---IEMLKSGAAIDGVVTDIRFCQPPDGWQVARVARE 75 (132)
T ss_dssp CSSCEEEEEC----SSHHHHHHHHHHHHHTTCEEEEESSHHHH---HHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHH
T ss_pred CCCceEEEEc----CcHHHHHHHHHHHHHcCCEEEEECCHHHH---HHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHh
Confidence 4467888873 3455566778888889998721 000000 0014455 799999998433 1344444332
Q ss_pred ---CCCcEEEeccc
Q 043530 82 ---NVPNYIFFTSS 92 (343)
Q Consensus 82 ---giP~v~~~~~~ 92 (343)
++|.+.++...
T Consensus 76 ~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 76 IDPNMPIVYISGHA 89 (132)
T ss_dssp HCTTCCEEEEESSC
T ss_pred cCCCCCEEEEeCCc
Confidence 58888776554
No 79
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=41.92 E-value=1.2e+02 Score=28.49 Aligned_cols=101 Identities=17% Similarity=0.036 Sum_probs=59.6
Q ss_pred CCHHHHHHHHH--hhccc---ccChhH-HHHHHHhC---ceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccH
Q 043530 223 MSREQLRELGD--GGFLT---YCGWNS-VTKAMWNG---VQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKG 293 (343)
Q Consensus 223 ~~~~~~~~l~~--~~fvt---HgG~~s-~~eal~~G---VP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~ 293 (343)
.+.+++.++-. ++|+. .=|+|- .+||+++| .|+|.--+.+- +..+. .-|+.++ .-..
T Consensus 360 v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l~--~~allVn--------P~D~ 425 (496)
T 3t5t_A 360 NDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVLG--EYCRSVN--------PFDL 425 (496)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHHG--GGSEEEC--------TTBH
T ss_pred CCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHhC--CCEEEEC--------CCCH
Confidence 35555555433 44442 357775 47999996 56555433321 11121 1367773 3478
Q ss_pred HHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 294 EQIAENISEMMGNE--LLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 294 ~~l~~ai~~vl~~~--~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
++++++|.++|.++ +-+++.+++.+.++ .-+...-.+.|++.|.
T Consensus 426 ~~lA~AI~~aL~m~~~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 426 VEQAEAISAALAAGPRQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 99999999999753 44555555544442 3556677777777764
No 80
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=41.75 E-value=15 Score=31.23 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=37.8
Q ss_pred hhcccccChhHHHHHHHh---CceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCC
Q 043530 234 GGFLTYCGWNSVTKAMWN---GVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGN 306 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~---GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~ 306 (343)
+++|+=||=||+++++.. ++|+++++. +- .|. ...+.++++.++++.++.+
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gf---------l~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGF---------LTSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCS---------SCCBCGGGHHHHHHHHHTT
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCc---------cCcCCHHHHHHHHHHHHcC
Confidence 678888999999999887 899999873 21 121 2235688899999888853
No 81
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=41.75 E-value=95 Score=22.38 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=34.1
Q ss_pred hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHH
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIR 317 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~ 317 (343)
..+|++++--..|.......+...|+--.+ .+.++.+++..+|++++.....+...+++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l-------~KP~~~~~L~~~i~~~~~~~~~~~~~~~~~ 130 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFL-------TKPWHPEQLLSSARNAARMFTLARENERLS 130 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEE-------ESSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhc-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888775544433333333333553233 246899999999999985433333333333
No 82
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=41.27 E-value=83 Score=27.48 Aligned_cols=77 Identities=9% Similarity=0.082 Sum_probs=45.9
Q ss_pred chhhhcCCCCceeEEeccCCc--------cCCHHHHHHHHHhh-----cccccChhHHHHHHHhCceEEeccCCcchhHH
Q 043530 201 LAWLDDQATGSVVDVSFGSRT--------AMSREQLRELGDGG-----FLTYCGWNSVTKAMWNGVQVLAWPQHGDQKIN 267 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~--------~~~~~~~~~l~~~~-----fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~n 267 (343)
.+|.+..- ..+=+++||.- .++.+.++++...+ +|-|||.|+-.| .
T Consensus 178 ~~Fv~Tgv--D~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e-------------------~ 236 (306)
T 3pm6_A 178 EEFVATGI--NWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKE-------------------I 236 (306)
T ss_dssp HHHHTTTC--SEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHH-------------------H
T ss_pred HHHHHcCC--CEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHH-------------------H
Confidence 66774332 26778999862 35677777776643 677888763322 3
Q ss_pred HHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 268 ADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 268 a~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
-++..+.|+...- ..+--.....+++++.+.
T Consensus 237 i~~ai~~GV~KiN-------i~Tdl~~a~~~~~r~~~~ 267 (306)
T 3pm6_A 237 FEKCIERGVAKVN-------VNRAVNNEYVKVMREKAG 267 (306)
T ss_dssp HHHHHHTTEEEEE-------ESHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCeEEE-------eChHHHHHHHHHHHHHhc
Confidence 4455566766332 344445566777777764
No 83
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=41.10 E-value=24 Score=29.95 Aligned_cols=34 Identities=21% Similarity=0.033 Sum_probs=31.6
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.++.+|++.+.++-.|-....-++..|..+|++|
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~V 154 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNV 154 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEE
Confidence 4577999999999999999999999999999998
No 84
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=37.88 E-value=36 Score=22.58 Aligned_cols=31 Identities=19% Similarity=0.138 Sum_probs=24.6
Q ss_pred CCcCcccHHHHHHHHHHHhCC-HHHHHHHHHH
Q 043530 286 GGEAIMKGEQIAENISEMMGN-ELLRIQEMRI 316 (343)
Q Consensus 286 ~~~~~~t~~~l~~ai~~vl~~-~~~r~~a~~l 316 (343)
+.....|+++|.+||+.|.++ -+.+..|+..
T Consensus 9 ~ryr~Yte~~L~~Ai~aVr~g~mS~~~Aak~y 40 (70)
T 2cob_A 9 GRYRQYNSEILEEAISVVMSGKMSVSKAQSIY 40 (70)
T ss_dssp SCSCCCCHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHcCCccHHHHHHHh
Confidence 456789999999999999987 4777666653
No 85
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=36.40 E-value=34 Score=28.13 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=24.8
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+|| .|+---.-+..-|.++|||.|.++-+.
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 588755 587444457778999999999987653
No 86
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=36.35 E-value=31 Score=28.41 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=30.6
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
.++.+|++.+.++-.|-....-++..|..+|++|
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~V 123 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQI 123 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEE
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeE
Confidence 4578999999999999999999999999999997
No 87
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=36.19 E-value=78 Score=19.79 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=30.2
Q ss_pred CcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 043530 289 AIMKGEQIAENISEMMGNELLRIQEMRIREEART 322 (343)
Q Consensus 289 ~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~ 322 (343)
-..|.++|.+-.++--+||.++.+-++++..+..
T Consensus 5 lkMskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 5 ASMSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred cCCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999888754
No 88
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=35.24 E-value=20 Score=33.12 Aligned_cols=31 Identities=26% Similarity=0.126 Sum_probs=24.4
Q ss_pred ceEEEEcCC------CccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSS------GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p------~~GH~~p~l~La~~L~~rGh~V 41 (343)
|||++++.. ..|=-.-...|++.|+++||+|
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V 37 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRT 37 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeE
Confidence 578888752 2344567889999999999999
No 89
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=34.71 E-value=78 Score=19.27 Aligned_cols=51 Identities=12% Similarity=0.167 Sum_probs=32.4
Q ss_pred CcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 287 GEAIMKGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 287 ~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+.+.++.+++...++.+- ..-....+...++.. ...++-..+.++|+..++
T Consensus 13 ~~G~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~-D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 13 GDGAVSYEEVKAFVSKKR----AIKNEQLLQLIFKSI-DADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CSSSCCHHHHHHHHHHHH----HHHHHHHHHHHHHHH-CTTCSSSCCHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHcc----CCCcHHHHHHHHHHH-CCCCCCCCCHHHHHHHHH
Confidence 467899999999998763 222334555555543 444444667777776654
No 90
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=34.22 E-value=22 Score=32.72 Aligned_cols=31 Identities=19% Similarity=0.011 Sum_probs=23.9
Q ss_pred ceEEEEcCC------CccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSS------GMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p------~~GH~~p~l~La~~L~~rGh~V 41 (343)
|||++++.. ..|=-.-...|++.|+++||+|
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V 37 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDA 37 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEE
Confidence 588888752 2344566789999999999999
No 91
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=34.19 E-value=37 Score=28.77 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=25.1
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+|| .|+..-.-+..-|.++|||.|.++-+.
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 688755 587444457778999999999987664
No 92
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=33.83 E-value=27 Score=29.26 Aligned_cols=33 Identities=9% Similarity=0.136 Sum_probs=24.4
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
-||+|| .|+.--.-+..-|.++|||.|.++-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 488755 587444457778999999999887553
No 93
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=32.60 E-value=31 Score=29.38 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=24.9
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
-||+|| .|+.--.-+..-|.++|||.|.++-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 588755 587444457888999999999887654
No 94
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=32.13 E-value=38 Score=28.75 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=24.0
Q ss_pred cCCCCCCEEEE----------CCCCccchHH---HHHHcCCCcEEEecc
Q 043530 56 LSSPPLSAPVT----------DMTLTASVLP---ISRAINVPNYIFFTS 91 (343)
Q Consensus 56 l~~~~~D~vi~----------D~~~~~~~~~---~A~~lgiP~v~~~~~ 91 (343)
+.+.+||+||+ |. ++..+.. -|..+|||.|.++-.
T Consensus 81 l~~~~PDLVvSGIN~G~N~g~dv-~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 81 LEEKKPDLVLSGINEGPNLGEDI-TYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp TTTCCCSEEEEEEESSCCCGGGG-GGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCCCEEEeCccCCCccccce-ecchHHHHHHHHHhcCCCeEEEEcc
Confidence 55668999998 44 3434433 446699999998743
No 95
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=31.95 E-value=10 Score=34.49 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=46.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHC-CCCC----Cc---ch----Hh------------------------hhcccC
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAH-HVKS----PE---NH----VT------------------------SSLSLL 53 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~r-Gh~V----~~---~~----i~------------------------~~~~~l 53 (343)
.+||+++.. ......-+..|.++|.++ |+++ |. +. +. ..+..+
T Consensus 25 m~ki~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l 103 (396)
T 3dzc_A 25 MKKVLIVFG-TRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGM 103 (396)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEe-ccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHH
Confidence 457777764 566777888899999987 5554 32 10 00 001111
Q ss_pred CC-cCCCCCCEEEE--CCCCc-cchHHHHHHcCCCcEEE
Q 043530 54 PS-LSSPPLSAPVT--DMTLT-ASVLPISRAINVPNYIF 88 (343)
Q Consensus 54 ~~-l~~~~~D~vi~--D~~~~-~~~~~~A~~lgiP~v~~ 88 (343)
.. +++++||+|++ |. .. ..+..+|.++|||.+.+
T Consensus 104 ~~~l~~~kPDvVi~~g~~-~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 104 QQVLSSEQPDVVLVHGDT-ATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHCCSEEEEETTS-HHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHhcCCCEEEEECCc-hhHHHHHHHHHHhCCCEEEE
Confidence 12 34459999887 33 33 23467889999997643
No 96
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=31.46 E-value=1.8e+02 Score=25.82 Aligned_cols=79 Identities=13% Similarity=0.073 Sum_probs=45.6
Q ss_pred chhhhcCCC----CceeEEeccCCc--------cCCHHHHHHHHHh--------------hcccccChhHHHHHHHhCce
Q 043530 201 LAWLDDQAT----GSVVDVSFGSRT--------AMSREQLRELGDG--------------GFLTYCGWNSVTKAMWNGVQ 254 (343)
Q Consensus 201 ~~wl~~~~~----~~vVyvs~GS~~--------~~~~~~~~~l~~~--------------~fvtHgG~~s~~eal~~GVP 254 (343)
.+|.+.... --.+=+++||.- .++.+.++++... -+|-|||.|+--
T Consensus 188 ~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~-------- 259 (349)
T 3elf_A 188 EKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLK-------- 259 (349)
T ss_dssp HHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCH--------
T ss_pred HHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCH--------
Confidence 667765431 236668999862 2456667776542 278888874322
Q ss_pred EEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 255 VLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 255 ~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
..-++..+.|+... +..+-......+++++.+.
T Consensus 260 -----------e~i~~ai~~GV~Ki-------Ni~Tdl~~A~~~~vr~~~~ 292 (349)
T 3elf_A 260 -----------SEIEEALRYGVVKM-------NVDTDTQYAFTRPIAGHMF 292 (349)
T ss_dssp -----------HHHHHHHHTTEEEE-------EECHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHcCCEEE-------EcchHHHHHHHHHHHHHHH
Confidence 23344556676633 2344455566677777663
No 97
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.40 E-value=25 Score=26.38 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=37.8
Q ss_pred hCceEEeccCCcchhHHHHHHHHhc-ceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTG-MGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLRIQEMRIREEAR 321 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~ 321 (343)
..+|++++--..+ ........+.| +--.+ .+.++.++|.++|++++....+++..+++.+..+
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l-------~kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFL-------LKPWEDEDVFKVVEKGLQLAFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEE-------ESSCCHHHHHHHHHHHHHHHHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheee-------eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888754444 33444455555 53334 3468999999999999965555554444444433
No 98
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=31.13 E-value=26 Score=26.83 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=47.3
Q ss_pred EEEcCCCccChHHHHHHHHHHHHCCCCC--Cc---chH-------------hhh-c----ccCCC-cCCCCCCEEEECCC
Q 043530 14 ALLSSSGMGHLTPFLRLAALLTAHHVKS--PE---NHV-------------TSS-L----SLLPS-LSSPPLSAPVTDMT 69 (343)
Q Consensus 14 l~~~~p~~GH~~p~l~La~~L~~rGh~V--~~---~~i-------------~~~-~----~~l~~-l~~~~~D~vi~D~~ 69 (343)
+|++... .+=.-++.+++.|.+.|+++ |. .++ ..- . +.+.+ +++-+.|+||.-.
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~AT~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~- 104 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLP- 104 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEEEEHHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECC-
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEEECchHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECC-
Confidence 5666543 45667899999999999998 32 222 111 1 34444 6777999999855
Q ss_pred Cc--------cchHHHHHHcCCCcEE
Q 043530 70 LT--------ASVLPISRAINVPNYI 87 (343)
Q Consensus 70 ~~--------~~~~~~A~~lgiP~v~ 87 (343)
-. +.....|-.+|||+++
T Consensus 105 ~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 105 NNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp CCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred CCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 22 1244568889999863
No 99
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=30.64 E-value=1.3e+02 Score=23.80 Aligned_cols=59 Identities=7% Similarity=-0.077 Sum_probs=34.1
Q ss_pred hhcccccChhHHH---HHHHhCceEEeccCCcchhHHHHHHHHh-cceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 234 GGFLTYCGWNSVT---KAMWNGVQVLAWPQHGDQKINADVVERT-GMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 234 ~~fvtHgG~~s~~---eal~~GVP~l~~P~~~DQ~~na~~v~~~-G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
..++--||.||+. |++.+++|++.+|.+. .....+... --.+.+ .-+++++.+.+++.+
T Consensus 110 a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~---------~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 110 VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHV---------AADVAGAIAAVKQLL 172 (176)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEE---------ESSHHHHHHHHHHHH
T ss_pred EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEE---------cCCHHHHHHHHHHHH
Confidence 3444456777654 5678999999999832 111122222 112222 346788888877655
No 100
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=30.01 E-value=50 Score=28.77 Aligned_cols=75 Identities=13% Similarity=0.102 Sum_probs=49.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHC--CCCC----Cc---ch------Hhhhc--------------ccCCC-cCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAH--HVKS----PE---NH------VTSSL--------------SLLPS-LSSPP 60 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~r--Gh~V----~~---~~------i~~~~--------------~~l~~-l~~~~ 60 (343)
+||+++...+.|++.-...+.+.|+++ +.++ .+ .. +.+.. ..+.. +++.+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~~~~~~~~~~~~l~~~l~~~~ 80 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKR 80 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------CHHHHHHHHHHTTTTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCCccccchHHHHHHHHHHHhcC
Confidence 489999988889999999999999987 7776 11 10 10000 01111 56668
Q ss_pred CCEEEECCCCccchHHHHHHcCCCcE
Q 043530 61 LSAPVTDMTLTASVLPISRAINVPNY 86 (343)
Q Consensus 61 ~D~vi~D~~~~~~~~~~A~~lgiP~v 86 (343)
+|++| |..-..-...++...|+|..
T Consensus 81 ~D~vi-d~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 81 YDRAY-VLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp CSEEE-ECSCCSGGGHHHHHTTCSEE
T ss_pred CCEEE-ECCCChHHHHHHHHhCCCEE
Confidence 99988 54233345677888899973
No 101
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.18 E-value=77 Score=23.05 Aligned_cols=60 Identities=12% Similarity=0.121 Sum_probs=37.7
Q ss_pred hhcccccChhH---------HHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 234 GGFLTYCGWNS---------VTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 234 ~~fvtHgG~~s---------~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
+++|-.+|..| +..|...|+|++++=.++.+.. -..+.+.+.- +- .-+.+.|.++|+..+
T Consensus 40 ~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~~a~~--iV--------~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 40 DAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEAVSSE--VV--------GWNPHCIRDALEDAL 108 (111)
T ss_dssp SEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHHHCSE--EE--------CSCHHHHHHHHHHHH
T ss_pred CEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHhhCce--ec--------cCCHHHHHHHHHhcc
Confidence 56666666665 4567889999999877775411 1112322322 21 346899999998876
No 102
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.72 E-value=52 Score=23.63 Aligned_cols=78 Identities=13% Similarity=0.086 Sum_probs=47.6
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHCCCCCCcchHhhhcccCCCcC--CCCCCEEEECCCCccchHH-H---HHHc
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAHHVKSPENHVTSSLSLLPSLS--SPPLSAPVTDMTLTASVLP-I---SRAI 81 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V~~~~i~~~~~~l~~l~--~~~~D~vi~D~~~~~~~~~-~---A~~l 81 (343)
++.++|+++|..+.|+-.-.-.|-+.+.++|.++.-.+ -.+.++. -..+|+||+-. ....... + +...
T Consensus 2 ~~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~-----~~~~~~~~~~~~~D~Ii~t~-~l~~~~~~~~~~~~~~ 75 (109)
T 2l2q_A 2 PGSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA-----IAETRLSEVVDRFDVVLLAP-QSRFNKKRLEEITKPK 75 (109)
T ss_dssp CCCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE-----ECSTTHHHHTTTCSEEEECS-CCSSHHHHHHHHHHHH
T ss_pred CCceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE-----ecHHHHHhhcCCCCEEEECC-ccHHHHHHHHHHhccc
Confidence 34588999999999998666677788888998751000 0001111 12589999987 4323222 2 2346
Q ss_pred CCCcEEEecc
Q 043530 82 NVPNYIFFTS 91 (343)
Q Consensus 82 giP~v~~~~~ 91 (343)
++|++.+.+.
T Consensus 76 ~~pv~~I~~~ 85 (109)
T 2l2q_A 76 GIPIEIINTI 85 (109)
T ss_dssp TCCEEECCHH
T ss_pred CCCEEEEChH
Confidence 9998776543
No 103
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=28.52 E-value=2.2e+02 Score=22.61 Aligned_cols=97 Identities=8% Similarity=0.042 Sum_probs=55.1
Q ss_pred CHHHHHHHHH-------hhcccccChh----HHHHHHHhCceEEeccCCcch---hHHHHHHHHh--cceeeeeccCCCC
Q 043530 224 SREQLRELGD-------GGFLTYCGWN----SVTKAMWNGVQVLAWPQHGDQ---KINADVVERT--GMGIWVQSWGWGG 287 (343)
Q Consensus 224 ~~~~~~~l~~-------~~fvtHgG~~----s~~eal~~GVP~l~~P~~~DQ---~~na~~v~~~--G~G~~l~~~~~~~ 287 (343)
.++.+.+++. ++||.=.|.- ++..+ ..-.|++++|..... .+.-.-+++. |+.+..- .
T Consensus 62 tp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTv-----a 135 (181)
T 4b4k_A 62 TPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATV-----A 135 (181)
T ss_dssp SHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEEC-----C
T ss_pred ChHHHHHHHHHHHhcCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEE-----e
Confidence 4555666654 6777776643 44433 356899999986543 3333345665 5443320 1
Q ss_pred cCcccHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhc
Q 043530 288 EAIMKGEQIAENISEMM--GNELLRIQEMRIREEARTAIEQ 326 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl--~~~~~r~~a~~l~~~~~~a~~~ 326 (343)
.+......-+-.-.++| .|++.+++.+..++..++.+.+
T Consensus 136 ig~~ga~NAallA~qILa~~d~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 136 IGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp SSHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 12111122222222444 4899999999999888877654
No 104
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=28.35 E-value=12 Score=34.05 Aligned_cols=80 Identities=8% Similarity=-0.065 Sum_probs=47.2
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHHC--CCCC----Ccch-------Hh------------------------hhc
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTAH--HVKS----PENH-------VT------------------------SSL 50 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~r--Gh~V----~~~~-------i~------------------------~~~ 50 (343)
++++||+++.. ......-+-.|.++|.++ |+++ |..| +. ..+
T Consensus 25 m~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~ 103 (403)
T 3ot5_A 25 MAKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVM 103 (403)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHH
T ss_pred cccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHHHH
Confidence 34578888875 455566778899999987 5664 3211 10 001
Q ss_pred ccCCC-cCCCCCCEEEE--CCCCccchHHHHHHcCCCcEEE
Q 043530 51 SLLPS-LSSPPLSAPVT--DMTLTASVLPISRAINVPNYIF 88 (343)
Q Consensus 51 ~~l~~-l~~~~~D~vi~--D~~~~~~~~~~A~~lgiP~v~~ 88 (343)
..+.. +++.+||+|++ |.....++..+|.++|||.+.+
T Consensus 104 ~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 104 NGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 11112 34559999887 3312323467889999997644
No 105
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.37 E-value=91 Score=21.70 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=33.1
Q ss_pred hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
..+|++++ ..++........+.|+--.+ .+.++.+++.++|++++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~g~~~~l-------~kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKAHADEYV-------AKPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTTCCSEEE-------ESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHHHHhCcchhe-------eCCCCHHHHHHHHHHHHc
Confidence 47899998 44445555566666764445 357899999999999875
No 106
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=27.32 E-value=2.2e+02 Score=22.25 Aligned_cols=87 Identities=11% Similarity=0.066 Sum_probs=47.5
Q ss_pred hhcccccC----hhHHHHHHHhCceEEeccCCcchh---HHHHHHHHh--cceeeeeccCCCCcC---cccHHHHHHHHH
Q 043530 234 GGFLTYCG----WNSVTKAMWNGVQVLAWPQHGDQK---INADVVERT--GMGIWVQSWGWGGEA---IMKGEQIAENIS 301 (343)
Q Consensus 234 ~~fvtHgG----~~s~~eal~~GVP~l~~P~~~DQ~---~na~~v~~~--G~G~~l~~~~~~~~~---~~t~~~l~~ai~ 301 (343)
++||.=.| +.++..++ --+|++.+|...... +--.-+.+. |+++..- ..+ -....-++..|-
T Consensus 62 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV-----~I~~ag~~nAa~lAa~Il 135 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATF-----AIGMAGAKNAALFAASIL 135 (166)
T ss_dssp CEEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEEC-----CSTHHHHHHHHHHHHHHH
T ss_pred cEEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEE-----ecCCccchHHHHHHHHHH
Confidence 44444444 33444443 368999999854322 112224444 6665441 122 222333332221
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHHhcC
Q 043530 302 EMMGNELLRIQEMRIREEARTAIEQG 327 (343)
Q Consensus 302 ~vl~~~~~r~~a~~l~~~~~~a~~~g 327 (343)
. +.|++++++.+..++..++.+.+.
T Consensus 136 ~-~~d~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 136 Q-HTDINIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp G-GGCHHHHHHHHHHHHHHHHHHHTC
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1 249999999999999998876543
No 107
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=26.97 E-value=38 Score=28.51 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=24.6
Q ss_pred CCCEEE-ECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAPV-TDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~vi-~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||+|| .|+.--.-+..-|.++|||.|.++-+.
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDSD 147 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCSS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecCC
Confidence 588755 587444457788999999999887653
No 108
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.33 E-value=1.9e+02 Score=21.05 Aligned_cols=53 Identities=13% Similarity=-0.013 Sum_probs=33.8
Q ss_pred HhCceEEeccCCcchhHHHHHHHHhc-ceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 250 WNGVQVLAWPQHGDQKINADVVERTG-MGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 250 ~~GVP~l~~P~~~DQ~~na~~v~~~G-~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
...+|++++--..|. .......+.| +--.+ .+.++.+++.++|++++....+.
T Consensus 74 ~~~~~ii~~s~~~~~-~~~~~~~~~g~~~~~l-------~KP~~~~~L~~~i~~~l~~~~~~ 127 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDL-TTAMEAVNEGQVFRFL-------NKPCQMSDIKAAINAGIKQYDLV 127 (151)
T ss_dssp CSSCEEEEEECGGGH-HHHHHHHHHTCCSEEE-------ESSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCH-HHHHHHHHcCCeeEEE-------cCCCCHHHHHHHHHHHHHHHHHH
Confidence 357888877544443 3344455556 53334 35789999999999999754443
No 109
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=25.62 E-value=40 Score=29.93 Aligned_cols=33 Identities=9% Similarity=-0.101 Sum_probs=26.9
Q ss_pred CCceEEEEcCCC-ccChHHHHHHHHHHHHCCCCC
Q 043530 9 PSRLFALLSSSG-MGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 9 ~~~~il~~~~p~-~GH~~p~l~La~~L~~rGh~V 41 (343)
-++++....+|. .|.-.-...|++.|+++||+|
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V 47 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEI 47 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEE
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 367888888885 467778889999999999999
No 110
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=25.59 E-value=1.2e+02 Score=21.93 Aligned_cols=17 Identities=18% Similarity=0.345 Sum_probs=14.7
Q ss_pred cCcccHHHHHHHHHHHh
Q 043530 288 EAIMKGEQIAENISEMM 304 (343)
Q Consensus 288 ~~~~t~~~l~~ai~~vl 304 (343)
...+|+++|.+.+++++
T Consensus 100 G~~~~~~ei~~~i~~~~ 116 (118)
T 3ju3_A 100 GRHMTEDEILKSAKEIL 116 (118)
T ss_dssp TBCCCHHHHHHHHHHHH
T ss_pred CeeCCHHHHHHHHHHHh
Confidence 35799999999999886
No 111
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=25.58 E-value=30 Score=31.30 Aligned_cols=35 Identities=9% Similarity=-0.019 Sum_probs=21.8
Q ss_pred CCCCCCceEEEEc---CCCccChHHHHHHHHHHHHCCCCC
Q 043530 5 SELKPSRLFALLS---SSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 5 ~~~~~~~~il~~~---~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
++...+|||++++ +| .+.-.-...+++.|+++| +|
T Consensus 9 ~~~~~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V 46 (406)
T 2hy7_A 9 ASGIRRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TT 46 (406)
T ss_dssp ----CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CE
T ss_pred CCCCCCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ce
Confidence 3445579999998 44 222222356788999999 98
No 112
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=24.74 E-value=23 Score=31.33 Aligned_cols=77 Identities=13% Similarity=0.011 Sum_probs=45.8
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHC-CCCC----Cc---ch----Hhh-------hcc-----------------cCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAH-HVKS----PE---NH----VTS-------SLS-----------------LLP 54 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~r-Gh~V----~~---~~----i~~-------~~~-----------------~l~ 54 (343)
+||+++... .++......|+++|.++ ||+| +. .. +.. ..+ .+.
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 84 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQAA 84 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHHHH
Confidence 689998753 33345567889999998 7885 22 10 100 000 111
Q ss_pred C-cCCCCCCEEEE--CCCCccchHHHHHHcCCCcEEE
Q 043530 55 S-LSSPPLSAPVT--DMTLTASVLPISRAINVPNYIF 88 (343)
Q Consensus 55 ~-l~~~~~D~vi~--D~~~~~~~~~~A~~lgiP~v~~ 88 (343)
. +++.+||+|++ +......+..+|+.+|+|++.+
T Consensus 85 ~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 85 RALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp HHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 1 44568999998 3212223456789999998654
No 113
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=24.60 E-value=1.6e+02 Score=25.31 Aligned_cols=77 Identities=9% Similarity=0.050 Sum_probs=49.8
Q ss_pred chhhhcCCCCceeEEeccCCc-------cCCHHHHHHHHH---hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHH
Q 043530 201 LAWLDDQATGSVVDVSFGSRT-------AMSREQLRELGD---GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADV 270 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~-------~~~~~~~~~l~~---~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~ 270 (343)
.+|.+..+- ..+=+++||.- .++.+.++++.. -=+|-|||.|+ -...-++
T Consensus 161 ~~Fv~~Tgv-D~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~-------------------~~e~i~~ 220 (286)
T 1gvf_A 161 KRFVELTGV-DSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDV-------------------PDEFVRR 220 (286)
T ss_dssp HHHHHHHCC-SEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTC-------------------CHHHHHH
T ss_pred HHHHHHHCC-CEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCC-------------------CHHHHHH
Confidence 677765543 37788999873 467888888876 33777888754 1233455
Q ss_pred HHHhcceeeeeccCCCCcCcccHHHHHHHHHHHh
Q 043530 271 VERTGMGIWVQSWGWGGEAIMKGEQIAENISEMM 304 (343)
Q Consensus 271 v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl 304 (343)
..+.|+... +..+-......+++++.+
T Consensus 221 ai~~Gv~Ki-------Ni~Tdl~~a~~~~~r~~~ 247 (286)
T 1gvf_A 221 TIELGVTKV-------NVATELKIAFAGAVKAWF 247 (286)
T ss_dssp HHHTTEEEE-------EECHHHHHHHHHHHHHHH
T ss_pred HHHCCCeEE-------EEChHHHHHHHHHHHHHH
Confidence 566777643 244555666677777776
No 114
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=23.32 E-value=3e+02 Score=23.78 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=29.1
Q ss_pred chhhhcCCCCceeEEeccCCc---cCCHHHHHHHHH---------hhcccccChhHHHHHH
Q 043530 201 LAWLDDQATGSVVDVSFGSRT---AMSREQLRELGD---------GGFLTYCGWNSVTKAM 249 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~---~~~~~~~~~l~~---------~~fvtHgG~~s~~eal 249 (343)
.+|+-+.+-++ ++.+||.. .++.++-.++.+ .-+|-+.|.+++.|++
T Consensus 34 v~~li~~Gv~G--l~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai 92 (311)
T 3h5d_A 34 IEHLLAHHTDG--ILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSI 92 (311)
T ss_dssp HHHHHHTTCCC--EEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHH
T ss_pred HHHHHHcCCCE--EEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHH
Confidence 55665443333 23356654 678877777665 3466678888888775
No 115
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.01 E-value=48 Score=30.12 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=35.2
Q ss_pred hhcccccChhHHHHHHHh----Cc-eEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GV-QVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GV-P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
+++|+-||=||++.|+.. ++ |++++... -+| -...+..+++.+++++++.
T Consensus 116 DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-------------~lG---------FLt~~~~~~~~~al~~il~ 170 (388)
T 3afo_A 116 DLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-------------TLG---------FLSPFDFKEHKKVFQEVIS 170 (388)
T ss_dssp SEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-------------SCC---------SSCCEEGGGHHHHHHHHHT
T ss_pred CEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-------------Ccc---------cCCcCChHHHHHHHHHHhc
Confidence 899999999999999764 57 79988631 011 1123456777777877775
No 116
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=22.94 E-value=71 Score=26.29 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=35.9
Q ss_pred CCCceEEEEcCCCccChHHHHHHHHHHHH-CCCCCCcchHhhhcccCCCcCCCCCCEEEECCCCccchHHHHHHcCCCcE
Q 043530 8 KPSRLFALLSSSGMGHLTPFLRLAALLTA-HHVKSPENHVTSSLSLLPSLSSPPLSAPVTDMTLTASVLPISRAINVPNY 86 (343)
Q Consensus 8 ~~~~~il~~~~p~~GH~~p~l~La~~L~~-rGh~V~~~~i~~~~~~l~~l~~~~~D~vi~D~~~~~~~~~~A~~lgiP~v 86 (343)
.+++||+++..+..+.+ .+|.....+ .+++ +.+||+|. --..+...|+++|||+.
T Consensus 3 ~~~~riavl~SG~Gsnl---~all~~~~~~~~~e--------------------I~~Vis~~-~~a~~~~~A~~~gIp~~ 58 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNL---QAIIGAIQKGLAIE--------------------IRAVISNR-ADAYGLKRAQQADIPTH 58 (215)
T ss_dssp -CCEEEEEEESSCCHHH---HHHHHHHHTTCSEE--------------------EEEEEESC-TTCHHHHHHHHTTCCEE
T ss_pred CCCcEEEEEEeCCcHHH---HHHHHHHHcCCCCE--------------------EEEEEeCC-cchHHHHHHHHcCCCEE
Confidence 34678888877543333 333333332 1333 56788887 44456778999999987
Q ss_pred EEe
Q 043530 87 IFF 89 (343)
Q Consensus 87 ~~~ 89 (343)
.+.
T Consensus 59 ~~~ 61 (215)
T 3tqr_A 59 IIP 61 (215)
T ss_dssp ECC
T ss_pred EeC
Confidence 654
No 117
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=22.82 E-value=67 Score=26.33 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=26.0
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 10 SRLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 10 ~~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
+.||++--.++-|-+. ...|.+.|.++|++|
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV 34 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREV 34 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEE
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEE
Confidence 4588888887777665 899999999999998
No 118
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=21.98 E-value=67 Score=31.68 Aligned_cols=101 Identities=7% Similarity=-0.044 Sum_probs=66.2
Q ss_pred hhcccccChhHHHHHHHhCceEEeccCCcchhHHHHHHHHhcceeeeeccCC-CCcCcccHHHHHHHHHHHhC-CHHHHH
Q 043530 234 GGFLTYCGWNSVTKAMWNGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGW-GGEAIMKGEQIAENISEMMG-NELLRI 311 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~-~~~~~~t~~~l~~ai~~vl~-~~~~r~ 311 (343)
++.||=- ...+.|.+..++|++-...-.|+..+- ..| ...+.... -+.-.-+.++|.++|++... +..|++
T Consensus 617 D~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~rg--~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~ 689 (729)
T 3l7i_A 617 DCLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LRG--FYMNYMEDLPGPIYTEPYGLAKELKNLDKVQQQYQE 689 (729)
T ss_dssp SEEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CCS--BSSCTTSSSSSCEESSHHHHHHHHTTHHHHHHHTHH
T ss_pred CEEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cCC--cccChhHhCCCCeECCHHHHHHHHhhhhccchhHHH
Confidence 7777763 234569999999999987666654331 123 33321100 01235678999999988875 467888
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 312 QEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 312 ~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
+.++..+.+-.. .+|.++++-++.+++..+
T Consensus 690 ~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 690 KIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 877777776543 678888888888877543
No 119
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.92 E-value=38 Score=29.55 Aligned_cols=27 Identities=19% Similarity=0.030 Sum_probs=23.8
Q ss_pred hhcccccChhHHHHHHHh----CceEEeccC
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAWPQ 260 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~P~ 260 (343)
+++|+-||=||+++++.. ++|+++++.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 889999999999999755 899999873
No 120
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=21.52 E-value=46 Score=27.23 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=26.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|+|+|..-++.|=..-...||..|+++|++|
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~V 31 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKI 31 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCE
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeE
Confidence 4688866678899999999999999999876
No 121
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=21.10 E-value=21 Score=30.91 Aligned_cols=25 Identities=32% Similarity=0.348 Sum_probs=20.3
Q ss_pred ceEEEEcCC----CccChHHHHHHHHHHH
Q 043530 11 RLFALLSSS----GMGHLTPFLRLAALLT 35 (343)
Q Consensus 11 ~~il~~~~p----~~GH~~p~l~La~~L~ 35 (343)
|||+|.+=. +.||+..++.||++|.
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~ 29 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS 29 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH
Confidence 356666544 7799999999999999
No 122
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=21.09 E-value=2.7e+02 Score=24.82 Aligned_cols=48 Identities=19% Similarity=0.050 Sum_probs=30.0
Q ss_pred chhhhcCCCCceeEEeccCCc---cCCHHHHHHHHH---------hhcccccChhHHHHHHH
Q 043530 201 LAWLDDQATGSVVDVSFGSRT---AMSREQLRELGD---------GGFLTYCGWNSVTKAMW 250 (343)
Q Consensus 201 ~~wl~~~~~~~vVyvs~GS~~---~~~~~~~~~l~~---------~~fvtHgG~~s~~eal~ 250 (343)
.+|+-+.+-+++ + .+||.. .++.++-.++++ --+|-+.|.+|+.|++.
T Consensus 86 v~~li~~Gv~Gl-~-v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~ 145 (360)
T 4dpp_A 86 VNIQIQNGAEGV-I-VGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIH 145 (360)
T ss_dssp HHHHHHTTCCEE-E-ESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHH
T ss_pred HHHHHHcCCCEE-E-ecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHH
Confidence 556655443332 2 356654 678877766654 24567888888888765
No 123
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.00 E-value=63 Score=26.38 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=25.0
Q ss_pred CCCEE-EECCCCccchHHHHHHcCCCcEEEeccc
Q 043530 60 PLSAP-VTDMTLTASVLPISRAINVPNYIFFTSS 92 (343)
Q Consensus 60 ~~D~v-i~D~~~~~~~~~~A~~lgiP~v~~~~~~ 92 (343)
.||++ |.|+..-.-+..-|.++|||.|.++-+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 68875 5587445457778999999999887664
No 124
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=21.00 E-value=80 Score=23.20 Aligned_cols=53 Identities=17% Similarity=0.077 Sum_probs=31.5
Q ss_pred CceeEEeccCCccCCHHHHHHHHH------------hhcccccChhHHHHHHHh-Cc-eEEeccCCc
Q 043530 210 GSVVDVSFGSRTAMSREQLRELGD------------GGFLTYCGWNSVTKAMWN-GV-QVLAWPQHG 262 (343)
Q Consensus 210 ~~vVyvs~GS~~~~~~~~~~~l~~------------~~fvtHgG~~s~~eal~~-GV-P~l~~P~~~ 262 (343)
..+|+++.||-..-..+.+..++. -+|+.+-+.-|+-+++.. |+ .++++|++.
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~lg~~~v~v~Plfl 70 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREMNCDIIYVVPLFI 70 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHCCCSEEEEEECCS
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHcCCCEEEEEeeee
Confidence 368999999964322334444443 355554144556655433 65 689999765
No 125
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.67 E-value=1.1e+02 Score=22.01 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=35.0
Q ss_pred hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhCCHHHH
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMGNELLR 310 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~~~~~r 310 (343)
..+|++++--..| ........+.|+--.+ .+.++.+++.++|++++....+.
T Consensus 76 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l-------~kp~~~~~l~~~l~~~~~~~~~~ 127 (143)
T 3jte_A 76 PHMAVIILTGHGD-LDNAILAMKEGAFEYL-------RKPVTAQDLSIAINNAINRKKLL 127 (143)
T ss_dssp TTCEEEEEECTTC-HHHHHHHHHTTCSEEE-------ESSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCC-HHHHHHHHHhCcceeE-------eCCCCHHHHHHHHHHHHHHHHHH
Confidence 4788888754444 3445555666765445 35689999999999998644443
No 126
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=20.47 E-value=42 Score=30.21 Aligned_cols=25 Identities=16% Similarity=-0.004 Sum_probs=21.2
Q ss_pred hhcccccChhHHHHHHHh----CceEEec
Q 043530 234 GGFLTYCGWNSVTKAMWN----GVQVLAW 258 (343)
Q Consensus 234 ~~fvtHgG~~s~~eal~~----GVP~l~~ 258 (343)
+++|+=||=||++.|.+. ++|++++
T Consensus 110 DlvI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 110 DFIICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp SEEEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred CEEEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 788999999999999873 5788876
No 127
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=20.42 E-value=57 Score=27.71 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=19.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHHCCCCC
Q 043530 11 RLFALLSSSGMGHLTPFLRLAALLTAHHVKS 41 (343)
Q Consensus 11 ~~il~~~~p~~GH~~p~l~La~~L~~rGh~V 41 (343)
|||++. ++.|.+- -+|+++|.++||+|
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V 27 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEV 27 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEE
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEE
Confidence 565543 4566664 46899999999999
No 128
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=20.39 E-value=3.2e+02 Score=21.55 Aligned_cols=87 Identities=13% Similarity=0.066 Sum_probs=46.8
Q ss_pred hhcccccC----hhHHHHHHHhCceEEeccCCcchh---HHHHHHHHh--cceeeeeccCCCCcC---cccHHHHHHHHH
Q 043530 234 GGFLTYCG----WNSVTKAMWNGVQVLAWPQHGDQK---INADVVERT--GMGIWVQSWGWGGEA---IMKGEQIAENIS 301 (343)
Q Consensus 234 ~~fvtHgG----~~s~~eal~~GVP~l~~P~~~DQ~---~na~~v~~~--G~G~~l~~~~~~~~~---~~t~~~l~~ai~ 301 (343)
++||.=.| +.++..++ --+|++.+|...... +--.-+.+. |+.+..- ..+ -....-++..|-
T Consensus 69 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV-----~I~~a~~~nAa~lAa~IL 142 (174)
T 3kuu_A 69 HVIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL-----AIGKAGAANAALLAAQIL 142 (174)
T ss_dssp SEEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEEC-----CSSHHHHHHHHHHHHHHH
T ss_pred cEEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEE-----EeCCccchHHHHHHHHHH
Confidence 44554444 33444443 368999999854322 112223443 6543331 122 122333333332
Q ss_pred HHhCCHHHHHHHHHHHHHHHHHHhcC
Q 043530 302 EMMGNELLRIQEMRIREEARTAIEQG 327 (343)
Q Consensus 302 ~vl~~~~~r~~a~~l~~~~~~a~~~g 327 (343)
-+.|++.+++.+..++..++.+.+.
T Consensus 143 -a~~d~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 143 -ALHDTELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2359999999999999998877543
No 129
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=20.35 E-value=2e+02 Score=21.23 Aligned_cols=47 Identities=9% Similarity=0.192 Sum_probs=35.1
Q ss_pred hCceEEeccCCcchhHHHHHHHHhcceeeeeccCCCCcCcccHHHHHHHHHHHhC
Q 043530 251 NGVQVLAWPQHGDQKINADVVERTGMGIWVQSWGWGGEAIMKGEQIAENISEMMG 305 (343)
Q Consensus 251 ~GVP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~~~~t~~~l~~ai~~vl~ 305 (343)
..+|++++--..+ .....+..+.|+--.+ .+.++.+++.++|+++++
T Consensus 86 ~~ipvI~lTa~~~-~~~~~~~~~~Ga~~yl-------~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAK-REQIIEAAQAGVNGYI-------VKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCC-HHHHHHHHHTTCCEEE-------ESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCC-HHHHHHHHHCCCCEEE-------ECCCCHHHHHHHHHHHHh
Confidence 4689998876555 4455666677876566 467899999999999874
No 130
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=20.22 E-value=69 Score=22.23 Aligned_cols=48 Identities=13% Similarity=0.071 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 043530 292 KGEQIAENISEMMGNELLRIQEMRIREEARTAIEQGGSLKKRLTELVEMWK 342 (343)
Q Consensus 292 t~~~l~~ai~~vl~~~~~r~~a~~l~~~~~~a~~~gg~~~~~~~~~~~~~~ 342 (343)
..|.|+++|+.+.. . ..+...|.+.+.+..+.|-+...+.++++..++
T Consensus 30 ~SEviR~~lR~l~~-r--e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~ 77 (88)
T 3kxe_C 30 ASEVIRAGLRLLEE-N--EAKLAALRAALIEGEESGFIEDFDFDAFIEERS 77 (88)
T ss_dssp HHHHHHHHHHHHHH-H--HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-H--hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Confidence 45777777766553 2 234567888888887766654467888887764
Done!