Query 043533
Match_columns 301
No_of_seqs 160 out of 1689
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 09:56:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 5.8E-49 2E-53 362.1 17.6 277 14-301 28-345 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 3.6E-45 1.2E-49 338.1 23.1 283 13-301 39-364 (364)
3 3lst_A CALO1 methyltransferase 100.0 4.3E-44 1.5E-48 328.9 21.6 277 14-301 42-347 (348)
4 3reo_A (ISO)eugenol O-methyltr 100.0 1.7E-43 5.8E-48 327.4 21.4 283 13-301 40-366 (368)
5 3gwz_A MMCR; methyltransferase 100.0 9E-44 3.1E-48 329.3 16.7 276 14-301 58-368 (369)
6 3i53_A O-methyltransferase; CO 100.0 9.6E-44 3.3E-48 324.4 15.6 273 14-301 25-331 (332)
7 2ip2_A Probable phenazine-spec 100.0 3E-42 1E-46 314.6 17.9 273 14-301 28-333 (334)
8 1zg3_A Isoflavanone 4'-O-methy 100.0 8.6E-42 2.9E-46 314.7 19.4 286 14-301 30-358 (358)
9 1fp2_A Isoflavone O-methyltran 100.0 3.3E-41 1.1E-45 310.1 20.5 284 14-301 36-352 (352)
10 1fp1_D Isoliquiritigenin 2'-O- 100.0 3.9E-41 1.3E-45 311.9 16.5 281 15-301 45-372 (372)
11 1qzz_A RDMB, aclacinomycin-10- 100.0 1.3E-39 4.4E-44 301.5 16.9 277 14-301 36-355 (374)
12 1tw3_A COMT, carminomycin 4-O- 100.0 1.5E-39 5.3E-44 299.6 16.4 276 15-301 40-355 (360)
13 3dp7_A SAM-dependent methyltra 100.0 4.2E-39 1.5E-43 297.4 15.1 275 14-301 35-354 (363)
14 2r3s_A Uncharacterized protein 100.0 9E-38 3.1E-42 284.7 15.3 273 14-300 26-333 (335)
15 3mcz_A O-methyltransferase; ad 100.0 3.9E-37 1.3E-41 282.7 17.0 266 15-301 45-348 (352)
16 1x19_A CRTF-related protein; m 100.0 8.5E-37 2.9E-41 281.4 16.6 262 15-301 52-358 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.7E-18 5.8E-23 152.4 12.9 151 147-301 68-256 (261)
18 3dtn_A Putative methyltransfer 99.7 7E-17 2.4E-21 138.9 12.2 149 148-300 43-224 (234)
19 1ve3_A Hypothetical protein PH 99.7 2.2E-17 7.6E-22 141.1 6.3 147 148-301 37-226 (227)
20 3dh0_A SAM dependent methyltra 99.7 4.3E-16 1.5E-20 132.5 12.5 145 135-301 26-192 (219)
21 3dlc_A Putative S-adenosyl-L-m 99.6 8E-17 2.7E-21 136.5 5.5 154 136-298 34-211 (219)
22 3bus_A REBM, methyltransferase 99.6 9.3E-16 3.2E-20 134.9 11.4 144 136-290 51-216 (273)
23 3pfg_A N-methyltransferase; N, 99.6 5.6E-16 1.9E-20 135.8 9.4 150 147-301 48-248 (263)
24 3bxo_A N,N-dimethyltransferase 99.6 7.9E-16 2.7E-20 132.4 10.1 149 148-301 39-238 (239)
25 1vl5_A Unknown conserved prote 99.6 9.2E-16 3.2E-20 134.1 10.0 149 128-290 19-190 (260)
26 3vc1_A Geranyl diphosphate 2-C 99.6 2.1E-15 7.3E-20 135.6 12.1 152 127-290 97-269 (312)
27 3hnr_A Probable methyltransfer 99.6 1.6E-15 5.6E-20 129.0 9.9 156 136-300 35-210 (220)
28 2o57_A Putative sarcosine dime 99.6 2.6E-15 8.9E-20 133.8 11.1 144 135-290 67-234 (297)
29 1nkv_A Hypothetical protein YJ 99.6 2.8E-15 9.5E-20 130.5 11.0 141 136-290 26-187 (256)
30 3ou2_A SAM-dependent methyltra 99.6 7.8E-15 2.7E-19 124.2 13.0 150 135-291 34-206 (218)
31 3f4k_A Putative methyltransfer 99.6 4.6E-15 1.6E-19 129.2 11.3 141 137-291 36-197 (257)
32 3mgg_A Methyltransferase; NYSG 99.6 1.8E-15 6.1E-20 133.4 8.4 141 147-290 35-198 (276)
33 3ujc_A Phosphoethanolamine N-m 99.6 4.1E-15 1.4E-19 129.8 10.4 141 136-290 45-206 (266)
34 3kkz_A Uncharacterized protein 99.6 4E-15 1.4E-19 130.6 9.2 133 147-291 44-197 (267)
35 3ocj_A Putative exported prote 99.6 2.4E-15 8.2E-20 134.9 7.9 152 147-301 116-303 (305)
36 3l8d_A Methyltransferase; stru 99.6 1.4E-14 4.9E-19 124.8 12.3 132 147-290 51-200 (242)
37 3g2m_A PCZA361.24; SAM-depende 99.6 3.6E-15 1.2E-19 133.3 8.6 158 135-301 72-291 (299)
38 1xxl_A YCGJ protein; structura 99.6 5.7E-15 1.9E-19 127.7 9.5 141 136-290 11-174 (239)
39 4fsd_A Arsenic methyltransfera 99.6 9.2E-15 3.2E-19 135.4 11.0 134 147-289 81-250 (383)
40 3gu3_A Methyltransferase; alph 99.6 7.3E-15 2.5E-19 130.4 9.0 141 147-290 20-190 (284)
41 3g5l_A Putative S-adenosylmeth 99.5 1.9E-14 6.5E-19 125.1 9.7 145 138-290 36-216 (253)
42 1kpg_A CFA synthase;, cyclopro 99.5 3E-14 1E-18 126.3 11.1 147 136-290 54-228 (287)
43 3i9f_A Putative type 11 methyl 99.5 6.4E-15 2.2E-19 120.3 6.0 135 138-300 9-158 (170)
44 3h2b_A SAM-dependent methyltra 99.5 2E-14 6.8E-19 120.8 9.2 131 150-298 42-191 (203)
45 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8.4E-15 2.9E-19 127.2 6.5 136 136-291 83-239 (254)
46 3bkw_A MLL3908 protein, S-aden 99.5 1E-13 3.5E-18 119.4 12.4 147 137-290 34-214 (243)
47 4htf_A S-adenosylmethionine-de 99.5 1.4E-14 4.8E-19 128.3 6.7 139 149-292 68-234 (285)
48 2p35_A Trans-aconitate 2-methy 99.5 2.7E-14 9.3E-19 124.3 8.4 144 136-285 23-185 (259)
49 2qe6_A Uncharacterized protein 99.5 6.5E-14 2.2E-18 123.9 10.7 127 149-286 77-238 (274)
50 3hem_A Cyclopropane-fatty-acyl 99.5 5E-14 1.7E-18 126.0 10.0 148 136-291 62-244 (302)
51 3ccf_A Cyclopropane-fatty-acyl 99.5 4.6E-14 1.6E-18 124.7 9.6 147 133-290 44-210 (279)
52 3sm3_A SAM-dependent methyltra 99.5 5.3E-14 1.8E-18 120.4 9.4 136 147-290 28-207 (235)
53 2p7i_A Hypothetical protein; p 99.5 6.4E-14 2.2E-18 120.7 10.0 136 148-290 41-199 (250)
54 3dli_A Methyltransferase; PSI- 99.5 1E-13 3.4E-18 119.7 11.0 128 147-291 39-185 (240)
55 3e8s_A Putative SAM dependent 99.5 2.7E-14 9.1E-19 121.5 7.1 143 136-289 42-208 (227)
56 3ege_A Putative methyltransfer 99.5 1.1E-13 3.8E-18 121.1 11.2 141 135-290 23-178 (261)
57 3d2l_A SAM-dependent methyltra 99.5 1.2E-13 4E-18 119.0 10.7 148 147-301 31-242 (243)
58 3lcc_A Putative methyl chlorid 99.5 3E-14 1E-18 122.6 6.7 119 150-291 67-208 (235)
59 1y8c_A S-adenosylmethionine-de 99.5 7.4E-14 2.5E-18 120.3 8.8 147 149-301 37-244 (246)
60 2fk8_A Methoxy mycolic acid sy 99.5 6.5E-14 2.2E-18 126.1 8.8 147 136-290 80-254 (318)
61 3g07_A 7SK snRNA methylphospha 99.5 1.4E-14 4.7E-19 129.3 4.1 140 141-290 38-269 (292)
62 2ex4_A Adrenal gland protein A 99.5 5.5E-14 1.9E-18 121.5 6.6 125 149-291 79-226 (241)
63 3grz_A L11 mtase, ribosomal pr 99.5 2.3E-13 7.7E-18 114.6 9.9 123 147-301 58-196 (205)
64 3bkx_A SAM-dependent methyltra 99.4 1.5E-13 5.1E-18 120.8 8.5 149 136-291 33-220 (275)
65 3jwg_A HEN1, methyltransferase 99.4 2E-13 6.8E-18 116.0 8.5 135 141-287 23-189 (219)
66 3e23_A Uncharacterized protein 99.4 1.8E-13 6E-18 115.7 8.0 125 147-290 41-182 (211)
67 1vlm_A SAM-dependent methyltra 99.4 4.8E-13 1.7E-17 113.9 10.4 126 150-290 48-188 (219)
68 2zfu_A Nucleomethylin, cerebra 99.4 8.1E-13 2.8E-17 111.9 11.3 123 135-301 55-190 (215)
69 1pjz_A Thiopurine S-methyltran 99.4 1.5E-13 5.1E-18 116.0 6.4 121 147-290 20-176 (203)
70 1fbn_A MJ fibrillarin homologu 99.4 6E-13 2E-17 114.3 9.9 133 147-301 72-227 (230)
71 3cgg_A SAM-dependent methyltra 99.4 1.9E-12 6.5E-17 107.2 12.5 120 136-290 37-175 (195)
72 2qm3_A Predicted methyltransfe 99.4 4.9E-13 1.7E-17 123.3 9.7 195 17-239 46-280 (373)
73 3e05_A Precorrin-6Y C5,15-meth 99.4 1.1E-12 3.7E-17 110.4 10.8 113 136-282 30-160 (204)
74 3jwh_A HEN1; methyltransferase 99.4 3.2E-13 1.1E-17 114.7 7.5 137 138-287 21-189 (217)
75 3mq2_A 16S rRNA methyltransfer 99.4 1.4E-12 4.7E-17 110.8 11.3 139 137-291 18-185 (218)
76 2yqz_A Hypothetical protein TT 99.4 4.2E-13 1.4E-17 116.9 8.1 137 147-289 37-195 (263)
77 4hg2_A Methyltransferase type 99.4 6.6E-13 2.3E-17 116.3 8.4 88 148-240 38-139 (257)
78 2xvm_A Tellurite resistance pr 99.4 1.4E-12 4.7E-17 108.7 9.8 130 136-290 22-173 (199)
79 3cc8_A Putative methyltransfer 99.4 8.8E-13 3E-17 112.2 8.5 144 134-290 21-185 (230)
80 3ggd_A SAM-dependent methyltra 99.4 5.4E-13 1.8E-17 115.3 5.8 137 147-290 54-219 (245)
81 3g5t_A Trans-aconitate 3-methy 99.4 1.6E-12 5.6E-17 115.9 9.0 136 148-289 35-208 (299)
82 1wzn_A SAM-dependent methyltra 99.3 6.5E-12 2.2E-16 108.9 11.7 82 148-234 40-143 (252)
83 3p2e_A 16S rRNA methylase; met 99.3 1.5E-12 5E-17 111.8 6.8 132 148-291 23-186 (225)
84 3q87_B N6 adenine specific DNA 99.3 1.7E-11 5.7E-16 100.4 12.6 112 148-297 22-157 (170)
85 4df3_A Fibrillarin-like rRNA/T 99.3 7.3E-12 2.5E-16 107.7 10.2 132 147-300 75-230 (233)
86 2kw5_A SLR1183 protein; struct 99.3 3.4E-12 1.2E-16 106.9 8.0 120 152-290 32-171 (202)
87 1ri5_A MRNA capping enzyme; me 99.3 3.2E-12 1.1E-16 113.3 7.7 140 147-290 62-250 (298)
88 3mb5_A SAM-dependent methyltra 99.3 1.3E-12 4.5E-17 113.7 4.6 95 136-236 83-194 (255)
89 2i62_A Nicotinamide N-methyltr 99.3 2.2E-12 7.4E-17 112.4 6.0 127 148-291 55-240 (265)
90 2aot_A HMT, histamine N-methyl 99.3 3.8E-12 1.3E-16 113.2 7.7 131 149-287 52-218 (292)
91 2p8j_A S-adenosylmethionine-de 99.3 1.8E-12 6.1E-17 109.1 5.2 138 147-288 21-181 (209)
92 3uwp_A Histone-lysine N-methyl 99.3 1.7E-12 5.7E-17 119.6 5.0 103 136-244 163-296 (438)
93 3orh_A Guanidinoacetate N-meth 99.3 1.7E-13 5.7E-18 118.5 -1.7 122 148-287 59-207 (236)
94 2gb4_A Thiopurine S-methyltran 99.3 5.9E-12 2E-16 109.9 8.1 120 148-290 67-227 (252)
95 3m33_A Uncharacterized protein 99.3 1.6E-12 5.6E-17 111.2 4.6 109 148-290 47-167 (226)
96 2nxc_A L11 mtase, ribosomal pr 99.3 6.5E-12 2.2E-16 109.7 8.2 117 147-296 118-250 (254)
97 2b3t_A Protein methyltransfera 99.3 9.1E-12 3.1E-16 109.9 9.2 122 148-301 108-275 (276)
98 3thr_A Glycine N-methyltransfe 99.3 2.3E-12 7.8E-17 114.3 5.0 94 136-237 47-176 (293)
99 1yb2_A Hypothetical protein TA 99.3 3.8E-12 1.3E-16 112.3 5.6 94 137-236 101-211 (275)
100 1nt2_A Fibrillarin-like PRE-rR 99.3 2.1E-11 7.1E-16 103.5 10.0 128 147-301 55-209 (210)
101 2a14_A Indolethylamine N-methy 99.2 1.4E-12 4.6E-17 114.5 2.2 126 148-290 54-238 (263)
102 3m70_A Tellurite resistance pr 99.2 2.7E-11 9.2E-16 107.1 9.5 128 136-288 110-258 (286)
103 1xdz_A Methyltransferase GIDB; 99.2 1E-11 3.6E-16 107.2 6.7 115 147-290 68-202 (240)
104 3kr9_A SAM-dependent methyltra 99.2 2.1E-11 7.1E-16 104.3 8.4 120 148-300 14-156 (225)
105 1g8a_A Fibrillarin-like PRE-rR 99.2 9.4E-11 3.2E-15 100.1 12.6 132 147-301 71-226 (227)
106 2h00_A Methyltransferase 10 do 99.2 7.6E-13 2.6E-17 115.2 -0.7 131 149-290 65-238 (254)
107 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.2E-11 4E-16 106.3 6.8 132 147-300 75-230 (233)
108 3fpf_A Mtnas, putative unchara 99.2 1.1E-11 3.9E-16 109.9 6.2 87 147-236 120-222 (298)
109 2frn_A Hypothetical protein PH 99.2 4.2E-11 1.4E-15 105.9 9.9 114 147-286 123-253 (278)
110 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.9E-11 6.5E-16 106.2 7.5 94 137-236 87-198 (258)
111 4dzr_A Protein-(glutamine-N5) 99.2 2.7E-12 9.3E-17 108.0 1.7 132 136-300 19-203 (215)
112 3lec_A NADB-rossmann superfami 99.2 4.1E-11 1.4E-15 102.7 9.0 120 148-300 20-162 (230)
113 3lpm_A Putative methyltransfer 99.2 5.2E-11 1.8E-15 104.0 9.2 121 147-300 46-217 (259)
114 4e2x_A TCAB9; kijanose, tetron 99.2 1.7E-11 5.7E-16 114.4 6.4 139 135-291 96-254 (416)
115 2gs9_A Hypothetical protein TT 99.2 2E-11 6.8E-16 102.9 6.2 123 149-288 36-176 (211)
116 3hm2_A Precorrin-6Y C5,15-meth 99.2 1.4E-11 4.7E-16 100.8 4.5 93 138-237 17-128 (178)
117 1dus_A MJ0882; hypothetical pr 99.2 3.6E-11 1.2E-15 99.2 7.1 94 136-237 42-158 (194)
118 1jsx_A Glucose-inhibited divis 99.2 1.6E-11 5.4E-16 103.2 4.8 83 150-235 66-164 (207)
119 2g72_A Phenylethanolamine N-me 99.2 2.4E-11 8.2E-16 107.7 5.7 125 149-290 71-256 (289)
120 1zx0_A Guanidinoacetate N-meth 99.2 3.2E-12 1.1E-16 110.1 -0.2 87 148-238 59-172 (236)
121 3ntv_A MW1564 protein; rossman 99.1 1.4E-11 4.8E-16 106.0 3.5 90 147-239 69-179 (232)
122 1o54_A SAM-dependent O-methylt 99.1 4E-11 1.4E-15 105.7 6.4 95 136-236 102-213 (277)
123 1yzh_A TRNA (guanine-N(7)-)-me 99.1 5.7E-11 2E-15 100.6 7.0 84 149-235 41-155 (214)
124 3gnl_A Uncharacterized protein 99.1 7.6E-11 2.6E-15 101.8 7.9 121 147-300 19-162 (244)
125 3id6_C Fibrillarin-like rRNA/T 99.1 2.7E-10 9.1E-15 98.0 11.2 132 147-300 74-229 (232)
126 3evz_A Methyltransferase; NYSG 99.1 1.8E-10 6E-15 98.4 10.0 115 147-292 53-208 (230)
127 3tfw_A Putative O-methyltransf 99.1 3E-11 1E-15 105.0 4.9 90 147-239 61-173 (248)
128 3opn_A Putative hemolysin; str 99.1 1.4E-11 4.6E-16 106.3 2.7 139 137-290 27-184 (232)
129 3giw_A Protein of unknown func 99.1 1.6E-10 5.4E-15 101.4 9.3 129 148-286 77-243 (277)
130 4dcm_A Ribosomal RNA large sub 99.1 5.1E-11 1.7E-15 109.8 6.5 94 137-236 213-334 (375)
131 2fca_A TRNA (guanine-N(7)-)-me 99.1 4.6E-11 1.6E-15 101.4 5.7 85 149-236 38-153 (213)
132 1l3i_A Precorrin-6Y methyltran 99.1 6.1E-11 2.1E-15 97.7 6.2 92 137-236 24-134 (192)
133 3njr_A Precorrin-6Y methylase; 99.1 9.7E-11 3.3E-15 98.8 7.3 115 138-288 47-178 (204)
134 1jg1_A PIMT;, protein-L-isoasp 99.1 1.2E-11 4E-16 106.5 1.5 95 135-236 80-189 (235)
135 2bm8_A Cephalosporin hydroxyla 99.1 1E-10 3.5E-15 101.0 7.0 87 148-237 80-188 (236)
136 2b25_A Hypothetical protein; s 99.1 1.5E-11 5.1E-16 111.6 1.8 147 136-290 95-281 (336)
137 2pxx_A Uncharacterized protein 99.1 1.4E-10 4.9E-15 97.4 7.5 89 147-239 40-162 (215)
138 3dxy_A TRNA (guanine-N(7)-)-me 99.1 3.6E-11 1.2E-15 102.6 3.7 85 149-236 34-150 (218)
139 3bwc_A Spermidine synthase; SA 99.1 1.2E-10 4E-15 104.4 6.6 116 148-290 94-240 (304)
140 2yxd_A Probable cobalt-precorr 99.1 1.5E-10 5E-15 94.8 6.6 114 136-287 25-154 (183)
141 2vdw_A Vaccinia virus capping 99.1 1.8E-10 6E-15 103.2 7.2 138 149-290 48-246 (302)
142 3bgv_A MRNA CAP guanine-N7 met 99.1 3.4E-10 1.2E-14 101.4 8.8 161 121-290 10-232 (313)
143 3g89_A Ribosomal RNA small sub 99.1 5.7E-11 1.9E-15 103.4 3.5 124 148-300 79-227 (249)
144 3duw_A OMT, O-methyltransferas 99.1 4.4E-11 1.5E-15 101.8 2.7 90 147-239 56-170 (223)
145 1nv8_A HEMK protein; class I a 99.1 1.4E-10 4.8E-15 102.9 6.0 83 148-234 122-247 (284)
146 3ofk_A Nodulation protein S; N 99.1 9.7E-11 3.3E-15 99.0 4.7 86 147-237 49-155 (216)
147 3mti_A RRNA methylase; SAM-dep 99.1 1.7E-10 5.9E-15 95.1 6.0 119 147-290 20-169 (185)
148 3ckk_A TRNA (guanine-N(7)-)-me 99.0 1.6E-10 5.4E-15 99.8 5.8 86 148-236 45-168 (235)
149 1p91_A Ribosomal RNA large sub 99.0 7.8E-11 2.7E-15 103.1 3.7 88 148-238 84-180 (269)
150 3gjy_A Spermidine synthase; AP 99.0 8.4E-11 2.9E-15 105.4 4.0 83 151-236 91-200 (317)
151 3r3h_A O-methyltransferase, SA 99.0 4.9E-11 1.7E-15 103.4 2.1 91 147-240 58-174 (242)
152 3tr6_A O-methyltransferase; ce 99.0 5.3E-11 1.8E-15 101.3 2.2 91 147-240 62-178 (225)
153 2pjd_A Ribosomal RNA small sub 99.0 1.3E-10 4.5E-15 105.8 4.9 96 136-237 186-304 (343)
154 1u2z_A Histone-lysine N-methyl 99.0 2.1E-10 7.2E-15 107.1 6.1 101 136-242 232-365 (433)
155 3eey_A Putative rRNA methylase 99.0 2E-10 6.9E-15 95.7 5.4 89 147-238 20-141 (197)
156 3b3j_A Histone-arginine methyl 99.0 2.3E-10 7.7E-15 108.7 6.4 93 135-234 147-261 (480)
157 3fzg_A 16S rRNA methylase; met 99.0 1.3E-10 4.3E-15 96.3 3.7 85 147-236 47-152 (200)
158 2gpy_A O-methyltransferase; st 99.0 1.1E-10 3.9E-15 100.0 3.6 90 147-239 52-163 (233)
159 3q7e_A Protein arginine N-meth 99.0 3.4E-10 1.2E-14 103.3 6.9 83 147-233 64-170 (349)
160 2fyt_A Protein arginine N-meth 99.0 3.1E-10 1.1E-14 103.2 6.4 87 141-233 58-168 (340)
161 1af7_A Chemotaxis receptor met 99.0 3.7E-10 1.3E-14 99.5 6.6 83 149-234 105-250 (274)
162 3htx_A HEN1; HEN1, small RNA m 99.0 6.7E-10 2.3E-14 109.8 8.5 91 141-237 715-835 (950)
163 3hp7_A Hemolysin, putative; st 99.0 5.6E-10 1.9E-14 99.0 7.1 139 137-290 75-232 (291)
164 2avd_A Catechol-O-methyltransf 99.0 1E-10 3.4E-15 99.9 1.9 90 147-239 67-182 (229)
165 3adn_A Spermidine synthase; am 99.0 2.2E-10 7.7E-15 102.1 3.7 86 148-236 82-198 (294)
166 3dr5_A Putative O-methyltransf 99.0 2.5E-10 8.5E-15 97.6 3.7 83 152-237 59-164 (221)
167 1i9g_A Hypothetical protein RV 99.0 4.7E-10 1.6E-14 98.7 5.2 96 136-237 89-204 (280)
168 3p9n_A Possible methyltransfer 99.0 7E-10 2.4E-14 91.9 5.9 86 148-237 43-154 (189)
169 1g6q_1 HnRNP arginine N-methyl 99.0 1E-09 3.5E-14 99.3 7.4 83 147-233 36-142 (328)
170 2yxe_A Protein-L-isoaspartate 98.9 2.8E-10 9.7E-15 96.1 3.6 94 137-236 68-177 (215)
171 2vdv_E TRNA (guanine-N(7)-)-me 98.9 8.4E-10 2.9E-14 95.6 6.6 85 148-235 48-172 (246)
172 2plw_A Ribosomal RNA methyltra 98.9 1.3E-09 4.3E-14 91.0 7.3 82 147-235 20-153 (201)
173 3c3p_A Methyltransferase; NP_9 98.9 1.8E-10 6.2E-15 97.1 2.1 90 147-239 54-163 (210)
174 2yvl_A TRMI protein, hypotheti 98.9 1.6E-09 5.4E-14 93.4 8.1 93 137-237 82-191 (248)
175 3u81_A Catechol O-methyltransf 98.9 3.2E-10 1.1E-14 96.5 3.6 89 147-239 56-173 (221)
176 3lbf_A Protein-L-isoaspartate 98.9 3.1E-10 1.1E-14 95.5 3.5 94 136-237 67-175 (210)
177 2hnk_A SAM-dependent O-methylt 98.9 2E-10 6.9E-15 99.0 2.3 90 147-239 58-184 (239)
178 1ej0_A FTSJ; methyltransferase 98.9 1.4E-09 4.8E-14 88.0 7.2 84 147-237 20-137 (180)
179 3c3y_A Pfomt, O-methyltransfer 98.9 4.9E-10 1.7E-14 96.6 4.5 88 147-237 68-182 (237)
180 2ozv_A Hypothetical protein AT 98.9 7.7E-10 2.6E-14 96.8 5.6 86 147-235 34-169 (260)
181 2avn_A Ubiquinone/menaquinone 98.9 7.3E-10 2.5E-14 96.6 5.4 137 148-292 53-215 (260)
182 1sui_A Caffeoyl-COA O-methyltr 98.9 2.7E-10 9.3E-15 99.0 2.6 90 147-239 77-193 (247)
183 3tma_A Methyltransferase; thum 98.9 9.4E-10 3.2E-14 100.5 5.9 95 136-236 193-317 (354)
184 3iv6_A Putative Zn-dependent a 98.9 5.9E-10 2E-14 97.5 4.1 93 134-237 33-149 (261)
185 2esr_A Methyltransferase; stru 98.9 4.5E-10 1.5E-14 91.9 3.1 96 136-237 20-139 (177)
186 2y1w_A Histone-arginine methyl 98.9 7.3E-10 2.5E-14 101.0 4.7 91 137-234 41-153 (348)
187 3a27_A TYW2, uncharacterized p 98.9 7.5E-10 2.6E-14 97.5 4.5 92 147-241 117-224 (272)
188 3r0q_C Probable protein argini 98.9 7.1E-10 2.4E-14 102.2 4.4 87 147-237 61-170 (376)
189 1o9g_A RRNA methyltransferase; 98.9 5.4E-10 1.9E-14 96.9 3.5 86 149-237 51-215 (250)
190 4hc4_A Protein arginine N-meth 98.9 1.4E-09 4.7E-14 99.9 6.3 80 150-233 84-186 (376)
191 1vbf_A 231AA long hypothetical 98.9 7.1E-10 2.4E-14 94.7 4.1 94 136-237 60-166 (231)
192 3sso_A Methyltransferase; macr 98.9 8.1E-10 2.8E-14 101.5 3.9 85 148-238 215-326 (419)
193 1iy9_A Spermidine synthase; ro 98.9 7E-10 2.4E-14 97.9 3.2 85 148-235 74-188 (275)
194 2pbf_A Protein-L-isoaspartate 98.9 9.6E-10 3.3E-14 93.7 3.8 88 147-237 78-194 (227)
195 2fhp_A Methylase, putative; al 98.9 5.3E-10 1.8E-14 92.0 2.0 85 148-236 43-154 (187)
196 3dou_A Ribosomal RNA large sub 98.9 2.5E-09 8.5E-14 89.2 6.0 89 138-237 16-140 (191)
197 1dl5_A Protein-L-isoaspartate 98.8 1.1E-09 3.9E-14 98.5 3.8 95 136-236 65-175 (317)
198 3cbg_A O-methyltransferase; cy 98.8 4.9E-10 1.7E-14 96.3 1.2 90 147-239 70-185 (232)
199 1i1n_A Protein-L-isoaspartate 98.8 1.8E-09 6.3E-14 91.8 4.5 87 147-236 75-182 (226)
200 2cmg_A Spermidine synthase; tr 98.8 2.3E-09 7.8E-14 94.0 5.0 83 148-235 71-170 (262)
201 1ws6_A Methyltransferase; stru 98.8 7.7E-10 2.6E-14 89.6 1.7 84 149-237 41-148 (171)
202 2ld4_A Anamorsin; methyltransf 98.8 2.3E-09 7.8E-14 87.7 4.5 98 147-282 10-128 (176)
203 2o07_A Spermidine synthase; st 98.8 1.2E-09 4.1E-14 97.8 2.8 86 148-236 94-209 (304)
204 3dmg_A Probable ribosomal RNA 98.8 3.1E-09 1.1E-13 98.0 5.6 83 149-236 233-340 (381)
205 1xj5_A Spermidine synthase 1; 98.8 1.3E-09 4.6E-14 98.7 3.1 85 148-235 119-234 (334)
206 2ift_A Putative methylase HI07 98.8 1.3E-09 4.5E-14 91.4 2.8 85 149-237 53-164 (201)
207 1r18_A Protein-L-isoaspartate( 98.8 8.3E-10 2.8E-14 94.3 1.5 87 147-236 82-194 (227)
208 2fpo_A Methylase YHHF; structu 98.8 2.6E-09 8.8E-14 89.7 4.5 85 149-237 54-161 (202)
209 2nyu_A Putative ribosomal RNA 98.8 7.4E-09 2.5E-13 85.8 7.1 84 147-237 20-146 (196)
210 1ixk_A Methyltransferase; open 98.8 4.9E-09 1.7E-13 94.3 5.7 94 141-239 112-249 (315)
211 2i7c_A Spermidine synthase; tr 98.8 1.8E-09 6E-14 95.7 2.6 85 148-235 77-191 (283)
212 3tm4_A TRNA (guanine N2-)-meth 98.8 6.2E-09 2.1E-13 95.8 6.3 108 147-290 215-352 (373)
213 1inl_A Spermidine synthase; be 98.8 2E-09 6.8E-14 96.0 2.7 85 148-235 89-204 (296)
214 3lcv_B Sisomicin-gentamicin re 98.8 1E-08 3.5E-13 88.7 6.9 121 148-292 131-273 (281)
215 1mjf_A Spermidine synthase; sp 98.8 2E-09 6.8E-14 95.3 2.5 84 148-235 74-192 (281)
216 2pt6_A Spermidine synthase; tr 98.8 1.5E-09 5.2E-14 97.9 1.6 85 148-235 115-229 (321)
217 3k6r_A Putative transferase PH 98.8 1.3E-08 4.6E-13 89.6 7.4 113 147-285 123-252 (278)
218 2b2c_A Spermidine synthase; be 98.7 1.7E-09 6E-14 97.1 1.2 85 148-235 107-221 (314)
219 3ajd_A Putative methyltransfer 98.7 6.7E-09 2.3E-13 91.5 4.5 94 141-239 77-214 (274)
220 1uir_A Polyamine aminopropyltr 98.7 3.6E-09 1.2E-13 95.1 1.8 86 148-236 76-195 (314)
221 2oxt_A Nucleoside-2'-O-methylt 98.7 1.1E-08 3.9E-13 89.6 4.5 84 147-237 72-186 (265)
222 2wa2_A Non-structural protein 98.7 9.6E-09 3.3E-13 90.6 3.9 83 147-236 80-193 (276)
223 2p41_A Type II methyltransfera 98.7 1.7E-08 5.6E-13 90.4 5.2 87 147-240 80-194 (305)
224 1zq9_A Probable dimethyladenos 98.6 1.2E-08 4E-13 90.5 3.6 74 135-213 17-99 (285)
225 2ih2_A Modification methylase 98.6 4.3E-08 1.5E-12 91.1 7.1 94 135-237 28-165 (421)
226 3gdh_A Trimethylguanosine synt 98.6 5.4E-10 1.9E-14 96.1 -5.5 123 149-292 78-221 (241)
227 3frh_A 16S rRNA methylase; met 98.6 3.9E-08 1.3E-12 84.2 6.0 81 148-236 104-205 (253)
228 2yxl_A PH0851 protein, 450AA l 98.6 5.5E-08 1.9E-12 91.6 7.3 95 141-240 253-393 (450)
229 3bzb_A Uncharacterized protein 98.5 1E-07 3.4E-12 84.2 6.7 87 147-235 77-204 (281)
230 2yx1_A Hypothetical protein MJ 98.5 3.5E-08 1.2E-12 89.4 3.6 86 148-239 194-294 (336)
231 2igt_A SAM dependent methyltra 98.5 3.5E-08 1.2E-12 89.3 3.6 84 149-237 153-273 (332)
232 1sqg_A SUN protein, FMU protei 98.5 3E-08 1E-12 92.8 3.1 90 147-239 244-377 (429)
233 3o4f_A Spermidine synthase; am 98.5 7.5E-08 2.6E-12 85.1 5.2 85 147-234 81-196 (294)
234 3m6w_A RRNA methylase; rRNA me 98.5 5.2E-08 1.8E-12 91.8 2.9 91 141-237 95-230 (464)
235 2frx_A Hypothetical protein YE 98.5 1.8E-07 6.1E-12 88.7 6.5 88 149-239 117-249 (479)
236 3k0b_A Predicted N6-adenine-sp 98.4 1.8E-07 6.2E-12 86.5 6.0 99 135-237 190-351 (393)
237 1qam_A ERMC' methyltransferase 98.4 2.7E-07 9.3E-12 79.7 6.6 67 135-206 19-91 (244)
238 3m4x_A NOL1/NOP2/SUN family pr 98.4 6.9E-08 2.4E-12 90.8 2.8 93 141-238 99-236 (456)
239 3gru_A Dimethyladenosine trans 98.4 2.2E-07 7.5E-12 82.6 5.6 74 135-213 39-120 (295)
240 3ldg_A Putative uncharacterize 98.4 3.2E-07 1.1E-11 84.5 6.8 99 135-237 183-344 (384)
241 3ldu_A Putative methylase; str 98.4 1.8E-07 6.1E-12 86.4 4.9 99 135-237 184-345 (385)
242 1ne2_A Hypothetical protein TA 98.4 1.6E-07 5.4E-12 78.2 4.1 65 147-213 49-116 (200)
243 1yub_A Ermam, rRNA methyltrans 98.4 3.5E-08 1.2E-12 85.3 -0.1 94 134-235 17-144 (245)
244 2h1r_A Dimethyladenosine trans 98.4 1.5E-07 5.1E-12 83.9 3.5 74 135-213 31-112 (299)
245 2b78_A Hypothetical protein SM 98.4 8.1E-08 2.8E-12 88.7 1.7 85 148-236 211-331 (385)
246 2xyq_A Putative 2'-O-methyl tr 98.3 3.2E-07 1.1E-11 81.2 5.1 79 147-236 61-171 (290)
247 4dmg_A Putative uncharacterize 98.3 2E-07 6.7E-12 86.3 3.6 84 149-237 214-327 (393)
248 2as0_A Hypothetical protein PH 98.3 9.4E-08 3.2E-12 88.5 0.8 85 149-237 217-336 (396)
249 2jjq_A Uncharacterized RNA met 98.3 9.5E-07 3.2E-11 82.5 7.5 82 147-235 288-386 (425)
250 4azs_A Methyltransferase WBDD; 98.3 2.7E-07 9.3E-12 89.4 3.9 90 147-241 64-178 (569)
251 2f8l_A Hypothetical protein LM 98.3 2.7E-07 9.2E-12 83.8 3.6 85 149-236 130-256 (344)
252 1wxx_A TT1595, hypothetical pr 98.3 9.7E-08 3.3E-12 88.0 0.5 84 149-237 209-326 (382)
253 3fut_A Dimethyladenosine trans 98.3 3.8E-07 1.3E-11 80.1 4.2 73 135-213 36-116 (271)
254 4gqb_A Protein arginine N-meth 98.3 5E-07 1.7E-11 87.9 5.0 113 109-232 323-463 (637)
255 1wy7_A Hypothetical protein PH 98.3 6.4E-07 2.2E-11 74.8 4.8 64 148-213 48-118 (207)
256 1uwv_A 23S rRNA (uracil-5-)-me 98.3 9.2E-07 3.1E-11 82.8 6.4 76 147-225 284-381 (433)
257 1m6y_A S-adenosyl-methyltransf 98.2 1.1E-06 3.8E-11 78.3 6.2 66 135-203 15-86 (301)
258 2qfm_A Spermine synthase; sper 98.2 3.3E-07 1.1E-11 83.2 2.3 85 148-237 187-314 (364)
259 3v97_A Ribosomal RNA large sub 98.2 3.9E-07 1.3E-11 90.3 3.0 85 147-235 537-656 (703)
260 3c0k_A UPF0064 protein YCCW; P 98.2 2.4E-07 8.2E-12 85.8 1.4 85 148-236 219-339 (396)
261 3uzu_A Ribosomal RNA small sub 98.2 4.2E-07 1.4E-11 80.2 2.7 70 135-207 31-106 (279)
262 3ftd_A Dimethyladenosine trans 98.2 1.2E-06 4.2E-11 75.9 5.5 69 135-207 20-92 (249)
263 3tqs_A Ribosomal RNA small sub 98.2 8.5E-07 2.9E-11 77.2 4.3 67 135-206 18-90 (255)
264 2okc_A Type I restriction enzy 98.1 1E-06 3.5E-11 82.8 4.0 96 136-237 161-308 (445)
265 2dul_A N(2),N(2)-dimethylguano 98.1 9.1E-07 3.1E-11 81.3 2.6 85 149-236 47-164 (378)
266 3bt7_A TRNA (uracil-5-)-methyl 98.0 8.5E-07 2.9E-11 81.3 1.1 83 150-237 214-327 (369)
267 2qy6_A UPF0209 protein YFCK; s 98.0 3.2E-06 1.1E-10 73.6 4.4 116 149-299 60-244 (257)
268 1qyr_A KSGA, high level kasuga 98.0 3.6E-06 1.2E-10 73.0 4.2 68 135-207 10-83 (252)
269 3v97_A Ribosomal RNA large sub 98.0 5.5E-06 1.9E-10 82.1 5.5 97 135-237 179-348 (703)
270 3ua3_A Protein arginine N-meth 98.0 2.8E-06 9.7E-11 82.8 3.0 112 109-232 378-530 (745)
271 3axs_A Probable N(2),N(2)-dime 98.0 2.6E-06 9E-11 78.5 2.6 86 148-236 51-158 (392)
272 2b9e_A NOL1/NOP2/SUN domain fa 97.9 1.5E-05 5E-10 71.3 6.5 71 141-213 96-180 (309)
273 3b5i_A S-adenosyl-L-methionine 97.9 7.6E-05 2.6E-09 68.2 10.7 34 150-183 53-101 (374)
274 2r6z_A UPF0341 protein in RSP 97.8 2.8E-06 9.7E-11 74.0 -0.6 55 147-203 81-150 (258)
275 2efj_A 3,7-dimethylxanthine me 97.7 0.00011 3.8E-09 67.3 8.6 33 150-182 53-102 (384)
276 3tka_A Ribosomal RNA small sub 97.7 6.2E-05 2.1E-09 67.3 6.4 66 135-203 46-115 (347)
277 3c6k_A Spermine synthase; sper 97.7 1.4E-05 4.8E-10 72.9 2.2 81 149-233 205-328 (381)
278 2k4m_A TR8_protein, UPF0146 pr 97.7 5.5E-05 1.9E-09 59.4 5.2 63 141-213 27-95 (153)
279 3evf_A RNA-directed RNA polyme 97.6 5.7E-05 1.9E-09 65.7 5.7 89 147-239 72-186 (277)
280 1rjd_A PPM1P, carboxy methyl t 97.6 0.00011 3.9E-09 66.1 7.7 130 148-283 96-281 (334)
281 4auk_A Ribosomal RNA large sub 97.6 5.7E-05 1.9E-09 68.6 5.5 77 147-225 209-295 (375)
282 2oyr_A UPF0341 protein YHIQ; a 97.6 1.1E-05 3.7E-10 70.2 0.6 73 136-213 76-170 (258)
283 2ar0_A M.ecoki, type I restric 97.6 2.3E-05 8E-10 75.3 2.3 96 136-237 159-313 (541)
284 1m6e_X S-adenosyl-L-methionnin 97.4 0.00041 1.4E-08 63.0 8.6 138 148-288 50-278 (359)
285 3gcz_A Polyprotein; flavivirus 97.4 8.4E-05 2.9E-09 64.7 3.7 88 147-239 88-203 (282)
286 3cvo_A Methyltransferase-like 97.3 0.00033 1.1E-08 58.4 6.1 92 147-245 28-162 (202)
287 1wg8_A Predicted S-adenosylmet 97.3 0.00032 1.1E-08 61.3 6.0 63 135-202 11-76 (285)
288 3s1s_A Restriction endonucleas 97.3 0.00025 8.5E-09 70.3 5.7 86 149-237 321-466 (878)
289 2px2_A Genome polyprotein [con 97.2 5.7E-05 2E-09 64.8 0.5 84 147-234 71-181 (269)
290 3lkd_A Type I restriction-modi 97.2 0.00019 6.5E-09 68.9 4.2 86 149-237 221-359 (542)
291 3khk_A Type I restriction-modi 97.1 8.8E-05 3E-09 71.3 0.3 95 135-236 234-395 (544)
292 3p8z_A Mtase, non-structural p 97.0 0.00069 2.3E-08 57.4 5.1 97 137-241 69-190 (267)
293 3ll7_A Putative methyltransfer 97.0 0.00029 1E-08 65.1 2.8 64 148-213 92-169 (410)
294 3eld_A Methyltransferase; flav 97.0 0.00063 2.2E-08 59.6 4.6 85 147-234 79-189 (300)
295 3iei_A Leucine carboxyl methyl 96.9 0.011 3.7E-07 53.1 12.4 136 149-290 90-281 (334)
296 2wk1_A NOVP; transferase, O-me 96.7 0.0015 5E-08 57.4 5.0 87 148-238 105-245 (282)
297 3lkz_A Non-structural protein 96.6 0.0018 6.1E-08 56.6 4.9 90 147-240 92-207 (321)
298 4fzv_A Putative methyltransfer 96.6 0.0015 5.3E-08 59.2 4.3 91 147-240 146-288 (359)
299 2uyo_A Hypothetical protein ML 96.4 0.0085 2.9E-07 53.3 8.1 130 148-285 101-274 (310)
300 1i4w_A Mitochondrial replicati 96.2 0.0058 2E-07 55.3 5.5 66 135-203 41-116 (353)
301 3r24_A NSP16, 2'-O-methyl tran 96.1 0.0035 1.2E-07 54.8 3.6 79 147-235 107-216 (344)
302 3vyw_A MNMC2; tRNA wobble urid 96.0 0.0093 3.2E-07 52.7 5.9 116 150-300 97-258 (308)
303 3ufb_A Type I restriction-modi 95.9 0.0075 2.5E-07 57.7 5.2 97 135-237 206-363 (530)
304 2zig_A TTHA0409, putative modi 95.6 0.014 4.7E-07 51.4 5.5 41 148-190 234-275 (297)
305 3iht_A S-adenosyl-L-methionine 94.9 0.27 9.1E-06 38.8 10.0 112 119-239 15-149 (174)
306 2oo3_A Protein involved in cat 93.0 0.069 2.3E-06 46.5 3.7 100 136-241 81-203 (283)
307 2vz8_A Fatty acid synthase; tr 92.7 0.019 6.4E-07 64.4 -0.3 130 150-289 1241-1394(2512)
308 2zwa_A Leucine carboxyl methyl 91.5 0.49 1.7E-05 46.5 8.3 135 149-290 107-309 (695)
309 1g60_A Adenine-specific methyl 90.9 0.3 1E-05 41.8 5.3 40 148-189 211-251 (260)
310 3tos_A CALS11; methyltransfera 90.4 0.21 7.3E-06 42.9 3.9 87 148-238 68-218 (257)
311 1jhg_A Trp operon repressor; c 89.8 0.31 1.1E-05 35.5 3.8 39 7-45 36-76 (101)
312 1y0u_A Arsenical resistance op 87.7 0.22 7.4E-06 35.6 1.8 44 15-60 32-87 (96)
313 2py6_A Methyltransferase FKBM; 87.4 0.78 2.7E-05 42.0 5.7 54 148-201 225-291 (409)
314 3b73_A PHIH1 repressor-like pr 85.1 0.29 1E-05 36.3 1.3 50 15-64 14-78 (111)
315 3pqk_A Biofilm growth-associat 85.0 0.79 2.7E-05 32.9 3.6 31 15-45 24-54 (102)
316 3ps9_A TRNA 5-methylaminomethy 84.8 0.65 2.2E-05 45.4 4.0 31 151-181 68-110 (676)
317 3pvc_A TRNA 5-methylaminomethy 84.3 0.74 2.5E-05 45.1 4.2 32 150-181 59-102 (689)
318 3kor_A Possible Trp repressor; 81.6 1.3 4.4E-05 33.1 3.5 37 8-45 55-93 (119)
319 2heo_A Z-DNA binding protein 1 80.5 0.3 1E-05 32.6 -0.2 31 15-45 11-43 (67)
320 3fwz_A Inner membrane protein 79.5 2 6.7E-05 32.6 4.2 51 151-203 8-60 (140)
321 1xmk_A Double-stranded RNA-spe 78.6 0.67 2.3E-05 32.1 1.1 50 11-60 8-73 (79)
322 3uko_A Alcohol dehydrogenase c 78.5 2.2 7.6E-05 38.3 4.9 89 147-238 191-297 (378)
323 3g7u_A Cytosine-specific methy 77.9 2.5 8.6E-05 38.2 5.0 51 151-203 3-56 (376)
324 3two_A Mannitol dehydrogenase; 76.7 0.75 2.6E-05 40.9 1.1 84 147-237 174-266 (348)
325 3frw_A Putative Trp repressor 76.3 3.3 0.00011 30.3 4.2 37 8-45 38-76 (107)
326 1zkd_A DUF185; NESG, RPR58, st 75.6 3.4 0.00012 37.5 5.2 57 117-181 55-119 (387)
327 2h6e_A ADH-4, D-arabinose 1-de 75.6 1.2 3.9E-05 39.6 2.1 86 147-237 169-270 (344)
328 1pqw_A Polyketide synthase; ro 75.1 1.6 5.6E-05 35.0 2.7 84 147-237 36-138 (198)
329 4ej6_A Putative zinc-binding d 74.8 7.5 0.00026 34.7 7.3 131 147-283 180-329 (370)
330 3ggo_A Prephenate dehydrogenas 74.5 2.1 7.2E-05 37.6 3.5 75 151-225 34-120 (314)
331 3jv7_A ADH-A; dehydrogenase, n 74.3 0.77 2.6E-05 40.7 0.5 89 147-238 169-272 (345)
332 3s2e_A Zinc-containing alcohol 74.1 2.4 8.3E-05 37.3 3.8 87 147-237 164-264 (340)
333 2g1u_A Hypothetical protein TM 73.9 12 0.00043 28.4 7.6 53 149-202 18-72 (155)
334 1r7j_A Conserved hypothetical 73.4 1.2 4.2E-05 31.8 1.4 45 18-63 12-67 (95)
335 1f8f_A Benzyl alcohol dehydrog 72.0 0.29 9.9E-06 44.1 -2.9 88 147-238 188-291 (371)
336 2c7p_A Modification methylase 72.0 3.1 0.00011 36.8 4.0 36 150-187 11-48 (327)
337 2dph_A Formaldehyde dismutase; 71.6 2.3 8E-05 38.4 3.1 87 147-238 183-301 (398)
338 1pl8_A Human sorbitol dehydrog 71.5 3.5 0.00012 36.6 4.2 87 147-237 169-274 (356)
339 4dvj_A Putative zinc-dependent 71.1 0.73 2.5E-05 41.3 -0.4 85 149-236 171-270 (363)
340 1e3j_A NADP(H)-dependent ketos 70.5 2 6.8E-05 38.1 2.4 87 147-237 166-272 (352)
341 3m6i_A L-arabinitol 4-dehydrog 70.2 4.7 0.00016 35.8 4.8 128 147-282 177-325 (363)
342 4eez_A Alcohol dehydrogenase 1 69.7 1.2 4E-05 39.4 0.7 88 147-237 161-264 (348)
343 3jth_A Transcription activator 69.4 2.5 8.7E-05 29.8 2.3 31 15-45 24-54 (98)
344 2hzt_A Putative HTH-type trans 69.3 2.1 7.1E-05 31.0 1.9 48 16-63 16-82 (107)
345 3f6o_A Probable transcriptiona 69.2 2.3 7.9E-05 31.3 2.1 31 15-45 19-49 (118)
346 1uuf_A YAHK, zinc-type alcohol 69.0 0.38 1.3E-05 43.3 -2.8 87 147-237 192-289 (369)
347 4a5n_A Uncharacterized HTH-typ 68.5 2.1 7.3E-05 32.5 1.8 48 16-63 28-94 (131)
348 3b1f_A Putative prephenate deh 68.3 3.5 0.00012 35.3 3.4 75 151-225 7-93 (290)
349 3tqh_A Quinone oxidoreductase; 68.0 0.71 2.4E-05 40.5 -1.2 85 147-235 150-244 (321)
350 1r1u_A CZRA, repressor protein 67.8 2.9 0.0001 30.1 2.4 31 15-45 27-57 (106)
351 1r1t_A Transcriptional repress 67.5 4.2 0.00014 30.2 3.3 31 15-45 47-77 (122)
352 3df8_A Possible HXLR family tr 67.5 2.1 7.2E-05 31.3 1.6 48 16-63 29-93 (111)
353 3vrd_B FCCB subunit, flavocyto 66.4 5.2 0.00018 35.8 4.3 32 150-181 2-35 (401)
354 1jvb_A NAD(H)-dependent alcoho 66.3 1.9 6.4E-05 38.2 1.3 88 147-237 168-272 (347)
355 1qgp_A Protein (double strande 64.9 1.8 6.3E-05 29.6 0.7 30 16-45 16-49 (77)
356 3mag_A VP39; methylated adenin 64.7 6.2 0.00021 34.3 4.1 79 148-240 59-142 (307)
357 2c0c_A Zinc binding alcohol de 64.2 6.2 0.00021 35.1 4.3 88 147-238 161-263 (362)
358 1boo_A Protein (N-4 cytosine-s 62.9 9.4 0.00032 33.5 5.2 40 148-189 251-291 (323)
359 3l9w_A Glutathione-regulated p 62.9 6 0.00021 36.2 4.0 79 151-234 5-100 (413)
360 2gmg_A Hypothetical protein PF 62.7 4.5 0.00015 29.4 2.5 26 15-40 12-37 (105)
361 1qbj_A Protein (double-strande 61.9 3.2 0.00011 28.7 1.5 30 16-45 12-45 (81)
362 2kko_A Possible transcriptiona 61.4 3.1 0.00011 30.1 1.5 30 16-45 27-56 (108)
363 1cdo_A Alcohol dehydrogenase; 61.3 5 0.00017 35.8 3.1 87 147-237 190-295 (374)
364 1g55_A DNA cytosine methyltran 60.1 6 0.00021 35.1 3.4 53 151-203 3-58 (343)
365 1v3u_A Leukotriene B4 12- hydr 60.0 3.1 0.00011 36.4 1.5 85 147-238 143-246 (333)
366 4f3n_A Uncharacterized ACR, CO 60.0 11 0.00038 34.7 5.1 56 116-181 114-174 (432)
367 3fpc_A NADP-dependent alcohol 59.1 0.55 1.9E-05 41.8 -3.7 88 147-239 164-269 (352)
368 1u2w_A CADC repressor, cadmium 58.7 5 0.00017 29.7 2.2 31 15-45 43-74 (122)
369 3qwb_A Probable quinone oxidor 58.5 4 0.00014 35.7 2.0 87 147-237 146-248 (334)
370 2oqg_A Possible transcriptiona 58.4 5.6 0.00019 28.6 2.5 31 15-45 22-52 (114)
371 2jsc_A Transcriptional regulat 57.9 4.9 0.00017 29.6 2.0 31 15-45 22-52 (118)
372 2jhf_A Alcohol dehydrogenase E 57.5 6.5 0.00022 35.0 3.2 86 147-237 189-294 (374)
373 3goh_A Alcohol dehydrogenase, 57.4 1.7 6E-05 37.8 -0.6 84 147-236 140-229 (315)
374 2j3h_A NADP-dependent oxidored 57.4 10 0.00036 33.1 4.5 84 147-237 153-256 (345)
375 3nx4_A Putative oxidoreductase 57.3 6 0.0002 34.4 2.9 82 152-237 149-242 (324)
376 2zkz_A Transcriptional repress 57.0 4.3 0.00015 28.8 1.6 31 15-45 28-59 (99)
377 1e3i_A Alcohol dehydrogenase, 56.2 6.8 0.00023 34.9 3.1 87 147-237 193-298 (376)
378 1z7u_A Hypothetical protein EF 56.0 2.7 9.3E-05 30.7 0.3 48 16-63 24-90 (112)
379 3f6v_A Possible transcriptiona 56.0 5.2 0.00018 31.1 2.0 31 15-45 59-89 (151)
380 3bdd_A Regulatory protein MARR 55.9 6.1 0.00021 29.3 2.4 49 15-63 32-99 (142)
381 2vxz_A Pyrsv_GP04; viral prote 55.6 9.8 0.00033 29.5 3.3 36 10-45 7-42 (165)
382 2f2e_A PA1607; transcription f 55.3 4.4 0.00015 31.1 1.5 48 16-63 26-90 (146)
383 2fzw_A Alcohol dehydrogenase c 55.1 5.7 0.0002 35.4 2.4 87 147-237 188-293 (373)
384 4a2c_A Galactitol-1-phosphate 54.8 36 0.0012 29.5 7.6 91 147-240 158-264 (346)
385 1p0f_A NADP-dependent alcohol 54.7 5.8 0.0002 35.3 2.4 87 147-237 189-294 (373)
386 3cuo_A Uncharacterized HTH-typ 54.7 7.3 0.00025 27.0 2.5 31 15-45 25-56 (99)
387 1eg2_A Modification methylase 54.3 17 0.00059 31.8 5.3 40 148-189 241-284 (319)
388 2fsw_A PG_0823 protein; alpha- 53.6 3.3 0.00011 29.9 0.4 48 16-63 27-93 (107)
389 3uog_A Alcohol dehydrogenase; 53.6 5.6 0.00019 35.3 2.1 87 147-238 187-289 (363)
390 2aef_A Calcium-gated potassium 53.3 25 0.00084 28.7 5.9 77 150-234 9-103 (234)
391 2lkp_A Transcriptional regulat 53.1 8.1 0.00028 28.1 2.6 31 15-45 33-63 (119)
392 3ubt_Y Modification methylase 52.9 8.1 0.00028 33.7 3.0 60 152-213 2-67 (331)
393 2g5c_A Prephenate dehydrogenas 52.8 9.5 0.00032 32.3 3.3 74 152-225 3-88 (281)
394 4b7c_A Probable oxidoreductase 52.6 11 0.00039 32.8 3.9 88 147-238 147-250 (336)
395 2dq4_A L-threonine 3-dehydroge 52.4 19 0.00067 31.4 5.4 83 147-237 163-263 (343)
396 1oyi_A Double-stranded RNA-bin 51.5 10 0.00036 26.2 2.7 32 14-45 17-48 (82)
397 4eye_A Probable oxidoreductase 51.1 3.6 0.00012 36.3 0.3 86 147-237 157-258 (342)
398 3gms_A Putative NADPH:quinone 50.9 4.8 0.00017 35.4 1.2 88 147-238 142-245 (340)
399 2vvp_A Ribose-5-phosphate isom 50.7 7.2 0.00024 30.8 2.0 44 153-196 64-107 (162)
400 3mq0_A Transcriptional repress 50.6 7.4 0.00025 33.3 2.3 46 15-60 31-90 (275)
401 1rjw_A ADH-HT, alcohol dehydro 50.4 14 0.00049 32.2 4.2 85 147-237 162-262 (339)
402 2htj_A P fimbrial regulatory p 50.1 9.7 0.00033 25.7 2.4 29 17-45 3-32 (81)
403 2wte_A CSA3; antiviral protein 50.1 5.8 0.0002 33.5 1.5 49 15-63 153-215 (244)
404 1vj0_A Alcohol dehydrogenase, 49.5 6.7 0.00023 35.1 1.9 88 147-238 193-300 (380)
405 3he8_A Ribose-5-phosphate isom 49.4 7.6 0.00026 30.2 1.9 43 155-197 62-104 (149)
406 4dcm_A Ribosomal RNA large sub 49.4 9.3 0.00032 34.3 2.8 81 149-237 38-137 (375)
407 3s5p_A Ribose 5-phosphate isom 48.9 8.3 0.00028 30.5 2.1 44 154-197 82-125 (166)
408 2zig_A TTHA0409, putative modi 48.8 4.4 0.00015 35.1 0.5 19 214-235 78-96 (297)
409 1lss_A TRK system potassium up 48.8 16 0.00056 26.6 3.8 51 151-203 5-58 (140)
410 1yyv_A Putative transcriptiona 47.9 4.2 0.00014 30.7 0.2 48 16-63 37-103 (131)
411 2ia2_A Putative transcriptiona 47.7 5.6 0.00019 33.8 1.0 46 15-60 22-80 (265)
412 3boq_A Transcriptional regulat 47.5 11 0.00038 28.6 2.7 31 15-45 48-80 (160)
413 2hcy_A Alcohol dehydrogenase 1 47.5 9.2 0.00032 33.6 2.5 84 147-237 167-270 (347)
414 3jyn_A Quinone oxidoreductase; 47.2 8.3 0.00028 33.5 2.1 88 147-238 138-241 (325)
415 2g7u_A Transcriptional regulat 47.2 5.7 0.0002 33.6 1.0 50 14-63 14-76 (257)
416 3hyw_A Sulfide-quinone reducta 46.9 17 0.00058 33.0 4.2 31 151-181 3-35 (430)
417 2gxg_A 146AA long hypothetical 46.8 8.7 0.0003 28.6 1.9 31 15-45 38-68 (146)
418 1o1x_A Ribose-5-phosphate isom 46.7 7.2 0.00025 30.5 1.4 43 153-195 72-114 (155)
419 3bja_A Transcriptional regulat 46.4 10 0.00034 28.0 2.2 31 15-45 34-65 (139)
420 1yb5_A Quinone oxidoreductase; 45.7 20 0.00069 31.5 4.4 84 147-237 168-270 (351)
421 1tbx_A ORF F-93, hypothetical 45.4 7.3 0.00025 27.3 1.2 49 15-63 9-77 (99)
422 3tgn_A ADC operon repressor AD 45.1 9.5 0.00032 28.5 1.9 32 14-45 38-69 (146)
423 3gaz_A Alcohol dehydrogenase s 44.8 2.1 7.1E-05 37.9 -2.3 86 147-237 148-247 (343)
424 3ph3_A Ribose-5-phosphate isom 44.8 8 0.00027 30.7 1.4 43 154-196 81-123 (169)
425 3l4b_C TRKA K+ channel protien 44.8 12 0.00043 30.3 2.7 78 152-234 2-97 (218)
426 1xa0_A Putative NADPH dependen 44.5 6.6 0.00022 34.2 1.0 82 152-237 152-247 (328)
427 3ech_A MEXR, multidrug resista 44.3 6.7 0.00023 29.3 0.9 31 15-45 38-69 (142)
428 3ono_A Ribose/galactose isomer 44.2 7.6 0.00026 32.1 1.2 40 152-191 68-107 (214)
429 3krt_A Crotonyl COA reductase; 44.0 14 0.00049 33.9 3.3 87 147-237 226-345 (456)
430 4fgs_A Probable dehydrogenase 43.9 29 0.00099 29.6 5.0 22 214-238 140-161 (273)
431 3k7p_A Ribose 5-phosphate isom 43.6 11 0.00037 30.2 2.0 43 155-197 86-128 (179)
432 4g6q_A Putative uncharacterize 43.6 12 0.00039 30.0 2.2 31 15-45 24-55 (182)
433 3dfz_A SIRC, precorrin-2 dehyd 43.3 19 0.00065 29.8 3.6 73 150-225 31-114 (223)
434 2vvr_A Ribose-5-phosphate isom 43.3 6.5 0.00022 30.6 0.7 48 153-200 61-110 (149)
435 3r4k_A Transcriptional regulat 42.8 4.8 0.00016 34.2 -0.2 45 16-60 8-67 (260)
436 3c5y_A Ribose/galactose isomer 42.6 8.4 0.00029 32.1 1.3 42 152-193 85-126 (231)
437 1xn7_A Hypothetical protein YH 42.5 9.9 0.00034 25.9 1.4 28 18-45 6-34 (78)
438 2ppw_A Conserved domain protei 41.9 7.1 0.00024 32.3 0.7 43 151-193 68-110 (216)
439 2xrn_A HTH-type transcriptiona 41.7 6.9 0.00023 32.8 0.6 47 16-62 8-69 (241)
440 1uly_A Hypothetical protein PH 41.3 16 0.00053 29.5 2.7 31 15-45 21-51 (192)
441 3sgw_A Ribose 5-phosphate isom 40.4 13 0.00044 29.9 2.0 43 155-197 94-136 (184)
442 3k0l_A Repressor protein; heli 40.1 11 0.00039 28.8 1.6 49 15-63 47-114 (162)
443 2b5w_A Glucose dehydrogenase; 40.1 9.4 0.00032 33.7 1.3 81 151-238 174-275 (357)
444 1vpt_A VP39; RNA CAP, poly(A) 40.0 30 0.001 30.4 4.4 52 150-202 76-131 (348)
445 4dup_A Quinone oxidoreductase; 39.7 7.4 0.00025 34.4 0.5 87 147-237 165-266 (353)
446 3fbg_A Putative arginate lyase 39.7 2.5 8.7E-05 37.4 -2.6 83 149-235 150-247 (346)
447 3cdh_A Transcriptional regulat 39.4 14 0.00048 27.9 2.1 31 15-45 44-75 (155)
448 2nnn_A Probable transcriptiona 39.0 5 0.00017 29.7 -0.6 31 15-45 39-70 (140)
449 1on2_A Transcriptional regulat 38.8 8.9 0.0003 28.8 0.8 45 19-63 13-70 (142)
450 3ip1_A Alcohol dehydrogenase, 38.1 35 0.0012 30.5 4.9 89 147-238 211-320 (404)
451 2i6t_A Ubiquitin-conjugating e 38.0 32 0.0011 29.8 4.4 61 150-212 14-82 (303)
452 2fbh_A Transcriptional regulat 37.6 14 0.00049 27.4 1.8 31 15-45 38-70 (146)
453 3nrv_A Putative transcriptiona 37.4 6.8 0.00023 29.4 -0.1 31 15-45 41-72 (148)
454 2fu4_A Ferric uptake regulatio 37.3 26 0.00088 23.4 3.0 31 15-45 18-56 (83)
455 2d8a_A PH0655, probable L-thre 37.2 23 0.0008 30.9 3.5 85 147-237 166-268 (348)
456 3is3_A 17BETA-hydroxysteroid d 36.7 83 0.0028 26.1 6.8 23 214-239 133-155 (270)
457 4em8_A Ribose 5-phosphate isom 36.3 7.9 0.00027 30.0 0.1 47 155-201 68-116 (148)
458 3k69_A Putative transcription 36.2 18 0.00061 28.3 2.2 21 25-45 26-46 (162)
459 1ub9_A Hypothetical protein PH 35.7 13 0.00045 25.7 1.2 31 15-45 17-48 (100)
460 1tt7_A YHFP; alcohol dehydroge 35.7 13 0.00044 32.3 1.4 82 152-237 153-248 (330)
461 3vtf_A UDP-glucose 6-dehydroge 35.6 8.6 0.00029 35.5 0.3 92 150-244 21-151 (444)
462 3c85_A Putative glutathione-re 35.0 38 0.0013 26.3 4.1 53 150-203 39-93 (183)
463 2k02_A Ferrous iron transport 35.0 11 0.00037 26.4 0.7 28 18-45 6-34 (87)
464 2lnb_A Z-DNA-binding protein 1 34.9 24 0.00083 24.0 2.4 31 15-45 20-52 (80)
465 1zcj_A Peroxisomal bifunctiona 34.7 41 0.0014 31.0 4.8 78 150-235 37-148 (463)
466 1tc3_C Protein (TC3 transposas 34.6 35 0.0012 19.5 3.0 25 20-45 15-39 (51)
467 2hr3_A Probable transcriptiona 34.5 24 0.00082 26.1 2.7 34 12-45 33-68 (147)
468 3oop_A LIN2960 protein; protei 34.4 10 0.00034 28.3 0.5 49 15-63 38-105 (143)
469 3dmg_A Probable ribosomal RNA 34.1 8.7 0.0003 34.6 0.1 87 138-236 38-139 (381)
470 1jko_C HIN recombinase, DNA-in 34.1 28 0.00095 20.4 2.5 25 19-44 14-38 (52)
471 3lsg_A Two-component response 34.0 13 0.00045 26.2 1.0 27 19-45 11-37 (103)
472 1zk8_A Transcriptional regulat 33.9 38 0.0013 25.7 3.9 41 5-45 6-46 (183)
473 3v2g_A 3-oxoacyl-[acyl-carrier 33.9 1E+02 0.0036 25.6 7.0 22 214-238 146-167 (271)
474 4eqs_A Coenzyme A disulfide re 33.9 40 0.0014 30.6 4.6 30 152-181 2-33 (437)
475 2bll_A Protein YFBG; decarboxy 33.8 56 0.0019 27.9 5.4 51 152-203 2-56 (345)
476 4a0s_A Octenoyl-COA reductase/ 33.3 15 0.00053 33.4 1.6 87 147-237 218-337 (447)
477 3ijr_A Oxidoreductase, short c 33.3 92 0.0032 26.2 6.6 21 214-237 163-183 (291)
478 3i4p_A Transcriptional regulat 33.2 29 0.00099 26.8 3.0 30 16-45 5-35 (162)
479 3hsr_A HTH-type transcriptiona 33.0 10 0.00036 28.2 0.4 49 15-63 37-104 (140)
480 1mkm_A ICLR transcriptional re 32.9 15 0.00051 30.7 1.4 44 16-59 10-67 (249)
481 1sfx_A Conserved hypothetical 32.8 25 0.00085 24.4 2.4 31 15-45 21-52 (109)
482 2zcm_A Biofilm operon icaabcd 32.5 56 0.0019 25.0 4.7 42 4-45 4-45 (192)
483 2fd5_A Transcriptional regulat 32.3 25 0.00085 26.8 2.5 39 7-45 7-45 (180)
484 3slg_A PBGP3 protein; structur 32.2 40 0.0014 29.4 4.2 52 150-202 24-79 (372)
485 3g3z_A NMB1585, transcriptiona 32.2 12 0.00042 27.9 0.6 48 15-62 32-98 (145)
486 2o0y_A Transcriptional regulat 32.2 14 0.00047 31.3 1.0 44 16-59 25-82 (260)
487 3pid_A UDP-glucose 6-dehydroge 32.1 29 0.00098 31.9 3.2 38 150-188 36-74 (432)
488 3lwf_A LIN1550 protein, putati 32.0 14 0.00047 28.9 0.9 21 25-45 42-62 (159)
489 2pn6_A ST1022, 150AA long hypo 31.6 30 0.001 26.1 2.8 31 15-45 4-35 (150)
490 1bl0_A Protein (multiple antib 31.6 16 0.00056 27.0 1.2 20 26-45 26-45 (129)
491 2jpc_A SSRB; DNA binding prote 31.5 23 0.0008 21.9 1.9 28 17-45 4-31 (61)
492 3fpz_A Thiazole biosynthetic e 31.5 33 0.0011 29.5 3.4 31 151-181 66-98 (326)
493 2y75_A HTH-type transcriptiona 31.5 13 0.00043 27.6 0.6 21 25-45 24-44 (129)
494 3ged_A Short-chain dehydrogena 31.4 1.1E+02 0.0038 25.4 6.6 51 151-202 3-57 (247)
495 2rdp_A Putative transcriptiona 31.3 13 0.00044 27.8 0.6 31 15-45 43-74 (150)
496 2bv6_A MGRA, HTH-type transcri 31.1 20 0.00068 26.5 1.7 31 15-45 38-69 (142)
497 1lj9_A Transcriptional regulat 31.0 8 0.00027 28.8 -0.7 30 16-45 31-61 (144)
498 1boo_A Protein (N-4 cytosine-s 30.9 13 0.00043 32.6 0.6 19 214-235 65-83 (323)
499 2x4h_A Hypothetical protein SS 30.7 19 0.00066 26.7 1.5 38 25-62 29-77 (139)
500 3ic5_A Putative saccharopine d 30.6 76 0.0026 22.0 4.8 50 151-203 6-59 (118)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=5.8e-49 Score=362.10 Aligned_cols=277 Identities=16% Similarity=0.302 Sum_probs=247.1
Q ss_pred HHHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------e----ecCCCeEEcChhcc-hhhcCCCCChhhhhh
Q 043533 14 QGQAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------V----NGQEEAYGLTAAST-LLIKDKPYCLSPTVS 75 (301)
Q Consensus 14 ~~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------v----e~~~~~y~~t~~s~-~L~~~~~~~l~~~~~ 75 (301)
+++|||||+|.+ +|+|++|||+++|++++.++ + +..++.|.||++++ +|++++|.+++.++.
T Consensus 28 a~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~t~~s~~~l~~~~~~~~~~~~~ 107 (353)
T 4a6d_A 28 ACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLK 107 (353)
T ss_dssp HHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHSTTSTTCCHHHHH
T ss_pred HHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEeccCccceeeCCHHHHHHhhcCCchHHHHHHH
Confidence 469999999964 78999999999999999877 1 23356899999997 788999999999998
Q ss_pred hhcCccchhhHHHHHhhhcCCCCchhHHhhCC---ChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCe
Q 043533 76 VFVDPFFVAPFQSLSSWFKGTELTLWETVHGI---KFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGS 152 (301)
Q Consensus 76 ~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~---~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (301)
+.. ...++.|.+|.+++++|+ ++|...+|. ++|+++.++|+....|.++|...+....+.++ +.++ +++..+
T Consensus 108 ~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~-~~~~--~~~~~~ 182 (353)
T 4a6d_A 108 YMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVL-TAFD--LSVFPL 182 (353)
T ss_dssp HHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHH-HSSC--GGGCSE
T ss_pred HhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH-HhcC--cccCCe
Confidence 864 567899999999999998 668888884 58999999999999999999998877788899 9998 888899
Q ss_pred EEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC------CCCeEEEeCCCCC-CCCcchhHHH------------
Q 043533 153 LVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE------ADNLKYIAGDMLR-FIPPANAFLF------------ 213 (301)
Q Consensus 153 vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~------~~ri~~~~~D~~~-~~p~~D~i~~------------ 213 (301)
|||||||+|.++..++++||+++++++|+|+|++.+++ .+||+|+.+|||+ +.|.+|+|++
T Consensus 183 v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~ 262 (353)
T 4a6d_A 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKC 262 (353)
T ss_dssp EEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGSCHHHH
T ss_pred EEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeecccCCHHHH
Confidence 99999999999999999999999999999999987763 5899999999998 5667999887
Q ss_pred -HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCC
Q 043533 214 -KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFG 292 (301)
Q Consensus 214 -~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 292 (301)
+||++++++|+| ||+|+|+|.+++++...+ .....+|+.|++..+|++||.+||++||++|||+.++++++++
T Consensus 263 ~~iL~~~~~al~p---gg~lli~e~~~~~~~~~~---~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~ 336 (353)
T 4a6d_A 263 SHLLERIYHTCKP---GGGILVIESLLDEDRRGP---LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGA 336 (353)
T ss_dssp HHHHHHHHHHCCT---TCEEEEEECCCCTTSCCC---HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHhhCCC---CCEEEEEEeeeCCCCCCC---HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 899999999999 999999999998876654 2346789999988999999999999999999999999999988
Q ss_pred ceeEEEEeC
Q 043533 293 MKSLIEVYP 301 (301)
Q Consensus 293 ~~~~i~a~~ 301 (301)
..++|+|+|
T Consensus 337 ~~~~i~ArK 345 (353)
T 4a6d_A 337 IYDAILARK 345 (353)
T ss_dssp SCEEEEEEC
T ss_pred ceEEEEEEe
Confidence 899999997
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=3.6e-45 Score=338.11 Aligned_cols=283 Identities=25% Similarity=0.420 Sum_probs=245.3
Q ss_pred HHHHHHHhHHhcC---CCCCHHHHHHhcCC--CCC---Cce----------e--ec----C----CCeEEcChhcchhhc
Q 043533 13 FQGQAQLYKLIHG---RAITLSELVSALDI--QPT---KTT----------V--NG----Q----EEAYGLTAASTLLIK 64 (301)
Q Consensus 13 ~~~~l~lF~~L~~---~p~t~~elA~~~~~--~~~---~l~----------v--e~----~----~~~y~~t~~s~~L~~ 64 (301)
.+++||||++|.+ +|+|++|||+++++ +++ .|+ + +. + +++|.+|+.+++|+.
T Consensus 39 ~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~g~~~~~y~~t~~s~~l~~ 118 (364)
T 3p9c_A 39 NAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTP 118 (364)
T ss_dssp HHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEEEEEEECSSSCEEEEEEECGGGGGSSC
T ss_pred HHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEEEeccccCCCCcCCEEecCHHHHHHcC
Confidence 3479999999976 69999999999998 887 555 1 22 1 478999999998776
Q ss_pred C-CCCChhhhhhhhcCccchhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhh
Q 043533 65 D-KPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSEC 143 (301)
Q Consensus 65 ~-~~~~l~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~ 143 (301)
+ ++.++++++.+..++.++..|.+|.+++++|. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.++ +.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~-~~~ 196 (364)
T 3p9c_A 119 NEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLL-ELY 196 (364)
T ss_dssp CTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HHC
T ss_pred CCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHH-Hhc
Confidence 5 47799999887666677899999999999998 78999999999999999999999999999988777777788 777
Q ss_pred hhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH----------
Q 043533 144 KQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPPANAFLF---------- 213 (301)
Q Consensus 144 ~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~---------- 213 (301)
+ .+++..+|||||||+|.++..+++++|+++++++|+|++++.+++.+||+|+.+|+++++|..|+|++
T Consensus 197 ~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 197 H-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQ 275 (364)
T ss_dssp C-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGSCHH
T ss_pred c-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccCCHH
Confidence 6 36778999999999999999999999999999999999999999889999999999988887788876
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc-ccCCccCCHHHHHHHHHhCCCceeEEEe
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV-NATGKERTESEWAKLFFDAVFSHYKITP 289 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 289 (301)
++|++++++|+| ||+|+|+|.+.++....+........+|+.|+. ..+|++||.+||+++|+++||+.+++.+
T Consensus 276 ~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 276 HCATLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HHHHHHHHHHHHSCT---TCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 899999999999 999999999988765432111223568888885 4789999999999999999999999999
Q ss_pred cCCceeEEEEeC
Q 043533 290 IFGMKSLIEVYP 301 (301)
Q Consensus 290 ~~~~~~~i~a~~ 301 (301)
+++..++||++|
T Consensus 353 ~~~~~~vie~~k 364 (364)
T 3p9c_A 353 IYANAWAIEFTK 364 (364)
T ss_dssp EETTEEEEEEEC
T ss_pred cCCceEEEEEeC
Confidence 998899999987
No 3
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=4.3e-44 Score=328.92 Aligned_cols=277 Identities=22% Similarity=0.349 Sum_probs=246.2
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e-ecCCCeEEcChhcchhhcCCCCChhhhhhhhcCccc
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V-NGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFF 82 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v-e~~~~~y~~t~~s~~L~~~~~~~l~~~~~~~~~~~~ 82 (301)
+++||||++|.++|+|++|||+++|++++.++ + ++++++|.+|+.++.|++++|.++++++.++.++..
T Consensus 42 a~~lglf~~l~~g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~ 121 (348)
T 3lst_A 42 AAAVGVADHLVDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFALTDKGAALRSDSPVPARAGILMFTDTMF 121 (348)
T ss_dssp HHHHTGGGGGTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECTTTGGGSTTSSSCSHHHHHHHTSHHH
T ss_pred HHHcCchhHhhCCCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEecCCEEecCHHHHHHhcCCCccHHHHHHHhcCHHH
Confidence 47999999999899999999999999999887 1 348899999999998888888899999887655557
Q ss_pred hhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCccH
Q 043533 83 VAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVS 162 (301)
Q Consensus 83 ~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~ 162 (301)
++.|.+|++++++|+ ++|+..+|.++|+|+.++|+..+.|.++|...+....+.++ +.++ +++..+|||||||+|.
T Consensus 122 ~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~-~~~~--~~~~~~vLDvG~G~G~ 197 (348)
T 3lst_A 122 WTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILA-RAGD--FPATGTVADVGGGRGG 197 (348)
T ss_dssp HHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHH-HHSC--CCSSEEEEEETCTTSH
T ss_pred HHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHH-HhCC--ccCCceEEEECCccCH
Confidence 899999999999998 67999999999999999999999999999998887788889 8888 7888999999999999
Q ss_pred HHHHHHHHCCCCeEEEeechHHHhcCCC-----CCCeEEEeCCCCCCCCcchhHHH-------------HHHHHHHHhcc
Q 043533 163 FSRIISEAFPGIKCTVLDLPHAVANLPE-----ADNLKYIAGDMLRFIPPANAFLF-------------KILKKRREAIA 224 (301)
Q Consensus 163 ~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-----~~ri~~~~~D~~~~~p~~D~i~~-------------~iL~~~~~aL~ 224 (301)
++..+++++|+++++++|+|+++...+. .+||+++.+|+++++|.||+|++ ++|++++++|+
T Consensus 198 ~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 198 FLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMP 277 (348)
T ss_dssp HHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988873331 57899999999987888999887 89999999999
Q ss_pred cCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 225 SNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 225 p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
| ||+++|.|...++..... ....+|+.|+...+|+.||.+||+++|+++||+.+++.+..+..++||++|
T Consensus 278 p---gG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 278 A---HGRVLVIDAVVPEGNDAH----QSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp T---TCEEEEEECCBCSSSSCC----HHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred C---CCEEEEEEeccCCCCCcc----hhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 9 999999999888764331 235678888877889999999999999999999999999777899999986
No 4
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=1.7e-43 Score=327.39 Aligned_cols=283 Identities=25% Similarity=0.423 Sum_probs=242.6
Q ss_pred HHHHHHHhHHhcC--C---CCCHHHHHHhcC-CCCC---Cce----------e--ec----C----CCeEEcChhcchhh
Q 043533 13 FQGQAQLYKLIHG--R---AITLSELVSALD-IQPT---KTT----------V--NG----Q----EEAYGLTAASTLLI 63 (301)
Q Consensus 13 ~~~~l~lF~~L~~--~---p~t~~elA~~~~-~~~~---~l~----------v--e~----~----~~~y~~t~~s~~L~ 63 (301)
.+++||||++|.+ | |+|++|||++++ .+++ .++ + +. + +++|.+|+.++.|.
T Consensus 40 ~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~l~ 119 (368)
T 3reo_A 40 AAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLT 119 (368)
T ss_dssp HHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECTTHHHHS
T ss_pred HHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCeEEecccCCCCcccceeCcCHHHHHHh
Confidence 3479999999976 4 599999999998 4665 444 1 22 2 36899999999766
Q ss_pred cC-CCCChhhhhhhhcCccchhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhh
Q 043533 64 KD-KPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSE 142 (301)
Q Consensus 64 ~~-~~~~l~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~ 142 (301)
.+ ++.++++++.+..++.++..|.+|.+++++|. ++|+..+|.++|+|+..+|+..+.|.++|...+....+.++ +.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~-~~ 197 (368)
T 3reo_A 120 KNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKIL-EM 197 (368)
T ss_dssp CCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred CCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHH-Hh
Confidence 54 57899999887756677899999999999997 78999999999999999999999999999988777777788 77
Q ss_pred hhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH---------
Q 043533 143 CKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPPANAFLF--------- 213 (301)
Q Consensus 143 ~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~--------- 213 (301)
++ .+++..+|||||||+|.++..+++++|+++++++|+|++++.+++.+||+|+.+|+++++|..|+|++
T Consensus 198 ~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 198 YN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSD 276 (368)
T ss_dssp CC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGBCH
T ss_pred cc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhhcCCH
Confidence 75 36778999999999999999999999999999999999999999889999999999988887788876
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccc-cCCccCCHHHHHHHHHhCCCceeEEE
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKERTESEWAKLFFDAVFSHYKIT 288 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~g~~rt~~e~~~ll~~aGf~~~~~~ 288 (301)
++|++++++|+| ||+|+|+|...++....+........+|+.|+.. .+|++||.+||+++|+++||+.+++.
T Consensus 277 ~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 277 EHCLKLLKNCYAALPD---HGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp HHHHHHHHHHHHHSCT---TCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 799999999999 9999999999887654321112235688888865 58999999999999999999999999
Q ss_pred ecCCceeEEEEeC
Q 043533 289 PIFGMKSLIEVYP 301 (301)
Q Consensus 289 ~~~~~~~~i~a~~ 301 (301)
++.+..++||++|
T Consensus 354 ~~~~~~~vie~~k 366 (368)
T 3reo_A 354 SCAFNTYVMEFLK 366 (368)
T ss_dssp EEETTEEEEEEEC
T ss_pred EeCCCcEEEEEEe
Confidence 9988899999986
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=9e-44 Score=329.33 Aligned_cols=276 Identities=24% Similarity=0.421 Sum_probs=247.5
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e--ecCCCe-EEcChhcchhhcCCCCChhhhhhhhcCc
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V--NGQEEA-YGLTAASTLLIKDKPYCLSPTVSVFVDP 80 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v--e~~~~~-y~~t~~s~~L~~~~~~~l~~~~~~~~~~ 80 (301)
+++||||++|.++|+|++|||+++|++++.++ + +.++++ |.+|+.++.|+++++.++++++.+..++
T Consensus 58 a~~lglf~~l~~g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~ 137 (369)
T 3gwz_A 58 AVELGVPELLQEGPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDDLFAQNALSAVLLPDPASPVATDARFQAAP 137 (369)
T ss_dssp HHHHTTGGGGTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECSSTTEEECCHHHHTTSCCTTCHHHHHHHHHHSH
T ss_pred HHHCChhhhhcCCCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeCCCceEecCHHHHHHhcCCchhHHHHHHHcCCH
Confidence 47999999999999999999999999999887 1 456788 9999999989888888999999887655
Q ss_pred cchhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCc
Q 043533 81 FFVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGN 160 (301)
Q Consensus 81 ~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~ 160 (301)
..++.|.+|.+++++|+ ++|...+|.++|+|+.++|+..+.|.++|...+....+.++ +.++ +++..+|||||||+
T Consensus 138 ~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~-~~~~--~~~~~~vlDvG~G~ 213 (369)
T 3gwz_A 138 WHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQVA-AAYD--FSGAATAVDIGGGR 213 (369)
T ss_dssp HHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HHSC--CTTCSEEEEETCTT
T ss_pred HHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHH-HhCC--CccCcEEEEeCCCc
Confidence 57899999999999998 67999999999999999999999999999988877778888 8888 77889999999999
Q ss_pred cHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCc-chhHHH-------------HHHHHH
Q 043533 161 VSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRFIPP-ANAFLF-------------KILKKR 219 (301)
Q Consensus 161 G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~~p~-~D~i~~-------------~iL~~~ 219 (301)
|.++..+++++|+++++++|+|.+++.+++ .+||+|+.+|+++++|. ||+|++ ++|+++
T Consensus 214 G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~ 293 (369)
T 3gwz_A 214 GSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRI 293 (369)
T ss_dssp SHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHH
Confidence 999999999999999999999999988874 47899999999988885 999887 699999
Q ss_pred HHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEe-cCCceeEEE
Q 043533 220 REAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITP-IFGMKSLIE 298 (301)
Q Consensus 220 ~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~ 298 (301)
+++|+| ||+++|+|...++..... ...+|+.|+...+|++||.+||+++|+++||+++++.+ ..+..++||
T Consensus 294 ~~~L~p---gG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie 365 (369)
T 3gwz_A 294 ATAMKP---DSRLLVIDNLIDERPAAS-----TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVE 365 (369)
T ss_dssp HTTCCT---TCEEEEEEEBCCSSCCHH-----HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEE
T ss_pred HHHcCC---CCEEEEEEeccCCCCCCc-----hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEE
Confidence 999999 999999999888765431 35678888877899999999999999999999999999 577899999
Q ss_pred EeC
Q 043533 299 VYP 301 (301)
Q Consensus 299 a~~ 301 (301)
++|
T Consensus 366 ~~~ 368 (369)
T 3gwz_A 366 IRR 368 (369)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 6
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=9.6e-44 Score=324.45 Aligned_cols=273 Identities=22% Similarity=0.305 Sum_probs=240.3
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e--ecCCCeEEcChhcchhhcCCCCChhhhhhhhcCcc
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V--NGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPF 81 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v--e~~~~~y~~t~~s~~L~~~~~~~l~~~~~~~~~~~ 81 (301)
+++||||++|.+||+|++|||+++|++++.++ + +.++++|.+|+.++.|+++++.++++++.+..+..
T Consensus 25 a~~lglf~~l~~g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~ 104 (332)
T 3i53_A 25 AATLRVADHIAAGHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDGQGVYGLTEFGEQLRDDHAAGKRKWLDMNSAVG 104 (332)
T ss_dssp HHHHTHHHHHHTTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTTSBEEECTTGGGGSTTCTTCCHHHHCTTSHHH
T ss_pred HHHcChHHHHhcCCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecCCCeEEcCHhHHHHhcCCchhHHHHHHHcCCHh
Confidence 57999999999899999999999999999887 1 45689999999999888888888999988764334
Q ss_pred ch-hhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCc
Q 043533 82 FV-APFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGN 160 (301)
Q Consensus 82 ~~-~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~ 160 (301)
.+ +.|.+|++++++|+ ++|+..+|.++|+|+.++|+..+.|..+|...+....+.++ +.++ +++..+|||||||+
T Consensus 105 ~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~-~~~~--~~~~~~vlDvG~G~ 180 (332)
T 3i53_A 105 RGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIA-AKYD--WAALGHVVDVGGGS 180 (332)
T ss_dssp HHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGG-GSSC--CGGGSEEEEETCTT
T ss_pred HHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHH-HhCC--CCCCCEEEEeCCCh
Confidence 55 88999999999998 67999999999999999999999999999987766666677 7777 67779999999999
Q ss_pred cHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCc-chhHHH-------------HHHHHH
Q 043533 161 VSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRFIPP-ANAFLF-------------KILKKR 219 (301)
Q Consensus 161 G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~~p~-~D~i~~-------------~iL~~~ 219 (301)
|.++..+++++|+++++++|+|++++.+++ .+||+|+.+|+++++|. ||+|++ ++|+++
T Consensus 181 G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~ 260 (332)
T 3i53_A 181 GGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRC 260 (332)
T ss_dssp SHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccCCHHHHHHHHHHH
Confidence 999999999999999999999999988874 47899999999988885 999887 899999
Q ss_pred HHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEE
Q 043533 220 REAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEV 299 (301)
Q Consensus 220 ~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a 299 (301)
+++|+| ||+++|.|...++. .+ ...+|+.|+...+|++||.+||+++|+++||+.+++.++++ .++||+
T Consensus 261 ~~~L~p---gG~l~i~e~~~~~~--~~-----~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~ 329 (332)
T 3i53_A 261 AEAAGS---GGVVLVIEAVAGDE--HA-----GTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VSIVEM 329 (332)
T ss_dssp HHHHTT---TCEEEEEECCCC-----C-----CHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEE
T ss_pred HHhcCC---CCEEEEEeecCCCC--Cc-----cHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEE
Confidence 999999 99999999988776 22 24678888777889999999999999999999999999988 999999
Q ss_pred eC
Q 043533 300 YP 301 (301)
Q Consensus 300 ~~ 301 (301)
++
T Consensus 330 r~ 331 (332)
T 3i53_A 330 TA 331 (332)
T ss_dssp EE
T ss_pred ee
Confidence 85
No 7
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3e-42 Score=314.60 Aligned_cols=273 Identities=23% Similarity=0.371 Sum_probs=240.3
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e--ecCCCeEEcChhcchhhcCCCCChhhhhhhhcCcc
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V--NGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPF 81 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v--e~~~~~y~~t~~s~~L~~~~~~~l~~~~~~~~~~~ 81 (301)
+++||||++|.++|+|++|||+++|++++.++ + +.+++.|.+|+.++.|+ ++|.++++++.+..+..
T Consensus 28 ~~~lgi~~~l~~~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~~~~y~~t~~s~~l~-~~~~~~~~~~~~~~~~~ 106 (334)
T 2ip2_A 28 ATRLGLADLIESGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYANTPTSHLLR-DVEGSFRDMVLFYGEEF 106 (334)
T ss_dssp HHHTTHHHHHHTTCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHTTS-SSTTCSHHHHHHHTTHH
T ss_pred HHHcCcHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecCCCeEecCHHHHHHh-CCCccHHHHHHHhcCch
Confidence 36999999999899999999999999999887 1 45668999999999888 88889999998875443
Q ss_pred chhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCcc
Q 043533 82 FVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNV 161 (301)
Q Consensus 82 ~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G 161 (301)
. +.|.+|++++++|+ ++|+..+|.++|+|+.++|+..+.|.++| ..+....+.++ +.++ +++ .+|||||||+|
T Consensus 107 ~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~-~~~~--~~~-~~vlDvG~G~G 179 (334)
T 2ip2_A 107 H-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIP-RLLD--FRG-RSFVDVGGGSG 179 (334)
T ss_dssp H-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHH-HHSC--CTT-CEEEEETCTTC
T ss_pred h-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHH-HhCC--CCC-CEEEEeCCCch
Confidence 4 89999999999998 78998899999999999999999999999 77776777888 8887 677 99999999999
Q ss_pred HHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCc-chhHHH-------------HHHHHHH
Q 043533 162 SFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRFIPP-ANAFLF-------------KILKKRR 220 (301)
Q Consensus 162 ~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~~p~-~D~i~~-------------~iL~~~~ 220 (301)
.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++|. ||+|++ ++|++++
T Consensus 180 ~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~ 259 (334)
T 2ip2_A 180 ELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCR 259 (334)
T ss_dssp HHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHH
Confidence 99999999999999999999888887764 47899999999988777 999887 8999999
Q ss_pred HhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEe
Q 043533 221 EAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 221 ~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~ 300 (301)
++|+| ||+++|.|...++.... .....+|+.|+...+|++||.+||+++++++||+.+++.+.++..++||++
T Consensus 260 ~~L~p---gG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 332 (334)
T 2ip2_A 260 EAMAG---DGRVVVIERTISASEPS----PMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAA 332 (334)
T ss_dssp HHSCT---TCEEEEEECCBCSSSCC----HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEE
T ss_pred HhcCC---CCEEEEEEeccCCCCCc----chhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEE
Confidence 99999 99999999988765432 124567888876678999999999999999999999999998889999998
Q ss_pred C
Q 043533 301 P 301 (301)
Q Consensus 301 ~ 301 (301)
|
T Consensus 333 ~ 333 (334)
T 2ip2_A 333 R 333 (334)
T ss_dssp E
T ss_pred e
Confidence 6
No 8
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=8.6e-42 Score=314.74 Aligned_cols=286 Identities=47% Similarity=0.781 Sum_probs=243.2
Q ss_pred HHHHHHhHHhcC--CCCCHHHHHHhcCCCCC---Cce----------e--ec-----C-----CCeEEcChhcchhhcCC
Q 043533 14 QGQAQLYKLIHG--RAITLSELVSALDIQPT---KTT----------V--NG-----Q-----EEAYGLTAASTLLIKDK 66 (301)
Q Consensus 14 ~~~l~lF~~L~~--~p~t~~elA~~~~~~~~---~l~----------v--e~-----~-----~~~y~~t~~s~~L~~~~ 66 (301)
+++||||++|.+ +|+|++|||+++++++. .++ + +. + +++|.+|+.+++|++++
T Consensus 30 a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~~g~~~~~y~~t~~s~~l~~~~ 109 (358)
T 1zg3_A 30 AMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK 109 (358)
T ss_dssp HHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEEECCSSSSCCCEEEEEECHHHHTTCTTS
T ss_pred HHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEecccccccCCCCCCEEeCCHHHHHHhCCC
Confidence 369999999975 49999999999999643 444 1 33 2 47999999999999998
Q ss_pred CCChhhhhhhhcCccchhhHHHHHhhhcCCC-CchhHHhhCCChhHHhhcCchHHH--HHHHHhhcccccchHHHHHhhh
Q 043533 67 PYCLSPTVSVFVDPFFVAPFQSLSSWFKGTE-LTLWETVHGIKFWEFMNQNPAINQ--RFNEAMASDSEIMTSFVVKSEC 143 (301)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~L~~~l~~g~-~~~~~~~~g~~~~e~~~~~~~~~~--~f~~am~~~~~~~~~~~~~~~~ 143 (301)
|.++++++.+..++.+++.|.+|++++++|. .++|+.++|.++|+|+.++|+..+ .|+++|...+.... .++ +.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~-~~~ 187 (358)
T 1zg3_A 110 PTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVL-QEN 187 (358)
T ss_dssp TTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHH-HHT
T ss_pred CccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHH-Hhc
Confidence 8899999988765667899999999999983 278999999999999999999999 99999998776655 788 888
Q ss_pred hhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH----------
Q 043533 144 KQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPPANAFLF---------- 213 (301)
Q Consensus 144 ~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~---------- 213 (301)
++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.||+|++
T Consensus 188 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~ 267 (358)
T 1zg3_A 188 KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDE 267 (358)
T ss_dssp HHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHH
T ss_pred chhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHH
Confidence 3337788999999999999999999999999999999999999998767799999999988888998887
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
++|++++++|+|.++||+++|+|...++....+........+|+.|+...+|+.||.+||+++|+++||+.+++.++
T Consensus 268 ~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 347 (358)
T 1zg3_A 268 QSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPI 347 (358)
T ss_dssp HHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEec
Confidence 89999999999711158999999998876543211123456888887767899999999999999999999999998
Q ss_pred CCceeEEEEeC
Q 043533 291 FGMKSLIEVYP 301 (301)
Q Consensus 291 ~~~~~~i~a~~ 301 (301)
++..++||++|
T Consensus 348 ~~~~~vie~~~ 358 (358)
T 1zg3_A 348 SGFKSLIEVYP 358 (358)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEEeC
Confidence 88889999987
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=3.3e-41 Score=310.11 Aligned_cols=284 Identities=43% Similarity=0.804 Sum_probs=241.5
Q ss_pred HHHHHHhHHhcC--CCCCHHHHHHhcCCC---CCCce----------e--ec--CCCeEEcChhcchhhcCCCCChhhhh
Q 043533 14 QGQAQLYKLIHG--RAITLSELVSALDIQ---PTKTT----------V--NG--QEEAYGLTAASTLLIKDKPYCLSPTV 74 (301)
Q Consensus 14 ~~~l~lF~~L~~--~p~t~~elA~~~~~~---~~~l~----------v--e~--~~~~y~~t~~s~~L~~~~~~~l~~~~ 74 (301)
+++||||++|.+ +|+|++|||++++++ ++.++ + +. ++++|.+|+.+++|++++|.++++++
T Consensus 36 a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~y~~t~~s~~L~~~~~~~~~~~~ 115 (352)
T 1fp2_A 36 AVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMV 115 (352)
T ss_dssp HHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEEESSSEEEEECHHHHTTSTTSSSCCHHHH
T ss_pred HHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCCeEEEecCCCCeEeCCHHHHHHhCCCCccHHHHH
Confidence 369999999975 599999999999996 43444 1 33 36899999999999999888999999
Q ss_pred hhhcCccchhhHHHHHhhhc-CCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeE
Q 043533 75 SVFVDPFFVAPFQSLSSWFK-GTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSL 153 (301)
Q Consensus 75 ~~~~~~~~~~~~~~L~~~l~-~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~v 153 (301)
.+..++.+++.|.+|+++++ +|+ ++|+.++|.++|+|+.++|+..+.|.++|...+....+. + +.+++.+++..+|
T Consensus 116 ~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~-~~~~~~~~~~~~v 192 (352)
T 1fp2_A 116 ECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-L-RDCDFVFDGLESI 192 (352)
T ss_dssp HHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-H-HTCHHHHTTCSEE
T ss_pred HHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHHHHHhcchhhhhH-H-HhcccccccCceE
Confidence 88755567899999999999 776 789999999999999999999999999999887766666 7 7773337788999
Q ss_pred EEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH-------------HHHHHHH
Q 043533 154 VDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPPANAFLF-------------KILKKRR 220 (301)
Q Consensus 154 lDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~-------------~iL~~~~ 220 (301)
||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.||+|++ ++|++++
T Consensus 193 lDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~ 272 (352)
T 1fp2_A 193 VDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCK 272 (352)
T ss_dssp EEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHH
T ss_pred EEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998767799999999888888998887 8999999
Q ss_pred HhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEe
Q 043533 221 EAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 221 ~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~ 300 (301)
++|+|.++||+++|.|...++....+.+......+|+.|+. .+|+.||.+||+++|+++||+.+++.+.++..++||++
T Consensus 273 ~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~ 351 (352)
T 1fp2_A 273 EAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIY 351 (352)
T ss_dssp HHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-GTCCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred HhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-ccCCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEe
Confidence 99998112699999999888765432111223567887776 56889999999999999999999999988888999998
Q ss_pred C
Q 043533 301 P 301 (301)
Q Consensus 301 ~ 301 (301)
|
T Consensus 352 ~ 352 (352)
T 1fp2_A 352 P 352 (352)
T ss_dssp C
T ss_pred C
Confidence 7
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=3.9e-41 Score=311.91 Aligned_cols=281 Identities=27% Similarity=0.470 Sum_probs=226.5
Q ss_pred HHHHHhHHhcC-C-C---CCHHHHHHhcCC---C---CCCce----------e--ec----C----CCeEEcChhcchhh
Q 043533 15 GQAQLYKLIHG-R-A---ITLSELVSALDI---Q---PTKTT----------V--NG----Q----EEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~~-~-p---~t~~elA~~~~~---~---~~~l~----------v--e~----~----~~~y~~t~~s~~L~ 63 (301)
++||||++|.+ + | +|++|||+++++ + ++.++ + +. . +++|.+|+.+++|+
T Consensus 45 ~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~L~ 124 (372)
T 1fp1_D 45 IDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLV 124 (372)
T ss_dssp HHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEEEECTTGGGGS
T ss_pred HHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhCCceEecccccCCCCcCCeEecCHHHHHHh
Confidence 69999999986 5 7 999999999999 4 44444 1 33 2 35999999999999
Q ss_pred cCCC-CChhhhhhhhcCccchhhHHHHHhhhcCC-CCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHh
Q 043533 64 KDKP-YCLSPTVSVFVDPFFVAPFQSLSSWFKGT-ELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKS 141 (301)
Q Consensus 64 ~~~~-~~l~~~~~~~~~~~~~~~~~~L~~~l~~g-~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~ 141 (301)
+++| .++++++.+..++.+++.|.+|++++++| . ++|+..+|.++|+|+.++|+..+.|+++|...+....+.++ +
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~-~ 202 (372)
T 1fp1_D 125 PDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI-DLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRML-E 202 (372)
T ss_dssp TTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC---------------CCSSCHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCC-ChhHHHhCCCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHH-H
Confidence 9887 78999998875556789999999999998 5 77988899999999999999999999999988776677788 7
Q ss_pred hhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH--------
Q 043533 142 ECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPPANAFLF-------- 213 (301)
Q Consensus 142 ~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~-------- 213 (301)
.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.+|+|++
T Consensus 203 ~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 203 IYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWS 281 (372)
T ss_dssp HCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSC
T ss_pred Hhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCC
Confidence 774 36778899999999999999999999999999999999999998878899999999988888998887
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEE
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKIT 288 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 288 (301)
++|++++++|+| ||+++|.|...++....+........+|+.|+...+|+.||.+||+++|+++||+.+++.
T Consensus 282 d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp HHHHHHHHHHHHHHEEE---EEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 899999999999 999999999888765432000123567777776567889999999999999999999998
Q ss_pred ec-CCceeEEEEeC
Q 043533 289 PI-FGMKSLIEVYP 301 (301)
Q Consensus 289 ~~-~~~~~~i~a~~ 301 (301)
++ ++..++||++|
T Consensus 359 ~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 359 CRAFNSLGVMEFYK 372 (372)
T ss_dssp EEETTTEEEEEEEC
T ss_pred EcCCCCeEEEEEeC
Confidence 84 55259999987
No 11
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=1.3e-39 Score=301.45 Aligned_cols=277 Identities=21% Similarity=0.285 Sum_probs=235.9
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e--ecCCC--eEEcChhcchhhcCCCCChhhhhhhhcC
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V--NGQEE--AYGLTAASTLLIKDKPYCLSPTVSVFVD 79 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v--e~~~~--~y~~t~~s~~L~~~~~~~l~~~~~~~~~ 79 (301)
+++||||++|.++|+|++|||+++|++++.++ + +..++ .|.+|+.+++|+++++.+++.++.+..+
T Consensus 36 ~~~l~i~~~l~~~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~ 115 (374)
T 1qzz_A 36 AATLRLVDHLLAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGEKQGRPLRPTRLGMLLADGHPAQQRAWLDLNGA 115 (374)
T ss_dssp HHHTTHHHHHHTTCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCCC-CCCCEECTTGGGGSTTCTTCHHHHHCTTSH
T ss_pred HHHcChHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeCCCCeEEEEChHHHhhcCCCcccHHHHHHHcCC
Confidence 36999999998899999999999999998887 1 33567 9999999999999988899999887643
Q ss_pred ccch-hhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecC
Q 043533 80 PFFV-APFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGG 158 (301)
Q Consensus 80 ~~~~-~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGg 158 (301)
...+ ..|.+|.+.+++|+ ++|+..+|.++|+++..+|+..+.|.++|...+....+.++ +.++ +.+..+||||||
T Consensus 116 ~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~-~~~~--~~~~~~vlDvG~ 191 (374)
T 1qzz_A 116 VSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPA-DAYD--WSAVRHVLDVGG 191 (374)
T ss_dssp HHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHH-HTSC--CTTCCEEEEETC
T ss_pred hhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHH-HhCC--CCCCCEEEEECC
Confidence 3456 88999999999998 66888899999999999999999999999988777778888 8887 777899999999
Q ss_pred CccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCc-chhHHH-------------HHHH
Q 043533 159 GNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRFIPP-ANAFLF-------------KILK 217 (301)
Q Consensus 159 G~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~~p~-~D~i~~-------------~iL~ 217 (301)
|+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++|. ||+|++ ++|+
T Consensus 192 G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~ 271 (374)
T 1qzz_A 192 GNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILR 271 (374)
T ss_dssp TTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHH
Confidence 99999999999999999999999989888764 35899999999887887 999876 7999
Q ss_pred HHHHhcccCCCCcEEEEEee--eeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCce-
Q 043533 218 KRREAIASNGERGKVIIIDI--VINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMK- 294 (301)
Q Consensus 218 ~~~~aL~p~~~gg~l~i~e~--~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~- 294 (301)
+++++|+| ||+++|.|. ..++.... .....+++.|+...+|+.++.++|.++|+++||+++++..+++..
T Consensus 272 ~~~~~L~p---gG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~ 344 (374)
T 1qzz_A 272 GCVRALEP---GGRLLVLDRADVEGDGADR----FFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTL 344 (374)
T ss_dssp HHHHHEEE---EEEEEEEECCH-------H----HHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSC
T ss_pred HHHHhcCC---CcEEEEEechhhcCCCCCc----chhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcc
Confidence 99999999 999999998 76654322 123467777776678899999999999999999999999887766
Q ss_pred ----eEEEEeC
Q 043533 295 ----SLIEVYP 301 (301)
Q Consensus 295 ----~~i~a~~ 301 (301)
++|++++
T Consensus 345 ~~~~~~i~~~~ 355 (374)
T 1qzz_A 345 PFDFSILEFTA 355 (374)
T ss_dssp SSCEEEEEEEE
T ss_pred cCCcEEEEEEE
Confidence 9999874
No 12
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=1.5e-39 Score=299.58 Aligned_cols=276 Identities=21% Similarity=0.330 Sum_probs=239.1
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce-----------e-ecCCCeEEcChhcchhhcCCCCChhhhhhhhcCcc-
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT-----------V-NGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPF- 81 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~-----------v-e~~~~~y~~t~~s~~L~~~~~~~l~~~~~~~~~~~- 81 (301)
++|+||++|.++|.|++|||+++++++..+. + +..+|+|.+|+.+++|++++|.+++.++.+..++.
T Consensus 40 ~~l~i~~~l~~~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~~g~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~ 119 (360)
T 1tw3_A 40 ATLRLVDHILAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGELLADDHPAAQRAWHDLTQAVAR 119 (360)
T ss_dssp HHTTHHHHHHTTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEETTEEEECTTGGGGSTTSTTCHHHHTCTTSHHHH
T ss_pred HHhCHHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecCCCeEEeCHHHHHHhcCCchhHHHHHHHhcCchh
Confidence 6999999999899999999999999998887 1 44678999999999999999899999988764333
Q ss_pred chhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCcc
Q 043533 82 FVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNV 161 (301)
Q Consensus 82 ~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G 161 (301)
.+..|.+|.+.+++|+ ++++..+|.++|+++..+|+....|..+|...+....+.++ +.++ +.+..+|||||||+|
T Consensus 120 ~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~-~~~~--~~~~~~vLDvG~G~G 195 (360)
T 1tw3_A 120 ADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPA-AAYD--WTNVRHVLDVGGGKG 195 (360)
T ss_dssp HGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHH-HHSC--CTTCSEEEEETCTTS
T ss_pred HHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHH-HhCC--CccCcEEEEeCCcCc
Confidence 5789999999999998 56888899999999999999999999999988877778888 8887 777889999999999
Q ss_pred HHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCc-chhHHH-------------HHHHHHH
Q 043533 162 SFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRFIPP-ANAFLF-------------KILKKRR 220 (301)
Q Consensus 162 ~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~~p~-~D~i~~-------------~iL~~~~ 220 (301)
.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++|. ||+|++ ++|++++
T Consensus 196 ~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~ 275 (360)
T 1tw3_A 196 GFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCA 275 (360)
T ss_dssp HHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHHH
Confidence 99999999999999999999888887764 35899999999987887 998876 7999999
Q ss_pred HhcccCCCCcEEEEEeee-eCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCc-----e
Q 043533 221 EAIASNGERGKVIIIDIV-INAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGM-----K 294 (301)
Q Consensus 221 ~aL~p~~~gg~l~i~e~~-~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~-----~ 294 (301)
++|+| ||+++|.|.. .++..... ....+|+.|+...+++.++.++|+++|+++||+++++..+++. .
T Consensus 276 ~~L~p---gG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~ 348 (360)
T 1tw3_A 276 EALEP---GGRILIHERDDLHENSFNE----QFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDL 348 (360)
T ss_dssp HTEEE---EEEEEEEECCBCGGGCCSH----HHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEE
T ss_pred HhcCC---CcEEEEEEEeccCCCCCcc----hhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCcc
Confidence 99999 9999999988 66543221 2345777777666889999999999999999999999888654 7
Q ss_pred eEEEEeC
Q 043533 295 SLIEVYP 301 (301)
Q Consensus 295 ~~i~a~~ 301 (301)
++|+++|
T Consensus 349 ~~i~~~~ 355 (360)
T 1tw3_A 349 SLLVLAP 355 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8999975
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=4.2e-39 Score=297.35 Aligned_cols=275 Identities=17% Similarity=0.195 Sum_probs=221.7
Q ss_pred HHHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce----------e-ecCCCeEEcChhcchhhcCCCCChhhhhhhhcCc
Q 043533 14 QGQAQLYKLIHG--RAITLSELVSALDIQPTKTT----------V-NGQEEAYGLTAASTLLIKDKPYCLSPTVSVFVDP 80 (301)
Q Consensus 14 ~~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~----------v-e~~~~~y~~t~~s~~L~~~~~~~l~~~~~~~~~~ 80 (301)
+++||||++|.+ +|+|++|||+++|++++.++ + ++++++|++|+.+++|+++++.+ .++.+. ..
T Consensus 35 a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l~~~~~~y~~t~~s~~L~~~~~~~--~~~~~~-~~ 111 (363)
T 3dp7_A 35 MLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTILLEEDRYVLAKAGWFLLNDKMAR--VNMEFN-HD 111 (363)
T ss_dssp HHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEETTEEEECHHHHHHHHCHHHH--HHHHHH-HH
T ss_pred HHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCeEecCCEEecccchHHhhCCCccc--chheee-cH
Confidence 479999999987 89999999999999999988 1 55689999999999999887433 234433 35
Q ss_pred cchhhHHHHHhhhcCCCCchhHHhhC--CChhHHhhcCchHHH----HHHHHhhcccccchHHHHHhhhhhcccCCCeEE
Q 043533 81 FFVAPFQSLSSWFKGTELTLWETVHG--IKFWEFMNQNPAINQ----RFNEAMASDSEIMTSFVVKSECKQIFEGLGSLV 154 (301)
Q Consensus 81 ~~~~~~~~L~~~l~~g~~~~~~~~~g--~~~~e~~~~~~~~~~----~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vl 154 (301)
..++.|.+|++++++|+ +++...+| .++|+++.++|+..+ .|..+|...+ ...++ +.+. ..+..+||
T Consensus 112 ~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~l-~~~~--~~~~~~vl 184 (363)
T 3dp7_A 112 VNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQS---FGKAL-EIVF--SHHPKRLL 184 (363)
T ss_dssp TTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTTCCC---CHHHH-HHHG--GGCCSEEE
T ss_pred HhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhhhhh---HHHHH-HHhc--ccCCCEEE
Confidence 67899999999999998 55777788 689999999998766 4777776543 23456 5544 35678999
Q ss_pred EecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCC---CCc-chhHHH----------
Q 043533 155 DVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLRF---IPP-ANAFLF---------- 213 (301)
Q Consensus 155 DvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~~---~p~-~D~i~~---------- 213 (301)
|||||+|.++..+++++|+++++++|+|++++.+++ .+||+++.+|++++ +|. ||+|++
T Consensus 185 DvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~ 264 (363)
T 3dp7_A 185 DIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEE 264 (363)
T ss_dssp EESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHH
T ss_pred EeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHH
Confidence 999999999999999999999999999999988774 26899999999984 675 999887
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchh-hhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEe
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHE-LTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITP 289 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~-~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 289 (301)
++|++++++|+| ||+|+|+|...++....+. +.......++.|+...+++.||.+||+++|+++||+++++.+
T Consensus 265 ~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~ 341 (363)
T 3dp7_A 265 EVISILTRVAQSIGK---DSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQD 341 (363)
T ss_dssp HHHHHHHHHHHHCCT---TCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCC
T ss_pred HHHHHHHHHHHhcCC---CcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEe
Confidence 889999999999 9999999998887654321 000112334445555678899999999999999999999987
Q ss_pred cCC-ceeEEEEeC
Q 043533 290 IFG-MKSLIEVYP 301 (301)
Q Consensus 290 ~~~-~~~~i~a~~ 301 (301)
..+ ..++|+++|
T Consensus 342 ~~g~~~svi~~~~ 354 (363)
T 3dp7_A 342 NIGLGHSILQCRL 354 (363)
T ss_dssp CBTTTBEEEEEEE
T ss_pred CCCCCceEEEEee
Confidence 754 589999875
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=9e-38 Score=284.70 Aligned_cols=273 Identities=18% Similarity=0.236 Sum_probs=232.4
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e-ecCCCeEEcChhc-chhhcCCCCChhhhhhhhcCcc
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V-NGQEEAYGLTAAS-TLLIKDKPYCLSPTVSVFVDPF 81 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v-e~~~~~y~~t~~s-~~L~~~~~~~l~~~~~~~~~~~ 81 (301)
+++||||++|.++|+|++|||+++|++++.++ + ++++++|.+|+.+ ++|++++|.++++++.+..++.
T Consensus 26 ~~~l~i~~~l~~~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~ 105 (335)
T 2r3s_A 26 AVELNVFTAISQGIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQAEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPM 105 (335)
T ss_dssp HHHTTHHHHHTTSEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHH
T ss_pred HHHcChHHHHhcCCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEecCCEEecCHHHHHHhccCCcHHHHHHHHHhcchh
Confidence 36999999999899999999999999998887 1 5578999999999 5899998889999998875446
Q ss_pred chhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCcc
Q 043533 82 FVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNV 161 (301)
Q Consensus 82 ~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G 161 (301)
.++.|.+|++++++|. ++|+ + |+++.++++....|...|..........++ +.+++.+.+..+|||||||+|
T Consensus 106 ~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vlDvG~G~G 177 (335)
T 2r3s_A 106 ITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIA-QLVNENKIEPLKVLDISASHG 177 (335)
T ss_dssp HHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHH-HHHTC--CCCSEEEEETCTTC
T ss_pred hHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHH-HhcccccCCCCEEEEECCCcC
Confidence 7899999999999987 4453 3 888888999999999999988776677788 888721177889999999999
Q ss_pred HHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH-------------HHHHHH
Q 043533 162 SFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF-------------KILKKR 219 (301)
Q Consensus 162 ~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~-------------~iL~~~ 219 (301)
.++..+++++|+.+++++|++.+++.+++ .+||+++.+|+++ ++|. ||+|++ ++|+++
T Consensus 178 ~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~ 257 (335)
T 2r3s_A 178 LFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKI 257 (335)
T ss_dssp HHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhccCCHHHHHHHHHHH
Confidence 99999999999999999999988887764 3579999999998 6776 998887 899999
Q ss_pred HHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcccc-CCccCCHHHHHHHHHhCCCceeEEEecCCceeEEE
Q 043533 220 REAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNA-TGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIE 298 (301)
Q Consensus 220 ~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~ 298 (301)
+++|+| ||+++|+|...++....+ .....+++.|+... +++.++.++|+++++++||+.+++.++.+..++|+
T Consensus 258 ~~~L~p---gG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~ 331 (335)
T 2r3s_A 258 KTALAV---EGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVI 331 (335)
T ss_dssp HHHEEE---EEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEE
T ss_pred HHhCCC---CcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCceeEE
Confidence 999999 999999999887654332 12456777777665 78899999999999999999999999887778777
Q ss_pred Ee
Q 043533 299 VY 300 (301)
Q Consensus 299 a~ 300 (301)
++
T Consensus 332 ~~ 333 (335)
T 2r3s_A 332 VA 333 (335)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=3.9e-37 Score=282.66 Aligned_cols=266 Identities=16% Similarity=0.230 Sum_probs=221.0
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e-ecCCCeEEcChhcc-hhhcCCCCChhhhhhhhcCccc
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V-NGQEEAYGLTAAST-LLIKDKPYCLSPTVSVFVDPFF 82 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v-e~~~~~y~~t~~s~-~L~~~~~~~l~~~~~~~~~~~~ 82 (301)
++||||++|.+ |+|++|||+++|++++.++ + ++.+++|.+|+.++ +|.+++|.+++.++.+. ...
T Consensus 45 ~~lgif~~l~~-~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~ 121 (352)
T 3mcz_A 45 VADKLFDLTQT-GRTPAEVAASFGMVEGKAAILLHALAALGLLTKEGDAFRNTALTERYLTTTSADYIGPIVEHQ--YLQ 121 (352)
T ss_dssp HHTTHHHHTTS-CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHSTTCTTCCHHHHHHH--HTT
T ss_pred HHCChHHHhCC-CCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEecCCeeecCHHHHhhccCCChhhHHHHHHHh--HHH
Confidence 69999999986 9999999999999999987 1 45568999999998 78888888999888765 356
Q ss_pred hhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccC-CCeEEEecCCcc
Q 043533 83 VAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEG-LGSLVDVGGGNV 161 (301)
Q Consensus 83 ~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~-~~~vlDvGgG~G 161 (301)
++.|.+|++++++|.+..|+.. .++..+|+..+.|..+|...... ...++ +.++ +.+ ..+|||||||+|
T Consensus 122 ~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~~~~-~~~~l-~~~~--~~~~~~~vlDvG~G~G 191 (352)
T 3mcz_A 122 WDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRLSQP-MVDVV-SELG--VFARARTVIDLAGGHG 191 (352)
T ss_dssp TTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHHHHH-HHHHH-HTCG--GGTTCCEEEEETCTTC
T ss_pred HHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhhhhh-HHHHH-HhCC--CcCCCCEEEEeCCCcC
Confidence 8999999999999986544322 23457899999999999873222 23678 8887 666 899999999999
Q ss_pred HHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-C--CCc-chhHHH-------------HHHH
Q 043533 162 SFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-F--IPP-ANAFLF-------------KILK 217 (301)
Q Consensus 162 ~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~--~p~-~D~i~~-------------~iL~ 217 (301)
.++..+++++|+++++++|+|++++.+++ .+||+++.+|+++ + .|. ||+|++ ++|+
T Consensus 192 ~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~ 271 (352)
T 3mcz_A 192 TYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIG 271 (352)
T ss_dssp HHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHH
Confidence 99999999999999999999988887764 3689999999998 4 566 999887 8999
Q ss_pred HHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccc-cCCccCCHHHHHHHHHhCCCceeEEEecCCceeE
Q 043533 218 KRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKERTESEWAKLFFDAVFSHYKITPIFGMKSL 296 (301)
Q Consensus 218 ~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ 296 (301)
+++++|+| ||+++|+|...++....+ .....+|+.|+.. .+|+.||.++|+++|+++||++++.. .+...+
T Consensus 272 ~~~~~L~p---gG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l 343 (352)
T 3mcz_A 272 HAAGLVKP---GGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTL 343 (352)
T ss_dssp HHHHTEEE---EEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEE
T ss_pred HHHHHcCC---CCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec--cCceEE
Confidence 99999999 999999999988775543 2245788888765 47889999999999999999999843 355888
Q ss_pred EEEeC
Q 043533 297 IEVYP 301 (301)
Q Consensus 297 i~a~~ 301 (301)
++++|
T Consensus 344 ~~a~k 348 (352)
T 3mcz_A 344 LIGQR 348 (352)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88875
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=8.5e-37 Score=281.40 Aligned_cols=262 Identities=20% Similarity=0.340 Sum_probs=221.7
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce----------e-ecCCCeEEcChhc-chhhcCCC---CChhhhhhhhcC
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT----------V-NGQEEAYGLTAAS-TLLIKDKP---YCLSPTVSVFVD 79 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~----------v-e~~~~~y~~t~~s-~~L~~~~~---~~l~~~~~~~~~ 79 (301)
++||||+.|.++|+|++|||+++|++++.++ + ++.+++|.+|+.+ ++|++++| .++++++.+. .
T Consensus 52 ~~lgif~~L~~~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~ 130 (359)
T 1x19_A 52 IELDLFSHMAEGPKDLATLAADTGSVPPRLEMLLETLRQMRVINLEDGKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-A 130 (359)
T ss_dssp HHHTHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-H
T ss_pred HHcCcHHHHcCCCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEeeCCeEecCHHHHHHhcCCCCCccccHHHHHHHH-H
Confidence 6999999999899999999999999999887 1 4456799999975 48999888 7899988876 3
Q ss_pred ccchhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCch---HHHHHHHHhhcccc-cchHHHHHhhhhhcccCCCeEEE
Q 043533 80 PFFVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPA---INQRFNEAMASDSE-IMTSFVVKSECKQIFEGLGSLVD 155 (301)
Q Consensus 80 ~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~---~~~~f~~am~~~~~-~~~~~~~~~~~~~~~~~~~~vlD 155 (301)
...++.|.+|++++++|.+ |+|+..+|+ ..+.|..+|...+. ...+.++ +.++ +.+..+|||
T Consensus 131 ~~~~~~~~~L~~~l~~g~~-----------~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~-~~~~--~~~~~~vLD 196 (359)
T 1x19_A 131 FLADDFYMGLSQAVRGQKN-----------FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLL-EEAK--LDGVKKMID 196 (359)
T ss_dssp HHHHHTGGGHHHHHTTSCC-----------CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHH-HHCC--CTTCCEEEE
T ss_pred HHHHHHHHHHHHHHhcCCC-----------CcccccCchhhHHHHHHHHHHHHhccchhHHHHH-HhcC--CCCCCEEEE
Confidence 5678999999999999863 567778888 99999999999887 7778888 8887 778899999
Q ss_pred ecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCcchhHHH-------------H
Q 043533 156 VGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPPANAFLF-------------K 214 (301)
Q Consensus 156 vGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~~D~i~~-------------~ 214 (301)
||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++ ++|.+|+|++ +
T Consensus 197 vG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~ 276 (359)
T 1x19_A 197 VGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTI 276 (359)
T ss_dssp ESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHH
T ss_pred ECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHH
Confidence 99999999999999999999999999999888763 4679999999998 6766788876 8
Q ss_pred HHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccc-cCCcc----CCHHHHHHHHHhCCCceeEEEe
Q 043533 215 ILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN-ATGKE----RTESEWAKLFFDAVFSHYKITP 289 (301)
Q Consensus 215 iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~g~~----rt~~e~~~ll~~aGf~~~~~~~ 289 (301)
+|++++++|+| ||+++|+|...++. ..+ .....+ .|+.. .+|++ ++.++|+++|+++||+.+++.+
T Consensus 277 ~l~~~~~~L~p---gG~l~i~e~~~~~~-~~~---~~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 277 MCKKAFDAMRS---GGRLLILDMVIDDP-ENP---NFDYLS--HYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp HHHHHHTTCCT---TCEEEEEEECCCCT-TSC---CHHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhcCC---CCEEEEEecccCCC-CCc---hHHHHH--HHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 89999999999 99999999988765 222 112223 44433 34667 9999999999999999999998
Q ss_pred cCCceeEEEEeC
Q 043533 290 IFGMKSLIEVYP 301 (301)
Q Consensus 290 ~~~~~~~i~a~~ 301 (301)
++ ..++|+++|
T Consensus 348 ~~-~~~vi~a~k 358 (359)
T 1x19_A 348 KY-DHLLVQAVK 358 (359)
T ss_dssp ET-TEEEEEEEC
T ss_pred cC-CceEEEEeC
Confidence 87 789999986
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.77 E-value=1.7e-18 Score=152.36 Aligned_cols=151 Identities=13% Similarity=0.102 Sum_probs=109.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCcchhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF--PGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPPANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~--P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~~D~i~~-- 213 (301)
.++..+|||||||+|.++..|++++ |+++++++|+ +.|++.|++ ..+|+++.+|+.+ +++.+|+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 4667899999999999999999985 6889999999 999988864 4689999999987 7777888776
Q ss_pred -----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhc---c-----------ccCCccC
Q 043533 214 -----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMS---V-----------NATGKER 268 (301)
Q Consensus 214 -----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~---~-----------~~~g~~r 268 (301)
.+|++++++|+| ||++++.|...+.+........ ....++... . ..--...
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp---GG~lii~e~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP---GGALVLSEKFSFEDAKVGELLF-NMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCSSHHHHHHHH-HHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcCC---CcEEEEEeccCCCCHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 689999999999 9999999988776543221100 000110000 0 0001346
Q ss_pred CHHHHHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 269 TESEWAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 269 t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
|.+++.++|++|||+.++++.-.....-+.|+|
T Consensus 224 s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 899999999999999998764333233344654
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.70 E-value=7e-17 Score=138.91 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=111.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc-chhHHH-------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP-ANAFLF------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~-~D~i~~------- 213 (301)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. ||+|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 4568999999999999999999999999999999 888877664 3489999999987 5555 999887
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhh------c-----hhh-cc-ccCCccCCHHHHH
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLF------D-----IVM-SV-NATGKERTESEWA 274 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~------d-----~~~-~~-~~~g~~rt~~e~~ 274 (301)
.+|++++++|+| ||.+++.+...+.......... .... . +.. +. ......++.+++.
T Consensus 123 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKE---SGIFINADLVHGETAFIENLNK-TIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHH-HHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCChhhhhHHH-HHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 489999999999 9999999987765432210000 0000 0 000 00 0223457899999
Q ss_pred HHHHhCCCceeEEEecCCceeEEEEe
Q 043533 275 KLFFDAVFSHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 275 ~ll~~aGf~~~~~~~~~~~~~~i~a~ 300 (301)
++|++|||+.+++.......+++..+
T Consensus 199 ~ll~~aGF~~v~~~~~~~~~~~~~~~ 224 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYYQFAVMFGR 224 (234)
T ss_dssp HHHHHTTCEEEEEEEEETTEEEEEEE
T ss_pred HHHHHcCCCceeeeeeecceeEEEEE
Confidence 99999999999998776556666554
No 19
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=2.2e-17 Score=141.06 Aligned_cols=147 Identities=14% Similarity=0.157 Sum_probs=105.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc--chhHHH-----
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP--ANAFLF----- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~--~D~i~~----- 213 (301)
....+|||||||+|.++..+++.+| +++++|+ +.+++.+++ ..+++++.+|+.+ +++. +|+|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 3468999999999999999999987 8999999 888888765 3789999999987 6653 898775
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhh---hhhhhchhhccccC------------------
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTE---TKFLFDIVMSVNAT------------------ 264 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~---~~~~~d~~~~~~~~------------------ 264 (301)
.+|++++++|+| ||.+++.+...+...... ... ....+...++....
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKP---SGKFIMYFTDLRELLPRL-KESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVR 190 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEE---EEEEEEEEECHHHHGGGC-CC---------CCEEEEETTTTEEEEEC-----CCEEE
T ss_pred hCCHHHHHHHHHHHHHHcCC---CcEEEEEecChHHHHHHH-HhhhhcccceeecccccCccccEEEEEeccchhhheee
Confidence 899999999999 899988876432211100 000 00000000000000
Q ss_pred CccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 265 GKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 265 g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
...++ .+|.++|+++||+.+++..+.....+|+.+|
T Consensus 191 ~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 191 FNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 11122 4899999999999999999977788999876
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=4.3e-16 Score=132.52 Aligned_cols=145 Identities=15% Similarity=0.119 Sum_probs=116.0
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI 205 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~ 205 (301)
...++ +.++ .....+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 26 ~~~~~-~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 102 (219)
T 3dh0_A 26 PEKVL-KEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL 102 (219)
T ss_dssp HHHHH-HHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS
T ss_pred HHHHH-HHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC
Confidence 34566 6666 6777899999999999999999996 8899999999 888887764 2589999999987 66
Q ss_pred Cc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHH
Q 043533 206 PP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 272 (301)
Q Consensus 206 p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e 272 (301)
+. ||+|++ .+|++++++|+| ||.+++.+.........+ .....++.++
T Consensus 103 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~ 163 (219)
T 3dh0_A 103 PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKP---FAYLAIIDWKKEERDKGP----------------PPEEVYSEWE 163 (219)
T ss_dssp CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEE---EEEEEEEEECSSCCSSSC----------------CGGGSCCHHH
T ss_pred CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCC---CeEEEEEEecccccccCC----------------chhcccCHHH
Confidence 54 999887 899999999999 899999886554432211 0011358999
Q ss_pred HHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 273 WAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 273 ~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
|.++++++||+++++.........+.+++
T Consensus 164 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 99999999999999988877666666654
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.65 E-value=8e-17 Score=136.46 Aligned_cols=154 Identities=15% Similarity=0.119 Sum_probs=109.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p 206 (301)
..++ +.++ ..+. +|||||||+|.++..++++ |+.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 34 ~~~~-~~~~--~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 34 ENII-NRFG--ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHH-HHHC--CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHH-HhcC--CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 4445 5444 3433 9999999999999999999 8899999999 888887764 3589999999988 666
Q ss_pred c--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhh-hh-hhhchhhccccCCccCCHH
Q 043533 207 P--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTE-TK-FLFDIVMSVNATGKERTES 271 (301)
Q Consensus 207 ~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~-~~-~~~d~~~~~~~~g~~rt~~ 271 (301)
. ||+|++ .+|+++++.|+| ||.+++.+...+...... +.. .. ....+..........++.+
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKS---GGKTYIGGGFGNKELRDS-ISAEMIRKNPDWKEFNRKNISQENVE 184 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEECCSSHHHHHH-HHHHHHHHCTTHHHHHHHHSSHHHHH
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCC---CCEEEEEeccCcHHHHHH-HHHHHHHhHHHHHhhhhhccccCCHH
Confidence 4 999887 899999999999 899888875443321110 000 00 0001111101123345889
Q ss_pred HHHHHHHhCCCceeEEEecCCceeEEE
Q 043533 272 EWAKLFFDAVFSHYKITPIFGMKSLIE 298 (301)
Q Consensus 272 e~~~ll~~aGf~~~~~~~~~~~~~~i~ 298 (301)
+|.++|+++||+.+++........++.
T Consensus 185 ~~~~~l~~aGf~~v~~~~~~~~~~~~~ 211 (219)
T 3dlc_A 185 RFQNVLDEIGISSYEIILGDEGFWIII 211 (219)
T ss_dssp HHHHHHHHHTCSSEEEEEETTEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEecCCceEEEE
Confidence 999999999999999987765444443
No 22
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=9.3e-16 Score=134.88 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=110.8
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p 206 (301)
..++ +.++ .....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 51 ~~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 51 DEMI-ALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHH-HHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 4466 6665 6677899999999999999999987 689999999 888877764 3589999999987 666
Q ss_pred c--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHH
Q 043533 207 P--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW 273 (301)
Q Consensus 207 ~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~ 273 (301)
. ||+|++ .+|++++++|+| ||++++.+.......... ....++........+..++.++|
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 199 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRP---GGTVAIADFVLLAPVEGA----KKEAVDAFRAGGGVLSLGGIDEY 199 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEE---EEEEEEEEEEESSCCCHH----HHHHHHHHHHHHTCCCCCCHHHH
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCC---CeEEEEEEeeccCCCChh----HHHHHHHHHhhcCccCCCCHHHH
Confidence 4 999886 899999999999 999999998765433221 01111111111134557899999
Q ss_pred HHHHHhCCCceeEEEec
Q 043533 274 AKLFFDAVFSHYKITPI 290 (301)
Q Consensus 274 ~~ll~~aGf~~~~~~~~ 290 (301)
.++++++||+++++...
T Consensus 200 ~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 200 ESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHTTCEEEEEEEC
T ss_pred HHHHHHcCCeEEEEEEC
Confidence 99999999999988765
No 23
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.63 E-value=5.6e-16 Score=135.77 Aligned_cols=150 Identities=17% Similarity=0.103 Sum_probs=106.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc-chhHHH---------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP-ANAFLF--------- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~-~D~i~~--------- 213 (301)
.++..+|||||||+|.++..+++.+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. ||+|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 4556899999999999999999885 47999999 889888876 5689999999987 5555 887764
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchh------------hhh--------hhhhhchhhcccc-C--
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHE------------LTE--------TKFLFDIVMSVNA-T-- 264 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~------------~~~--------~~~~~d~~~~~~~-~-- 264 (301)
.+|++++++|+| ||.+++.+...+....... +.. ....+++.++... +
T Consensus 126 ~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLP---DGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG 202 (263)
T ss_dssp HHHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCc
Confidence 779999999999 8877775433332111000 000 0001122222111 1
Q ss_pred ---------CccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 265 ---------GKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 265 ---------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
.+.+|.+||.++|+++||+++++...++...+++++|
T Consensus 203 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 203 ITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 2356899999999999999999987777677777764
No 24
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.63 E-value=7.9e-16 Score=132.40 Aligned_cols=149 Identities=14% Similarity=0.112 Sum_probs=107.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc-chhHHH----------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP-ANAFLF---------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~-~D~i~~---------- 213 (301)
.+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++ .++++++.+|+.+ +.+. +|+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 4568999999999999999999976 8999999 889888875 4679999999987 5554 898882
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhh------------hh--------hhhhhchhhcccc-CC--
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDIVINAEEEEHEL------------TE--------TKFLFDIVMSVNA-TG-- 265 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~------------~~--------~~~~~d~~~~~~~-~g-- 265 (301)
.+|++++++|+| ||.+++.+...++....... .. ......+.++... ++
T Consensus 117 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEP---GGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGV 193 (239)
T ss_dssp HHHHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEE
T ss_pred HHHHHHHHHHHHHhcCC---CeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcc
Confidence 889999999999 88887766544432211000 00 0001112222111 11
Q ss_pred ---------ccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEeC
Q 043533 266 ---------KERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 266 ---------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~~ 301 (301)
+.+|.++|+++|+++||+++.+....+...+++|+|
T Consensus 194 ~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 194 RHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred eEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 357999999999999998777766666788888875
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=9.2e-16 Score=134.13 Aligned_cols=149 Identities=11% Similarity=0.214 Sum_probs=110.0
Q ss_pred hcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCC
Q 043533 128 ASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGD 200 (301)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D 200 (301)
...+......++ +.++ .....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ .++++++.+|
T Consensus 19 ~~~~~~~~~~l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 93 (260)
T 1vl5_A 19 IHAKGSDLAKLM-QIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD 93 (260)
T ss_dssp ----CCCHHHHH-HHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred cccCHHHHHHHH-HHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEec
Confidence 333334456677 7766 66788999999999999999999875 8999999 888887764 2679999999
Q ss_pred CCC-CCCc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhch-hhccc-cC
Q 043533 201 MLR-FIPP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI-VMSVN-AT 264 (301)
Q Consensus 201 ~~~-~~p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~-~~~~~-~~ 264 (301)
+.+ ++++ ||+|++ .+|++++++|+| ||++++.+...+...... ..+.. ..+.. ..
T Consensus 94 ~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 164 (260)
T 1vl5_A 94 AEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKK---GGQLLLVDNSAPENDAFD------VFYNYVEKERDYSH 164 (260)
T ss_dssp C-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEEEBCSSHHHH------HHHHHHHHHHCTTC
T ss_pred HHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCC---CCEEEEEEcCCCCCHHHH------HHHHHHHHhcCccc
Confidence 987 7764 999887 899999999999 899999888766542211 11111 11111 12
Q ss_pred CccCCHHHHHHHHHhCCCceeEEEec
Q 043533 265 GKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 265 g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
...++.++|.++|+++||+++.+...
T Consensus 165 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 165 HRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 34678999999999999998877654
No 26
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.62 E-value=2.1e-15 Score=135.62 Aligned_cols=152 Identities=13% Similarity=0.112 Sum_probs=112.0
Q ss_pred hhcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEe
Q 043533 127 MASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIA 198 (301)
Q Consensus 127 m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~ 198 (301)
+..........++ +.++ .+....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.
T Consensus 97 ~~~~~~~~~~~l~-~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 97 LHRLESAQAEFLM-DHLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV 173 (312)
T ss_dssp HHHHHHHHHHHHH-TTSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred hhhHHHHHHHHHH-HHhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 3333333334456 5554 25567899999999999999999986 679999999 888887764 36899999
Q ss_pred CCCCC-CCCc--chhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCC
Q 043533 199 GDMLR-FIPP--ANAFLF----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATG 265 (301)
Q Consensus 199 ~D~~~-~~p~--~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g 265 (301)
+|+.+ +++. ||+|++ .+|++++++|+| ||++++.+.......... ......++.... .
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~----~ 244 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKV---GGRYVTITGCWNPRYGQP--SKWVSQINAHFE----C 244 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEE---EEEEEEEEEEECTTTCSC--CHHHHHHHHHHT----C
T ss_pred CChhcCCCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCC---CcEEEEEEccccccccch--hHHHHHHHhhhc----C
Confidence 99987 6663 999876 899999999999 999999987766543211 001111111111 1
Q ss_pred ccCCHHHHHHHHHhCCCceeEEEec
Q 043533 266 KERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 266 ~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
..++.++|.++++++||+++++..+
T Consensus 245 ~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 245 NIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp CCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 3678999999999999999998775
No 27
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.61 E-value=1.6e-15 Score=128.95 Aligned_cols=156 Identities=13% Similarity=0.155 Sum_probs=109.2
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCCc-chh
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR-FIPP-ANA 210 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~-~~p~-~D~ 210 (301)
..++ +.+. .....+|||||||+|.++..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. ||+
T Consensus 35 ~~~l-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~ 109 (220)
T 3hnr_A 35 EDIL-EDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDT 109 (220)
T ss_dssp HHHH-HHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSE
T ss_pred HHHH-HHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEE
Confidence 3456 5555 456789999999999999999998 579999999 888887765 2489999999987 5555 999
Q ss_pred HHH-----------H--HHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccc--cCCccCCHHHHHH
Q 043533 211 FLF-----------K--ILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN--ATGKERTESEWAK 275 (301)
Q Consensus 211 i~~-----------~--iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~--~~g~~rt~~e~~~ 275 (301)
|++ . +|++++++|+| ||.+++.+...+...................... .....++.++|.+
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYSQLLNK---GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQT 186 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHH
T ss_pred EEECcchhcCChHHHHHHHHHHHHhcCC---CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHH
Confidence 887 3 99999999999 9999999865544322110000000000000000 1112458999999
Q ss_pred HHHhCCCceeEEEecCCceeEEEEe
Q 043533 276 LFFDAVFSHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 276 ll~~aGf~~~~~~~~~~~~~~i~a~ 300 (301)
+|+++||+++.+... ....++.+.
T Consensus 187 ~l~~aGf~v~~~~~~-~~~w~~~~~ 210 (220)
T 3hnr_A 187 IFENNGFHVTFTRLN-HFVWVMEAT 210 (220)
T ss_dssp HHHHTTEEEEEEECS-SSEEEEEEE
T ss_pred HHHHCCCEEEEeecc-ceEEEEeeh
Confidence 999999987766554 456666654
No 28
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=2.6e-15 Score=133.80 Aligned_cols=144 Identities=16% Similarity=0.228 Sum_probs=109.2
Q ss_pred hHHHHHhhhhh--cccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-
Q 043533 135 TSFVVKSECKQ--IFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR- 203 (301)
Q Consensus 135 ~~~~~~~~~~~--~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~- 203 (301)
...++ +.++| .+....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+
T Consensus 67 ~~~l~-~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 67 DEWLA-SELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHH-HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHH-HHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 34566 66611 15677899999999999999999986 469999999 888887764 3689999999988
Q ss_pred CCCc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCH
Q 043533 204 FIPP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTE 270 (301)
Q Consensus 204 ~~p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~ 270 (301)
+++. ||+|++ .+|++++++|+| ||++++.+...+...... .....+... ......+.
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~ 214 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKP---RGVMAITDPMKEDGIDKS---SIQPILDRI----KLHDMGSL 214 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEEEECTTCCGG---GGHHHHHHH----TCSSCCCH
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCC---CeEEEEEEeccCCCCchH---HHHHHHHHh----cCCCCCCH
Confidence 7664 999887 889999999999 999999998766543321 111111111 11234689
Q ss_pred HHHHHHHHhCCCceeEEEec
Q 043533 271 SEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 271 ~e~~~ll~~aGf~~~~~~~~ 290 (301)
.+|.++++++||+++++..+
T Consensus 215 ~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 215 GLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHCCCeEEEEEEC
Confidence 99999999999999988765
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.61 E-value=2.8e-15 Score=130.51 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=107.4
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p 206 (301)
..++ +.++ ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+
T Consensus 26 ~~l~-~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 26 ATLG-RVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHH-HHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHH-HhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 4455 5555 6677899999999999999999998 679999999 888887764 3689999999987 454
Q ss_pred c-chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHH
Q 043533 207 P-ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 274 (301)
Q Consensus 207 ~-~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~ 274 (301)
. ||+|++ ++|++++++|+| ||++++.+...........+ ...+ ........++..+|.
T Consensus 102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGFAGAEELLAQSLKP---GGIMLIGEPYWRQLPATEEI---AQAC----GVSSTSDFLTLPGLV 171 (256)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEE---EEEEEEEEEEETTCCSSHHH---HHTT----TCSCGGGSCCHHHHH
T ss_pred CCCCEEEECCChHhcCCHHHHHHHHHHHcCC---CeEEEEecCcccCCCChHHH---HHHH----hcccccccCCHHHHH
Confidence 4 999886 889999999999 99999998876554332101 1001 001112457999999
Q ss_pred HHHHhCCCceeEEEec
Q 043533 275 KLFFDAVFSHYKITPI 290 (301)
Q Consensus 275 ~ll~~aGf~~~~~~~~ 290 (301)
++|+++||+.+++...
T Consensus 172 ~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 172 GAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHTTTBCCCEEEEC
T ss_pred HHHHHCCCeeEEEEeC
Confidence 9999999999887543
No 30
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.60 E-value=7.8e-15 Score=124.23 Aligned_cols=150 Identities=16% Similarity=0.158 Sum_probs=102.1
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCCCCCc--ch
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLRFIPP--AN 209 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~~~p~--~D 209 (301)
...++ +.+. .+....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+..+. ||
T Consensus 34 ~~~~~-~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 34 APAAL-ERLR-AGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHH-HHHT-TTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHH-HHHh-cCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCcee
Confidence 34455 5554 2455679999999999999999999 569999999 888888775 37899999999875443 99
Q ss_pred hHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcccc-----CCccCCHH
Q 043533 210 AFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNA-----TGKERTES 271 (301)
Q Consensus 210 ~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~g~~rt~~ 271 (301)
+|++ .+|++++++|+| ||.+++.+...+.......+.......-..++... .....+.+
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVRSAVAP---GGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPA 186 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHH
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCC---CeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHH
Confidence 8886 789999999999 89999988755332211100000000000001000 12246999
Q ss_pred HHHHHHHhCCCceeEEEecC
Q 043533 272 EWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 272 e~~~ll~~aGf~~~~~~~~~ 291 (301)
+|.++|+++||++......+
T Consensus 187 ~~~~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 187 ELTERLTALGWSCSVDEVHP 206 (218)
T ss_dssp HHHHHHHHTTEEEEEEEEET
T ss_pred HHHHHHHHCCCEEEeeeccc
Confidence 99999999999955544444
No 31
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.59 E-value=4.6e-15 Score=129.17 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=107.4
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~ 207 (301)
.++ +.+. .+.+..+|||||||+|.++..+++.+|. +++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 36 ~~l-~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 36 KAV-SFIN-ELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN 112 (257)
T ss_dssp HHH-TTSC-CCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT
T ss_pred HHH-HHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC
Confidence 344 4443 2556779999999999999999999986 9999999 888887764 4679999999977 6653
Q ss_pred --chhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHH
Q 043533 208 --ANAFLF----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAK 275 (301)
Q Consensus 208 --~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ 275 (301)
||+|++ .+|++++++|+| ||++++.+.......... .....+.- .....++.++|.+
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~ 181 (257)
T 3f4k_A 113 EELDLIWSEGAIYNIGFERGMNEWSKYLKK---GGFIAVSEASWFTSERPA---EIEDFWMD-----AYPEISVIPTCID 181 (257)
T ss_dssp TCEEEEEEESCSCCCCHHHHHHHHHTTEEE---EEEEEEEEEEESSSCCCH---HHHHHHHH-----HCTTCCBHHHHHH
T ss_pred CCEEEEEecChHhhcCHHHHHHHHHHHcCC---CcEEEEEEeeccCCCChH---HHHHHHHH-----hCCCCCCHHHHHH
Confidence 999986 899999999999 999999987655433221 01111111 1122568999999
Q ss_pred HHHhCCCceeEEEecC
Q 043533 276 LFFDAVFSHYKITPIF 291 (301)
Q Consensus 276 ll~~aGf~~~~~~~~~ 291 (301)
+|+++||+++.+...+
T Consensus 182 ~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 182 KMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHTTEEEEEEEECC
T ss_pred HHHHCCCeEEEEEECC
Confidence 9999999999987664
No 32
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.59 E-value=1.8e-15 Score=133.37 Aligned_cols=141 Identities=13% Similarity=0.246 Sum_probs=104.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCc--chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIPP--ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p~--~D~i~~--- 213 (301)
+....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 56678999999999999999999999999999999 888887764 3589999999987 6654 999887
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchh--hccccCCccCCHHHHHHHHHhCCCc
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIV--MSVNATGKERTESEWAKLFFDAVFS 283 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~--~~~~~~g~~rt~~e~~~ll~~aGf~ 283 (301)
.+|++++++|+| ||.+++.+.........+........+... .....++..++..++.++|+++||+
T Consensus 115 l~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 191 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKP---GGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFE 191 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEE---EEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCE
T ss_pred hhhcCCHHHHHHHHHHHcCC---CcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCC
Confidence 899999999999 899999885432211111000001111111 1112345567788999999999999
Q ss_pred eeEEEec
Q 043533 284 HYKITPI 290 (301)
Q Consensus 284 ~~~~~~~ 290 (301)
++++...
T Consensus 192 ~v~~~~~ 198 (276)
T 3mgg_A 192 KIRVEPR 198 (276)
T ss_dssp EEEEEEE
T ss_pred eEEEeeE
Confidence 9988754
No 33
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.59 E-value=4.1e-15 Score=129.82 Aligned_cols=141 Identities=18% Similarity=0.237 Sum_probs=108.2
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc--
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP-- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~-- 207 (301)
..++ +.++ .....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 45 ~~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 45 KKIL-SDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHT-TTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTC
T ss_pred HHHH-HhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCc
Confidence 4455 5554 5667899999999999999999987 789999999 888877764 2789999999988 6664
Q ss_pred chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHH
Q 043533 208 ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 274 (301)
Q Consensus 208 ~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~ 274 (301)
||+|++ .+|++++++|+| ||.+++.+...+....-. ..+... ....+...++.++|.
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~ 190 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKP---TGTLLITDYCATEKENWD------DEFKEY-VKQRKYTLITVEEYA 190 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEESCGGGCC------HHHHHH-HHHHTCCCCCHHHHH
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCC---CCEEEEEEeccCCcccch------HHHHHH-HhcCCCCCCCHHHHH
Confidence 998887 789999999999 999999988766522110 011100 111233467999999
Q ss_pred HHHHhCCCceeEEEec
Q 043533 275 KLFFDAVFSHYKITPI 290 (301)
Q Consensus 275 ~ll~~aGf~~~~~~~~ 290 (301)
++++++||+++++...
T Consensus 191 ~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 191 DILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHHTTCEEEEEEEC
T ss_pred HHHHHcCCeEEEEEeC
Confidence 9999999999988765
No 34
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.58 E-value=4e-15 Score=130.62 Aligned_cols=133 Identities=13% Similarity=0.095 Sum_probs=105.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc--chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP--ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~--~D~i~~-- 213 (301)
+.+..+|||||||+|.++..+++. |..+++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 566789999999999999999998 8889999999 888887764 3789999999987 6654 999886
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
.+|++++++|+| ||.+++.+............ ...+. ......++..++.++++++||+++
T Consensus 123 ~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 123 AIYNIGFERGLNEWRKYLKK---GGYLAVSECSWFTDERPAEI---NDFWM-----DAYPEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp CGGGTCHHHHHHHHGGGEEE---EEEEEEEEEEESSSCCCHHH---HHHHH-----HHCTTCEEHHHHHHHHHHTTEEEE
T ss_pred CceecCHHHHHHHHHHHcCC---CCEEEEEEeeecCCCChHHH---HHHHH-----HhCCCCCCHHHHHHHHHHCCCEEE
Confidence 899999999999 99999999876544332211 11110 011235689999999999999999
Q ss_pred EEEecC
Q 043533 286 KITPIF 291 (301)
Q Consensus 286 ~~~~~~ 291 (301)
++..++
T Consensus 192 ~~~~~~ 197 (267)
T 3kkz_A 192 ATFILP 197 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 988765
No 35
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.58 E-value=2.4e-15 Score=134.89 Aligned_cols=152 Identities=12% Similarity=0.087 Sum_probs=107.7
Q ss_pred ccCCCeEEEecCCccHHHHHHH-HHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIIS-EAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~-~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~-- 213 (301)
+.+..+|||||||+|.++..++ ..+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4667899999999999999996 6789999999999 888887764 3569999999987 5555 998887
Q ss_pred ------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccch-hhh--hh-h---hhhc--hhhcccc-CCccCCHH
Q 043533 214 ------------KILKKRREAIASNGERGKVIIIDIVINAEEEEH-ELT--ET-K---FLFD--IVMSVNA-TGKERTES 271 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~-~~~--~~-~---~~~d--~~~~~~~-~g~~rt~~ 271 (301)
.+|++++++|+| ||.+++.+...+...... .+. .. . .... +...... ....++.+
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP---GGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 479999999999 898888776544322110 000 00 0 0000 0000001 11347999
Q ss_pred HHHHHHHhCCCceeEEEecC-CceeEEEEeC
Q 043533 272 EWAKLFFDAVFSHYKITPIF-GMKSLIEVYP 301 (301)
Q Consensus 272 e~~~ll~~aGf~~~~~~~~~-~~~~~i~a~~ 301 (301)
++.++|+++||+++++.... .....+.|+|
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 99999999999999998653 3445566654
No 36
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.57 E-value=1.4e-14 Score=124.81 Aligned_cols=132 Identities=18% Similarity=0.214 Sum_probs=101.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCCc--chhHHH------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMLR-FIPP--ANAFLF------ 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~ri~~~~~D~~~-~~p~--~D~i~~------ 213 (301)
++...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++. ||+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 455689999999999999999998 568999999 888887765 5789999999987 6654 999887
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEE
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKIT 288 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 288 (301)
.+|++++++|+| ||.+++.+.......... .....+. .......++..++.++++++||+++++.
T Consensus 129 ~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKS---DGYACIAILGPTAKPREN---SYPRLYG----KDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SSCHHHHHHHHHHHEEE---EEEEEEEEECTTCGGGGG---GGGGGGT----CCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCC---CeEEEEEEcCCcchhhhh---hhhhhcc----ccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 899999999999 888888775333222111 0011111 1123345789999999999999999987
Q ss_pred ec
Q 043533 289 PI 290 (301)
Q Consensus 289 ~~ 290 (301)
.+
T Consensus 199 ~~ 200 (242)
T 3l8d_A 199 GV 200 (242)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 37
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.57 E-value=3.6e-15 Score=133.26 Aligned_cols=158 Identities=16% Similarity=0.212 Sum_probs=107.4
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C----CCeEEEeCCCCC-
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----A----DNLKYIAGDMLR- 203 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~----~ri~~~~~D~~~- 203 (301)
...++ +.++ ....+|||||||+|.++..++++ +.+++++|+ +.+++.+++ . .+++++.+|+.+
T Consensus 72 ~~~~~-~~~~---~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 72 AREFA-TRTG---PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHH-HHHC---CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred HHHHH-HhhC---CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 44455 5554 33459999999999999999988 578999999 889888875 2 789999999988
Q ss_pred CCCc-chhHHH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccch-----hhhh-hhh---------
Q 043533 204 FIPP-ANAFLF--------------KILKKRREAIASNGERGKVIIIDIVINAEEEEH-----ELTE-TKF--------- 253 (301)
Q Consensus 204 ~~p~-~D~i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~-----~~~~-~~~--------- 253 (301)
+.+. ||+|++ .+|++++++|+| ||++++.....+.....+ .+.. ...
T Consensus 146 ~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 222 (299)
T 3g2m_A 146 ALDKRFGTVVISSGSINELDEADRRGLYASVREHLEP---GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHL 222 (299)
T ss_dssp CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEE---EEEEEEEEECCHHHHSCCCCC-------------CCEEEE
T ss_pred CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCC---CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEe
Confidence 6665 996653 889999999999 888777655332210000 0000 000
Q ss_pred ----hhchhhccc-----------cCCccCCHHHHHHHHHhCCCceeEEEecCC------ceeEEEEeC
Q 043533 254 ----LFDIVMSVN-----------ATGKERTESEWAKLFFDAVFSHYKITPIFG------MKSLIEVYP 301 (301)
Q Consensus 254 ----~~d~~~~~~-----------~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~------~~~~i~a~~ 301 (301)
...+.+... ..-+.+|.++|.++|+++||+++++..+.. ...+|||.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 223 PAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp EEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred ccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 000000000 011246999999999999999999988752 246777753
No 38
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=5.7e-15 Score=127.69 Aligned_cols=141 Identities=13% Similarity=0.237 Sum_probs=107.4
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCc
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p~ 207 (301)
..++ +.++ .....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 11 ~~~~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMI-KTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHH-HHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred chHH-HHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 3455 6666 77789999999999999999999875 8999999 888887764 2689999999977 6654
Q ss_pred --chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhch-hhccc-cCCccCCHHH
Q 043533 208 --ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI-VMSVN-ATGKERTESE 272 (301)
Q Consensus 208 --~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~-~~~~~-~~g~~rt~~e 272 (301)
||+|++ .+|++++++|+| ||.+++.+...+..... ..++.. ..+.. .....++.++
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQ---DGRFLLVDHYAPEDPVL------DEFVNHLNRLRDPSHVRESSLSE 156 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHH------HHHHHHHHHHHCTTCCCCCBHHH
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCC---CcEEEEEEcCCCCChhH------HHHHHHHHHhccccccCCCCHHH
Confidence 999886 899999999999 89999998876654211 111111 11111 1235679999
Q ss_pred HHHHHHhCCCceeEEEec
Q 043533 273 WAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 273 ~~~ll~~aGf~~~~~~~~ 290 (301)
|.++|+++||+.+++...
T Consensus 157 ~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 157 WQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHCCCcEEEEEee
Confidence 999999999998887654
No 39
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.57 E-value=9.2e-15 Score=135.35 Aligned_cols=134 Identities=13% Similarity=0.188 Sum_probs=103.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCC--------------CCeEEEeCCCCC-------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPEA--------------DNLKYIAGDMLR------- 203 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~~--------------~ri~~~~~D~~~------- 203 (301)
.....+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. ++++|+.+|+.+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3456899999999999999999986 8899999999 8888877642 699999999976
Q ss_pred CCCc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCH
Q 043533 204 FIPP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTE 270 (301)
Q Consensus 204 ~~p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~ 270 (301)
+++. ||+|++ .+|++++++|+| ||.+++.+.......... ...+........+..++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 231 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRD---GGELYFSDVYADRRLSEA------AQQDPILYGECLGGALYL 231 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEEEESSCCCHH------HHHCHHHHHTTCTTCCBH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCC---CCEEEEEEeccccccCHh------HhhhHHHhhcccccCCCH
Confidence 5554 999987 899999999999 899999887665433221 111111122233456789
Q ss_pred HHHHHHHHhCCCceeEEEe
Q 043533 271 SEWAKLFFDAVFSHYKITP 289 (301)
Q Consensus 271 ~e~~~ll~~aGf~~~~~~~ 289 (301)
++|.++|+++||+.+++..
T Consensus 232 ~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 232 EDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHCCCceEEEEe
Confidence 9999999999999886644
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=7.3e-15 Score=130.36 Aligned_cols=141 Identities=14% Similarity=0.160 Sum_probs=101.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPG-IKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~-~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~---- 213 (301)
..+..+|||||||+|.++..+++.+|+ .+++++|+ |.+++.+++ ..+++++.+|+.+ +++. ||+|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 566789999999999999999999995 89999999 888876654 3489999999987 6665 999887
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeee-----C---CCccchhhhhhhhhhchhh--ccccCCccCCHHHHHHH
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVI-----N---AEEEEHELTETKFLFDIVM--SVNATGKERTESEWAKL 276 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~-----~---~~~~~~~~~~~~~~~d~~~--~~~~~g~~rt~~e~~~l 276 (301)
.+|++++++|+| ||.+++.++.. . ++...+.......+..+.. ....+....+..++.++
T Consensus 100 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKK---GGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIY 176 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEE---EEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHH
T ss_pred hcCCCHHHHHHHHHHHcCC---CCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHH
Confidence 999999999999 99999988651 1 1111110000001111110 00123334566789999
Q ss_pred HHhCCCceeEEEec
Q 043533 277 FFDAVFSHYKITPI 290 (301)
Q Consensus 277 l~~aGf~~~~~~~~ 290 (301)
|+++||+.+++...
T Consensus 177 l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 177 LSELGVKNIECRVS 190 (284)
T ss_dssp HHHTTCEEEEEEEC
T ss_pred HHHcCCCeEEEEEc
Confidence 99999999987443
No 41
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.53 E-value=1.9e-14 Score=125.14 Aligned_cols=145 Identities=15% Similarity=0.074 Sum_probs=101.0
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCCc--chh
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMLR-FIPP--ANA 210 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~ri~~~~~D~~~-~~p~--~D~ 210 (301)
+. +.++ .....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++. ||+
T Consensus 36 l~-~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 36 LK-KMLP--DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HH-TTCC--CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HH-Hhhh--ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 44 4444 346789999999999999999999765 8999999 888887765 4789999999977 6653 999
Q ss_pred HHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeC------------CCccchhhhhhhhhhch-----hhcc-
Q 043533 211 FLF-----------KILKKRREAIASNGERGKVIIIDIVIN------------AEEEEHELTETKFLFDI-----VMSV- 261 (301)
Q Consensus 211 i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~------------~~~~~~~~~~~~~~~d~-----~~~~- 261 (301)
|++ .+|++++++|+| ||.+++...... .......+. ....++- .+..
T Consensus 112 v~~~~~l~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (253)
T 3g5l_A 112 VLSSLALHYIASFDDICKKVYINLKS---SGSFIFSVEHPVFTADGRQDWYTDETGNKLHWP-VDRYFNESMRTSHFLGE 187 (253)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEECHHHHSSSSCSCEECSSCCEEEEE-ECCTTCCCEEEEEETTE
T ss_pred EEEchhhhhhhhHHHHHHHHHHHcCC---CcEEEEEeCCCccccCccccceeccCCceEEEE-eccccccceEEEeeccc
Confidence 887 999999999999 888877643211 000000000 0000000 0000
Q ss_pred ccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 262 NATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 262 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
......+|.++|.++|+++||+++++...
T Consensus 188 ~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 188 DVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred cCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 01122359999999999999999998754
No 42
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.53 E-value=3e-14 Score=126.27 Aligned_cols=147 Identities=10% Similarity=0.130 Sum_probs=107.4
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCc
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIPP 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p~ 207 (301)
..++ +.++ ..+..+|||||||+|.++..++++++ .+++++|+ +++++.+++ .++++++.+|+.+ +|.
T Consensus 54 ~~~~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 128 (287)
T 1kpg_A 54 DLAL-GKLG--LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-FDE 128 (287)
T ss_dssp HHHH-TTTT--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-CCC
T ss_pred HHHH-HHcC--CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-CCC
Confidence 3456 5555 66678999999999999999997774 49999999 888887764 3689999999964 334
Q ss_pred -chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccch----hhh-hhhhhhchh-hccccCCcc
Q 043533 208 -ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEH----ELT-ETKFLFDIV-MSVNATGKE 267 (301)
Q Consensus 208 -~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~----~~~-~~~~~~d~~-~~~~~~g~~ 267 (301)
||+|++ .+|++++++|+| ||++++.+...+...... +.. ......++. .....++..
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA---DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRL 205 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT---TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCC
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCC---CCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCC
Confidence 898876 889999999999 999999988765432200 000 000111111 111245667
Q ss_pred CCHHHHHHHHHhCCCceeEEEec
Q 043533 268 RTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 268 rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
++.++|.++++++||+++++...
T Consensus 206 ~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 206 PSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcEEEEEEeC
Confidence 89999999999999999998765
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.53 E-value=6.4e-15 Score=120.30 Aligned_cols=135 Identities=19% Similarity=0.208 Sum_probs=106.1
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCCCCc--chhHHH
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLRFIPP--ANAFLF 213 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~~~p~--~D~i~~ 213 (301)
++ +.++ ..+..+|||||||+|.++..+++.+. +++++|+ +.+++.+++ .++++++.+| .+++. ||+|++
T Consensus 9 ~~-~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 9 YL-PNIF--EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILF 81 (170)
T ss_dssp TH-HHHH--SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEE
T ss_pred HH-HhcC--cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEE
Confidence 45 5555 66678999999999999999999874 8999999 888887775 6799999999 44443 999887
Q ss_pred -----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCC
Q 043533 214 -----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVF 282 (301)
Q Consensus 214 -----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf 282 (301)
.+|+++++.|+| ||++++.+.........+. ....++.++|+++++ ||
T Consensus 82 ~~~l~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~--Gf 140 (170)
T 3i9f_A 82 ANSFHDMDDKQHVISEVKRILKD---DGRVIIIDWRKENTGIGPP----------------LSIRMDEKDYMGWFS--NF 140 (170)
T ss_dssp ESCSTTCSCHHHHHHHHHHHEEE---EEEEEEEEECSSCCSSSSC----------------GGGCCCHHHHHHHTT--TE
T ss_pred ccchhcccCHHHHHHHHHHhcCC---CCEEEEEEcCccccccCch----------------HhhhcCHHHHHHHHh--Cc
Confidence 899999999999 8999998875544322210 011368999999999 99
Q ss_pred ceeEEEecCCceeEEEEe
Q 043533 283 SHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 283 ~~~~~~~~~~~~~~i~a~ 300 (301)
+++++.........+.++
T Consensus 141 ~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 141 VVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp EEEEEECSSTTEEEEEEE
T ss_pred EEEEccCCCCceEEEEEe
Confidence 999999887655556554
No 44
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=2e-14 Score=120.78 Aligned_cols=131 Identities=17% Similarity=0.138 Sum_probs=101.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc--chhHHH-----------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP--ANAFLF----------- 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~--~D~i~~----------- 213 (301)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 689999999999999999998 558999999 888888876 6789999999987 6553 998887
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecC
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 291 (301)
.+|++++++|+| ||.+++.....+.... + .. . ......++.++|.++|+++||+++++...+
T Consensus 120 ~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~---~------~~-~---~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVED---GGGLLMSFFSGPSLEP---M------YH-P---VATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEE---EEEEEEEEECCSSCEE---E------CC-S---SSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCC---CcEEEEEEccCCchhh---h------hc-h---hhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 899999999999 8888887754333111 0 00 0 012235689999999999999999998775
Q ss_pred C-ceeEEE
Q 043533 292 G-MKSLIE 298 (301)
Q Consensus 292 ~-~~~~i~ 298 (301)
. ++..+.
T Consensus 184 ~~p~~~l~ 191 (203)
T 3h2b_A 184 RFPHAYLT 191 (203)
T ss_dssp TSSEEEEE
T ss_pred CCcchhhh
Confidence 4 444443
No 45
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.52 E-value=8.4e-15 Score=127.17 Aligned_cols=136 Identities=15% Similarity=0.219 Sum_probs=103.6
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc--
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP-- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~-- 207 (301)
..++ +.++ .....+|||||||+|.++..+++++ ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++.
T Consensus 83 ~~~l-~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 83 RNFI-ASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHH-HTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSC
T ss_pred HHHH-Hhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCC
Confidence 3455 5554 4567899999999999999999887 567999999 888887764 2689999999977 6653
Q ss_pred chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHH
Q 043533 208 ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 274 (301)
Q Consensus 208 ~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~ 274 (301)
||+|++ .+|++++++|+| ||.+++.+........ ..+. ......++.++|.
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~ 222 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTP---NGYIFFKENCSTGDRF---------LVDK----EDSSLTRSDIHYK 222 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC--CCE---------EEET----TTTEEEBCHHHHH
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCcccc---------eecc----cCCcccCCHHHHH
Confidence 898876 889999999999 8999998864432211 0110 0122356999999
Q ss_pred HHHHhCCCceeEEEecC
Q 043533 275 KLFFDAVFSHYKITPIF 291 (301)
Q Consensus 275 ~ll~~aGf~~~~~~~~~ 291 (301)
++|+++||+++++....
T Consensus 223 ~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 223 RLFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHHTCCEEEEEECT
T ss_pred HHHHHCCCEEEEeeecC
Confidence 99999999999987653
No 46
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.51 E-value=1e-13 Score=119.38 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=99.9
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCCc--ch
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMLR-FIPP--AN 209 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~ri~~~~~D~~~-~~p~--~D 209 (301)
.+. ..++ .....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++. ||
T Consensus 34 ~l~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 34 ALR-AMLP--EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHH-HHSC--CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHH-Hhcc--ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 345 5555 44678999999999999999998843 38999999 888887764 3579999999987 6653 89
Q ss_pred hHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCcc-chhhh--h-------hhhhhc-----hhhcc-c
Q 043533 210 AFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEE-EHELT--E-------TKFLFD-----IVMSV-N 262 (301)
Q Consensus 210 ~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~-~~~~~--~-------~~~~~d-----~~~~~-~ 262 (301)
+|++ .+|++++++|+| ||++++.......... ...+. . ....+. ...+. .
T Consensus 110 ~v~~~~~l~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 110 LAYSSLALHYVEDVARLFRTVHQALSP---GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred EEEEeccccccchHHHHHHHHHHhcCc---CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 8887 899999999999 8888886642110000 00000 0 000000 00000 0
Q ss_pred cCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 263 ATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 263 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.....+|.++|.++|+++||+++++...
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 1122368999999999999999998764
No 47
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=1.4e-14 Score=128.33 Aligned_cols=139 Identities=13% Similarity=0.135 Sum_probs=98.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C-CCc--chhHHH---
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-F-IPP--ANAFLF--- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~-~p~--~D~i~~--- 213 (301)
...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ + ++. ||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3579999999999999999988 679999999 888888774 2789999999987 4 343 999887
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhh-hhhhhhchh----hccccCCccCCHHHHHHHHHhC
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELT-ETKFLFDIV----MSVNATGKERTESEWAKLFFDA 280 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~-~~~~~~d~~----~~~~~~g~~rt~~e~~~ll~~a 280 (301)
.+|++++++|+| ||.+++.+............. ......... .........++.+++.++|+++
T Consensus 146 l~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRP---GGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred hhcccCHHHHHHHHHHHcCC---CeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 899999999999 888888765332211110000 000000000 0000123457899999999999
Q ss_pred CCceeEEEecCC
Q 043533 281 VFSHYKITPIFG 292 (301)
Q Consensus 281 Gf~~~~~~~~~~ 292 (301)
||+++++..+..
T Consensus 223 Gf~v~~~~~~~~ 234 (285)
T 4htf_A 223 GWQIMGKTGVRV 234 (285)
T ss_dssp TCEEEEEEEESS
T ss_pred CCceeeeeeEEE
Confidence 999999887643
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=2.7e-14 Score=124.29 Aligned_cols=144 Identities=11% Similarity=0.010 Sum_probs=101.4
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc-chhH
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP-ANAF 211 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~-~D~i 211 (301)
..++ +.++ .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .++++++.+|+.+ +.+. ||+|
T Consensus 23 ~~l~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v 99 (259)
T 2p35_A 23 RDLL-AQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLL 99 (259)
T ss_dssp HHHH-TTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEE
T ss_pred HHHH-HhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEE
Confidence 3456 5555 56678999999999999999999999999999999 888888765 5789999999987 5223 9998
Q ss_pred HH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhh-cc---ccCCccCCHHHHHHH
Q 043533 212 LF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVM-SV---NATGKERTESEWAKL 276 (301)
Q Consensus 212 ~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~---~~~g~~rt~~e~~~l 276 (301)
++ .+|++++++|+| ||.+++.............+........+.- +. ......++.++|.++
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (259)
T 2p35_A 100 YANAVFQWVPDHLAVLSQLMDQLES---GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNA 176 (259)
T ss_dssp EEESCGGGSTTHHHHHHHHGGGEEE---EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHH
T ss_pred EEeCchhhCCCHHHHHHHHHHhcCC---CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHH
Confidence 87 899999999999 8988887753222111100000000000100 00 012345789999999
Q ss_pred HHhCCCcee
Q 043533 277 FFDAVFSHY 285 (301)
Q Consensus 277 l~~aGf~~~ 285 (301)
|+++||++.
T Consensus 177 l~~aGf~v~ 185 (259)
T 2p35_A 177 LSPKSSRVD 185 (259)
T ss_dssp HGGGEEEEE
T ss_pred HHhcCCceE
Confidence 999999743
No 49
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.50 E-value=6.5e-14 Score=123.87 Aligned_cols=127 Identities=18% Similarity=0.273 Sum_probs=95.8
Q ss_pred CCCeEEEecCCc---cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCC------------CC--
Q 043533 149 GLGSLVDVGGGN---VSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLRF------------IP-- 206 (301)
Q Consensus 149 ~~~~vlDvGgG~---G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~~------------~p-- 206 (301)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.|++.+++ .++++++.+|++++ ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888999999999999 999988874 47899999999752 22
Q ss_pred cchhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHH
Q 043533 207 PANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW 273 (301)
Q Consensus 207 ~~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~ 273 (301)
.+|+|++ .+|++++++|+| ||+|++.+...+. ... . ....+...........|+.+|+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---GG~l~i~~~~~~~--~~~-~---~~~~~~~~~~~~~~~~~s~~ei 227 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP---GSYLFMTSLVDTG--LPA-Q---QKLARITRENLGEGWARTPEEI 227 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT---TCEEEEEEEBCSS--CHH-H---HHHHHHHHHHHSCCCCBCHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCC---CcEEEEEEecCcc--hHH-H---HHHHHHHHhcCCCCccCCHHHH
Confidence 3676664 899999999999 9999998876532 111 1 1122221111123567899999
Q ss_pred HHHHHhCCCceeE
Q 043533 274 AKLFFDAVFSHYK 286 (301)
Q Consensus 274 ~~ll~~aGf~~~~ 286 (301)
.++| .||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998775
No 50
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.50 E-value=5e-14 Score=125.97 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=109.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCc
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIPP 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p~ 207 (301)
..++ +.++ ..+..+|||||||+|.++..++++++ .+++++|+ +.+++.+++ .++++++.+|+.+. +.
T Consensus 62 ~~~~-~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 136 (302)
T 3hem_A 62 KLAL-DKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DE 136 (302)
T ss_dssp HHHH-HTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CC
T ss_pred HHHH-HHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CC
Confidence 3456 6555 66778999999999999999999987 89999999 888887764 35899999999654 44
Q ss_pred -chhHHH--------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhh-----hhhhhchh-hc
Q 043533 208 -ANAFLF--------------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTE-----TKFLFDIV-MS 260 (301)
Q Consensus 208 -~D~i~~--------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~-----~~~~~d~~-~~ 260 (301)
||+|++ .+|++++++|+| ||++++.+...+.......... .....++. ..
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD---DGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTE 213 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT---TCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC---CcEEEEEEEeccCccchhhccccccccccchHHHHHHh
Confidence 887765 569999999999 9999998887664322110000 00001111 11
Q ss_pred cccCCccCCHHHHHHHHHhCCCceeEEEecC
Q 043533 261 VNATGKERTESEWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 261 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 291 (301)
...++..++.+++.++++++||+++.+....
T Consensus 214 ~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 214 IFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred cCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 2245678899999999999999999987764
No 51
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=4.6e-14 Score=124.68 Aligned_cols=147 Identities=10% Similarity=0.037 Sum_probs=105.1
Q ss_pred cchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc-c
Q 043533 133 IMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP-A 208 (301)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~-~ 208 (301)
.....++ +.++ .....+|||||||+|.++..+++ |+.+++++|+ +.+++.+++ .++++++.+|+.+ +++. |
T Consensus 44 ~~~~~l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~f 118 (279)
T 3ccf_A 44 QYGEDLL-QLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPL 118 (279)
T ss_dssp SSCCHHH-HHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCE
T ss_pred HHHHHHH-HHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCc
Confidence 3445567 6666 56678999999999999999998 7889999999 888887765 4689999999987 6655 9
Q ss_pred hhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhh-hhhhhchhh--c-cc-cCCccCCHHH
Q 043533 209 NAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTE-TKFLFDIVM--S-VN-ATGKERTESE 272 (301)
Q Consensus 209 D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~-~~~~~d~~~--~-~~-~~g~~rt~~e 272 (301)
|+|++ .+|++++++|+| ||++++....... . .. +.. ....+...- . .. .....++.++
T Consensus 119 D~v~~~~~l~~~~d~~~~l~~~~~~Lkp---gG~l~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T 3ccf_A 119 DAVFSNAMLHWVKEPEAAIASIHQALKS---GGRFVAEFGGKGN-I-KY-ILEALYNALETLGIHNPQALNPWYFPSIGE 192 (279)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEE---EEEEEEEEECTTT-T-HH-HHHHHHHHHHHHTCCCGGGGCCCCCCCHHH
T ss_pred CEEEEcchhhhCcCHHHHHHHHHHhcCC---CcEEEEEecCCcc-h-HH-HHHHHHHHHHhcCCccccCcCceeCCCHHH
Confidence 99887 899999999999 8888776543221 1 11 100 000000000 0 00 1123568999
Q ss_pred HHHHHHhCCCceeEEEec
Q 043533 273 WAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 273 ~~~ll~~aGf~~~~~~~~ 290 (301)
|.++|+++||+++++...
T Consensus 193 ~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 193 YVNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEe
Confidence 999999999999887654
No 52
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.50 E-value=5.3e-14 Score=120.37 Aligned_cols=136 Identities=14% Similarity=0.177 Sum_probs=99.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCC-CCCc--chhH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLR-FIPP--ANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~-~~p~--~D~i 211 (301)
++...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.. +++. ||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 355789999999999999999998 679999999 877776653 2368999999987 6654 9988
Q ss_pred HH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc-------c--------
Q 043533 212 LF--------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV-------N-------- 262 (301)
Q Consensus 212 ~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-------~-------- 262 (301)
++ .+|++++++|+| ||++++.+......... +. .....++.... .
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKP---GAYLYLVEFGQNWHLKL--YR-KRYLHDFPITKEEGSFLARDPETGETE 179 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCTTSHH--HH-HHHHHHHHHHCSTTEEEEECTTTCCEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCC---CeEEEEEECCcchhHHH--HH-HHhhhhccchhhhcceEecccccCCcc
Confidence 86 699999999999 89999988755332211 10 00011110000 0
Q ss_pred cCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 263 ATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 263 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.....++.++|+++|+++||+++++...
T Consensus 180 ~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 180 FIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 0123579999999999999999987643
No 53
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.50 E-value=6.4e-14 Score=120.72 Aligned_cols=136 Identities=14% Similarity=0.158 Sum_probs=97.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCCCCC-c-chhHHH---------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLRFIP-P-ANAFLF--------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~~~p-~-~D~i~~--------- 213 (301)
....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+..+ . ||+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 4567899999999999999999876 6999999 888887765 2289999999977433 3 999887
Q ss_pred --HHHHHHH-HhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhh-c---hh--hccccCCccCCHHHHHHHHHhCCCce
Q 043533 214 --KILKKRR-EAIASNGERGKVIIIDIVINAEEEEHELTETKFLF-D---IV--MSVNATGKERTESEWAKLFFDAVFSH 284 (301)
Q Consensus 214 --~iL~~~~-~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~-d---~~--~~~~~~g~~rt~~e~~~ll~~aGf~~ 284 (301)
.+|++++ ++|+| ||++++.++........ .......+ . +. .........++.+++.++|+++||++
T Consensus 119 ~~~~l~~~~~~~Lkp---gG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 119 PVALLKRINDDWLAE---GGRLFLVCPNANAVSRQ--IAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp HHHHHHHHHHTTEEE---EEEEEEEEECTTCHHHH--HHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCC---CCEEEEEcCChHHHHHH--HHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 8999999 99999 89888876532211000 00000000 0 00 00112234679999999999999999
Q ss_pred eEEEec
Q 043533 285 YKITPI 290 (301)
Q Consensus 285 ~~~~~~ 290 (301)
+++...
T Consensus 194 ~~~~~~ 199 (250)
T 2p7i_A 194 TYRSGI 199 (250)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 988654
No 54
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.50 E-value=1e-13 Score=119.75 Aligned_cols=128 Identities=15% Similarity=0.183 Sum_probs=97.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC---CCCc--chhHHH-------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR---FIPP--ANAFLF------- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~---~~p~--~D~i~~------- 213 (301)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++.+|+.+ +++. ||+|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhC
Confidence 456789999999999999999998 557999999 8888888754 9999999866 5554 999887
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEE
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKI 287 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 287 (301)
.+|++++++|+| ||.+++..... .... ...+.. ........++.+++.++++++||+++++
T Consensus 115 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~-~~~~--------~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKY---SSYIVIESPNP-TSLY--------SLINFY-IDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp CGGGHHHHHHHHHHHBCT---TCCEEEEEECT-TSHH--------HHHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHHHHHHcCC---CcEEEEEeCCc-chhH--------HHHHHh-cCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 899999999999 89888865431 1110 111111 1112334678999999999999999988
Q ss_pred EecC
Q 043533 288 TPIF 291 (301)
Q Consensus 288 ~~~~ 291 (301)
....
T Consensus 182 ~~~~ 185 (240)
T 3dli_A 182 EFFE 185 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7653
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.49 E-value=2.7e-14 Score=121.47 Aligned_cols=143 Identities=12% Similarity=0.046 Sum_probs=102.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC----C-CC-c-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR----F-IP-P- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~----~-~p-~- 207 (301)
..++ +.+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++.+..+|+.+ + .+ .
T Consensus 42 ~~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 42 QAIL-LAIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHH-HHHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCC
T ss_pred HHHH-HHhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCC
Confidence 3455 5555 455689999999999999999988 568999999 8899888877788888888754 1 22 3
Q ss_pred chhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc------ccCCccCCHH
Q 043533 208 ANAFLF----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV------NATGKERTES 271 (301)
Q Consensus 208 ~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~------~~~g~~rt~~ 271 (301)
||+|++ .+|++++++|+| ||.+++.+.......... +. ..+....... ......+|.+
T Consensus 117 fD~v~~~~~l~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (227)
T 3e8s_A 117 YDLICANFALLHQDIIELLSAMRTLLVP---GGALVIQTLHPWSVADGD-YQ--DGWREESFAGFAGDWQPMPWYFRTLA 190 (227)
T ss_dssp EEEEEEESCCCSSCCHHHHHHHHHTEEE---EEEEEEEECCTTTTCTTC-CS--CEEEEECCTTSSSCCCCEEEEECCHH
T ss_pred ccEEEECchhhhhhHHHHHHHHHHHhCC---CeEEEEEecCccccCccc-cc--cccchhhhhccccCcccceEEEecHH
Confidence 899887 899999999999 898888776443322211 00 0000000000 0112346999
Q ss_pred HHHHHHHhCCCceeEEEe
Q 043533 272 EWAKLFFDAVFSHYKITP 289 (301)
Q Consensus 272 e~~~ll~~aGf~~~~~~~ 289 (301)
+|.++|+++||+++++..
T Consensus 191 ~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 191 SWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEec
Confidence 999999999999999875
No 56
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=1.1e-13 Score=121.13 Aligned_cols=141 Identities=11% Similarity=0.180 Sum_probs=104.3
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCc--chh
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPP--ANA 210 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~ 210 (301)
...++ +.++ ..+..+|||||||+|.++..+++ |+.+++++|+ +.+++.+++..+++|+.+|+.+ +++. ||+
T Consensus 23 ~~~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~ 97 (261)
T 3ege_A 23 VNAII-NLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDG 97 (261)
T ss_dssp HHHHH-HHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSE
T ss_pred HHHHH-HHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeE
Confidence 34455 5555 56778999999999999999997 7889999999 9999999876699999999987 6664 999
Q ss_pred HHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHh
Q 043533 211 FLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFD 279 (301)
Q Consensus 211 i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~ 279 (301)
|++ .+|++++++|+ . |++++++...+..... +. ...+.. +........++.+++. +|++
T Consensus 98 v~~~~~l~~~~~~~~~l~~~~~~Lk-g---G~~~~~~~~~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 98 VISILAIHHFSHLEKSFQEMQRIIR-D---GTIVLLTFDIRLAQRI--WL--YDYFPF-LWEDALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHHBC-S---SCEEEEEECGGGCCCC--GG--GGTCHH-HHHHHHTSCCHHHHHH-HHHH
T ss_pred EEEcchHhhccCHHHHHHHHHHHhC-C---cEEEEEEcCCchhHHH--HH--HHHHHH-HhhhhhhhCCCHHHHH-HHHH
Confidence 887 89999999999 3 8898888743322111 10 000100 0001123355778899 9999
Q ss_pred CCCceeEEEec
Q 043533 280 AVFSHYKITPI 290 (301)
Q Consensus 280 aGf~~~~~~~~ 290 (301)
+||+.+++...
T Consensus 168 aGF~~v~~~~~ 178 (261)
T 3ege_A 168 NTKRRVEAIPF 178 (261)
T ss_dssp HHCSEEEEEEC
T ss_pred cCCCceeEEEe
Confidence 99999988765
No 57
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.49 E-value=1.2e-13 Score=119.03 Aligned_cols=148 Identities=14% Similarity=0.245 Sum_probs=100.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~----- 213 (301)
+....+|||||||+|.++..+++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 344589999999999999999887 78999999 888887764 4689999999977 5555 887763
Q ss_pred ----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccc----hh-----------hhh------hhhhhchhhccc
Q 043533 214 ----------KILKKRREAIASNGERGKVIIIDIVINAEEEE----HE-----------LTE------TKFLFDIVMSVN 262 (301)
Q Consensus 214 ----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~----~~-----------~~~------~~~~~d~~~~~~ 262 (301)
.+|++++++|+| ||.+++ +...+..... .. +.. .....++.++..
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~p---gG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTD---GGKLLF-DVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE 183 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEE---EEEEEE-EEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCC---CeEEEE-EcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence 789999999999 787765 3321110000 00 000 000011111111
Q ss_pred c-CC-----------ccCCHHHHHHHHHhCCCceeEEEecC--------CceeEEEEeC
Q 043533 263 A-TG-----------KERTESEWAKLFFDAVFSHYKITPIF--------GMKSLIEVYP 301 (301)
Q Consensus 263 ~-~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~--------~~~~~i~a~~ 301 (301)
. +| +.++.+++.++|+++||+++++.... +...+++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 1 11 35799999999999999999987541 2456777765
No 58
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=3e-14 Score=122.62 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=94.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC-c-chhHHH------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP-P-ANAFLF------ 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p-~-~D~i~~------ 213 (301)
..+|||||||+|.++..+++ ++.+++++|+ +.+++.+++ ..+++++.+|+.+..+ . ||+|++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 35999999999999999976 5778999999 888887764 2569999999988333 3 998875
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeE
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 286 (301)
.+|++++++|+| ||++++.+.........+ ...++.++|.++|+++||++++
T Consensus 145 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKP---DGELITLMYPITDHVGGP------------------PYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEE---EEEEEEEECCCSCCCSCS------------------SCCCCHHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCC---CcEEEEEEecccccCCCC------------------CccCCHHHHHHHHHHcCCeEEE
Confidence 899999999999 899888776443222111 0125889999999999999999
Q ss_pred EEecC
Q 043533 287 ITPIF 291 (301)
Q Consensus 287 ~~~~~ 291 (301)
+...+
T Consensus 204 ~~~~~ 208 (235)
T 3lcc_A 204 VEENP 208 (235)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 88764
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.48 E-value=7.4e-14 Score=120.29 Aligned_cols=147 Identities=13% Similarity=0.084 Sum_probs=99.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH-------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF------- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~------- 213 (301)
...+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. ||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999988 468999999 888888775 2389999999977 5555 776654
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccch-----------h----hhh----hhhhhchhhccccC--
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEH-----------E----LTE----TKFLFDIVMSVNAT-- 264 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~-----------~----~~~----~~~~~d~~~~~~~~-- 264 (301)
.+|++++++|+| ||.+++ +...+...... . +.. .....++.++...+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~p---gG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKE---GGVFIF-DINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEF 190 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEE---EEEEEE-EEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSS
T ss_pred cCCHHHHHHHHHHHHHhcCC---CcEEEE-EecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCc
Confidence 789999999999 787765 33221100000 0 000 00001111111111
Q ss_pred ---------CccCCHHHHHHHHHhCCCceeEEEec--------CCceeEEEEeC
Q 043533 265 ---------GKERTESEWAKLFFDAVFSHYKITPI--------FGMKSLIEVYP 301 (301)
Q Consensus 265 ---------g~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~~i~a~~ 301 (301)
.+.++.++|.++|+++||+++++... .....+++|+|
T Consensus 191 ~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 191 YKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred ccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 24569999999999999999998754 12456777764
No 60
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.48 E-value=6.5e-14 Score=126.05 Aligned_cols=147 Identities=14% Similarity=0.142 Sum_probs=107.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCc
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIPP 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p~ 207 (301)
..++ +.++ .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +|.
T Consensus 80 ~~~~-~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 154 (318)
T 2fk8_A 80 DLNL-DKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAE 154 (318)
T ss_dssp HHHH-TTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCC
T ss_pred HHHH-HhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCC
Confidence 3455 5555 5667899999999999999999987 569999999 888887764 2679999999865 334
Q ss_pred -chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccch----hhh-hhhhhhchhh-ccccCCcc
Q 043533 208 -ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEH----ELT-ETKFLFDIVM-SVNATGKE 267 (301)
Q Consensus 208 -~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~----~~~-~~~~~~d~~~-~~~~~g~~ 267 (301)
||+|++ .+|++++++|+| ||++++.+...+...... +.. ......++.. ....++..
T Consensus 155 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T 2fk8_A 155 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA---DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRL 231 (318)
T ss_dssp CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT---TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred CcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC---CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcC
Confidence 898875 899999999999 999999888765532110 000 0000111111 11245667
Q ss_pred CCHHHHHHHHHhCCCceeEEEec
Q 043533 268 RTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 268 rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
++.+++.++++++||+++++...
T Consensus 232 ~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 232 PSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CCHHHHHHHHHHTTCBCCCCEEC
T ss_pred CCHHHHHHHHHhCCCEEEEEEec
Confidence 89999999999999999987664
No 61
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=1.4e-14 Score=129.29 Aligned_cols=140 Identities=12% Similarity=0.188 Sum_probs=94.5
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCC----------------------------
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEA---------------------------- 191 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~---------------------------- 191 (301)
+.+...+....+|||||||+|.++..+++++|..+++++|+ +.+++.|++.
T Consensus 38 ~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (292)
T 3g07_A 38 RVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGT 117 (292)
T ss_dssp GTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------
T ss_pred HhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccc
Confidence 44432234578999999999999999999999999999999 8887766531
Q ss_pred ------------------------------------CCeEEEeCCCCCCC------C-c-chhHHH--------------
Q 043533 192 ------------------------------------DNLKYIAGDMLRFI------P-P-ANAFLF-------------- 213 (301)
Q Consensus 192 ------------------------------------~ri~~~~~D~~~~~------p-~-~D~i~~-------------- 213 (301)
++|+|+.+|+.... + . ||+|++
T Consensus 118 ~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 118 TTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 58999999998622 2 2 888764
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHh--CCCceeEEE
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFD--AVFSHYKIT 288 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~--aGf~~~~~~ 288 (301)
++|++++++|+| ||.|++....... +........ .+...........+++.++|.+ +||+.+++.
T Consensus 198 ~~~~~l~~~~~~Lkp---GG~lil~~~~~~~------y~~~~~~~~-~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 198 GLKRMFRRIYRHLRP---GGILVLEPQPWSS------YGKRKTLTE-TIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEECCCHHH------HHTTTTSCH-HHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHHHHHHHHhCC---CcEEEEecCCchh------hhhhhcccH-HHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 689999999999 7766654221110 000000000 0000111223457899999999 999988876
Q ss_pred ec
Q 043533 289 PI 290 (301)
Q Consensus 289 ~~ 290 (301)
..
T Consensus 268 ~~ 269 (292)
T 3g07_A 268 AT 269 (292)
T ss_dssp --
T ss_pred cc
Confidence 55
No 62
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=5.5e-14 Score=121.45 Aligned_cols=125 Identities=12% Similarity=0.151 Sum_probs=98.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCc--chhHHH-----
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIPP--ANAFLF----- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p~--~D~i~~----- 213 (301)
...+|||||||+|.++..+++++ ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. ||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999999887 568999999 888887764 2368999999876 5543 898876
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
.+|++++++|+| ||++++.+...+. .. .++. ......++.++|.++|+++||+++
T Consensus 158 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~---~~-------~~~~----~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQE---GV-------ILDD----VDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBSS---SE-------EEET----TTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCC---CeEEEEEEccCCC---cc-------eecc----cCCcccCCHHHHHHHHHHcCCeEE
Confidence 789999999999 8999998876654 10 0110 012224589999999999999999
Q ss_pred EEEecC
Q 043533 286 KITPIF 291 (301)
Q Consensus 286 ~~~~~~ 291 (301)
++....
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 987664
No 63
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.45 E-value=2.3e-13 Score=114.61 Aligned_cols=123 Identities=11% Similarity=0.058 Sum_probs=99.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCCc-chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIPP-ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p~-~D~i~~----- 213 (301)
.....+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+..+. ||+|++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 35568999999999999999876 57779999999 888887764 23499999999875455 999887
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.+++++++.|+| ||++++.+.... +..++.++++++||+.+++...
T Consensus 137 ~~~~~l~~~~~~L~~---gG~l~~~~~~~~----------------------------~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 137 ILLDLIPQLDSHLNE---DGQVIFSGIDYL----------------------------QLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HHHHHGGGSGGGEEE---EEEEEEEEEEGG----------------------------GHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCC---CCEEEEEecCcc----------------------------cHHHHHHHHHHcCCceEEeecc
Confidence 789999999999 888887543211 3677889999999999999888
Q ss_pred CCceeEEEEeC
Q 043533 291 FGMKSLIEVYP 301 (301)
Q Consensus 291 ~~~~~~i~a~~ 301 (301)
..+..++.-+|
T Consensus 186 ~~w~~~~~~~~ 196 (205)
T 3grz_A 186 GRWIGLAISRK 196 (205)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEecc
Confidence 88888877654
No 64
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.45 E-value=1.5e-13 Score=120.80 Aligned_cols=149 Identities=9% Similarity=0.101 Sum_probs=103.1
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hH------HHhcCCC-------CCCeEEEeCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PH------AVANLPE-------ADNLKYIAGD 200 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~------~~~~a~~-------~~ri~~~~~D 200 (301)
..++ +.++ +....+|||||||+|.++..+++++ |+.+++++|+ +. +++.+++ .++++++.+|
T Consensus 33 ~~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 33 LAIA-EAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHH-HHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHH-HHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 3456 6665 6777899999999999999999995 8899999999 44 6766653 2689999998
Q ss_pred -CCC---CCCc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhh-hhhhchhh--c
Q 043533 201 -MLR---FIPP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTET-KFLFDIVM--S 260 (301)
Q Consensus 201 -~~~---~~p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~-~~~~d~~~--~ 260 (301)
+.. +++. ||+|++ .+++.++..++| ||++++.+...+...... .... .......+ .
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~---gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 185 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAV---CDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAI 185 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTT---CSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHH
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCC---CCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhc
Confidence 543 3343 999887 656666666677 899999998776543221 1000 00000000 0
Q ss_pred c--ccC--CccCCHHHHHHHHHhCCCceeEEEecC
Q 043533 261 V--NAT--GKERTESEWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 261 ~--~~~--g~~rt~~e~~~ll~~aGf~~~~~~~~~ 291 (301)
. ... ...++.+++.++++++||+++++..+.
T Consensus 186 ~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~ 220 (275)
T 3bkx_A 186 APSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVE 220 (275)
T ss_dssp SCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBC
T ss_pred cccccccccccCCHHHHHHHHHHCCCeeEEEEEec
Confidence 0 011 135799999999999999999887663
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.44 E-value=2e-13 Score=116.05 Aligned_cols=135 Identities=12% Similarity=0.027 Sum_probs=93.0
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEeCCCCC-CCC-
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A----DNLKYIAGDMLR-FIP- 206 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~----~ri~~~~~D~~~-~~p- 206 (301)
+.+. ..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++ . ++++++.+|+.. +.+
T Consensus 23 ~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 100 (219)
T 3jwg_A 23 AVLK--SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRF 100 (219)
T ss_dssp HHHH--HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGG
T ss_pred HHHh--hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccccc
Confidence 4444 45578999999999999999999999999999999 888888764 1 289999999965 443
Q ss_pred -cchhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHH
Q 043533 207 -PANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 272 (301)
Q Consensus 207 -~~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e 272 (301)
.||+|++ ++|++++++|+| ||.+++... .+.+.. + .......+........++.++
T Consensus 101 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~~i~~~~-~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~ 170 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLDENRLQAFEKVLFEFTRP---QTVIVSTPN-KEYNFH---Y---GNLFEGNLRHRDHRFEWTRKE 170 (219)
T ss_dssp TTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEB-GGGGGC---C---CCT-----GGGCCTTSBCHHH
T ss_pred CCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCC---CEEEEEccc-hhhhhh---h---cccCcccccccCceeeecHHH
Confidence 2999886 889999999999 774443332 111100 0 000000011111223468899
Q ss_pred HH----HHHHhCCCceeEE
Q 043533 273 WA----KLFFDAVFSHYKI 287 (301)
Q Consensus 273 ~~----~ll~~aGf~~~~~ 287 (301)
++ ++++++||++...
T Consensus 171 l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 171 FQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHCCcEEEEE
Confidence 98 7788999977554
No 66
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=1.8e-13 Score=115.72 Aligned_cols=125 Identities=12% Similarity=0.024 Sum_probs=95.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCc-chhHHH----------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPP-ANAFLF---------- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~-~D~i~~---------- 213 (301)
+....+|||||||+|.++..+++. +.+++++|+ +.+++.+++..+++++.+|+.. +.+. ||+|++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 455789999999999999999988 569999999 8888888764478888999877 5333 998876
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCC-CceeEEEe
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAV-FSHYKITP 289 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aG-f~~~~~~~ 289 (301)
.+|++++++|+| ||.+++........... .... ....++.++|.++|+++| |+++++..
T Consensus 119 ~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 119 ELADVLKLIWRALKP---GGLFYASYKSGEGEGRD--------KLAR------YYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEECCSSCEEC--------TTSC------EECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHhcCC---CcEEEEEEcCCCccccc--------ccch------hccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 899999999999 88888764322211110 0100 112469999999999999 99998875
Q ss_pred c
Q 043533 290 I 290 (301)
Q Consensus 290 ~ 290 (301)
.
T Consensus 182 ~ 182 (211)
T 3e23_A 182 S 182 (211)
T ss_dssp E
T ss_pred c
Confidence 4
No 67
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=4.8e-13 Score=113.87 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=92.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCc--chhHHH-----------H
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPP--ANAFLF-----------K 214 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~i~~-----------~ 214 (301)
..+|||||||+|.++..+++. +++|. +.+++.+++. +++++.+|+.+ +++. ||+|++ .
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH
Confidence 689999999999999988765 99999 8888877754 89999999977 6654 899887 8
Q ss_pred HHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 215 ILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 215 iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
+|++++++|+| ||.+++.+.... .. +...................++.++|.++|+++||+++++...
T Consensus 121 ~l~~~~~~L~p---gG~l~i~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 121 ALKEAYRILKK---GGYLIVGIVDRE-SF----LGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHEEE---EEEEEEEEECSS-SH----HHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHcCC---CcEEEEEEeCCc-cH----HHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 99999999999 888888765321 11 1010000100000012234679999999999999999988765
No 68
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.42 E-value=8.1e-13 Score=111.94 Aligned_cols=123 Identities=11% Similarity=0.110 Sum_probs=94.7
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCC-CCCc--chhH
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLR-FIPP--ANAF 211 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~i 211 (301)
...++ +.+. ......+|||||||+|.++..++ .+++++|+.+. +++++.+|+.+ +++. ||+|
T Consensus 55 ~~~~~-~~l~-~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v 119 (215)
T 2zfu_A 55 VDRIA-RDLR-QRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVA 119 (215)
T ss_dssp HHHHH-HHHH-TSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEE
T ss_pred HHHHH-HHHh-ccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEE
Confidence 34455 5554 13456899999999999998883 68999998433 67888999987 6654 8998
Q ss_pred HH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCC
Q 043533 212 LF----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAV 281 (301)
Q Consensus 212 ~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aG 281 (301)
++ .+|++++++|+| ||.+++.+... . ..+.+++.++++++|
T Consensus 120 ~~~~~l~~~~~~~~l~~~~~~L~~---gG~l~i~~~~~-------------~-------------~~~~~~~~~~l~~~G 170 (215)
T 2zfu_A 120 VFCLSLMGTNIRDFLEEANRVLKP---GGLLKVAEVSS-------------R-------------FEDVRTFLRAVTKLG 170 (215)
T ss_dssp EEESCCCSSCHHHHHHHHHHHEEE---EEEEEEEECGG-------------G-------------CSCHHHHHHHHHHTT
T ss_pred EEehhccccCHHHHHHHHHHhCCC---CeEEEEEEcCC-------------C-------------CCCHHHHHHHHHHCC
Confidence 87 899999999999 89998886321 0 118899999999999
Q ss_pred CceeEEEecCCceeEEEEeC
Q 043533 282 FSHYKITPIFGMKSLIEVYP 301 (301)
Q Consensus 282 f~~~~~~~~~~~~~~i~a~~ 301 (301)
|+++.+....+...+++++|
T Consensus 171 f~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 171 FKIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp EEEEEEECCSTTCEEEEEEE
T ss_pred CEEEEEecCCCeEEEEEEEe
Confidence 99998776666667777653
No 69
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.42 E-value=1.5e-13 Score=116.03 Aligned_cols=121 Identities=12% Similarity=0.056 Sum_probs=92.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------------------CCCeEEEeCCCCC-CCC
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------------------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------------------~~ri~~~~~D~~~-~~p 206 (301)
+....+|||||||+|..+..|+++ +.+++++|+ +.+++.|++ ..+++++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999998 569999999 888887753 2589999999987 543
Q ss_pred --c-chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCH
Q 043533 207 --P-ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTE 270 (301)
Q Consensus 207 --~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~ 270 (301)
. ||+|++ +++++++++|+| ||+++++....+..... ......+.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp---gG~~~l~~~~~~~~~~~-----------------~~~~~~~~ 157 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ---ACSGLLITLEYDQALLE-----------------GPPFSVPQ 157 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS---EEEEEEEEESSCSSSSS-----------------SCCCCCCH
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC---CcEEEEEEEecCccccC-----------------CCCCCCCH
Confidence 3 898873 689999999999 89855554332211000 00012588
Q ss_pred HHHHHHHHhCCCceeEEEec
Q 043533 271 SEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 271 ~e~~~ll~~aGf~~~~~~~~ 290 (301)
+|+.+++++ ||++..+...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHhcC-CcEEEEeccc
Confidence 999999999 9998877665
No 70
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.41 E-value=6e-13 Score=114.35 Aligned_cols=133 Identities=12% Similarity=0.074 Sum_probs=97.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC----CCCCeEEEeCCCCC-----CCCc-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP----EADNLKYIAGDMLR-----FIPP-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~----~~~ri~~~~~D~~~-----~~p~-~D~i~~-- 213 (301)
+.+..+|||||||+|.++..+++.+|..+++++|. +.+++.++ ..+++.++.+|+.+ +++. +|+|+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDV 151 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEECC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEec
Confidence 55678999999999999999999988889999999 77775443 35789999999875 2233 898875
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeE
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 286 (301)
.+|+++++.|+| ||.+++. .........+ . . . ....+++. +|+++||+.++
T Consensus 152 ~~~~~~~~~l~~~~~~Lkp---gG~l~i~-~~~~~~~~~~-----~--~--~--------~~~~~~l~-~l~~~Gf~~~~ 209 (230)
T 1fbn_A 152 AQPNQAEILIKNAKWFLKK---GGYGMIA-IKARSIDVTK-----D--P--K--------EIFKEQKE-ILEAGGFKIVD 209 (230)
T ss_dssp CSTTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCSSS-----C--H--H--------HHHHHHHH-HHHHHTEEEEE
T ss_pred CChhHHHHHHHHHHHhCCC---CcEEEEE-EecCCCCCCC-----C--H--H--------HhhHHHHH-HHHHCCCEEEE
Confidence 579999999999 8888887 2211111100 0 0 0 01136778 99999999999
Q ss_pred EEecCCc---eeEEEEeC
Q 043533 287 ITPIFGM---KSLIEVYP 301 (301)
Q Consensus 287 ~~~~~~~---~~~i~a~~ 301 (301)
+..+..+ +.++.+++
T Consensus 210 ~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 210 EVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp EEECTTTSTTEEEEEEEE
T ss_pred EEccCCCccceEEEEEEe
Confidence 8887543 67777653
No 71
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1.9e-12 Score=107.16 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=95.3
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc--chh
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP--ANA 210 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~--~D~ 210 (301)
..++ ..+ +....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++. +|+
T Consensus 37 ~~~l-~~~---~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 37 ARLI-DAM---APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHH-HHH---SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEE
T ss_pred HHHH-HHh---ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeE
Confidence 3455 444 356789999999999999999988 568999999 888887775 4679999999987 6653 887
Q ss_pred HHH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHH
Q 043533 211 FLF--------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 276 (301)
Q Consensus 211 i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~l 276 (301)
|++ .+|+++++.|+| ||.+++.... ...++.+++.++
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~---~G~l~~~~~~--------------------------~~~~~~~~~~~~ 161 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGA---DGRAVIGFGA--------------------------GRGWVFGDFLEV 161 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEET--------------------------TSSCCHHHHHHH
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCC---CCEEEEEeCC--------------------------CCCcCHHHHHHH
Confidence 765 789999999999 8887775321 012578999999
Q ss_pred HHhCCCceeEEEec
Q 043533 277 FFDAVFSHYKITPI 290 (301)
Q Consensus 277 l~~aGf~~~~~~~~ 290 (301)
++++||+++++...
T Consensus 162 l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 162 AERVGLELENAFES 175 (195)
T ss_dssp HHHHTEEEEEEESS
T ss_pred HHHcCCEEeeeecc
Confidence 99999999988654
No 72
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.41 E-value=4.9e-13 Score=123.35 Aligned_cols=195 Identities=9% Similarity=0.004 Sum_probs=125.6
Q ss_pred HHHhHHhcCCCCCHHHHHHhcCCCCCCce-----------eecCCCeEEcChhcc-hhhcCCCCChhhhhhhhcC-----
Q 043533 17 AQLYKLIHGRAITLSELVSALDIQPTKTT-----------VNGQEEAYGLTAAST-LLIKDKPYCLSPTVSVFVD----- 79 (301)
Q Consensus 17 l~lF~~L~~~p~t~~elA~~~~~~~~~l~-----------ve~~~~~y~~t~~s~-~L~~~~~~~l~~~~~~~~~----- 79 (301)
.++|..| .+|.|+.|||+.++++++.++ ++..++ |.+|+.+. +|...++.+..+.+.....
T Consensus 46 ~~ll~~L-~~~~t~~eLa~~~g~~~~~v~~~L~~l~~~gll~~~~~-~~lt~~~~~~l~~~~~~~~~~~~~~~~~g~g~~ 123 (373)
T 2qm3_A 46 ENVLSAV-LASDDIWRIVDLSEEPLPLVVAILESLNELGYVTFEDG-VKLTEKGEELVAEYGIGKRYDFTCPHCQGKTVD 123 (373)
T ss_dssp HHHHHHH-HHCSCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECSSS-SEECHHHHHHHHHHTCCCCCC------------
T ss_pred HHHHHHh-cCCCCHHHHHHHhCCChHHHHHHHHHHhhCCcEEECCC-EEECHHHHHHHHhcCccccccccchhhcCCCcc
Confidence 3889999 689999999999999999888 144445 99999876 6665333222111110000
Q ss_pred -ccchhhHHHHHhhhcCCCCchhHHhhCCChhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecC
Q 043533 80 -PFFVAPFQSLSSWFKGTELTLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGG 158 (301)
Q Consensus 80 -~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGg 158 (301)
..+...|..+.+.++... .+. ..|+.. .+...... ..++ ...........+|||||
T Consensus 124 ~~~~~~~~~~l~~~~~~~~-~~~------~~~~~~--~~~~~~~~------------~~~l-~~~~~~~~~~~~VLDlG- 180 (373)
T 2qm3_A 124 LQAFADLLEQFREIVKDRP-EPL------HEFDQA--YVTPETTV------------ARVI-LMHTRGDLENKDIFVLG- 180 (373)
T ss_dssp CGGGHHHHHHHHHHHTTCC-CCC------GGGTCC--CBCHHHHH------------HHHH-HHHHTTCSTTCEEEEES-
T ss_pred hhhhHHHHHHHHHHHhcCC-ccc------hhcCCe--ecCHHHHH------------HHHH-HHhhcCCCCCCEEEEEC-
Confidence 011224556666666442 111 011100 00001111 1111 11110122458999999
Q ss_pred CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-----cchhHHH----------HHH
Q 043533 159 GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP-----PANAFLF----------KIL 216 (301)
Q Consensus 159 G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p-----~~D~i~~----------~iL 216 (301)
|+|.++..+++.+|+.+++++|+ |.+++.|++ -+||+++.+|+.+++| .||+|++ .+|
T Consensus 181 G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l 260 (373)
T 2qm3_A 181 DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFV 260 (373)
T ss_dssp CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHHHHHHH
Confidence 99999999999999889999999 899988875 2389999999987443 2899887 789
Q ss_pred HHHHHhcccCCCCcEEEEEeeee
Q 043533 217 KKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 217 ~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
++++++|+| ||++++++...
T Consensus 261 ~~~~~~Lkp---gG~~~~~~~~~ 280 (373)
T 2qm3_A 261 GRGIATLKG---PRCAGYFGITR 280 (373)
T ss_dssp HHHHHTBCS---TTCEEEEEECT
T ss_pred HHHHHHccc---CCeEEEEEEec
Confidence 999999999 89887777643
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.41 E-value=1.1e-12 Score=110.36 Aligned_cols=113 Identities=16% Similarity=0.279 Sum_probs=91.5
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC---
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFI--- 205 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~--- 205 (301)
..++ ..++ .....+|||||||+|.++..+++.+|..+++++|+ +++++.+++ .++++++.+|+.+..
T Consensus 30 ~~~l-~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 30 AVTL-SKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHH-HHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS
T ss_pred HHHH-HHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC
Confidence 3355 5555 66778999999999999999999999999999999 888888775 378999999997643
Q ss_pred CcchhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHH
Q 043533 206 PPANAFLF--------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLF 277 (301)
Q Consensus 206 p~~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll 277 (301)
+.+|+|++ .+++++++.|+| ||++++...... +.+++.+++
T Consensus 107 ~~~D~i~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~----------------------------~~~~~~~~l 155 (204)
T 3e05_A 107 PDPDRVFIGGSGGMLEEIIDAVDRRLKS---EGVIVLNAVTLD----------------------------TLTKAVEFL 155 (204)
T ss_dssp CCCSEEEESCCTTCHHHHHHHHHHHCCT---TCEEEEEECBHH----------------------------HHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCC---CeEEEEEecccc----------------------------cHHHHHHHH
Confidence 33898887 899999999999 898887543110 345677888
Q ss_pred HhCCC
Q 043533 278 FDAVF 282 (301)
Q Consensus 278 ~~aGf 282 (301)
+++||
T Consensus 156 ~~~g~ 160 (204)
T 3e05_A 156 EDHGY 160 (204)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 99998
No 74
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.41 E-value=3.2e-13 Score=114.72 Aligned_cols=137 Identities=15% Similarity=0.055 Sum_probs=93.9
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEeCCCCC-C
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A----DNLKYIAGDMLR-F 204 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~----~ri~~~~~D~~~-~ 204 (301)
++ +.++ ..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++ . .+++++.+|+.. +
T Consensus 21 l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 21 VV-AALK--QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HH-HHHH--HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HH-HHHH--hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 44 4444 45678999999999999999999999899999999 888887764 1 289999999865 4
Q ss_pred CC--cchhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCC
Q 043533 205 IP--PANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERT 269 (301)
Q Consensus 205 ~p--~~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt 269 (301)
.+ .||+|++ ++|++++++|+| ||.+++... .+ ... .........+........++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~-~~---~~~---~~~~~~~~~~~~~~~~~~~~ 167 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQP---KIVIVTTPN-IE---YNV---KFANLPAGKLRHKDHRFEWT 167 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEB-HH---HHH---HTC-----------CCSCBC
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCC---CEEEEEccC-cc---cch---hhcccccccccccccccccC
Confidence 43 3999886 889999999999 785554433 11 000 00000000001111223568
Q ss_pred HHHHH----HHHHhCCCceeEE
Q 043533 270 ESEWA----KLFFDAVFSHYKI 287 (301)
Q Consensus 270 ~~e~~----~ll~~aGf~~~~~ 287 (301)
.+++. ++++++||++...
T Consensus 168 ~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 168 RSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHHHHHcCceEEEE
Confidence 99998 8889999987544
No 75
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.40 E-value=1.4e-12 Score=110.83 Aligned_cols=139 Identities=11% Similarity=0.062 Sum_probs=94.2
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhc----CCC------CCCeEEEeCCCCC-C
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVAN----LPE------ADNLKYIAGDMLR-F 204 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~----a~~------~~ri~~~~~D~~~-~ 204 (301)
..+ +.++ .....+|||||||+|.++..+++.+|+.+++++|+ +.+++. +++ .++++++.+|+.+ +
T Consensus 18 ~~~-~~l~--~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 18 AEF-EQLR--SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHH-HHHH--TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC
T ss_pred HHH-HHhh--ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC
Confidence 345 5555 56678999999999999999999999999999999 776654 221 3589999999987 6
Q ss_pred CC---c-chhHH-------------HHHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCcc
Q 043533 205 IP---P-ANAFL-------------FKILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKE 267 (301)
Q Consensus 205 ~p---~-~D~i~-------------~~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~ 267 (301)
++ + +++++ ..+|++++++|+| ||++++.-. ....... ...+.-.. .-...
T Consensus 95 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~-~~~~~~~--------~~~~~~~~-~~~~~ 161 (218)
T 3mq2_A 95 PLSGVGELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRP---GASFLVALN-LHAWRPS--------VPEVGEHP-EPTPD 161 (218)
T ss_dssp SCCCEEEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEE---EEEEEEEEE-GGGBTTB--------CGGGTTCC-CCCHH
T ss_pred CCCCCCEEEEEccchhhhhhhhccHHHHHHHHHHHcCC---CcEEEEEec-ccccccc--------ccccccCC-ccchH
Confidence 65 3 44333 1889999999999 887777322 1110000 00010000 00111
Q ss_pred CCHHHHHHHHHhCCCceeEEEecC
Q 043533 268 RTESEWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 268 rt~~e~~~ll~~aGf~~~~~~~~~ 291 (301)
...+++.++++++||++.++..+.
T Consensus 162 ~~~~~l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 162 SADEWLAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCceeeeccc
Confidence 234568899999999999887653
No 76
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.40 E-value=4.2e-13 Score=116.89 Aligned_cols=137 Identities=10% Similarity=0.050 Sum_probs=94.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc--chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP--ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~--~D~i~~---- 213 (301)
+....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 566789999999999999999987 578999999 888877653 4789999999977 6654 999887
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhh-hhhhhchhhccc-cCCccCCHHHHHHHHHhCCCce
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTE-TKFLFDIVMSVN-ATGKERTESEWAKLFFDAVFSH 284 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~-~~~~~d~~~~~~-~~g~~rt~~e~~~ll~~aGf~~ 284 (301)
.+|++++++|+| ||.+++. ...++......+.. ........-... .....++.+++.++|+++||++
T Consensus 115 ~~~~~~~~~l~~~~~~L~p---gG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKP---GGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEE---EEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred hhcCCHHHHHHHHHHHCCC---CcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 899999999999 8888877 22111111000000 001111100000 0112457899999999999998
Q ss_pred eEEEe
Q 043533 285 YKITP 289 (301)
Q Consensus 285 ~~~~~ 289 (301)
+.+..
T Consensus 191 ~~~~~ 195 (263)
T 2yqz_A 191 RTREV 195 (263)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 76543
No 77
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.39 E-value=6.6e-13 Score=116.28 Aligned_cols=88 Identities=14% Similarity=0.187 Sum_probs=78.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCc--chhHHH----------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPP--ANAFLF---------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~i~~---------- 213 (301)
+...+|||||||+|.++..|++.+ .+++++|+ +.+++.|++.++|+++.+|+.+ ++|+ +|+|++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 445799999999999999999886 47999999 9999999988999999999987 7775 999987
Q ss_pred HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 214 KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
+.+++++++|+| ||.|+++....+
T Consensus 116 ~~~~e~~rvLkp---gG~l~~~~~~~~ 139 (257)
T 4hg2_A 116 RFWAELRRVARP---GAVFAAVTYGLT 139 (257)
T ss_dssp HHHHHHHHHEEE---EEEEEEEEECCC
T ss_pred HHHHHHHHHcCC---CCEEEEEECCCC
Confidence 999999999999 899988876443
No 78
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.38 E-value=1.4e-12 Score=108.69 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=99.3
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCc
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p~ 207 (301)
..++ +.++ .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+.
T Consensus 22 ~~l~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 96 (199)
T 2xvm_A 22 SEVL-EAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDR 96 (199)
T ss_dssp HHHH-HHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCC
T ss_pred HHHH-HHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCC
Confidence 3456 6665 455679999999999999999988 569999999 888887764 2479999999987 5544
Q ss_pred -chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHH
Q 043533 208 -ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW 273 (301)
Q Consensus 208 -~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~ 273 (301)
||+|++ .+|++++++|+| ||.+++++.........+ ......++.+++
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~l 158 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKP---GGYNLIVAAMDTADYPCT---------------VGFPFAFKEGEL 158 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCC---------------SCCSCCBCTTHH
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCC---CeEEEEEEeeccCCcCCC---------------CCCCCccCHHHH
Confidence 898876 899999999999 899888887654432110 011224588899
Q ss_pred HHHHHhCCCceeEEEec
Q 043533 274 AKLFFDAVFSHYKITPI 290 (301)
Q Consensus 274 ~~ll~~aGf~~~~~~~~ 290 (301)
+++|++ |++++....
T Consensus 159 ~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 159 RRYYEG--WERVKYNED 173 (199)
T ss_dssp HHHTTT--SEEEEEECC
T ss_pred HHHhcC--CeEEEeccc
Confidence 999987 999887543
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.38 E-value=8.8e-13 Score=112.21 Aligned_cols=144 Identities=15% Similarity=0.174 Sum_probs=99.8
Q ss_pred chHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC---CCCc--
Q 043533 134 MTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR---FIPP-- 207 (301)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~---~~p~-- 207 (301)
....++ +.++ .+..+|||||||+|.++..+++. + .+++++|+ +.+++.+++. ..+++.+|+.+ +++.
T Consensus 21 ~~~~l~-~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 21 VNPNLL-KHIK---KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp CCHHHH-TTCC---TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTTC
T ss_pred HHHHHH-HHhc---cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCCc
Confidence 345566 5554 45689999999999999999988 4 89999999 8888877742 24788899875 3443
Q ss_pred chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhh-hhhhch---hhccccCCccCCHHH
Q 043533 208 ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTET-KFLFDI---VMSVNATGKERTESE 272 (301)
Q Consensus 208 ~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~-~~~~d~---~~~~~~~g~~rt~~e 272 (301)
||+|++ .+|+++++.|+| ||.+++.......... .... ...+.. ..........++.++
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYIKQ---NGVILASIPNVSHISV---LAPLLAGNWTYTEYGLLDKTHIRFFTFNE 167 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGEEE---EEEEEEEEECTTSHHH---HHHHHTTCCCCBSSSTTBTTCCCCCCHHH
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHcCC---CCEEEEEeCCcchHHH---HHHHhcCCceeccCCCCCcceEEEecHHH
Confidence 899886 899999999999 8888887643221100 0000 000000 000011224579999
Q ss_pred HHHHHHhCCCceeEEEec
Q 043533 273 WAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 273 ~~~ll~~aGf~~~~~~~~ 290 (301)
|.++++++||+++++...
T Consensus 168 ~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 168 MLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEEec
Confidence 999999999999988765
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=5.4e-13 Score=115.33 Aligned_cols=137 Identities=19% Similarity=0.193 Sum_probs=96.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCCc-------chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMLR-FIPP-------ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~ri~~~~~D~~~-~~p~-------~D~i~~- 213 (301)
.....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 45568999999999999999999988 8999999 888887764 4589999999987 3322 577765
Q ss_pred ------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhh----hhhhchhhccccCCccCCHHHHHHHH
Q 043533 214 ------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTET----KFLFDIVMSVNATGKERTESEWAKLF 277 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~----~~~~d~~~~~~~~g~~rt~~e~~~ll 277 (301)
.+|++++++|+| ||+++|++...++...-..+... .......+-.......++.+++.++|
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGK---QGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTT---TCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 899999999999 99999999854432110000000 00000000000111246899999999
Q ss_pred HhCCCceeEEEec
Q 043533 278 FDAVFSHYKITPI 290 (301)
Q Consensus 278 ~~aGf~~~~~~~~ 290 (301)
+||+++....+
T Consensus 209 --aGf~~~~~~~~ 219 (245)
T 3ggd_A 209 --PDFEILSQGEG 219 (245)
T ss_dssp --TTEEEEEEECC
T ss_pred --CCCEEEecccc
Confidence 99999876543
No 81
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.6e-12 Score=115.87 Aligned_cols=136 Identities=13% Similarity=0.056 Sum_probs=95.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC--------CCCeEEEeCCCCC-CCC-------c-c
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE--------ADNLKYIAGDMLR-FIP-------P-A 208 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~--------~~ri~~~~~D~~~-~~p-------~-~ 208 (301)
.+..+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++ .++++|+.+|+.+ +++ . |
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8999999999 888887764 4799999999987 432 3 8
Q ss_pred hhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc--ccCC-c-cCCHHHHH
Q 043533 209 NAFLF----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV--NATG-K-ERTESEWA 274 (301)
Q Consensus 209 D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~g-~-~rt~~e~~ 274 (301)
|+|++ .+|++++++|+| ||.+++.+...+.....+.. ...+.-.+.. ..+. - ....+.++
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~w~~p~~~~~~ 188 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRK---DGTIAIWGYADPIFPDYPEF---DDLMIEVPYGKQGLGPYWEQPGRSRLR 188 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEE---EEEEEEEEEEEEECTTCGGG---TTHHHHHHHCTTTTGGGSCTTHHHHHH
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCC---CcEEEEEecCCccccCcHHH---HHHHHHhccCcccccchhhchhhHHHH
Confidence 98887 899999999999 89988865433221111101 1111111000 0011 1 14566789
Q ss_pred HHHHhCCC-----ceeEEEe
Q 043533 275 KLFFDAVF-----SHYKITP 289 (301)
Q Consensus 275 ~ll~~aGf-----~~~~~~~ 289 (301)
++++++|| ..+++..
T Consensus 189 ~~l~~~gfp~~~f~~v~~~~ 208 (299)
T 3g5t_A 189 NMLKDSHLDPELFHDIQVSY 208 (299)
T ss_dssp TTTTTCCCCTTTEEEEEEEE
T ss_pred HhhhccCCChHHcCcceEEE
Confidence 99999999 5555443
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.34 E-value=6.5e-12 Score=108.86 Aligned_cols=82 Identities=21% Similarity=0.302 Sum_probs=69.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF------ 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~------ 213 (301)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchh
Confidence 45679999999999999999987 568999999 888887764 3479999999987 5555 898863
Q ss_pred --------HHHHHHHHhcccCCCCcEEEE
Q 043533 214 --------KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i 234 (301)
++|++++++|+| ||.+++
T Consensus 118 ~~~~~~~~~~l~~~~~~L~p---gG~li~ 143 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKP---GGVFIT 143 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCC---CeEEEE
Confidence 899999999999 776654
No 83
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=1.5e-12 Score=111.84 Aligned_cols=132 Identities=8% Similarity=0.014 Sum_probs=85.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec--hHHHhcC---CC------CCCeEEEeCCCCCCCCc--ch---hH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL--PHAVANL---PE------ADNLKYIAGDMLRFIPP--AN---AF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl--p~~~~~a---~~------~~ri~~~~~D~~~~~p~--~D---~i 211 (301)
....+|||||||+|.++..+++++|+.+++++|+ +.+++.| ++ .+++.|+.+|+.+ +|. +| .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~-l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES-LPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB-CCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH-hhhhccCeEEEE
Confidence 4567999999999999999999999999999999 4454444 43 3579999999865 232 23 22
Q ss_pred HH----------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHH
Q 043533 212 LF----------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAK 275 (301)
Q Consensus 212 ~~----------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ 275 (301)
.+ .+|++++++|+| ||++++....... ... .. ....+... ........+++.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~i~~~~~~~--~~~-~~--~~~~~~~~---~~~~~~~~~el~~ 170 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKK---EAHFEFVTTYSDS--YEE-AE--IKKRGLPL---LSKAYFLSEQYKA 170 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEE---EEEEEEEECCCC----------------------CCHHHHHSHHHHH
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCC---CcEEEEEEecccc--chh-ch--hhhcCCCC---CChhhcchHHHHH
Confidence 21 579999999999 8988884432222 110 00 00011100 0000112236999
Q ss_pred HHHhCCCceeEEEecC
Q 043533 276 LFFDAVFSHYKITPIF 291 (301)
Q Consensus 276 ll~~aGf~~~~~~~~~ 291 (301)
+++++||++..+....
T Consensus 171 ~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 171 ELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCCeeeeeecC
Confidence 9999999999887653
No 84
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.32 E-value=1.7e-11 Score=100.43 Aligned_cols=112 Identities=12% Similarity=0.158 Sum_probs=89.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCc--chhHHH-----------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIPP--ANAFLF----------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p~--~D~i~~----------- 213 (301)
....+|||||||+|.++..++++. +++++|+ +.+++. .++++++.+|+.++++. ||+|++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccc
Confidence 446799999999999999999987 9999999 888887 56899999999887663 898875
Q ss_pred ---------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCce
Q 043533 214 ---------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSH 284 (301)
Q Consensus 214 ---------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~ 284 (301)
.+++++.+.+ | ||.+++..... .+.+++.++++++||+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-p---gG~l~~~~~~~----------------------------~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-T---VGMLYLLVIEA----------------------------NRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-C---SSEEEEEEEGG----------------------------GCHHHHHHHHHHTTCEE
T ss_pred cccCCcchHHHHHHHHhhC-C---CCEEEEEEecC----------------------------CCHHHHHHHHHHCCCcE
Confidence 5788888888 8 89888876211 14567899999999999
Q ss_pred eEEEec-CCceeEE
Q 043533 285 YKITPI-FGMKSLI 297 (301)
Q Consensus 285 ~~~~~~-~~~~~~i 297 (301)
+.+... .++..++
T Consensus 144 ~~~~~~~~~~e~~~ 157 (170)
T 3q87_B 144 RILKVRKILGETVY 157 (170)
T ss_dssp EEEEEEECSSSEEE
T ss_pred EEEEeeccCCceEE
Confidence 988765 3443333
No 85
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.31 E-value=7.3e-12 Score=107.65 Aligned_cols=132 Identities=11% Similarity=0.076 Sum_probs=97.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCC----CCCCeEEEeCCCCCC--CC---c-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLP----EADNLKYIAGDMLRF--IP---P-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~----~~~ri~~~~~D~~~~--~p---~-~D~i~~- 213 (301)
+.++.+|||+|||+|.++..+++. .|+-+++++|+ |++++.++ +..++..+.+|...+ .+ . +|+|++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 677899999999999999999987 69999999999 88777554 357899999988763 22 2 787776
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
.+++++++.||| ||+++|.......+...+ . ....++-.+.|+++||+.+
T Consensus 155 ~~~~~~~~~~l~~~~r~LKp---GG~lvI~ik~r~~d~~~p--------~-----------~~~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 155 VAQPEQAAIVVRNARFFLRD---GGYMLMAIKARSIDVTTE--------P-----------SEVYKREIKTLMDGGLEIK 212 (233)
T ss_dssp CCCTTHHHHHHHHHHHHEEE---EEEEEEEEECCHHHHHTC--------C-----------CHHHHHHHHHHHHTTCCEE
T ss_pred ccCChhHHHHHHHHHHhccC---CCEEEEEEecccCCCCCC--------h-----------HHHHHHHHHHHHHCCCEEE
Confidence 789999999999 899888653222111110 0 0011234567899999999
Q ss_pred EEEecCC---ceeEEEEe
Q 043533 286 KITPIFG---MKSLIEVY 300 (301)
Q Consensus 286 ~~~~~~~---~~~~i~a~ 300 (301)
+...+.. .+.++.++
T Consensus 213 e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 213 DVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp EEEECTTTSTTEEEEEEC
T ss_pred EEEccCCCCCceEEEEEE
Confidence 9888743 46777665
No 86
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.31 E-value=3.4e-12 Score=106.94 Aligned_cols=120 Identities=8% Similarity=0.051 Sum_probs=91.9
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc--chhHHH---------
Q 043533 152 SLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP--ANAFLF--------- 213 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~--~D~i~~--------- 213 (301)
+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++. ||+|++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 109 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSL 109 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHH
Confidence 9999999999999999987 569999999 888887765 3489999999987 6653 898875
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.+|++++++|+| ||.+++.+......... .... ......++.+++.++|+ ||+++++...
T Consensus 110 ~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 110 RQQLYPKVYQGLKP---GGVFILEGFAPEQLQYN---------TGGP---KDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHHHHHHTTCCS---SEEEEEEEECTTTGGGT---------SCCS---SSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred HHHHHHHHHHhcCC---CcEEEEEEeccccccCC---------CCCC---CcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 899999999999 88888877643221100 0000 01123579999999999 9999987654
No 87
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.30 E-value=3.2e-12 Score=113.32 Aligned_cols=140 Identities=9% Similarity=-0.052 Sum_probs=96.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CC-Cc--chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FI-PP--ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~-p~--~D~i~~- 213 (301)
+....+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++ +. ||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 356789999999999999998876 4669999999 888887764 2579999999987 66 33 888764
Q ss_pred --------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCc-------cchhh-----------hh-hhhhhchhhc
Q 043533 214 --------------KILKKRREAIASNGERGKVIIIDIVINAEE-------EEHEL-----------TE-TKFLFDIVMS 260 (301)
Q Consensus 214 --------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~-------~~~~~-----------~~-~~~~~d~~~~ 260 (301)
.+|++++++|+| ||.+++......... ..+.. .. ....+.+.+.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRP---GGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEE---EEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 799999999999 888887764321100 00000 00 0000000000
Q ss_pred c---ccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 261 V---NATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 261 ~---~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
. ......++.++++++++++||+++++...
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 0 01124568999999999999999998765
No 88
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.29 E-value=1.3e-12 Score=113.65 Aligned_cols=95 Identities=12% Similarity=0.183 Sum_probs=81.2
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p 206 (301)
..++ ..++ .....+|||+|||+|.++..+++. +|..+++++|+ +++++.|++ .++++++.+|+.++++
T Consensus 83 ~~i~-~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (255)
T 3mb5_A 83 ALIV-AYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE 159 (255)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC
T ss_pred HHHH-HhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC
Confidence 3455 5555 667789999999999999999999 89999999999 888888774 4669999999988766
Q ss_pred c--chhHHH------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 P--ANAFLF------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 ~--~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. +|+|++ .+|++++++|+| ||++++..
T Consensus 160 ~~~~D~v~~~~~~~~~~l~~~~~~L~~---gG~l~~~~ 194 (255)
T 3mb5_A 160 EENVDHVILDLPQPERVVEHAAKALKP---GGFFVAYT 194 (255)
T ss_dssp CCSEEEEEECSSCGGGGHHHHHHHEEE---EEEEEEEE
T ss_pred CCCcCEEEECCCCHHHHHHHHHHHcCC---CCEEEEEE
Confidence 4 999998 799999999999 89888764
No 89
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.29 E-value=2.2e-12 Score=112.45 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=93.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CC-------------------------------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---AD------------------------------- 192 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~------------------------------- 192 (301)
.+..+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3457899999999999999998876 68999999 888877753 11
Q ss_pred -Ce-EEEeCCCCCC-C--C---c-chhHHH---------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhh
Q 043533 193 -NL-KYIAGDMLRF-I--P---P-ANAFLF---------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHEL 248 (301)
Q Consensus 193 -ri-~~~~~D~~~~-~--p---~-~D~i~~---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~ 248 (301)
++ +++.+|+.+. . + . ||+|++ .+|++++++|+| ||.+++.+.... ...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~-~~~---- 205 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP---GGFLVMVDALKS-SYY---- 205 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSC-CEE----
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC---CcEEEEEecCCC-ceE----
Confidence 28 9999999872 2 2 3 898765 789999999999 898888874221 110
Q ss_pred hhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecC
Q 043533 249 TETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIF 291 (301)
Q Consensus 249 ~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 291 (301)
..-+. .......+.+++.++|+++||+++++...+
T Consensus 206 ----~~~~~----~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 ----MIGEQ----KFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ----EETTE----EEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ----EcCCc----cccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00000 011234689999999999999999887654
No 90
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.29 E-value=3.8e-12 Score=113.24 Aligned_cols=131 Identities=12% Similarity=0.147 Sum_probs=85.7
Q ss_pred CCCeEEEecCCccHHHH----HHHHHCCCCeE--EEeec-hHHHhcCCC-------CCCeEE--EeCCCCC-C------C
Q 043533 149 GLGSLVDVGGGNVSFSR----IISEAFPGIKC--TVLDL-PHAVANLPE-------ADNLKY--IAGDMLR-F------I 205 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~----~l~~~~P~~~~--~~~Dl-p~~~~~a~~-------~~ri~~--~~~D~~~-~------~ 205 (301)
+..+|||||||+|.++. .++.++|+.++ +++|. ++|++.+++ .+++++ ..+|..+ + +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 34689999999997654 45566788855 99999 888887653 134544 4555432 2 2
Q ss_pred Cc--chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHH
Q 043533 206 PP--ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESE 272 (301)
Q Consensus 206 p~--~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e 272 (301)
+. ||+|++ +.|++++++|+| ||++++.+.. ++.. +......+.-.+-.......++.++
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp---gG~l~i~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGT---NAKMLIIVVS-GSSG----WDKLWKKYGSRFPQDDLCQYITSDD 203 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEE---EEEEEEEEEC-TTSH----HHHHHHHHGGGSCCCTTCCCCCHHH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCC---CcEEEEEEec-CCcc----HHHHHHHHHHhccCCCcccCCCHHH
Confidence 33 999987 899999999999 8999988643 1111 1111000100000001123578999
Q ss_pred HHHHHHhCCCceeEE
Q 043533 273 WAKLFFDAVFSHYKI 287 (301)
Q Consensus 273 ~~~ll~~aGf~~~~~ 287 (301)
|.++|+++||+.+..
T Consensus 204 ~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 204 LTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHCCCceEEE
Confidence 999999999998764
No 91
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.29 E-value=1.8e-12 Score=109.05 Aligned_cols=138 Identities=12% Similarity=0.009 Sum_probs=95.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc--chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP--ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~--~D~i~~---- 213 (301)
.....+|||||||+|.++..++.. ++.+++++|. +.+++.+++ ..+++++.+|+.+ +++. ||+|++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 455689999999999986555544 5679999999 888887764 4689999999987 6653 898875
Q ss_pred ---------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhch-hhccccCCccCCHHHHHHHHHhCCCc
Q 043533 214 ---------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDI-VMSVNATGKERTESEWAKLFFDAVFS 283 (301)
Q Consensus 214 ---------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~-~~~~~~~g~~rt~~e~~~ll~~aGf~ 283 (301)
++|++++++|+| ||.+++.+...++.............+.. .......+..++.+|+.++++++||.
T Consensus 100 ~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~ 176 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKP---GGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVL 176 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCC---CcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCce
Confidence 899999999999 89888887765443321000000000100 00000112456899999999999998
Q ss_pred eeEEE
Q 043533 284 HYKIT 288 (301)
Q Consensus 284 ~~~~~ 288 (301)
..+..
T Consensus 177 ~~~~~ 181 (209)
T 2p8j_A 177 FKEDR 181 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 77543
No 92
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.28 E-value=1.7e-12 Score=119.62 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=84.1
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------CCCeEEEeC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---------------ADNLKYIAG 199 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---------------~~ri~~~~~ 199 (301)
..++ +.+. +....+|||||||+|.+++.++..++..+++++|+ +.+++.|++ .++|+|+.|
T Consensus 163 ~~il-~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 163 AQMI-DEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHH-HHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 4455 5555 67788999999999999999999987767999999 666665542 378999999
Q ss_pred CCCC-CCC----cchhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCcc
Q 043533 200 DMLR-FIP----PANAFLF----------KILKKRREAIASNGERGKVIIIDIVINAEEE 244 (301)
Q Consensus 200 D~~~-~~p----~~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~ 244 (301)
|+++ +++ .+|+|++ +.|++++++|+| ||+|++.|.+.+++..
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKP---GGrIVssE~f~p~d~~ 296 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKE---GGRIVSSKPFAPLNFR 296 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCT---TCEEEESSCSSCTTCC
T ss_pred cccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCC---CcEEEEeecccCCCCC
Confidence 9998 553 3788764 888999999999 9999999998887643
No 93
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.28 E-value=1.7e-13 Score=118.51 Aligned_cols=122 Identities=15% Similarity=0.145 Sum_probs=84.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC---CCCc--chhHHH---
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR---FIPP--ANAFLF--- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~---~~p~--~D~i~~--- 213 (301)
..+.+|||||||+|..+..+++..|. +++++|+ |.+++.|++ ..++.++.+|+.. ++++ ||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 55689999999999999999988775 8999999 999998874 5678889888753 3554 776642
Q ss_pred -------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhC
Q 043533 214 -------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDA 280 (301)
Q Consensus 214 -------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~a 280 (301)
.++++++++||| ||++++++....... ....++.. .....+.+...|.++
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkP---GG~l~f~~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~~L~ea 200 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNLTSWGEL-------MKSKYSDI-------TIMFEETQVPALLEA 200 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCHHHHHHH-------TTTTCSCH-------HHHHHHHTHHHHHHH
T ss_pred ecccchhhhcchhhhhhhhhheeCC---CCEEEEEecCCchhh-------hhhhhhhh-------hhhhHHHHHHHHHHc
Confidence 789999999999 887766542211100 00111100 011244567788899
Q ss_pred CCceeEE
Q 043533 281 VFSHYKI 287 (301)
Q Consensus 281 Gf~~~~~ 287 (301)
||+...+
T Consensus 201 GF~~~~i 207 (236)
T 3orh_A 201 GFRRENI 207 (236)
T ss_dssp TCCGGGE
T ss_pred CCeEEEE
Confidence 9987644
No 94
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.28 E-value=5.9e-12 Score=109.92 Aligned_cols=120 Identities=5% Similarity=-0.019 Sum_probs=91.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------------------CCCeEEEeCCCCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------------------ADNLKYIAGDMLR 203 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------------------~~ri~~~~~D~~~ 203 (301)
....+|||||||+|..+..|++. +.+++++|+ +.+++.|++ ..+|+|+.+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 568999999 888887642 2579999999998
Q ss_pred -CCC--c-chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCc
Q 043533 204 -FIP--P-ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGK 266 (301)
Q Consensus 204 -~~p--~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~ 266 (301)
+.+ . ||+|+. .++++++++|+| ||+++++....+..... ....
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp---GG~l~l~~~~~~~~~~~-----------------g~~~ 204 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK---EFQYLVAVLSYDPTKHA-----------------GPPF 204 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE---EEEEEEEEEECCTTSCC-----------------CSSC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC---CeEEEEEEEecCCccCC-----------------CCCC
Confidence 543 3 998873 689999999999 89887666543321100 0001
Q ss_pred cCCHHHHHHHHHhCCCceeEEEec
Q 043533 267 ERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 267 ~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
..+.+|+.+++++ +|+++.+...
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEecc
Confidence 2589999999988 5998877654
No 95
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=1.6e-12 Score=111.21 Aligned_cols=109 Identities=8% Similarity=0.018 Sum_probs=87.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC--CCC-c--chhHHH-----HH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR--FIP-P--ANAFLF-----KI 215 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~--~~p-~--~D~i~~-----~i 215 (301)
....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ . ||+|++ .+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~ 124 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSV 124 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHH
Confidence 55689999999999999999998 579999999 888888875 6789999999965 454 3 999998 99
Q ss_pred HHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 216 LKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 216 L~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
|++++++|+| ||.++ .. +...+..++.++++++||+...+...
T Consensus 125 l~~~~~~Lkp---gG~l~----------~~-------------------~~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 125 ILRLPELAAP---DAHFL----------YV-------------------GPRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp GGGHHHHEEE---EEEEE----------EE-------------------ESSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHcCC---CcEEE----------Ee-------------------CCcCCHHHHHHHHHHCCCeEEEEEee
Confidence 9999999999 88777 00 00123456788888888888776543
No 96
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.28 E-value=6.5e-12 Score=109.68 Aligned_cols=117 Identities=14% Similarity=0.178 Sum_probs=93.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCCc--chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIPP--ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p~--~D~i~~----- 213 (301)
..+..+|||+|||+|.+++.+++..+ +++++|+ |.+++.+++ .-.+++..+|+.++++. ||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 35568999999999999999998866 9999999 888887764 11289999998765533 898876
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.+++++++.|+| ||++++.+... .+.+++.++++++||+.+++...
T Consensus 196 ~~~~~l~~~~~~Lkp---gG~lils~~~~----------------------------~~~~~v~~~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 196 LHAALAPRYREALVP---GGRALLTGILK----------------------------DRAPLVREAMAGAGFRPLEEAAE 244 (254)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEEEG----------------------------GGHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHcCC---CCEEEEEeecc----------------------------CCHHHHHHHHHHCCCEEEEEecc
Confidence 889999999999 88888764321 02678899999999999998887
Q ss_pred CCceeE
Q 043533 291 FGMKSL 296 (301)
Q Consensus 291 ~~~~~~ 296 (301)
..+..+
T Consensus 245 ~~W~~l 250 (254)
T 2nxc_A 245 GEWVLL 250 (254)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 665544
No 97
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.28 E-value=9.1e-12 Score=109.91 Aligned_cols=122 Identities=15% Similarity=0.182 Sum_probs=95.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-c-chhHHH-----
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP-P-ANAFLF----- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p-~-~D~i~~----- 213 (301)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|++++++ . ||+|++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3467999999999999999999999999999999 888887764 2579999999987553 3 777653
Q ss_pred -------------------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccc
Q 043533 214 -------------------------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVN 262 (301)
Q Consensus 214 -------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 262 (301)
.+++++++.|+| ||.+++.. .
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp---gG~l~~~~--------~----------------- 239 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS---GGFLLLEH--------G----------------- 239 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE---EEEEEEEC--------C-----------------
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC---CCEEEEEE--------C-----------------
Confidence 678899999999 77666531 0
Q ss_pred cCCccCCHHHHHHHHHhCCCceeEEEe-cCCceeEEEEeC
Q 043533 263 ATGKERTESEWAKLFFDAVFSHYKITP-IFGMKSLIEVYP 301 (301)
Q Consensus 263 ~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~a~~ 301 (301)
..+.+++.++++++||+.+++.. ..+...++.+++
T Consensus 240 ----~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 ----WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ----SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ----chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 12467889999999999887765 456666666653
No 98
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.27 E-value=2.3e-12 Score=114.31 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=74.3
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLR- 203 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~- 203 (301)
+.+. +.++ ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..++.+..+|+.+
T Consensus 47 ~~l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 121 (293)
T 3thr_A 47 AWLL-GLLR--QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 121 (293)
T ss_dssp HHHH-HHHH--HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH
T ss_pred HHHH-HHhc--ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC
Confidence 4445 5555 4567899999999999999999984 49999999 888887753 2578899999877
Q ss_pred C---CCc--chhHHH-------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 204 F---IPP--ANAFLF-------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 204 ~---~p~--~D~i~~-------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+ ++. ||+|++ ++|++++++|+| ||.+++...
T Consensus 122 ~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 176 (293)
T 3thr_A 122 DKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP---GGLLVIDHR 176 (293)
T ss_dssp HHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred ccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC---CeEEEEEeC
Confidence 5 443 887753 689999999999 888877654
No 99
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=3.8e-12 Score=112.31 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=77.4
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC----C---CCeEEEeCCCCCCCCc
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE----A---DNLKYIAGDMLRFIPP 207 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~----~---~ri~~~~~D~~~~~p~ 207 (301)
.++ +.++ +.+..+|||+|||+|.++..+++. +|..+++++|+ +.+++.+++ . ++++++.+|+.++++.
T Consensus 101 ~~~-~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 177 (275)
T 1yb2_A 101 YII-MRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD 177 (275)
T ss_dssp ------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS
T ss_pred HHH-HHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC
Confidence 455 5555 667789999999999999999998 88999999999 888876653 2 5899999999886664
Q ss_pred --chhHHH------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 208 --ANAFLF------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 208 --~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
||+|++ .+|++++++|+| ||++++..
T Consensus 178 ~~fD~Vi~~~~~~~~~l~~~~~~Lkp---gG~l~i~~ 211 (275)
T 1yb2_A 178 QMYDAVIADIPDPWNHVQKIASMMKP---GSVATFYL 211 (275)
T ss_dssp CCEEEEEECCSCGGGSHHHHHHTEEE---EEEEEEEE
T ss_pred CCccEEEEcCcCHHHHHHHHHHHcCC---CCEEEEEe
Confidence 999998 899999999999 89888876
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.26 E-value=2.1e-11 Score=103.49 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=91.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHH----hcCCCCCCeEEEeCCCCCC-----CCc-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAV----ANLPEADNLKYIAGDMLRF-----IPP-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~----~~a~~~~ri~~~~~D~~~~-----~p~-~D~i~~-- 213 (301)
+.+..+|||||||+|.++..+++..++.+++++|+ |.++ +.++...++.++.+|+..+ ++. +|+|++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 45678999999999999999999988779999999 6543 4444356899999998763 234 899887
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHH----HHHHHhCCC
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEW----AKLFFDAVF 282 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~----~~ll~~aGf 282 (301)
.+|++++++|+| ||++++.-... . .+.. .+.+++ .+.++++ |
T Consensus 135 ~~~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~---~-----------~~~~---------~~~~~~~~~~~~~l~~~-f 187 (210)
T 1nt2_A 135 AQKNQIEILKANAEFFLKE---KGEVVIMVKAR---S-----------IDST---------AEPEEVFKSVLKEMEGD-F 187 (210)
T ss_dssp CSTTHHHHHHHHHHHHEEE---EEEEEEEEEHH---H-----------HCTT---------SCHHHHHHHHHHHHHTT-S
T ss_pred cChhHHHHHHHHHHHHhCC---CCEEEEEEecC---C-----------cccc---------CCHHHHHHHHHHHHHhh-c
Confidence 358999999999 89888873211 0 0100 112222 1238888 9
Q ss_pred ceeEEEecCC---ceeEEEEeC
Q 043533 283 SHYKITPIFG---MKSLIEVYP 301 (301)
Q Consensus 283 ~~~~~~~~~~---~~~~i~a~~ 301 (301)
++++...... .+.++.+++
T Consensus 188 ~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 188 KIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp EEEEEEECTTTCTTEEEEEEEE
T ss_pred EEeeeecCCCCCCCcEEEEEEc
Confidence 9999887732 567777764
No 101
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.25 E-value=1.4e-12 Score=114.48 Aligned_cols=126 Identities=14% Similarity=0.114 Sum_probs=87.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C-------------------------------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----A------------------------------- 191 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~------------------------------- 191 (301)
.+..+|||||||+|.++..+++..- .+++++|+ +.+++.|++ .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 3457899999999988776665432 26999999 888886542 0
Q ss_pred CCeE-EEeCCCCCC--C-----CcchhHHH---------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhh
Q 043533 192 DNLK-YIAGDMLRF--I-----PPANAFLF---------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHEL 248 (301)
Q Consensus 192 ~ri~-~~~~D~~~~--~-----p~~D~i~~---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~ 248 (301)
.+|. ++.+|+.++ + +.||+|++ ++|++++++||| ||.+++.+... .....
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP---GG~li~~~~~~-~~~~~--- 205 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP---GGHLVTTVTLR-LPSYM--- 205 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESS-CCEEE---
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC---CcEEEEEEeec-Cccce---
Confidence 1244 889999872 2 23898776 679999999999 89888876432 11110
Q ss_pred hhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 249 TETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 249 ~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
..-. .......+.+++.++|+++||+++++...
T Consensus 206 ------~g~~---~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 206 ------VGKR---EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp ------ETTE---EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------eCCe---EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0000 01122458999999999999999988764
No 102
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.23 E-value=2.7e-11 Score=107.14 Aligned_cols=128 Identities=20% Similarity=0.163 Sum_probs=96.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~- 207 (301)
..++ +.++ .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+.
T Consensus 110 ~~~~-~~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 110 GDVV-DAAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQEN 184 (286)
T ss_dssp HHHH-HHHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSC
T ss_pred HHHH-HHhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCC
Confidence 4466 6665 456789999999999999999998 569999999 888887764 2389999999987 4554
Q ss_pred chhHHH-------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHH
Q 043533 208 ANAFLF-------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 274 (301)
Q Consensus 208 ~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~ 274 (301)
||+|++ .+|+++++.|+| ||.++++.....+....+ ......++.++++
T Consensus 185 fD~i~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~l~ 246 (286)
T 3m70_A 185 YDFIVSTVVFMFLNRERVPSIIKNMKEHTNV---GGYNLIVAAMSTDDVPCP---------------LPFSFTFAENELK 246 (286)
T ss_dssp EEEEEECSSGGGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCS---------------SCCSCCBCTTHHH
T ss_pred ccEEEEccchhhCCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCCCCCC---------------CCccccCCHHHHH
Confidence 998876 899999999999 898787766444322110 0111245678888
Q ss_pred HHHHhCCCceeEEE
Q 043533 275 KLFFDAVFSHYKIT 288 (301)
Q Consensus 275 ~ll~~aGf~~~~~~ 288 (301)
++++. |+++...
T Consensus 247 ~~~~~--~~~~~~~ 258 (286)
T 3m70_A 247 EYYKD--WEFLEYN 258 (286)
T ss_dssp HHTTT--SEEEEEE
T ss_pred HHhcC--CEEEEEE
Confidence 88865 8887764
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.23 E-value=1e-11 Score=107.21 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=90.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC----Cc-chhHHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI----PP-ANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~----p~-~D~i~~ 213 (301)
+.+..+|||||||+|.++..++...|+.+++++|+ +.+++.+++ .++|+++.+|+.+ +. +. ||+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 34678999999999999999999999999999999 888887764 2479999999866 43 23 999987
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeE
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 286 (301)
.+++++++.|+| ||.+++.... ... . ...++.+.++++||+..+
T Consensus 148 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~g~----~~~-------~---------------~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 148 RAVARLSVLSELCLPLVKK---NGLFVALKAA----SAE-------E---------------ELNAGKKAITTLGGELEN 198 (240)
T ss_dssp ECCSCHHHHHHHHGGGEEE---EEEEEEEECC-----CH-------H---------------HHHHHHHHHHHTTEEEEE
T ss_pred eccCCHHHHHHHHHHhcCC---CCEEEEEeCC----Cch-------H---------------HHHHHHHHHHHcCCeEeE
Confidence 999999999999 8888775210 000 0 124677889999999988
Q ss_pred EEec
Q 043533 287 ITPI 290 (301)
Q Consensus 287 ~~~~ 290 (301)
+...
T Consensus 199 ~~~~ 202 (240)
T 1xdz_A 199 IHSF 202 (240)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7643
No 104
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.23 E-value=2.1e-11 Score=104.29 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=94.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC---cchhHHH---
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP---PANAFLF--- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p---~~D~i~~--- 213 (301)
++..+|+|||||+|.+++.+++.+|..+++++|+ |.+++.|++ .++|++..+|.+++++ .+|+|++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4457999999999999999999999999999999 888888775 4689999999998665 2897764
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEE
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKI 287 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 287 (301)
.||..+.+.|++ +|++++ ... . .....+++|.+.||.+++.
T Consensus 94 Gg~~i~~Il~~~~~~L~~---~~~lVl-q~~---~--------------------------~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 94 GGRLIARILEEGLGKLAN---VERLIL-QPN---N--------------------------REDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CHHHHHHHHHHTGGGCTT---CCEEEE-EES---S--------------------------CHHHHHHHHHHTTEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCC---CCEEEE-ECC---C--------------------------CHHHHHHHHHHCCCEEEEE
Confidence 888888889998 676555 332 0 1334588999999999876
Q ss_pred Eec--CC-ceeEEEEe
Q 043533 288 TPI--FG-MKSLIEVY 300 (301)
Q Consensus 288 ~~~--~~-~~~~i~a~ 300 (301)
.-+ .+ ++.+|.+.
T Consensus 141 ~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 141 SILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEEE
Confidence 543 23 57777765
No 105
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.23 E-value=9.4e-11 Score=100.07 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=94.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcC----CCCCCeEEEeCCCCCC-----CCc-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANL----PEADNLKYIAGDMLRF-----IPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a----~~~~ri~~~~~D~~~~-----~p~-~D~i~~- 213 (301)
+.+..+|||+|||+|.++..+++.. |+.+++++|. +.+++.+ +..++++++.+|+.++ .+. +|+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4567899999999999999999884 6789999999 7555443 3357899999999762 234 899887
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
.+++++++.|+| ||.+++. .........+ ... ....+++.++ +++ |+.+
T Consensus 151 ~~~~~~~~~~l~~~~~~Lkp---gG~l~~~-~~~~~~~~~~---------~~~--------~~~~~~l~~l-~~~-f~~~ 207 (227)
T 1g8a_A 151 VAQPTQAKILIDNAEVYLKR---GGYGMIA-VKSRSIDVTK---------EPE--------QVFREVEREL-SEY-FEVI 207 (227)
T ss_dssp CCSTTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCTTS---------CHH--------HHHHHHHHHH-HTT-SEEE
T ss_pred CCCHhHHHHHHHHHHHhcCC---CCEEEEE-EecCCCCCCC---------Chh--------hhhHHHHHHH-Hhh-ceee
Confidence 349999999999 8888887 2211111000 000 1236677887 777 9999
Q ss_pred EEEecCCc---eeEEEEeC
Q 043533 286 KITPIFGM---KSLIEVYP 301 (301)
Q Consensus 286 ~~~~~~~~---~~~i~a~~ 301 (301)
+...+... +.++.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 208 ERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEEECTTTSSSEEEEEEEC
T ss_pred eEeccCcccCCCEEEEEEe
Confidence 98877543 67777664
No 106
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.22 E-value=7.6e-13 Score=115.21 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=91.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCC----CCCC----c-chhH
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDML----RFIP----P-ANAF 211 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~----~~~p----~-~D~i 211 (301)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ .++++++.+|+. ++++ . ||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 467999999999999999999988999999999 888887764 357999999953 3444 3 8887
Q ss_pred HH-------H-------------------HHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCC
Q 043533 212 LF-------K-------------------ILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATG 265 (301)
Q Consensus 212 ~~-------~-------------------iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g 265 (301)
++ . ++.+++++|+| ||++.+++.+..... .......++....+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp---gG~l~~~~~~~~~~~--------~~l~~~g~~~~~~~ 213 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE---GGELEFVKRIIHDSL--------QLKKRLRWYSCMLG 213 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH---HTHHHHHHHHHHHHH--------HHGGGBSCEEEEES
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec---CCEEEEEHHHHHHHH--------hcccceEEEEECCC
Confidence 76 1 34567788888 888877765432110 00111111111224
Q ss_pred ccCCHHHHHHHHHhCCCceeEEEec
Q 043533 266 KERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 266 ~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
...+.+++.++++++||+.+++...
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 4455689999999999999988766
No 107
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=106.29 Aligned_cols=132 Identities=9% Similarity=0.058 Sum_probs=92.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHH----HhcCCCCCCeEEEeCCCCCC--CC---c-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHA----VANLPEADNLKYIAGDMLRF--IP---P-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~----~~~a~~~~ri~~~~~D~~~~--~p---~-~D~i~~- 213 (301)
+....+|||||||+|.++..+++.+ |+.+++++|+ +.+ ++.++..++++++.+|+.++ +| . +|+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 5567899999999999999999986 7889999999 554 44444357899999999872 22 2 899887
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
.+++++++.|+| ||.+++ .......... ..... +-..+ .++|+++||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~Lkp---gG~l~i-~~~~~~~~~~---------~~~~~--------~~~~~-~~~l~~~Gf~~~ 212 (233)
T 2ipx_A 155 VAQPDQTRIVALNAHTFLRN---GGHFVI-SIKANCIDST---------ASAEA--------VFASE-VKKMQQENMKPQ 212 (233)
T ss_dssp CCCTTHHHHHHHHHHHHEEE---EEEEEE-EEEHHHHCSS---------SCHHH--------HHHHH-HHTTGGGTEEEE
T ss_pred CCCccHHHHHHHHHHHHcCC---CeEEEE-EEcccccccC---------CCHHH--------HHHHH-HHHHHHCCCceE
Confidence 458999999999 787777 3321100000 00000 00123 588999999999
Q ss_pred EEEecCC---ceeEEEEe
Q 043533 286 KITPIFG---MKSLIEVY 300 (301)
Q Consensus 286 ~~~~~~~---~~~~i~a~ 300 (301)
++..+.. .+.++.++
T Consensus 213 ~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 213 EQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp EEEECTTTSSSEEEEEEE
T ss_pred EEEecCCccCCcEEEEEE
Confidence 9777643 36666654
No 108
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.21 E-value=1.1e-11 Score=109.87 Aligned_cols=87 Identities=16% Similarity=0.309 Sum_probs=75.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCcchhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIPPANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p~~D~i~~----- 213 (301)
+....+|||||||+|.++..++.+.++.+++++|+ |++++.|++ .++|+|+.+|+.+ +-..||+|++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~ 199 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAE 199 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCS
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCcc
Confidence 56789999999999988877777778999999999 999998875 3799999999976 4223999986
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 ---KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
+++++++++|+| ||++++.+
T Consensus 200 d~~~~l~el~r~LkP---GG~Lvv~~ 222 (298)
T 3fpf_A 200 PKRRVFRNIHRYVDT---ETRIIYRT 222 (298)
T ss_dssp CHHHHHHHHHHHCCT---TCEEEEEE
T ss_pred CHHHHHHHHHHHcCC---CcEEEEEc
Confidence 899999999999 99998876
No 109
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.21 E-value=4.2e-11 Score=105.93 Aligned_cols=114 Identities=14% Similarity=0.024 Sum_probs=91.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~--- 213 (301)
..+..+|||+|||+|.++..+++..+. +++++|+ |.+++.|++ .++++++.+|+++ +.+. ||+|++
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 345789999999999999999999877 8999999 888887764 4579999999988 3344 999988
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeE
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 286 (301)
.+++++.++|+| ||.+++.+....... .....+++.++++++||+...
T Consensus 202 ~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 VRTHEFIPKALSIAKD---GAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp SSGGGGHHHHHHHEEE---EEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHHHHHCCC---CeEEEEEEeeccccc----------------------cccHHHHHHHHHHHcCCeeEE
Confidence 899999999999 888887776431100 012467788999999999876
No 110
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.21 E-value=1.9e-11 Score=106.18 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=80.5
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p 206 (301)
.++ ..++ +....+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 87 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 87 AMV-TLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHH-HHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 455 5555 667789999999999999999998 78899999999 888877764 2689999999987 476
Q ss_pred c--chhHHH------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 P--ANAFLF------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 ~--~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. +|+|++ .+|++++++|+| ||++++..
T Consensus 164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~---gG~l~~~~ 198 (258)
T 2pwy_A 164 EAAYDGVALDLMEPWKVLEKAALALKP---DRFLVAYL 198 (258)
T ss_dssp TTCEEEEEEESSCGGGGHHHHHHHEEE---EEEEEEEE
T ss_pred CCCcCEEEECCcCHHHHHHHHHHhCCC---CCEEEEEe
Confidence 4 999998 899999999999 89888876
No 111
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.20 E-value=2.7e-12 Score=108.00 Aligned_cols=132 Identities=19% Similarity=0.207 Sum_probs=84.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC---
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIP--- 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p--- 206 (301)
..++ +.+. ......+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.++++
T Consensus 19 ~~~~-~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 96 (215)
T 4dzr_A 19 EEAI-RFLK-RMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERA 96 (215)
T ss_dssp HHHH-HHHT-TCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHH
T ss_pred HHHH-HHhh-hcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhh
Confidence 3345 4444 125678999999999999999999999999999999 889988875 1268888888876432
Q ss_pred ---c-chhHHH-------------------------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccc
Q 043533 207 ---P-ANAFLF-------------------------------------KILKKRREAIASNGERGKVIIIDIVINAEEEE 245 (301)
Q Consensus 207 ---~-~D~i~~-------------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~ 245 (301)
. ||+|++ .+++++++.|+| ||.+++++..
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~------- 166 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR---GRAGVFLEVG------- 166 (215)
T ss_dssp HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCS---SSEEEEEECT-------
T ss_pred hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC---CCeEEEEEEC-------
Confidence 3 787764 456777888898 8885665431
Q ss_pred hhhhhhhhhhchhhccccCCccCCHHHHHHHHH--hCCCceeEEEec-CCceeEEEEe
Q 043533 246 HELTETKFLFDIVMSVNATGKERTESEWAKLFF--DAVFSHYKITPI-FGMKSLIEVY 300 (301)
Q Consensus 246 ~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~-~~~~~~i~a~ 300 (301)
....+++.++++ ++||..+++... .+...++.++
T Consensus 167 ---------------------~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 167 ---------------------HNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp ---------------------TSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred ---------------------CccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 012455677778 888888877654 3444555443
No 112
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.20 E-value=4.1e-11 Score=102.70 Aligned_cols=120 Identities=9% Similarity=0.025 Sum_probs=94.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC-C--cchhHHH---
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFI-P--PANAFLF--- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~-p--~~D~i~~--- 213 (301)
++..+|+|||||+|.+++.+++.+|..+++++|+ |.+++.|++ .+||++..+|.++.+ | .+|+|++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4457999999999999999999999999999999 888888875 578999999999854 3 2898764
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEE
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKI 287 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 287 (301)
.||....+.|++ +|++++.-. . ...++++||.+.||.+++.
T Consensus 100 Gg~lI~~IL~~~~~~l~~---~~~lIlqp~-~-----------------------------~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 100 GGRLIADILNNDIDKLQH---VKTLVLQPN-N-----------------------------REDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp CHHHHHHHHHHTGGGGTT---CCEEEEEES-S-----------------------------CHHHHHHHHHHTTEEEEEE
T ss_pred chHHHHHHHHHHHHHhCc---CCEEEEECC-C-----------------------------ChHHHHHHHHHCCCEEEEE
Confidence 888888888887 675554321 0 1455689999999999986
Q ss_pred Eec---CCceeEEEEe
Q 043533 288 TPI---FGMKSLIEVY 300 (301)
Q Consensus 288 ~~~---~~~~~~i~a~ 300 (301)
.-+ .-++.+|.+.
T Consensus 147 ~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 147 DILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEC--CEEEEEEEE
T ss_pred EEEEECCEEEEEEEEE
Confidence 654 2367888775
No 113
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.19 E-value=5.2e-11 Score=104.01 Aligned_cols=121 Identities=14% Similarity=0.199 Sum_probs=93.1
Q ss_pred cc-CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C--CC-c-chhHH
Q 043533 147 FE-GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-F--IP-P-ANAFL 212 (301)
Q Consensus 147 ~~-~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~--~p-~-~D~i~ 212 (301)
.. +..+|||+|||+|.++..++++.+. +++++|+ +.+++.|++ .+|++++.+|+.+ + ++ . ||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 55 6789999999999999999999876 9999999 888887764 4689999999987 3 33 3 88877
Q ss_pred H-------------------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc
Q 043533 213 F-------------------------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV 261 (301)
Q Consensus 213 ~-------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~ 261 (301)
+ .+++++.+.|+| ||+++++- +.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~---~~-------------------- 178 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFVH---RP-------------------- 178 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEEE---CT--------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEEE---cH--------------------
Confidence 6 389999999999 88888741 11
Q ss_pred ccCCccCCHHHHHHHHHhCCCceeEEEecC------CceeEEEEe
Q 043533 262 NATGKERTESEWAKLFFDAVFSHYKITPIF------GMKSLIEVY 300 (301)
Q Consensus 262 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~------~~~~~i~a~ 300 (301)
....++.+++++.||...++..+. ....+++++
T Consensus 179 ------~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 179 ------ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGI 217 (259)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEE
Confidence 123456778888899888776651 235666665
No 114
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.18 E-value=1.7e-11 Score=114.44 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=95.9
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC------CCC-
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR------FIP- 206 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~------~~p- 206 (301)
+..++ +.+. .....+|||||||+|.++..++++ +.+++++|+ +.+++.+++. .+......+.. +++
T Consensus 96 ~~~l~-~~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 96 ARDFL-ATEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHH-HTTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHH
T ss_pred HHHHH-HHhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCC
Confidence 44566 6665 566789999999999999999987 458999999 8888888753 33333322211 222
Q ss_pred c-chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHH
Q 043533 207 P-ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWA 274 (301)
Q Consensus 207 ~-~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~ 274 (301)
. ||+|++ .+|++++++|+| ||.+++....... +.. ...++... ......++.++|.
T Consensus 170 ~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lkp---gG~l~i~~~~~~~------~~~-~~~~~~~~--~~~~~~~s~~~l~ 237 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPYVQSVLEGVDALLAP---DGVFVFEDPYLGD------IVA-KTSFDQIF--DEHFFLFSATSVQ 237 (416)
T ss_dssp CCEEEEEEESCGGGCTTHHHHHHHHHHHEEE---EEEEEEEEECHHH------HHH-HTCGGGCS--TTCCEECCHHHHH
T ss_pred CCEEEEEECChHHhcCCHHHHHHHHHHHcCC---CeEEEEEeCChHH------hhh-hcchhhhh--hhhhhcCCHHHHH
Confidence 2 898887 899999999999 8877775432211 000 01111111 1223357999999
Q ss_pred HHHHhCCCceeEEEecC
Q 043533 275 KLFFDAVFSHYKITPIF 291 (301)
Q Consensus 275 ~ll~~aGf~~~~~~~~~ 291 (301)
++++++||+++++...+
T Consensus 238 ~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 238 GMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHcCCEEEEEEEcc
Confidence 99999999999998765
No 115
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.18 E-value=2e-11 Score=102.91 Aligned_cols=123 Identities=12% Similarity=0.042 Sum_probs=87.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc--chhHHH---------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP--ANAFLF--------- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~--~D~i~~--------- 213 (301)
...+|||||||+|.++..+ +. +++++|+ +.+++.+++ .++++++.+|+.+ +++. +|+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 110 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED 110 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC
Confidence 5689999999999999888 45 8999999 888887765 3689999999987 6654 999887
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchh-hccccCCccCCHHHHHHHHHhCCCceeEEE
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIV-MSVNATGKERTESEWAKLFFDAVFSHYKIT 288 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~-~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 288 (301)
++|++++++|+| ||.+++.+..... . +.......... .......+.+|.++++++|+ | .+++.
T Consensus 111 ~~~~l~~~~~~L~p---gG~l~i~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G--~~~~~ 176 (211)
T 2gs9_A 111 VERVLLEARRVLRP---GGALVVGVLEALS-P----WAALYRRLGEKGVLPWAQARFLAREDLKALLG--P--PEAEG 176 (211)
T ss_dssp HHHHHHHHHHHEEE---EEEEEEEEECTTS-H----HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S--CSEEE
T ss_pred HHHHHHHHHHHcCC---CCEEEEEecCCcC-c----HHHHHHHHhhccCccccccccCCHHHHHHHhc--C--cceeE
Confidence 899999999999 8888887753221 1 11000000000 00011245679999999999 7 44443
No 116
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.17 E-value=1.4e-11 Score=100.82 Aligned_cols=93 Identities=12% Similarity=0.224 Sum_probs=76.5
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC---
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP--- 206 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p--- 206 (301)
++ +.++ .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .+++ ++.+|..+++|
T Consensus 17 ~~-~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 17 AI-SALA--PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HH-HHHC--CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HH-HHhc--ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 45 5555 56677999999999999999999999999999999 888887763 2478 88899866433
Q ss_pred c-chhHHH-------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 207 P-ANAFLF-------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 ~-~D~i~~-------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
. ||+|++ .+++++++.|+| ||++++.+.
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPV---GGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCT---TCEEEEEEC
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCC---CCEEEEEee
Confidence 3 999987 699999999999 898887664
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.17 E-value=3.6e-11 Score=99.25 Aligned_cols=94 Identities=15% Similarity=0.302 Sum_probs=76.5
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CC--CeEEEeCCCCCCCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------AD--NLKYIAGDMLRFIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~--ri~~~~~D~~~~~p 206 (301)
..++ +.+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .+ |++++.+|+.++.+
T Consensus 42 ~~l~-~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 42 KILV-ENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHH-HHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred HHHH-HHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 4456 6665 556789999999999999999988 779999999 888877764 22 59999999988554
Q ss_pred c--chhHHH------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 207 P--ANAFLF------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 ~--~D~i~~------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
. ||+|++ .+++++++.|+| ||.+++...
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 158 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKD---NGEIWVVIQ 158 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCC---CCEEEEEEC
Confidence 3 888775 889999999999 888887764
No 118
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.17 E-value=1.6e-11 Score=103.21 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=71.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-c-chhHHH-------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP-P-ANAFLF------- 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p-~-~D~i~~------- 213 (301)
..+|||||||+|.++..+++.+|+.+++++|. +.+++.+++ .++++++.+|+.+..+ . ||+|++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~~~~~ 145 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLN 145 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCSSSHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEeccCCHH
Confidence 67999999999999999999999999999999 888877764 2459999999987433 3 999887
Q ss_pred HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.+++++++.|+| ||.+++.
T Consensus 146 ~~l~~~~~~L~~---gG~l~~~ 164 (207)
T 1jsx_A 146 DMVSWCHHLPGE---QGRFYAL 164 (207)
T ss_dssp HHHHHHTTSEEE---EEEEEEE
T ss_pred HHHHHHHHhcCC---CcEEEEE
Confidence 899999999999 8877775
No 119
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.16 E-value=2.4e-11 Score=107.74 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=85.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CC---------------------------------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--AD--------------------------------- 192 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~--------------------------------- 192 (301)
...+|||||||+|.++ .++...+..+++++|+ +.+++.|++ ..
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4679999999999944 3444445569999999 888876543 00
Q ss_pred -CeEEEeCCCCC--C-----CCc--chhHHH---------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchh
Q 043533 193 -NLKYIAGDMLR--F-----IPP--ANAFLF---------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHE 247 (301)
Q Consensus 193 -ri~~~~~D~~~--~-----~p~--~D~i~~---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~ 247 (301)
.+.++.+|+.+ | ++. ||+|++ ++|++++++|+| ||++++.+.. .....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~~~~~~-~~~~~--- 222 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP---GGHLLLIGAL-EESWY--- 222 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEEE-SCCEE---
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEEec-CcceE---
Confidence 14567778876 2 222 898765 789999999999 8988887532 21110
Q ss_pred hhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 248 LTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 248 ~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
..-+. ......++.++|.++|+++||+++++...
T Consensus 223 -----~~~~~----~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 223 -----LAGEA----RLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp -----EETTE----EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred -----EcCCe----eeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 00000 01123468999999999999999987654
No 120
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.15 E-value=3.2e-12 Score=110.08 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=70.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC---CCCc--chhHHH---
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR---FIPP--ANAFLF--- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~---~~p~--~D~i~~--- 213 (301)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.|++ ..+++++.+|+.+ ++++ ||+|++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4567999999999999999976544 38999999 888887764 4679999999865 4553 898854
Q ss_pred -------------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 -------------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 -------------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
.+|++++++|+| ||++++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCC---CeEEEEEecC
Confidence 569999999999 8988887653
No 121
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.14 E-value=1.4e-11 Score=105.96 Aligned_cols=90 Identities=12% Similarity=0.224 Sum_probs=75.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC----c-chhHHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP----P-ANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p----~-~D~i~~ 213 (301)
..+..+|||||||+|..+..+++.+|+.+++++|+ +++++.|++ .++|+++.+|+.+..| . ||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 55678999999999999999999889999999999 888887764 3589999999987433 3 999988
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
.+++++.+.|+| ||.+++.+...
T Consensus 149 ~~~~~~~~~~l~~~~~~Lkp---gG~lv~d~~~~ 179 (232)
T 3ntv_A 149 DAAKAQSKKFFEIYTPLLKH---QGLVITDNVLY 179 (232)
T ss_dssp ETTSSSHHHHHHHHGGGEEE---EEEEEEECTTG
T ss_pred cCcHHHHHHHHHHHHHhcCC---CeEEEEeeCCc
Confidence 899999999999 77776644433
No 122
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.14 E-value=4e-11 Score=105.74 Aligned_cols=95 Identities=14% Similarity=0.175 Sum_probs=80.3
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p 206 (301)
..++ ..++ +....+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .++++++.+|+.+.++
T Consensus 102 ~~i~-~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 102 SFIA-MMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHH-HHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 3455 5555 667789999999999999999999 78999999999 888887764 2689999999987665
Q ss_pred c--chhHHH------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 P--ANAFLF------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 ~--~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. +|+|++ .+|+++.++|+| ||.+++..
T Consensus 179 ~~~~D~V~~~~~~~~~~l~~~~~~L~p---gG~l~~~~ 213 (277)
T 1o54_A 179 EKDVDALFLDVPDPWNYIDKCWEALKG---GGRFATVC 213 (277)
T ss_dssp CCSEEEEEECCSCGGGTHHHHHHHEEE---EEEEEEEE
T ss_pred CCccCEEEECCcCHHHHHHHHHHHcCC---CCEEEEEe
Confidence 3 999998 899999999999 88888776
No 123
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.14 E-value=5.7e-11 Score=100.63 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=72.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CCc--chhHHH---
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IPP--ANAFLF--- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p~--~D~i~~--- 213 (301)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ .++++++.+|+.+ + ++. +|+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467999999999999999999999999999999 888887764 3689999999986 4 543 888876
Q ss_pred ----------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 ----------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ----------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.+|++++++|+| ||.+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~ 155 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPE---NGEIHFK 155 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCT---TCEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCC---CcEEEEE
Confidence 399999999999 8887764
No 124
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=7.6e-11 Score=101.83 Aligned_cols=121 Identities=9% Similarity=0.088 Sum_probs=93.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--c-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP--P-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p--~-~D~i~~-- 213 (301)
.++..+|+|||||+|.+++.+++.+|..+++++|+ |.+++.|++ .++|++..+|.++.++ . ||+|++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 34557999999999999999999999999999999 888888875 4689999999998543 3 898764
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeE
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 286 (301)
.||....+.|++ ++++++.-. . ....+++||.+.||.+++
T Consensus 99 mGg~lI~~IL~~~~~~L~~---~~~lIlq~~-~-----------------------------~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 99 MGGTLIRTILEEGAAKLAG---VTKLILQPN-I-----------------------------AAWQLREWSEQNNWLITS 145 (244)
T ss_dssp ECHHHHHHHHHHTGGGGTT---CCEEEEEES-S-----------------------------CHHHHHHHHHHHTEEEEE
T ss_pred CchHHHHHHHHHHHHHhCC---CCEEEEEcC-C-----------------------------ChHHHHHHHHHCCCEEEE
Confidence 888888888887 666555421 0 134568899999999876
Q ss_pred EEec---CCceeEEEEe
Q 043533 287 ITPI---FGMKSLIEVY 300 (301)
Q Consensus 287 ~~~~---~~~~~~i~a~ 300 (301)
..-+ .-++-+|.+.
T Consensus 146 E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 146 EAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEEEEEE
Confidence 5543 2357777765
No 125
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.14 E-value=2.7e-10 Score=98.01 Aligned_cols=132 Identities=9% Similarity=0.058 Sum_probs=91.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHH----hcCCCCCCeEEEeCCCCCC-----CCc-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAV----ANLPEADNLKYIAGDMLRF-----IPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~----~~a~~~~ri~~~~~D~~~~-----~p~-~D~i~~- 213 (301)
+.+..+|||+|||+|.++..+++. .|+.+++++|+ +.++ +.+++..++.++.+|+..+ ++. +|+|++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 567789999999999999999986 57889999999 6553 3343357899999998763 223 899887
Q ss_pred -------HHH-HHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 -------KIL-KKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 -------~iL-~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
++| +.+++.|+| ||++++.-.... .|...-. +-...+..+.|+++||+..
T Consensus 154 ~a~~~~~~il~~~~~~~Lkp---GG~lvisik~~~--------------~d~t~~~-----~e~~~~~~~~L~~~gf~~~ 211 (232)
T 3id6_C 154 IAQPDQTDIAIYNAKFFLKV---NGDMLLVIKARS--------------IDVTKDP-----KEIYKTEVEKLENSNFETI 211 (232)
T ss_dssp CCCTTHHHHHHHHHHHHEEE---EEEEEEEEC---------------------CCS-----SSSTTHHHHHHHHTTEEEE
T ss_pred CCChhHHHHHHHHHHHhCCC---CeEEEEEEccCC--------------cccCCCH-----HHHHHHHHHHHHHCCCEEE
Confidence 444 556669999 898888732111 1111000 0112334567788999999
Q ss_pred EEEecCC---ceeEEEEe
Q 043533 286 KITPIFG---MKSLIEVY 300 (301)
Q Consensus 286 ~~~~~~~---~~~~i~a~ 300 (301)
+...+.. .+.++.++
T Consensus 212 ~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 212 QIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp EEEECTTTCSSCEEEEEE
T ss_pred EEeccCCCcCceEEEEEE
Confidence 9988733 47777765
No 126
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.14 E-value=1.8e-10 Score=98.43 Aligned_cols=115 Identities=14% Similarity=0.156 Sum_probs=89.6
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCC--CCCCc--chhHHH--
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDML--RFIPP--ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~--~~~p~--~D~i~~-- 213 (301)
+.+..+||||||| +|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+. .+++. ||+|++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4567899999999 999999999987 789999999 888888774 337999999963 35553 898873
Q ss_pred ----------------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCC
Q 043533 214 ----------------------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATG 265 (301)
Q Consensus 214 ----------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g 265 (301)
.+|+++.+.|+| ||+++++-.. .
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~---~----------------------- 182 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP---GGKVALYLPD---K----------------------- 182 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEE---EEEEEEEEES---C-----------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC---CeEEEEEecc---c-----------------------
Confidence 589999999999 8888875211 0
Q ss_pred ccCCHHHHHHHHHhCCCceeEEEecCC
Q 043533 266 KERTESEWAKLFFDAVFSHYKITPIFG 292 (301)
Q Consensus 266 ~~rt~~e~~~ll~~aGf~~~~~~~~~~ 292 (301)
.....++.+++++.||+...+....+
T Consensus 183 -~~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 183 -EKLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred -HhHHHHHHHHHHHcCCceEEEEecCC
Confidence 01246778999999998877766544
No 127
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.13 E-value=3e-11 Score=105.02 Aligned_cols=90 Identities=11% Similarity=0.100 Sum_probs=75.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-CC---cchhH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR--F-IP---PANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~--~-~p---~~D~i 211 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.|++ .++|+++.+|+.+ + ++ .||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 55678999999999999999999998 899999999 888887764 3689999999865 2 22 39999
Q ss_pred HH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 212 LF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 212 ~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
++ ..|+++++.|+| ||.+++.+...
T Consensus 141 ~~d~~~~~~~~~l~~~~~~Lkp---GG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYSRP---GTLIIGDNVVR 173 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTCCT---TCEEEEECCSG
T ss_pred EECCchHHHHHHHHHHHHhcCC---CeEEEEeCCCc
Confidence 85 899999999999 88776655543
No 128
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.13 E-value=1.4e-11 Score=106.27 Aligned_cols=139 Identities=14% Similarity=0.078 Sum_probs=87.4
Q ss_pred HHHHhhhhhcc-cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCe--------EEEe-CCCCCC
Q 043533 137 FVVKSECKQIF-EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNL--------KYIA-GDMLRF 204 (301)
Q Consensus 137 ~~~~~~~~~~~-~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri--------~~~~-~D~~~~ 204 (301)
.++ +.++ . ....+|||||||+|.++..++++. ..+++++|+ +.+++.+.+ ..++ .+.. .|+..+
T Consensus 27 ~~L-~~~~--~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 27 KAL-KEFH--LEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp HHH-HHTT--CCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC
T ss_pred HHH-HHcC--CCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC
Confidence 345 5554 3 235699999999999999999883 349999999 777776543 2333 3333 333322
Q ss_pred CCc---chhHHH---HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchh-hccccCCccCCHHHHHHHH
Q 043533 205 IPP---ANAFLF---KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIV-MSVNATGKERTESEWAKLF 277 (301)
Q Consensus 205 ~p~---~D~i~~---~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~-~~~~~~g~~rt~~e~~~ll 277 (301)
.++ +|++++ .+|++++++|+| ||+++++- -|..... ....+-. .+........+.+++.+++
T Consensus 103 ~~d~~~~D~v~~~l~~~l~~i~rvLkp---gG~lv~~~--~p~~e~~------~~~~~~~G~~~d~~~~~~~~~~l~~~l 171 (232)
T 3opn_A 103 RPSFTSIDVSFISLDLILPPLYEILEK---NGEVAALI--KPQFEAG------REQVGKNGIIRDPKVHQMTIEKVLKTA 171 (232)
T ss_dssp CCSEEEECCSSSCGGGTHHHHHHHSCT---TCEEEEEE--CHHHHSC------HHHHC-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEhhhHHHHHHHHHHhccC---CCEEEEEE--CcccccC------HHHhCcCCeecCcchhHHHHHHHHHHH
Confidence 232 788877 999999999999 89888842 1100000 0000000 0000001123788999999
Q ss_pred HhCCCceeEEEec
Q 043533 278 FDAVFSHYKITPI 290 (301)
Q Consensus 278 ~~aGf~~~~~~~~ 290 (301)
+++||++..+...
T Consensus 172 ~~aGf~v~~~~~~ 184 (232)
T 3opn_A 172 TQLGFSVKGLTFS 184 (232)
T ss_dssp HHHTEEEEEEEEC
T ss_pred HHCCCEEEEEEEc
Confidence 9999999987654
No 129
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.12 E-value=1.6e-10 Score=101.40 Aligned_cols=129 Identities=18% Similarity=0.208 Sum_probs=88.4
Q ss_pred cCCCeEEEecCCc--cHHHHHH-HHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC---C--C---c-c
Q 043533 148 EGLGSLVDVGGGN--VSFSRII-SEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRF---I--P---P-A 208 (301)
Q Consensus 148 ~~~~~vlDvGgG~--G~~~~~l-~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~---~--p---~-~ 208 (301)
.+..+|||||||+ +.++.++ .+..|+.+++++|. |.|+++++. ..+++|+.+|+.++ + | . +
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3568999999997 3344444 45689999999999 999999975 24799999999763 1 1 1 4
Q ss_pred h-----hHHH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCC
Q 043533 209 N-----AFLF--------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERT 269 (301)
Q Consensus 209 D-----~i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt 269 (301)
| ++++ .+|++++++|+| ||.|++.+...+..... . ....+..-........||
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P---GG~Lvls~~~~d~~p~~--~---~~~~~~~~~~g~p~~~rs 228 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS---GSYLAMSIGTAEFAPQE--V---GRVAREYAARNMPMRLRT 228 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT---TCEEEEEEECCTTSHHH--H---HHHHHHHHHTTCCCCCCC
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC---CcEEEEEeccCCCCHHH--H---HHHHHHHHhcCCCCccCC
Confidence 4 2332 599999999999 89888888755432111 1 111221111112235689
Q ss_pred HHHHHHHHHhCCCceeE
Q 043533 270 ESEWAKLFFDAVFSHYK 286 (301)
Q Consensus 270 ~~e~~~ll~~aGf~~~~ 286 (301)
.+|+.++|. ||+.++
T Consensus 229 ~~ei~~~f~--Glelve 243 (277)
T 3giw_A 229 HAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHHTTT--TSEECT
T ss_pred HHHHHHHhC--CCcccC
Confidence 999999994 999764
No 130
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.12 E-value=5.1e-11 Score=109.83 Aligned_cols=94 Identities=24% Similarity=0.377 Sum_probs=78.7
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C--CCeEEEeCCCCCCCC
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A--DNLKYIAGDMLRFIP 206 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~--~ri~~~~~D~~~~~p 206 (301)
.++ +.++ .....+|||+|||+|.++..+++++|+.+++++|. +.+++.+++ . .+++|+.+|++++++
T Consensus 213 ~ll-~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 213 FFM-QHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHH-HTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHH-HhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 355 6665 34458999999999999999999999999999999 888888775 1 268899999998766
Q ss_pred c--chhHHH----------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 P--ANAFLF----------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 ~--~D~i~~----------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. ||+|++ ++++++++.|+| ||.++++.
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~iv~ 334 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI---NGELYIVA 334 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC---CcEEEEEE
Confidence 4 999885 689999999999 89888864
No 131
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.12 E-value=4.6e-11 Score=101.43 Aligned_cols=85 Identities=20% Similarity=0.289 Sum_probs=71.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CCc--chhHHH---
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IPP--ANAFLF--- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p~--~D~i~~--- 213 (301)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ .+++.++.+|+.+ + ++. +|.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 467999999999999999999999999999999 888887764 3679999999876 3 443 776643
Q ss_pred ----------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 ----------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ----------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+|+++++.|+| ||.+++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~Lkp---gG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGK---GGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTT---SCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCC---CCEEEEEe
Confidence 589999999999 88887753
No 132
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.12 E-value=6.1e-11 Score=97.73 Aligned_cols=92 Identities=17% Similarity=0.296 Sum_probs=75.2
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP-- 206 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p-- 206 (301)
.++ +.++ .....+|||+|||+|.++..+++.. .+++++|. +.+++.+++ .++++++.+|+.++++
T Consensus 24 ~~~-~~~~--~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 24 LIM-CLAE--PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHH-HHHC--CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHH-HhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 345 5555 5667899999999999999999987 79999999 888877764 2689999999866333
Q ss_pred -cchhHHH--------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 -PANAFLF--------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 -~~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.||+|++ .+++++++.|+| ||.+++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~---gG~l~~~~ 134 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKP---GGRIIVTA 134 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 4898886 899999999999 88887765
No 133
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.11 E-value=9.7e-11 Score=98.79 Aligned_cols=115 Identities=16% Similarity=0.215 Sum_probs=89.1
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---CC
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---IP 206 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~p 206 (301)
++ ..++ .....+|||||||+|.++..+++. ..+++++|+ +++++.|++ .++++++.+|+.+. .+
T Consensus 47 ~l-~~l~--~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 47 TL-AALA--PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HH-HHHC--CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSC
T ss_pred HH-HhcC--CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCC
Confidence 45 5555 666789999999999999999998 789999999 888887764 23899999999873 23
Q ss_pred cchhHHH------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhC
Q 043533 207 PANAFLF------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDA 280 (301)
Q Consensus 207 ~~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~a 280 (301)
.||+|++ .+++++++.|+| ||++++..... .+..++.+++++.
T Consensus 122 ~~D~v~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~----------------------------~~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGGGSQALYDRLWEWLAP---GTRIVANAVTL----------------------------ESETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSCCCHHHHHHHHHHSCT---TCEEEEEECSH----------------------------HHHHHHHHHHHHH
T ss_pred CCCEEEECCcccHHHHHHHHHhcCC---CcEEEEEecCc----------------------------ccHHHHHHHHHhC
Confidence 4899887 489999999999 89887754311 0234566778888
Q ss_pred CCceeEEE
Q 043533 281 VFSHYKIT 288 (301)
Q Consensus 281 Gf~~~~~~ 288 (301)
|+++.++.
T Consensus 171 g~~i~~i~ 178 (204)
T 3njr_A 171 GGQLLRID 178 (204)
T ss_dssp CSEEEEEE
T ss_pred CCcEEEEE
Confidence 88777653
No 134
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=1.2e-11 Score=106.48 Aligned_cols=95 Identities=22% Similarity=0.288 Sum_probs=76.8
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCCc
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIPP 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p~ 207 (301)
...++ +.++ ..+..+|||||||+|.++..+++..| .+++++|+ +.+++.+++ .++++++.+|+..+++.
T Consensus 80 ~~~~~-~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (235)
T 1jg1_A 80 VAIML-EIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP 155 (235)
T ss_dssp HHHHH-HHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHH-HhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC
Confidence 34455 5555 66678999999999999999999988 89999998 888887764 24699999998556553
Q ss_pred ---chhHHH-----HHHHHHHHhcccCCCCcEEEEEe
Q 043533 208 ---ANAFLF-----KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 208 ---~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
||+|++ .+.+++.+.|+| ||++++.-
T Consensus 156 ~~~fD~Ii~~~~~~~~~~~~~~~L~p---gG~lvi~~ 189 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIPEPLIEQLKI---GGKLIIPV 189 (235)
T ss_dssp GCCEEEEEECSBBSSCCHHHHHTEEE---EEEEEEEE
T ss_pred CCCccEEEECCcHHHHHHHHHHhcCC---CcEEEEEE
Confidence 899987 677899999999 78777654
No 135
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=1e-10 Score=100.99 Aligned_cols=87 Identities=14% Similarity=0.092 Sum_probs=73.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHH----CCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCC--CC-----cchhHHH-
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEA----FPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLRF--IP-----PANAFLF- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~----~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~~--~p-----~~D~i~~- 213 (301)
.+..+|||||||+|..+..+++. +|+.+++++|+ +++++.|+. .++|+++.+|+.+. ++ .||+|++
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 34579999999999999999998 78999999999 888888764 57899999999763 22 2898885
Q ss_pred -------HHHHHHHH-hcccCCCCcEEEEEee
Q 043533 214 -------KILKKRRE-AIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -------~iL~~~~~-aL~p~~~gg~l~i~e~ 237 (301)
.+|+++++ .|+| ||++++.+.
T Consensus 160 ~~~~~~~~~l~~~~r~~Lkp---GG~lv~~d~ 188 (236)
T 2bm8_A 160 NAHANTFNIMKWAVDHLLEE---GDYFIIEDM 188 (236)
T ss_dssp SSCSSHHHHHHHHHHHTCCT---TCEEEECSC
T ss_pred CchHhHHHHHHHHHHhhCCC---CCEEEEEeC
Confidence 88999997 9999 898888765
No 136
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.10 E-value=1.5e-11 Score=111.60 Aligned_cols=147 Identities=12% Similarity=0.116 Sum_probs=80.2
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-----------------CCCeEE
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE-----------------ADNLKY 196 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~-----------------~~ri~~ 196 (301)
..++ ..++ .....+|||||||+|.++..+++. .|+.+++++|+ +.+++.|++ .+++++
T Consensus 95 ~~~l-~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 95 NMIL-SMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHH-HHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 3355 5555 667789999999999999999998 68899999999 888777654 268999
Q ss_pred EeCCCCCC---CCc--chhHHH------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhh---hhchhhccc
Q 043533 197 IAGDMLRF---IPP--ANAFLF------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKF---LFDIVMSVN 262 (301)
Q Consensus 197 ~~~D~~~~---~p~--~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~---~~d~~~~~~ 262 (301)
+.+|+.+. ++. ||+|++ .++++++++|+| ||.+++..........- ...... .+.......
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~ 246 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKH---GGVCAVYVVNITQVIEL--LDGIRTCELALSCEKISE 246 (336)
T ss_dssp EESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEE---EEEEEEEESSHHHHHHH--HHHHHHHTCCEEEEEEEC
T ss_pred EECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCC---CcEEEEEeCCHHHHHHH--HHHHHhcCCCcccceEEE
Confidence 99999872 343 999987 789999999999 89888766422111000 000000 000000000
Q ss_pred cCCc-------cCCHHHHHHHHHhCCCceeEEEec
Q 043533 263 ATGK-------ERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 263 ~~g~-------~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
...+ .+...+|.+.|+++||+++++...
T Consensus 247 ~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 247 VIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp CCCCCEEECC-------------------------
T ss_pred ecccceEEEeecccccchhhhhccccccccccccc
Confidence 0000 122238999999999998886543
No 137
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.09 E-value=1.4e-10 Score=97.44 Aligned_cols=89 Identities=17% Similarity=0.218 Sum_probs=74.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc--chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP--ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~--~D~i~~----- 213 (301)
+....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++. +|+|++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 355689999999999999999998765 8999999 888877664 3689999999987 6653 888761
Q ss_pred ---------------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 ---------------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 ---------------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
++|++++++|+| ||.+++.+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~ 162 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP---GGRFISMTSAA 162 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcC---CCEEEEEeCCC
Confidence 789999999999 89998887643
No 138
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.09 E-value=3.6e-11 Score=102.57 Aligned_cols=85 Identities=12% Similarity=0.139 Sum_probs=71.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC----CCc--chhHHH--
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRF----IPP--ANAFLF-- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~----~p~--~D~i~~-- 213 (301)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ .++++++.+|+.+. ++. +|.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999999999999999999 888877653 35799999997652 443 787765
Q ss_pred -----------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 -----------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 -----------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.++++++++|+| ||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~Lkp---GG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQL---GGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCC---CcEEEEEe
Confidence 399999999999 88777654
No 139
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=1.2e-10 Score=104.41 Aligned_cols=116 Identities=11% Similarity=0.128 Sum_probs=90.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC-CC---Cc-chhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLR-FI---PP-ANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~-~~---p~-~D~i 211 (301)
++..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .+|++++.+|+.+ .. +. ||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999998878889999999 888877653 4789999999876 21 33 8988
Q ss_pred HH---------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHH
Q 043533 212 LF---------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 276 (301)
Q Consensus 212 ~~---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~l 276 (301)
++ .++++++++|+| ||.+++... .. + ++ .....++.+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~----~~----~------~~----------~~~~~~~~~~ 226 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP---DGICCNQGE----SI----W------LD----------LELIEKMSRF 226 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE---EEEEEEEEC----CT----T------TC----------HHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC---CcEEEEecC----Cc----c------cc----------hHHHHHHHHH
Confidence 85 679999999999 787776521 00 0 10 1145678899
Q ss_pred HHhCCCceeEEEec
Q 043533 277 FFDAVFSHYKITPI 290 (301)
Q Consensus 277 l~~aGf~~~~~~~~ 290 (301)
++++||..+++...
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999999887654
No 140
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=1.5e-10 Score=94.76 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=88.4
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCCc-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIPP- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p~- 207 (301)
..++ +.++ ..+..+|||||||+|.++..+++ +..+++++|. +.+++.+++ .++++++.+|+.++++.
T Consensus 25 ~~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (183)
T 2yxd_A 25 AVSI-GKLN--LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKL 99 (183)
T ss_dssp HHHH-HHHC--CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGC
T ss_pred HHHH-HHcC--CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCC
Confidence 3455 5555 56678999999999999999998 7889999999 888887765 26899999999775553
Q ss_pred -chhHHH-------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHh
Q 043533 208 -ANAFLF-------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFD 279 (301)
Q Consensus 208 -~D~i~~-------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~ 279 (301)
||+|++ .+++++++. | ||.+++..... . +..++.+++++
T Consensus 100 ~~D~i~~~~~~~~~~~l~~~~~~--~---gG~l~~~~~~~-----~-----------------------~~~~~~~~l~~ 146 (183)
T 2yxd_A 100 EFNKAFIGGTKNIEKIIEILDKK--K---INHIVANTIVL-----E-----------------------NAAKIINEFES 146 (183)
T ss_dssp CCSEEEECSCSCHHHHHHHHHHT--T---CCEEEEEESCH-----H-----------------------HHHHHHHHHHH
T ss_pred CCcEEEECCcccHHHHHHHHhhC--C---CCEEEEEeccc-----c-----------------------cHHHHHHHHHH
Confidence 898886 889999888 8 89888876311 0 13556788899
Q ss_pred CCCceeEE
Q 043533 280 AVFSHYKI 287 (301)
Q Consensus 280 aGf~~~~~ 287 (301)
+||+...+
T Consensus 147 ~g~~~~~~ 154 (183)
T 2yxd_A 147 RGYNVDAV 154 (183)
T ss_dssp TTCEEEEE
T ss_pred cCCeEEEE
Confidence 99876654
No 141
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.07 E-value=1.8e-10 Score=103.16 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=88.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CC-------CeEEEeCCCCC---------CCC
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----AD-------NLKYIAGDMLR---------FIP 206 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~-------ri~~~~~D~~~---------~~p 206 (301)
...+|||||||+|..+..+++.. ..+++++|+ +.+++.|++ .. +++|..+|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46799999999998777766643 468999999 899998875 21 26787887722 234
Q ss_pred c--chhHHH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCcc----------ch-----hhhhhh-hh
Q 043533 207 P--ANAFLF--------------KILKKRREAIASNGERGKVIIIDIVINAEEE----------EH-----ELTETK-FL 254 (301)
Q Consensus 207 ~--~D~i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~----------~~-----~~~~~~-~~ 254 (301)
. ||+|++ .+|++++++|+| ||.+++..+....-.. .+ .+.... ..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp---GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 203 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS---GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIA 203 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE---EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccc
Confidence 2 898864 799999999999 8888776542111000 00 000000 00
Q ss_pred hchhhccccCC-------ccCCHHHHHHHHHhCCCceeEEEec
Q 043533 255 FDIVMSVNATG-------KERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 255 ~d~~~~~~~~g-------~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.+........+ ...+.+++.++++++||+.+.+...
T Consensus 204 ~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 204 DDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp TTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00000000111 2467899999999999999988654
No 142
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.06 E-value=3.4e-10 Score=101.43 Aligned_cols=161 Identities=12% Similarity=0.029 Sum_probs=100.9
Q ss_pred HHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------
Q 043533 121 QRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--------- 190 (301)
Q Consensus 121 ~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--------- 190 (301)
+.|+..+.. .....++ +.+........+|||||||+|.++..+++. +..+++++|+ +.+++.+++
T Consensus 10 r~~~~~~k~---~l~~~~~-~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 84 (313)
T 3bgv_A 10 RNFNNWMKS---VLIGEFL-EKVRQKKKRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRR 84 (313)
T ss_dssp HHHHHHHHH---HHHHHHH-HHHHHTC--CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSS
T ss_pred hhccHHHHH---HHHHHHH-HHhhhccCCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcc
Confidence 345544433 2233444 444322346789999999999999999884 6779999999 888877764
Q ss_pred ----CCCeEEEeCCCCC-C----C--C--cchhHHH---------------HHHHHHHHhcccCCCCcEEEEEeeeeCCC
Q 043533 191 ----ADNLKYIAGDMLR-F----I--P--PANAFLF---------------KILKKRREAIASNGERGKVIIIDIVINAE 242 (301)
Q Consensus 191 ----~~ri~~~~~D~~~-~----~--p--~~D~i~~---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~ 242 (301)
..+++++.+|+.+ + + + .+|+|++ .+|++++++|+| ||.+++.......-
T Consensus 85 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~l 161 (313)
T 3bgv_A 85 DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP---GGYFIGTTPNSFEL 161 (313)
T ss_dssp CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE---EEEEEEEEECHHHH
T ss_pred cccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC---CcEEEEecCChHHH
Confidence 1379999999976 4 3 2 3888764 789999999999 88877765422100
Q ss_pred ----------ccchhhhhhhhhhch------------hh-c-cccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 243 ----------EEEHELTETKFLFDI------------VM-S-VNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 243 ----------~~~~~~~~~~~~~d~------------~~-~-~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
...+.... ..+.+. .+ . +.......+.+++.+++++.||+.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 162 IRRLEASETESFGNEIYT-VKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp HHHHTTSSSSEEECSSEE-EEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred HHHHHhhccCccCCeeEE-EEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 00000000 000000 00 0 000112357899999999999999988754
No 143
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=5.7e-11 Score=103.45 Aligned_cols=124 Identities=10% Similarity=-0.013 Sum_probs=93.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC----Cc-chhHHH-
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI----PP-ANAFLF- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~----p~-~D~i~~- 213 (301)
....+|||||||+|..++.++..+|+.+++++|. +.+++.+++ -++|+++.+|+.+ +. .. ||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999999999999999999999999 888887764 3469999999876 33 23 999988
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEE
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKI 287 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 287 (301)
.+++.+++.|+| ||++++.... .... ...++.+.+++.||+..++
T Consensus 159 a~~~~~~ll~~~~~~Lkp---gG~l~~~~g~----~~~~----------------------e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 159 AVAPLCVLSELLLPFLEV---GGAAVAMKGP----RVEE----------------------ELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp SSCCHHHHHHHHGGGEEE---EEEEEEEECS----CCHH----------------------HHTTHHHHHHHHTEEEEEE
T ss_pred CcCCHHHHHHHHHHHcCC---CeEEEEEeCC----CcHH----------------------HHHHHHHHHHHcCCeEEEE
Confidence 899999999999 8988875521 1100 0123566778889998887
Q ss_pred Eec--CC---ceeEEEEe
Q 043533 288 TPI--FG---MKSLIEVY 300 (301)
Q Consensus 288 ~~~--~~---~~~~i~a~ 300 (301)
..+ ++ .+.++...
T Consensus 210 ~~~~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 210 LALQLPLSGEARHLVVLE 227 (249)
T ss_dssp EEEECTTTCCEEEEEEEE
T ss_pred EEeeCCCCCCcEEEEEEE
Confidence 654 32 35555543
No 144
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.06 E-value=4.4e-11 Score=101.77 Aligned_cols=90 Identities=12% Similarity=0.137 Sum_probs=74.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C-----Ccch
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I-----PPAN 209 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~-----p~~D 209 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++++++.+|+.+. + ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 45678999999999999999999998 789999999 888887764 46799999998652 1 2389
Q ss_pred hHHH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 210 AFLF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 210 ~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
+|++ .+|+++.+.|+| ||.+++.+...
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 170 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLSRP---GTVIIGDNVVR 170 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCCT---TCEEEEESCSG
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCC---CcEEEEeCCCc
Confidence 9885 899999999999 88666655443
No 145
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.05 E-value=1.4e-10 Score=102.89 Aligned_cols=83 Identities=16% Similarity=0.183 Sum_probs=70.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCc-c---hhHHH--
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIPP-A---NAFLF-- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p~-~---D~i~~-- 213 (301)
....+|||||||+|.++..+++. |+.+++++|+ +.+++.|++ .+|++|+.+|++++++. | |+|++
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnP 200 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNP 200 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECC
T ss_pred cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcC
Confidence 35679999999999999999999 9999999999 888888774 34799999999886554 7 88765
Q ss_pred ----------------------------HHHHHHH-HhcccCCCCcEEEE
Q 043533 214 ----------------------------KILKKRR-EAIASNGERGKVII 234 (301)
Q Consensus 214 ----------------------------~iL~~~~-~aL~p~~~gg~l~i 234 (301)
.+++++. +.++| ||.+++
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~p---gG~l~~ 247 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTS---GKIVLM 247 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCT---TCEEEE
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCC---CCEEEE
Confidence 5799999 99999 786664
No 146
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.05 E-value=9.7e-11 Score=98.98 Aligned_cols=86 Identities=14% Similarity=0.273 Sum_probs=71.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc-chhHHH------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP-ANAFLF------ 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~-~D~i~~------ 213 (301)
.....+|||||||+|.++..+++.+ .+++++|+ +.+++.+++ .++++++.+|+.+ +.+. ||+|++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 4456799999999999999999885 48999999 888877764 4689999999987 4233 998887
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
++|+++++.|+| ||.+++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~ 155 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAP---GGHLVFGSA 155 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCC---CCEEEEEec
Confidence 669999999999 888877654
No 147
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.05 E-value=1.7e-10 Score=95.11 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=84.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC--CC-Cc-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR--FI-PP-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~--~~-p~-~D~i~~-- 213 (301)
+....+|||||||+|.++..++++ ..+++++|+ +.+++.|++ .++++++.+|+.. ++ +. ||+|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 456789999999999999999988 789999999 889988875 2789999977654 13 33 887653
Q ss_pred ------------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHH
Q 043533 214 ------------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAK 275 (301)
Q Consensus 214 ------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ 275 (301)
.+|+++++.|+| ||++++............ . ....+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~----~----------------~~~~~~~~ 154 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEV---GGRLAIMIYYGHDGGDME----K----------------DAVLEYVI 154 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEE---EEEEEEEEC------CHH----H----------------HHHHHHHH
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCC---CcEEEEEEeCCCCCCHHH----H----------------HHHHHHHH
Confidence 578999999999 898888765322211110 0 01234455
Q ss_pred HHHhCCCceeEEEec
Q 043533 276 LFFDAVFSHYKITPI 290 (301)
Q Consensus 276 ll~~aGf~~~~~~~~ 290 (301)
.+...+|.+......
T Consensus 155 ~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 155 GLDQRVFTAMLYQPL 169 (185)
T ss_dssp HSCTTTEEEEEEEES
T ss_pred hCCCceEEEEEehhh
Confidence 555667888877665
No 148
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.05 E-value=1.6e-10 Score=99.76 Aligned_cols=86 Identities=15% Similarity=0.219 Sum_probs=70.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEeCCCCC--C--CCc--c
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP------------EADNLKYIAGDMLR--F--IPP--A 208 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~------------~~~ri~~~~~D~~~--~--~p~--~ 208 (301)
.+..+|||||||+|.++..+++.+|+..++++|+ +.+++.|+ ...+|+++.+|+.+ + ++. +
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4457899999999999999999999999999999 77776442 24689999999976 3 443 7
Q ss_pred hhHHH-------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 209 NAFLF-------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 209 D~i~~-------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
|.|++ .+|++++++|+| ||.|++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp---GG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV---GGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC---CCEEEEEe
Confidence 87654 499999999999 88877653
No 149
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.04 E-value=7.8e-11 Score=103.13 Aligned_cols=88 Identities=16% Similarity=0.226 Sum_probs=76.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCCc--chhHHH----HHHHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-FIPP--ANAFLF----KILKK 218 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~~p~--~D~i~~----~iL~~ 218 (301)
....+|||||||+|.++..+++..|+.+++++|+ +.+++.+++ ..++.++.+|+.+ +++. ||+|++ ..+++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l~~ 163 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEE 163 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhHHH
Confidence 4567999999999999999999998899999999 888888775 5789999999976 6554 999988 88999
Q ss_pred HHHhcccCCCCcEEEEEeee
Q 043533 219 RREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 219 ~~~aL~p~~~gg~l~i~e~~ 238 (301)
++++|+| ||++++....
T Consensus 164 ~~~~L~p---gG~l~~~~~~ 180 (269)
T 1p91_A 164 LARVVKP---GGWVITATPG 180 (269)
T ss_dssp HHHHEEE---EEEEEEEEEC
T ss_pred HHHhcCC---CcEEEEEEcC
Confidence 9999999 8999888754
No 150
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.04 E-value=8.4e-11 Score=105.43 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=71.1
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC---CCC-c-chhHHH-----
Q 043533 151 GSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR---FIP-P-ANAFLF----- 213 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~---~~p-~-~D~i~~----- 213 (301)
.+|||||||+|.++..+++.+|+.+++++|+ |.+++.+++ .+|++++.+|..+ ..+ . ||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999999999999999999999 999988764 4789999999865 343 3 998886
Q ss_pred ----------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 ----------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ----------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.++++++++|+| ||.+++.-
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lkp---gGvlv~~~ 200 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAP---GGLYVANC 200 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCC---CcEEEEEe
Confidence 789999999999 77665544
No 151
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.03 E-value=4.9e-11 Score=103.39 Aligned_cols=91 Identities=12% Similarity=0.144 Sum_probs=75.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C-----Cc-c
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR--F-I-----PP-A 208 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~--~-~-----p~-~ 208 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.|++ .++|+++.+|+.+ + + +. |
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 45678999999999999999999986 889999999 888877764 4689999999876 2 2 23 9
Q ss_pred hhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 209 NAFLF--------KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 209 D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
|+|++ ..|+++.+.|+| ||.+++.+....
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~~ 174 (242)
T 3r3h_A 138 DFIFIDADKTNYLNYYELALKLVTP---KGLIAIDNIFWD 174 (242)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHEEE---EEEEEEECSSSS
T ss_pred eEEEEcCChHHhHHHHHHHHHhcCC---CeEEEEECCccC
Confidence 99987 889999999999 776666555544
No 152
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=5.3e-11 Score=101.33 Aligned_cols=91 Identities=10% Similarity=0.077 Sum_probs=75.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C------Ccc
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I------PPA 208 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~------p~~ 208 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++++++.+|+.+. . ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 45578999999999999999999988 889999999 888887764 36799999998652 2 339
Q ss_pred hhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 209 NAFLF--------KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 209 D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
|+|++ .+++++++.|+| ||.+++.+...+
T Consensus 142 D~v~~~~~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~ 178 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYEESLKLLRE---GGLIAVDNVLRR 178 (225)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEEE---EEEEEEECSSGG
T ss_pred cEEEECCCHHHHHHHHHHHHHhcCC---CcEEEEeCCCcC
Confidence 99886 889999999999 887777665543
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.03 E-value=1.3e-10 Score=105.80 Aligned_cols=96 Identities=18% Similarity=0.237 Sum_probs=77.7
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCCc-c
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIPP-A 208 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p~-~ 208 (301)
..++ +.++ .....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+++..+. |
T Consensus 186 ~~ll-~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 186 QLLL-STLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHH-HHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHH-HhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 4456 6664 33457999999999999999999999999999999 788887764 33467889999874344 8
Q ss_pred hhHHH----------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 209 NAFLF----------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 209 D~i~~----------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
|+|++ ++|++++++|+| ||.++++..
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~ 304 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS---GGELRIVAN 304 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE---EEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCC---CcEEEEEEc
Confidence 88765 789999999999 899888765
No 154
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.02 E-value=2.1e-10 Score=107.13 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=79.3
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcC-------CC--------CCCeEEEeC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANL-------PE--------ADNLKYIAG 199 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a-------~~--------~~ri~~~~~ 199 (301)
..++ +.++ .....+|||||||+|.++..+++.++..+++++|+ +.+++.| ++ .++|+++.+
T Consensus 232 ~~ml-~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 232 SDVY-QQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHH-HHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 3455 5554 56778999999999999999999988889999999 7776666 32 268999988
Q ss_pred CCCC-C--C----CcchhHHH----------HHHHHHHHhcccCCCCcEEEEEeeeeCCC
Q 043533 200 DMLR-F--I----PPANAFLF----------KILKKRREAIASNGERGKVIIIDIVINAE 242 (301)
Q Consensus 200 D~~~-~--~----p~~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~ 242 (301)
|.+. + + ..||+|++ ..|+++.+.|+| ||++++.+.+.+..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKp---GG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKV---GCKIISLKSLRSLT 365 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCT---TCEEEESSCSSCTT
T ss_pred CccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCC---CeEEEEeeccCCcc
Confidence 6543 2 2 23888876 788999999999 99999998776654
No 155
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.02 E-value=2e-10 Score=95.68 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=73.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C-CC-c-chhHHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-F-IP-P-ANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~-~p-~-~D~i~~ 213 (301)
.....+|||+|||+|.++..+++++ |..+++++|+ +.+++.+++ .++++++.+|+.+ + .. . ||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 4566899999999999999999985 7789999999 888888765 2689999999865 2 33 3 888764
Q ss_pred --------------------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 --------------------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 --------------------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
++++++++.|+| ||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~---gG~l~~~~~~ 141 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT---GGIITVVIYY 141 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE---EEEEEEEECC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC---CCEEEEEEcc
Confidence 689999999999 8988887653
No 156
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.02 E-value=2.3e-10 Score=108.75 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=74.0
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p 206 (301)
...++ +.+. ..+..+|||||||+|.++..+++ .|..+++++|+.++++.|++ .++|+++.+|+.+ ++|
T Consensus 147 ~~~il-~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 147 QRAIL-QNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHH-HTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHH-Hhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 34456 5554 45568999999999999998887 57789999999657776654 3789999999988 677
Q ss_pred c-chhHHH-------------HHHHHHHHhcccCCCCcEEEE
Q 043533 207 P-ANAFLF-------------KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 207 ~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i 234 (301)
. +|+|++ ..+.++++.|+| ||.+++
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp---gG~li~ 261 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 261 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEE---EEEEES
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCC---CCEEEE
Confidence 6 998876 567788899999 787763
No 157
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.02 E-value=1.3e-10 Score=96.26 Aligned_cols=85 Identities=12% Similarity=0.097 Sum_probs=67.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~--- 213 (301)
+....+|||||||+|.++..++...|+.+++++|+ +.+++.++. ..++++ .|... +.+. ||+|++
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 35578999999999999999999999999999999 889988874 235665 67755 4444 898876
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 --------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
..+.+++++|+| ||.++-++
T Consensus 125 LHlL~~~~~al~~v~~~L~p---ggvfISfp 152 (200)
T 3fzg_A 125 LPVLKQQDVNILDFLQLFHT---QNFVISFP 152 (200)
T ss_dssp HHHHHHTTCCHHHHHHTCEE---EEEEEEEE
T ss_pred HHhhhhhHHHHHHHHHHhCC---CCEEEEeC
Confidence 455589999999 56544444
No 158
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.01 E-value=1.1e-10 Score=100.02 Aligned_cols=90 Identities=9% Similarity=0.258 Sum_probs=75.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C--Cc-chhHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I--PP-ANAFL 212 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~--p~-~D~i~ 212 (301)
..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.|++ .++++++.+|+.+. . +. ||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 45678999999999999999999999999999999 888887764 26899999998762 2 23 89988
Q ss_pred H--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 213 F--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 213 ~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
+ .+|+++.+.|+| ||.+++.+...
T Consensus 132 ~~~~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 163 (233)
T 2gpy_A 132 IDAAKGQYRRFFDMYSPMVRP---GGLILSDNVLF 163 (233)
T ss_dssp EEGGGSCHHHHHHHHGGGEEE---EEEEEEETTTC
T ss_pred ECCCHHHHHHHHHHHHHHcCC---CeEEEEEcCCc
Confidence 7 899999999999 88777765433
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.01 E-value=3.4e-10 Score=103.33 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=70.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCc--chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPP--ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~--~D~i~~--- 213 (301)
.....+|||||||+|.++..++++ +..+++++|+.++++.|++ .++|+++.+|+.+ ++|. +|+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 445689999999999999999988 6679999999667777764 4679999999988 7773 999885
Q ss_pred -----------HHHHHHHHhcccCCCCcEEE
Q 043533 214 -----------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 214 -----------~iL~~~~~aL~p~~~gg~l~ 233 (301)
.+|+++.+.|+| ||.++
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~Lkp---gG~li 170 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAP---DGLIF 170 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred cccccCchhHHHHHHHHHHhCCC---CCEEc
Confidence 889999999999 78765
No 160
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.01 E-value=3.1e-10 Score=103.24 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=71.5
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC-c-chh
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIP-P-ANA 210 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p-~-~D~ 210 (301)
+... ..+..+|||||||+|.++..++++ +..+++++|..++++.|++ .++|+++.+|+.+ ++| . +|+
T Consensus 58 ~~~~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 58 QNPH--IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDV 134 (340)
T ss_dssp HCGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEE
T ss_pred hhhh--hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEE
Confidence 4444 556789999999999999999987 4569999999558777764 3789999999987 677 3 998
Q ss_pred HHH--------------HHHHHHHHhcccCCCCcEEE
Q 043533 211 FLF--------------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 211 i~~--------------~iL~~~~~aL~p~~~gg~l~ 233 (301)
|++ .+|+++++.|+| ||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkp---gG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAK---GGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEE---EEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCC---CcEEE
Confidence 884 689999999999 88776
No 161
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.00 E-value=3.7e-10 Score=99.54 Aligned_cols=83 Identities=11% Similarity=0.167 Sum_probs=67.6
Q ss_pred CCCeEEEecCCccH----HHHHHHHHCC----CCeEEEeec-hHHHhcCCCC----------------------------
Q 043533 149 GLGSLVDVGGGNVS----FSRIISEAFP----GIKCTVLDL-PHAVANLPEA---------------------------- 191 (301)
Q Consensus 149 ~~~~vlDvGgG~G~----~~~~l~~~~P----~~~~~~~Dl-p~~~~~a~~~---------------------------- 191 (301)
+..+|+|+|||||. +++.|++..| +.+++++|+ +.+++.|+++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 6677777755 468999999 8888877531
Q ss_pred ---------CCeEEEeCCCCC-CCC--c-chhHHH-------------HHHHHHHHhcccCCCCcEEEE
Q 043533 192 ---------DNLKYIAGDMLR-FIP--P-ANAFLF-------------KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 192 ---------~ri~~~~~D~~~-~~p--~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i 234 (301)
++|+|..+|+.+ ++| . +|+|++ +++++++++|+| ||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p---gG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP---DGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC---CcEEEE
Confidence 369999999998 565 3 999887 899999999999 776655
No 162
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.99 E-value=6.7e-10 Score=109.76 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=73.8
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------------CCCeEEEeCCCCC-CC
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE------------ADNLKYIAGDMLR-FI 205 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~------------~~ri~~~~~D~~~-~~ 205 (301)
+.+. ..+..+|||||||+|.++..|++.. |..+++++|+ +.+++.|++ ..+|+|+.+|+.+ +.
T Consensus 715 elL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~ 792 (950)
T 3htx_A 715 KHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS 792 (950)
T ss_dssp HHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT
T ss_pred HHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc
Confidence 4444 3467899999999999999999998 5679999999 888887753 2579999999987 65
Q ss_pred Cc--chhHHH-------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 206 PP--ANAFLF-------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 206 p~--~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+. ||+|++ .+++++++.|+| | .++|..+
T Consensus 793 ~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKP---G-~LIISTP 835 (950)
T 3htx_A 793 RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHP---K-LLIVSTP 835 (950)
T ss_dssp TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCC---S-EEEEEEC
T ss_pred ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCC---C-EEEEEec
Confidence 53 999886 589999999999 6 5555543
No 163
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.99 E-value=5.6e-10 Score=98.98 Aligned_cols=139 Identities=12% Similarity=0.064 Sum_probs=88.8
Q ss_pred HHHHhhhhhccc-CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhc-CCCCCCeEEEe-CCCCC----CCCc-
Q 043533 137 FVVKSECKQIFE-GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVAN-LPEADNLKYIA-GDMLR----FIPP- 207 (301)
Q Consensus 137 ~~~~~~~~~~~~-~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~-a~~~~ri~~~~-~D~~~----~~p~- 207 (301)
.++ +.+. .. ...+|||||||||.++..+++. +..+++++|+ +.|++. ++..+|+.... .|+.. .+|.
T Consensus 75 ~~l-~~~~--~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 75 KAL-AVFN--LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp HHH-HHTT--CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTC
T ss_pred HHH-HhcC--CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCC
Confidence 355 5554 33 3569999999999999999887 4568999999 788876 33356665443 34422 1332
Q ss_pred -chhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcc-ccCCccCCHHHHHHHH
Q 043533 208 -ANAFLF--------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSV-NATGKERTESEWAKLF 277 (301)
Q Consensus 208 -~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~g~~rt~~e~~~ll 277 (301)
+|++++ .+|+++++.|+| ||+++++- -|+-.... ...+..=.+ ......++.+++.+++
T Consensus 151 ~fD~v~~d~sf~sl~~vL~e~~rvLkp---GG~lv~lv--kPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~~ 219 (291)
T 3hp7_A 151 LPSFASIDVSFISLNLILPALAKILVD---GGQVVALV--KPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAFA 219 (291)
T ss_dssp CCSEEEECCSSSCGGGTHHHHHHHSCT---TCEEEEEE--CGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeeHhhHHHHHHHHHHHcCc---CCEEEEEE--CcccccCh------hhcCCCCccCCHHHHHHHHHHHHHHH
Confidence 676554 899999999999 89998862 11111110 001100000 0001124678899999
Q ss_pred HhCCCceeEEEec
Q 043533 278 FDAVFSHYKITPI 290 (301)
Q Consensus 278 ~~aGf~~~~~~~~ 290 (301)
+++||++..+...
T Consensus 220 ~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 220 VDYGFSVKGLDFS 232 (291)
T ss_dssp HHTTEEEEEEEEC
T ss_pred HHCCCEEEEEEEC
Confidence 9999999887654
No 164
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=1e-10 Score=99.89 Aligned_cols=90 Identities=7% Similarity=0.061 Sum_probs=74.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C------Ccc
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I------PPA 208 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~------p~~ 208 (301)
..+..+|||||||+|..+..+++..| +.+++++|. +.+++.+++ .++++++.+|+.+. + ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999987 789999999 888877764 36899999998652 2 338
Q ss_pred hhHHH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 209 NAFLF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 209 D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
|+|++ .+++++.+.|+| ||.+++.+...
T Consensus 147 D~v~~d~~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDADKENCSAYYERCLQLLRP---GGILAVLRVLW 182 (229)
T ss_dssp EEEEECSCSTTHHHHHHHHHHHEEE---EEEEEEECCSG
T ss_pred cEEEECCCHHHHHHHHHHHHHHcCC---CeEEEEECCCc
Confidence 99887 789999999999 78777665443
No 165
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.97 E-value=2.2e-10 Score=102.06 Aligned_cols=86 Identities=12% Similarity=0.220 Sum_probs=71.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC---Cc-chhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRFI---PP-ANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~~---p~-~D~i 211 (301)
++.++|||||||+|.++..+++..|..+++++|+ +.+++.|++ .+|++++.+|.++.+ +. ||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4578999999999999999999878889999999 888887653 358999999988732 23 9998
Q ss_pred HH---------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 212 LF---------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 212 ~~---------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
++ .++++++++|+| ||.+++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC---CCEEEEec
Confidence 76 689999999999 77666543
No 166
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.96 E-value=2.5e-10 Score=97.57 Aligned_cols=83 Identities=7% Similarity=0.116 Sum_probs=69.3
Q ss_pred eEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------C-CCeEEEeCCCCC---CC-Cc-chhHHH---
Q 043533 152 SLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------A-DNLKYIAGDMLR---FI-PP-ANAFLF--- 213 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~-~ri~~~~~D~~~---~~-p~-~D~i~~--- 213 (301)
+|||||||+|..+..+++..| +.+++++|+ +++++.|++ . +||+++.+|+.+ .+ +. ||+|++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS 138 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc
Confidence 999999999999999999875 889999999 888887764 3 689999999865 24 33 999987
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++++.+.|+| ||.+++.+.
T Consensus 139 ~~~~~~~l~~~~~~Lkp---GG~lv~dn~ 164 (221)
T 3dr5_A 139 PMDLKALVDAAWPLLRR---GGALVLADA 164 (221)
T ss_dssp TTTHHHHHHHHHHHEEE---EEEEEETTT
T ss_pred HHHHHHHHHHHHHHcCC---CcEEEEeCC
Confidence 789999999999 676555443
No 167
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.95 E-value=4.7e-10 Score=98.72 Aligned_cols=96 Identities=13% Similarity=0.226 Sum_probs=79.7
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC---------CCCeEEEeCCCCC-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE---------ADNLKYIAGDMLR- 203 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~---------~~ri~~~~~D~~~- 203 (301)
..++ ..++ .....+|||+|||+|.++..+++. .|..+++++|+ +++++.+++ .++++++.+|+.+
T Consensus 89 ~~i~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 89 AQIV-HEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHH-HHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 3455 5555 666789999999999999999996 68899999999 888777653 2589999999987
Q ss_pred CCCc--chhHHH------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 204 FIPP--ANAFLF------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 204 ~~p~--~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+++. +|+|++ .+|+++.++|+| ||++++...
T Consensus 166 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~ 204 (280)
T 1i9g_A 166 ELPDGSVDRAVLDMLAPWEVLDAVSRLLVA---GGVLMVYVA 204 (280)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEE---EEEEEEEES
T ss_pred CCCCCceeEEEECCcCHHHHHHHHHHhCCC---CCEEEEEeC
Confidence 5543 999988 899999999999 898888764
No 168
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.95 E-value=7e-10 Score=91.95 Aligned_cols=86 Identities=8% Similarity=-0.007 Sum_probs=69.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--C-Cc-chhHHH--
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--I-PP-ANAFLF-- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~-p~-~D~i~~-- 213 (301)
....+|||+|||+|.++..+++. +..+++++|+ +++++.+++ .++++++.+|+.+ . + +. ||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 35689999999999999988874 5668999999 889888875 2689999999876 2 3 23 888876
Q ss_pred ----------HHHHHHHH--hcccCCCCcEEEEEee
Q 043533 214 ----------KILKKRRE--AIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ----------~iL~~~~~--aL~p~~~gg~l~i~e~ 237 (301)
++++++.+ .|+| ||.+++...
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~p---gG~l~~~~~ 154 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTRE---GTVAVVERA 154 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCT---TCEEEEEEE
T ss_pred CCCcchhhHHHHHHHHHhcCccCC---CeEEEEEec
Confidence 78999998 9999 887777544
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.95 E-value=1e-09 Score=99.31 Aligned_cols=83 Identities=17% Similarity=0.300 Sum_probs=68.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC-c-chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIP-P-ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p-~-~D~i~~--- 213 (301)
..+..+|||||||+|.++..++++ +..+++++|..++++.|++ .++|+++.+|+.+ ++| . +|+|++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 445689999999999999999886 5569999999667776654 4689999999987 677 3 998874
Q ss_pred -----------HHHHHHHHhcccCCCCcEEE
Q 043533 214 -----------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 214 -----------~iL~~~~~aL~p~~~gg~l~ 233 (301)
.+|+++.+.|+| ||.++
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~Lkp---gG~li 142 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVE---GGLIF 142 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred hhhcccHHHHHHHHHHHHhhcCC---CeEEE
Confidence 788999999999 78775
No 170
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=2.8e-10 Score=96.10 Aligned_cols=94 Identities=14% Similarity=0.131 Sum_probs=76.8
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC--
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP-- 206 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p-- 206 (301)
.++ +.+. .....+|||||||+|.++..+++.. |+.+++++|. +.+++.+++ .++++++.+|+..+++
T Consensus 68 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 144 (215)
T 2yxe_A 68 MMC-ELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPL 144 (215)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGG
T ss_pred HHH-HhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCC
Confidence 455 5554 5667899999999999999999987 7789999999 888887764 2579999999866554
Q ss_pred c-chhHHH-----HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 P-ANAFLF-----KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 ~-~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. ||+|++ .+.+++++.|+| ||++++..
T Consensus 145 ~~fD~v~~~~~~~~~~~~~~~~L~p---gG~lv~~~ 177 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPEPLIRQLKD---GGKLLMPV 177 (215)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEE---EEEEEEEE
T ss_pred CCeeEEEECCchHHHHHHHHHHcCC---CcEEEEEE
Confidence 2 999987 666899999999 88888764
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.95 E-value=8.4e-10 Score=95.56 Aligned_cols=85 Identities=18% Similarity=0.306 Sum_probs=69.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEeCCCCCC----CCc-
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--------------ADNLKYIAGDMLRF----IPP- 207 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--------------~~ri~~~~~D~~~~----~p~- 207 (301)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+++. ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4567999999999999999999999999999998 777765532 25899999998763 332
Q ss_pred -chhHHH-------------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 208 -ANAFLF-------------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 208 -~D~i~~-------------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+|.|++ .+++++.+.|+| ||.+++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp---gG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKE---GGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCC---CCEEEEE
Confidence 565543 599999999999 8887774
No 172
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.94 E-value=1.3e-09 Score=91.02 Aligned_cols=82 Identities=18% Similarity=0.176 Sum_probs=65.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC--CCeEEEeechHHHhcCCCCCCeEEEeCCCCC-C-------------------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP--GIKCTVLDLPHAVANLPEADNLKYIAGDMLR-F------------------- 204 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P--~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~-~------------------- 204 (301)
+....+|||||||+|.++..+++++| +.+++++|+.++. ..++++++.+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 35567999999999999999999998 6899999995532 24679999999977 4
Q ss_pred ------CCc--chhHHH----------------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 205 ------IPP--ANAFLF----------------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 205 ------~p~--~D~i~~----------------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
++. ||+|++ .+|++++++|+| ||.+++.
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~ 153 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI---GGTYIVK 153 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEE
Confidence 342 888763 278999999999 8877663
No 173
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.94 E-value=1.8e-10 Score=97.15 Aligned_cols=90 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--CCCc-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR--FIPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~--~~p~-~D~i~~- 213 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|+.+ +... ||+|++
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 133 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMD 133 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEE
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEc
Confidence 34568999999999999999999988 889999999 888887764 3589999999865 3222 899886
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
.+++++++.|+| ||.+++.+...
T Consensus 134 ~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~ 163 (210)
T 3c3p_A 134 CDVFNGADVLERMNRCLAK---NALLIAVNALR 163 (210)
T ss_dssp TTTSCHHHHHHHHGGGEEE---EEEEEEESSSS
T ss_pred CChhhhHHHHHHHHHhcCC---CeEEEEECccc
Confidence 899999999999 78776655443
No 174
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.94 E-value=1.6e-09 Score=93.37 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=77.9
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC-Cc
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFI-PP 207 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~-p~ 207 (301)
.++ ..++ .....+|||+|||+|.++..+++. ..+++++|+ +++++.+++ .++++++.+|+.+.. +.
T Consensus 82 ~~~-~~~~--~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 82 YIA-LKLN--LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred HHH-HhcC--CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 345 5555 566789999999999999999998 779999998 888877764 278999999998855 43
Q ss_pred --chhHHH------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 208 --ANAFLF------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 208 --~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+|+|++ .+++++.+.|+| ||++++...
T Consensus 157 ~~~D~v~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVDVREPWHYLEKVHKSLME---GAPVGFLLP 191 (248)
T ss_dssp TCBSEEEECSSCGGGGHHHHHHHBCT---TCEEEEEES
T ss_pred CcccEEEECCcCHHHHHHHHHHHcCC---CCEEEEEeC
Confidence 999987 899999999999 898888774
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.94 E-value=3.2e-10 Score=96.51 Aligned_cols=89 Identities=9% Similarity=0.174 Sum_probs=70.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC---CCC------cc
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR---FIP------PA 208 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~---~~p------~~ 208 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ .++|+++.+|+.+ .++ .|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 45678999999999999999999864 889999999 888888775 3679999999743 232 38
Q ss_pred hhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 209 NAFLF-----------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 209 D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
|+|++ .+++.+ +.|+| ||.+++.+...
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~Lkp---gG~lv~~~~~~ 173 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRK---GTVLLADNVIV 173 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCT---TCEEEESCCCC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCC---CeEEEEeCCCC
Confidence 98887 466666 89999 88776655543
No 176
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.94 E-value=3.1e-10 Score=95.47 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=75.9
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC--
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP-- 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p-- 206 (301)
..++ +.++ ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+..+
T Consensus 67 ~~~~-~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 67 ARMT-ELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHH-HhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 4455 5555 667789999999999999999998 579999999 888887764 3579999999987432
Q ss_pred c-chhHHH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 207 P-ANAFLF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 ~-~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
. ||+|++ .+..++++.|+| ||++++.-.
T Consensus 142 ~~~D~i~~~~~~~~~~~~~~~~L~p---gG~lv~~~~ 175 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPTALMTQLDE---GGILVLPVG 175 (210)
T ss_dssp CCEEEEEESSBCSSCCTHHHHTEEE---EEEEEEEEC
T ss_pred CCccEEEEccchhhhhHHHHHhccc---CcEEEEEEc
Confidence 2 999988 666789999999 888777543
No 177
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.94 E-value=2e-10 Score=98.96 Aligned_cols=90 Identities=13% Similarity=0.170 Sum_probs=73.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C---------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I--------- 205 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~--------- 205 (301)
..+..+|||||||+|..+..+++..| ..+++++|. +.+++.+++ .++++++.+|+.+. +
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 45678999999999999999999988 789999999 888877764 25699999998652 1
Q ss_pred --------CcchhHHH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 206 --------PPANAFLF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 206 --------p~~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
..||+|++ .+|+++.+.|+| ||.+++.+...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 184 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKP---GGLLIADNVLW 184 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEE---EEEEEEECSSG
T ss_pred cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCC---CeEEEEEcccc
Confidence 23899887 889999999999 78777655443
No 178
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.94 E-value=1.4e-09 Score=88.03 Aligned_cols=84 Identities=15% Similarity=0.216 Sum_probs=68.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeechHHHhcCCCCCCeEEEeCCCCC-C--------CCc--chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDLPHAVANLPEADNLKYIAGDMLR-F--------IPP--ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~-~--------~p~--~D~i~~- 213 (301)
.....+|||||||+|.++..+++. .|+.+++++|+..+++ ..+++++.+|+.+ + ++. ||+|++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 355679999999999999999999 4789999999954433 2689999999987 4 553 887765
Q ss_pred ---------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++++++.|+| ||.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~ 137 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP---GGSFVVKVF 137 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC---CcEEEEEEe
Confidence 679999999999 888887664
No 179
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.93 E-value=4.9e-10 Score=96.62 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=72.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C------Cc-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR--F-I------PP- 207 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~--~-~------p~- 207 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++|+++.+|+.+ + + +.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 45678999999999999999999987 789999999 888877764 3589999999865 2 2 33
Q ss_pred chhHHH--------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 208 ANAFLF--------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 208 ~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
||+|++ .+++++.+.|+| ||.+++.+.
T Consensus 148 fD~I~~d~~~~~~~~~l~~~~~~L~p---GG~lv~d~~ 182 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHERLMKLVKV---GGIVAYDNT 182 (237)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEE---EEEEEEECT
T ss_pred cCEEEECCchHHHHHHHHHHHHhcCC---CeEEEEecC
Confidence 999987 899999999999 675554443
No 180
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.93 E-value=7.7e-10 Score=96.78 Aligned_cols=86 Identities=10% Similarity=0.214 Sum_probs=70.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC--------CC-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF--------IP- 206 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~--------~p- 206 (301)
.....+|||+|||+|.++..+++++|+.+++++|+ +.+++.|++ .+|++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 45567999999999999999999999999999999 887776653 13699999999764 33
Q ss_pred c-chhHHH-----------------------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 207 P-ANAFLF-----------------------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 207 ~-~D~i~~-----------------------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
. ||+|++ .+++.+.+.|+| ||+++++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~ 169 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS---GGQLSLI 169 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC---CCEEEEE
Confidence 2 887765 468999999999 8888774
No 181
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.93 E-value=7.3e-10 Score=96.57 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=89.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCc--chhHHH----------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPP--ANAFLF---------- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~i~~---------- 213 (301)
....+|||||||+|.++..+++. +.+++++|+ +.+++.+++...-.++.+|+.+ +++. ||+|++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 35689999999999999999987 568999999 8888877651111388899987 6653 887765
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeeeeCCCccc----hhhhhhhhhhchhhcc------ccCCccCCHHHHHHHHHhCC
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIVINAEEEE----HELTETKFLFDIVMSV------NATGKERTESEWAKLFFDAV 281 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~----~~~~~~~~~~d~~~~~------~~~g~~rt~~e~~~ll~~aG 281 (301)
.+|++++++|+| ||.+++........... ..+............. ......++.+++.++ +|
T Consensus 131 ~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---aG 204 (260)
T 2avn_A 131 KDKAFSEIRRVLVP---DGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---EG 204 (260)
T ss_dssp HHHHHHHHHHHEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---TT
T ss_pred HHHHHHHHHHHcCC---CeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---cC
Confidence 889999999999 88888766432110000 0000000000000000 000114678888888 99
Q ss_pred CceeEEEecCC
Q 043533 282 FSHYKITPIFG 292 (301)
Q Consensus 282 f~~~~~~~~~~ 292 (301)
|+++++..+.+
T Consensus 205 f~~~~~~~~~~ 215 (260)
T 2avn_A 205 FETVDIRGIGV 215 (260)
T ss_dssp EEEEEEEEECS
T ss_pred ceEEEEECCCC
Confidence 99999887643
No 182
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.92 E-value=2.7e-10 Score=98.97 Aligned_cols=90 Identities=10% Similarity=0.034 Sum_probs=74.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C------Cc-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR--F-I------PP- 207 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~--~-~------p~- 207 (301)
..+..+|||||||+|..+..+++..| +.+++++|+ +++++.|++ .++|+++.+|+.+ + + +.
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 45678999999999999999999988 789999999 888877764 3689999999865 2 2 23
Q ss_pred chhHHH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 208 ANAFLF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 208 ~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
||+|++ .+++++++.|+| ||.+++.+...
T Consensus 157 fD~V~~d~~~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~ 193 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHKRLIDLVKV---GGVIGYDNTLW 193 (247)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCT---TCCEEEECTTG
T ss_pred EEEEEEcCchHHHHHHHHHHHHhCCC---CeEEEEecCCc
Confidence 999986 899999999999 88776655443
No 183
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.91 E-value=9.4e-10 Score=100.47 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=77.8
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p 206 (301)
..++ .... +.+..+|||+|||+|.+++.++... |+.+++++|+ +.+++.|++ -++|+|+.+|+.+ +.+
T Consensus 193 ~~l~-~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 193 QALL-RLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHH-HHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHH-HHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 4455 5555 5667899999999999999999987 8999999999 888888875 2389999999987 433
Q ss_pred --cchhHHH-------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 --PANAFLF-------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 --~~D~i~~-------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+|+|++ .+++++++.|+| ||+++++.
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp---gG~l~i~t 317 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP---GGRVALLT 317 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT---TCEEEEEE
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 2687765 688999999999 89888864
No 184
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.91 E-value=5.9e-10 Score=97.49 Aligned_cols=93 Identities=16% Similarity=0.083 Sum_probs=68.9
Q ss_pred chHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CC----
Q 043533 134 MTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR-FI---- 205 (301)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~-~~---- 205 (301)
....++ +.++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ... ++.+|+.+ +.
T Consensus 33 ~~~~il-~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 33 DRENDI-FLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPK 105 (261)
T ss_dssp HHHHHH-HTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCG
T ss_pred HHHHHH-HhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc--cceeeeeeccccccc
Confidence 345566 6666 677789999999999999999987 468999999 889988775 111 22333332 22
Q ss_pred --Cc-chhHHH-------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 206 --PP-ANAFLF-------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 206 --p~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+. ||+|++ .+|++++++| | ||++++.-.
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~~ 149 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-G---SGTVRASVK 149 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-T---TSEEEEEEE
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c---CcEEEEEec
Confidence 23 888775 6899999999 9 898887643
No 185
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.91 E-value=4.5e-10 Score=91.93 Aligned_cols=96 Identities=7% Similarity=0.059 Sum_probs=72.0
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF--- 204 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~--- 204 (301)
..++ +.+. ......+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+.
T Consensus 20 ~~~~-~~l~-~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 20 GAIF-NMIG-PYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC 96 (177)
T ss_dssp HHHH-HHHC-SCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred HHHH-HHHH-hhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh
Confidence 3444 4443 1345679999999999999999987 6679999999 888887764 25799999998762
Q ss_pred CCc-chhHHH----------HHHHHHH--HhcccCCCCcEEEEEee
Q 043533 205 IPP-ANAFLF----------KILKKRR--EAIASNGERGKVIIIDI 237 (301)
Q Consensus 205 ~p~-~D~i~~----------~iL~~~~--~aL~p~~~gg~l~i~e~ 237 (301)
.+. ||+|++ .+++.+. +.|+| ||.+++...
T Consensus 97 ~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~---gG~l~~~~~ 139 (177)
T 2esr_A 97 LTGRFDLVFLDPPYAKETIVATIEALAAKNLLSE---QVMVVCETD 139 (177)
T ss_dssp BCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred hcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCC---CcEEEEEEC
Confidence 233 887776 6677776 88999 777666543
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.90 E-value=7.3e-10 Score=101.04 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=72.6
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCc-
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPP- 207 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~- 207 (301)
.++ +.+. ..+..+|||||||+|.++..++++ +..+++++|..++++.+++ .++|+++.+|+.+ +.|.
T Consensus 41 ~i~-~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 41 AIL-QNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHH-HTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHH-hccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 355 5554 456789999999999999999886 5679999999657666653 3789999999987 6666
Q ss_pred chhHHH-------------HHHHHHHHhcccCCCCcEEEE
Q 043533 208 ANAFLF-------------KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 208 ~D~i~~-------------~iL~~~~~aL~p~~~gg~l~i 234 (301)
+|+|++ ..+.++++.|+| ||.+++
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~ 153 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 153 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEE---EEEEES
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCC---CeEEEE
Confidence 998886 678888999999 787764
No 187
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=7.5e-10 Score=97.53 Aligned_cols=92 Identities=21% Similarity=0.175 Sum_probs=77.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC-CCc-chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRF-IPP-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~-~p~-~D~i~~---- 213 (301)
+.+..+|||+|||+|.++..+++..+..+++++|+ |.+++.+++ -++++++.+|+.+. .+. +|+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45678999999999999999999998889999999 888887774 25789999999773 333 999988
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeCC
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVINA 241 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~~ 241 (301)
.+++++.+.|+| ||.+++......+
T Consensus 197 ~~~~~l~~~~~~Lkp---gG~l~~s~~~~~~ 224 (272)
T 3a27_A 197 KTHKFLDKTFEFLKD---RGVIHYHETVAEK 224 (272)
T ss_dssp SGGGGHHHHHHHEEE---EEEEEEEEEEEGG
T ss_pred cHHHHHHHHHHHcCC---CCEEEEEEcCccc
Confidence 899999999999 8888877765433
No 188
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.90 E-value=7.1e-10 Score=102.24 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=71.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~---- 213 (301)
.....+|||||||+|.++..++++. ..+++++|...+++.+++ .++|+++.+|+.+ ++|. +|+|++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4557899999999999999999884 349999999877776654 4779999999987 6666 998875
Q ss_pred ----------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ----------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ----------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++++++.|+| ||.+++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lkp---gG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKP---TGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEE---EEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCC---CeEEEEecC
Confidence 689999999999 787765443
No 189
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.90 E-value=5.4e-10 Score=96.90 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=71.2
Q ss_pred CCCeEEEecCCccHHHHHHHHH--CCCCeEEEeec-hHHHhcCCC---CC-------C----------------------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEA--FPGIKCTVLDL-PHAVANLPE---AD-------N---------------------- 193 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~--~P~~~~~~~Dl-p~~~~~a~~---~~-------r---------------------- 193 (301)
...+|||+|||+|.++..+++. +|..+++++|+ +.+++.|++ .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999999998 78889999999 888887773 22 2
Q ss_pred ---eE-------------EEeCCCCCCC------C--cchhHHH--------------------HHHHHHHHhcccCCCC
Q 043533 194 ---LK-------------YIAGDMLRFI------P--PANAFLF--------------------KILKKRREAIASNGER 229 (301)
Q Consensus 194 ---i~-------------~~~~D~~~~~------p--~~D~i~~--------------------~iL~~~~~aL~p~~~g 229 (301)
++ |+.+|++++. + .||+|++ .++++++++|+| |
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---g 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA---H 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT---T
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC---C
Confidence 67 9999998854 3 3898875 689999999999 8
Q ss_pred cEEEEEee
Q 043533 230 GKVIIIDI 237 (301)
Q Consensus 230 g~l~i~e~ 237 (301)
|.++++..
T Consensus 208 G~l~~~~~ 215 (250)
T 1o9g_A 208 AVIAVTDR 215 (250)
T ss_dssp CEEEEEES
T ss_pred cEEEEeCc
Confidence 98887543
No 190
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.90 E-value=1.4e-09 Score=99.93 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=65.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH-------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF------- 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~------- 213 (301)
.++|||||||+|.++...+++. ..+++++|..++++.|++ .++|+++.+|+.+ ++|+ +|+|++
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l 162 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGL 162 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTB
T ss_pred CCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccc
Confidence 5799999999999998777764 358999999667776654 6889999999988 7887 999876
Q ss_pred -------HHHHHHHHhcccCCCCcEEE
Q 043533 214 -------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~ 233 (301)
.++....+.|+| ||.++
T Consensus 163 ~~e~~l~~~l~a~~r~Lkp---~G~~i 186 (376)
T 4hc4_A 163 LHESMLSSVLHARTKWLKE---GGLLL 186 (376)
T ss_dssp TTTCSHHHHHHHHHHHEEE---EEEEE
T ss_pred cccchhhhHHHHHHhhCCC---CceEC
Confidence 778888899999 77654
No 191
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.89 E-value=7.1e-10 Score=94.68 Aligned_cols=94 Identities=18% Similarity=0.227 Sum_probs=75.8
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCCCC--c-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLRFIP--P- 207 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~~~p--~- 207 (301)
..++ +.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+..+ .
T Consensus 60 ~~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (231)
T 1vbf_A 60 IFML-DELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKP 134 (231)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCC
T ss_pred HHHH-HhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCC
Confidence 3455 5555 5667899999999999999999986 78999999 888887764 2289999999977443 2
Q ss_pred chhHHH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 208 ANAFLF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 208 ~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
||+|++ .+..++++.|+| ||++++...
T Consensus 135 fD~v~~~~~~~~~~~~~~~~L~p---gG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLCKPYEQLKE---GGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEE---EEEEEEEEC
T ss_pred ccEEEECCcHHHHHHHHHHHcCC---CcEEEEEEc
Confidence 999887 667889999999 888887753
No 192
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.88 E-value=8.1e-10 Score=101.53 Aligned_cols=85 Identities=15% Similarity=0.110 Sum_probs=69.0
Q ss_pred cCCCeEEEecCC------ccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC-------c-chh
Q 043533 148 EGLGSLVDVGGG------NVSFSRIISEA-FPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIP-------P-ANA 210 (301)
Q Consensus 148 ~~~~~vlDvGgG------~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p-------~-~D~ 210 (301)
.+..+||||||| +|..+..++++ +|+.+++++|+ +.+.. ..++|+|+.+|+.+ +++ . ||+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~---~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV---DELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG---CBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh---cCCCcEEEEecccccchhhhhhcccCCccE
Confidence 346899999999 77777777765 69999999999 66632 36799999999987 554 3 899
Q ss_pred HHH----------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 211 FLF----------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 211 i~~----------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
|++ +.|++++++||| ||.+++.|..
T Consensus 292 VisdgsH~~~d~~~aL~el~rvLKP---GGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGSHINAHVRTSFAALFPHVRP---GGLYVIEDMW 326 (419)
T ss_dssp EEECSCCCHHHHHHHHHHHGGGEEE---EEEEEEECGG
T ss_pred EEECCcccchhHHHHHHHHHHhcCC---CeEEEEEecc
Confidence 876 889999999999 8877777764
No 193
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.87 E-value=7e-10 Score=97.91 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=70.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF---IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~---~p~-~D~i~ 212 (301)
++..+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+++. .+. ||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4568999999999999999998877889999999 888887653 47899999998752 233 89888
Q ss_pred H---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 213 F---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 213 ~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+ .++++++++|+| ||.+++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~p---gG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKE---DGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 7 689999999999 7766554
No 194
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.87 E-value=9.6e-10 Score=93.68 Aligned_cols=88 Identities=19% Similarity=0.169 Sum_probs=73.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-----PGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRFI---- 205 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-----P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~~---- 205 (301)
.....+|||||||+|.++..+++.. |+.+++++|. +++++.+++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4566899999999999999999986 6789999999 888877764 258999999997743
Q ss_pred C---cchhHHH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 206 P---PANAFLF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 206 p---~~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+ .||+|++ .+++++++.|+| ||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~~~~~~~~Lkp---gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELPEILVDLLAE---NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSCCHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHHHHHHHHhcCC---CcEEEEEEc
Confidence 2 2899987 788999999999 888777643
No 195
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.86 E-value=5.3e-10 Score=92.00 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=67.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC------Cc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFI------PP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~------p~-~D~i~ 212 (301)
....+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ .++++++.+|+.+.. +. ||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 4567999999999999999887 45679999999 888888774 257999999987621 33 88877
Q ss_pred H----------HHHHHH--HHhcccCCCCcEEEEEe
Q 043533 213 F----------KILKKR--REAIASNGERGKVIIID 236 (301)
Q Consensus 213 ~----------~iL~~~--~~aL~p~~~gg~l~i~e 236 (301)
+ ..++.+ ++.|+| ||.+++..
T Consensus 122 ~~~~~~~~~~~~~~~~l~~~~~L~~---gG~l~~~~ 154 (187)
T 2fhp_A 122 LDPPYAKQEIVSQLEKMLERQLLTN---EAVIVCET 154 (187)
T ss_dssp ECCCGGGCCHHHHHHHHHHTTCEEE---EEEEEEEE
T ss_pred ECCCCCchhHHHHHHHHHHhcccCC---CCEEEEEe
Confidence 6 677777 778999 77766554
No 196
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.86 E-value=2.5e-09 Score=89.21 Aligned_cols=89 Identities=10% Similarity=0.313 Sum_probs=67.0
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCC------------
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFI------------ 205 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~------------ 205 (301)
+. +.+. .+.+..+|||||||+|.++..++++ ..+++++|+.++. ..++++++.+|+.+..
T Consensus 16 i~-~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 16 LL-DRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----EIAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp HH-HHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC----CCTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred HH-HHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc----cCCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 44 4444 2456789999999999999999988 7799999994331 2468999999987631
Q ss_pred --CcchhHHH----------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 206 --PPANAFLF----------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 206 --p~~D~i~~----------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..+|+|++ .+|+.+.+.|+| ||.+++.-.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp---GG~lv~k~~ 140 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN---GGNVLLKQF 140 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEEc
Confidence 23677653 688999999999 887775443
No 197
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.85 E-value=1.1e-09 Score=98.45 Aligned_cols=95 Identities=12% Similarity=0.201 Sum_probs=76.5
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIP- 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p- 206 (301)
..++ +.++ ..+..+|||||||+|.++..+++..+ +.+++++|+ +++++.+++ .++++++.+|+.+..+
T Consensus 65 ~~l~-~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 65 ALFM-EWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHH-HhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 3455 5555 56678999999999999999999987 488999999 888887764 2569999999977332
Q ss_pred -c-chhHHH-----HHHHHHHHhcccCCCCcEEEEEe
Q 043533 207 -P-ANAFLF-----KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 207 -~-~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
. ||+|++ .+.+++.+.|+| ||++++..
T Consensus 142 ~~~fD~Iv~~~~~~~~~~~~~~~Lkp---gG~lvi~~ 175 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVPETWFTQLKE---GGRVIVPI 175 (317)
T ss_dssp GCCEEEEEECSBBSCCCHHHHHHEEE---EEEEEEEB
T ss_pred CCCeEEEEEcCCHHHHHHHHHHhcCC---CcEEEEEE
Confidence 2 999988 566888999999 88888764
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.84 E-value=4.9e-10 Score=96.28 Aligned_cols=90 Identities=14% Similarity=0.221 Sum_probs=73.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C------Ccc
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRF---I------PPA 208 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~---~------p~~ 208 (301)
..+..+|||||||+|..+..+++..| +.+++++|. +++++.|++ .++|+++.+|+.+. + ..|
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 44578999999999999999999987 789999999 888887764 35899999997541 2 338
Q ss_pred hhHHH--------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 209 NAFLF--------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 209 D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
|+|++ .+++++.+.|+| ||.+++.+...
T Consensus 150 D~V~~d~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~ 185 (232)
T 3cbg_A 150 DLIFIDADKRNYPRYYEIGLNLLRR---GGLMVIDNVLW 185 (232)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTEEE---EEEEEEECTTG
T ss_pred CEEEECCCHHHHHHHHHHHHHHcCC---CeEEEEeCCCc
Confidence 99886 889999999999 77776655443
No 199
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.83 E-value=1.8e-09 Score=91.83 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=71.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCCC---cchh
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRFIP---PANA 210 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~~p---~~D~ 210 (301)
.....+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ .++++++.+|+....+ .||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4556899999999999999999884 7789999999 888877753 2489999999876322 2999
Q ss_pred HHH-----HHHHHHHHhcccCCCCcEEEEEe
Q 043533 211 FLF-----KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 211 i~~-----~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
|++ .+++++++.|+| ||++++..
T Consensus 155 i~~~~~~~~~~~~~~~~Lkp---gG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAPVVPQALIDQLKP---GGRLILPV 182 (226)
T ss_dssp EEECSBBSSCCHHHHHTEEE---EEEEEEEE
T ss_pred EEECCchHHHHHHHHHhcCC---CcEEEEEE
Confidence 887 788999999999 88887754
No 200
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.83 E-value=2.3e-09 Score=93.96 Aligned_cols=83 Identities=8% Similarity=0.087 Sum_probs=70.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCCCCcchhHHH---
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRFIPPANAFLF--- 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~~p~~D~i~~--- 213 (301)
+.+.+|||||||+|.++..+++. + .+++++|+ +.+++.|++ .+|++++.+|..+-...||+|++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~ 148 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQE 148 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCC
Confidence 45689999999999999999988 7 89999999 999998875 35899999999763334999988
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 ---KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
..+++++++|+| ||.+++.
T Consensus 149 dp~~~~~~~~~~L~p---gG~lv~~ 170 (262)
T 2cmg_A 149 PDIHRIDGLKRMLKE---DGVFISV 170 (262)
T ss_dssp CCHHHHHHHHTTEEE---EEEEEEE
T ss_pred ChHHHHHHHHHhcCC---CcEEEEE
Confidence 789999999999 7766664
No 201
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.82 E-value=7.7e-10 Score=89.57 Aligned_cols=84 Identities=14% Similarity=0.139 Sum_probs=67.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC-------cchhHHH--
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIP-------PANAFLF-- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p-------~~D~i~~-- 213 (301)
...+|||+|||+|.++..+++..+. ++++|+ +.+++.+++ .-+++++.+|+.+..+ .||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 5689999999999999999999776 999999 888888775 2289999999876221 3888776
Q ss_pred -------HHHHHHH--HhcccCCCCcEEEEEee
Q 043533 214 -------KILKKRR--EAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -------~iL~~~~--~aL~p~~~gg~l~i~e~ 237 (301)
.+++.+. +.|+| ||.+++...
T Consensus 119 ~~~~~~~~~~~~~~~~~~L~~---gG~~~~~~~ 148 (171)
T 1ws6_A 119 PYAMDLAALFGELLASGLVEA---GGLYVLQHP 148 (171)
T ss_dssp CTTSCTTHHHHHHHHHTCEEE---EEEEEEEEE
T ss_pred CCchhHHHHHHHHHhhcccCC---CcEEEEEeC
Confidence 6777777 99999 787666543
No 202
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.82 E-value=2.3e-09 Score=87.70 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=74.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CC---Cc--chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR-FI---PP--ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~-~~---p~--~D~i~~---- 213 (301)
+....+|||||||. +.+|. +.+++.|++ ..+++++.+|+.+ ++ +. ||+|++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 66778999999996 23888 888887775 3469999999977 54 44 998886
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCC
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVF 282 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf 282 (301)
++|++++++|+| ||++++.+....... . ....++.++|.++|+++||
T Consensus 74 ~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~--------~-----------~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRP---GGCLFLKEPVETAVD--------N-----------NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEE---EEEEEEEEEEESSSC--------S-----------SSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCHHHHHHHHHHHCCC---CEEEEEEcccccccc--------c-----------ccccCCHHHHHHHHHHCCC
Confidence 899999999999 899888554322110 0 1123688999999999999
No 203
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.81 E-value=1.2e-09 Score=97.84 Aligned_cols=86 Identities=10% Similarity=0.118 Sum_probs=70.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC--C-CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLR--F-IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~--~-~p~-~D~i~ 212 (301)
.+..+|||||||+|.++..++++.|..+++++|+ +.+++.+++ .+|++++.+|+++ + .+. ||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888899999999 888877653 4789999999865 2 233 89888
Q ss_pred H---------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 213 F---------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 213 ~---------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
+ .++++++++|+| ||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE---DGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC---CeEEEEec
Confidence 5 579999999999 77666543
No 204
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.81 E-value=3.1e-09 Score=97.99 Aligned_cols=83 Identities=11% Similarity=0.177 Sum_probs=70.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-c-chhHHH------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIP-P-ANAFLF------ 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p-~-~D~i~~------ 213 (301)
...+|||+|||+|.++..+++. +.+++++|. +.+++.+++ .-+++++.+|+.+ +.+ . ||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 4679999999999999999998 569999999 888888775 3358999999988 444 3 998886
Q ss_pred ----------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 ----------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ----------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+++++++.|+| ||.++|+.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lkp---GG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRP---GGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 789999999999 88888764
No 205
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.81 E-value=1.3e-09 Score=98.71 Aligned_cols=85 Identities=13% Similarity=0.167 Sum_probs=70.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC---CCC-c-chhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLR---FIP-P-ANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~---~~p-~-~D~i 211 (301)
....+|||||||+|.++..++++.|..+++++|+ +.+++.|++ .+|++++.+|+++ ..+ . ||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888899999999 888887763 3689999999765 233 3 8988
Q ss_pred HH---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 212 LF---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 212 ~~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
++ .++++++++|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP---GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC---CcEEEEe
Confidence 85 789999999999 7766654
No 206
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.81 E-value=1.3e-09 Score=91.45 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=67.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C---CCeEEEeCCCCC-C--C--Cc-chhHHH
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----A---DNLKYIAGDMLR-F--I--PP-ANAFLF 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~---~ri~~~~~D~~~-~--~--p~-~D~i~~ 213 (301)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.|++ . ++++++.+|+.+ . . .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 457999999999999999887753 58999999 889888774 1 689999999865 2 1 25 898886
Q ss_pred ----------HHHHHH--HHhcccCCCCcEEEEEee
Q 043533 214 ----------KILKKR--REAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ----------~iL~~~--~~aL~p~~~gg~l~i~e~ 237 (301)
.+++.+ .+.|+| ||.+++...
T Consensus 132 ~~~~~~~~~~~~l~~~~~~~~Lkp---gG~l~i~~~ 164 (201)
T 2ift_A 132 DPPFHFNLAEQAISLLCENNWLKP---NALIYVETE 164 (201)
T ss_dssp CCCSSSCHHHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred CCCCCCccHHHHHHHHHhcCccCC---CcEEEEEEC
Confidence 778888 556999 787766554
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.81 E-value=8.3e-10 Score=94.27 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=71.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCC------CCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCCCc-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFP------GIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRFIPP- 207 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P------~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~~p~- 207 (301)
.....+|||||||+|.++..+++..+ ..+++++|+ +++++.+++ .++++++.+|..++++.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 45567999999999999999998765 369999999 888887764 25899999999875542
Q ss_pred --chhHHH-----HHHHHHHHhcccCCCCcEEEEEe
Q 043533 208 --ANAFLF-----KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 208 --~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
||+|++ .+++++.+.|+| ||++++.-
T Consensus 162 ~~fD~I~~~~~~~~~~~~~~~~Lkp---gG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTPTELINQLAS---GGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCCHHHHHTEEE---EEEEEEEE
T ss_pred CCccEEEECCchHHHHHHHHHHhcC---CCEEEEEE
Confidence 999987 788999999999 78777653
No 208
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.81 E-value=2.6e-09 Score=89.74 Aligned_cols=85 Identities=9% Similarity=0.127 Sum_probs=67.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC--CCC-c-chhHHH----
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR--FIP-P-ANAFLF---- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~--~~p-~-~D~i~~---- 213 (301)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +.+ . ||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 457999999999999999888753 48999999 889888774 2589999999876 333 3 898886
Q ss_pred ------HHHHHHHHh--cccCCCCcEEEEEee
Q 043533 214 ------KILKKRREA--IASNGERGKVIIIDI 237 (301)
Q Consensus 214 ------~iL~~~~~a--L~p~~~gg~l~i~e~ 237 (301)
.+++.+.+. |+| ||.+++...
T Consensus 133 ~~~~~~~~l~~l~~~~~L~p---gG~l~i~~~ 161 (202)
T 2fpo_A 133 RRGLLEETINLLEDNGWLAD---EALIYVESE 161 (202)
T ss_dssp STTTHHHHHHHHHHTTCEEE---EEEEEEEEE
T ss_pred CCCcHHHHHHHHHhcCccCC---CcEEEEEEC
Confidence 678888764 999 777665543
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.80 E-value=7.4e-09 Score=85.83 Aligned_cols=84 Identities=14% Similarity=0.220 Sum_probs=66.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCC---------CeEEEeechHHHhcCCCCCCeEEE-eCCCCC-C--------CC-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPG---------IKCTVLDLPHAVANLPEADNLKYI-AGDMLR-F--------IP- 206 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~---------~~~~~~Dlp~~~~~a~~~~ri~~~-~~D~~~-~--------~p- 206 (301)
+....+|||||||+|.++..++++++. .+++++|+.++. ..++++++ .+|+.. + ++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 455789999999999999999999865 899999995431 13578999 899876 2 23
Q ss_pred -cchhHHH----------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 207 -PANAFLF----------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 -~~D~i~~----------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.||+|++ .++++++++|+| ||++++...
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP---GGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC---CCEEEEEec
Confidence 2888772 679999999999 888877654
No 210
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.78 E-value=4.9e-09 Score=94.26 Aligned_cols=94 Identities=10% Similarity=0.076 Sum_probs=74.5
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C-CCc-ch
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F-IPP-AN 209 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~-~p~-~D 209 (301)
..++ .....+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+++++.+|+.+ + .+. ||
T Consensus 112 ~~l~--~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 112 VALD--PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp HHHC--CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE
T ss_pred HHhC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCC
Confidence 4444 56678999999999999999999875 589999999 888877764 3479999999876 3 233 78
Q ss_pred hHHH---------------------------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 210 AFLF---------------------------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 210 ~i~~---------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
+|++ ++|+++++.|+| ||++++....+
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp---GG~lv~stcs~ 249 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP---GGILVYSTCSL 249 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEeCCC
Confidence 7663 789999999999 88887765433
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.78 E-value=1.8e-09 Score=95.74 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=70.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF---IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~---~p~-~D~i~ 212 (301)
+...+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+.+. .+. ||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999999999999998888899999999 888876653 36899999998652 233 88887
Q ss_pred H---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 213 F---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 213 ~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+ .++++++++|+| ||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 5 889999999999 7766655
No 212
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.77 E-value=6.2e-09 Score=95.81 Aligned_cols=108 Identities=12% Similarity=0.068 Sum_probs=81.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC-c-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP-P-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p-~-~D~i~~-- 213 (301)
+.+..+|||+|||+|.+++.++...+..+++++|+ +.+++.|++ .++|+++.+|+.+ +.+ . +|+|++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 35568999999999999999999988779999999 899888875 2589999999987 554 2 787765
Q ss_pred -----------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHH
Q 043533 214 -----------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKL 276 (301)
Q Consensus 214 -----------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~l 276 (301)
.+++.+++.| + |+ ++++.. +.+.+++.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l-~---g~-~~~i~~-------------------------------~~~~~~~~ 338 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL-E---KR-GVFITT-------------------------------EKKAIEEA 338 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE-E---EE-EEEEES-------------------------------CHHHHHHH
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc-C---Ce-EEEEEC-------------------------------CHHHHHHH
Confidence 4556666666 4 23 222211 34556678
Q ss_pred HHhCCCceeEEEec
Q 043533 277 FFDAVFSHYKITPI 290 (301)
Q Consensus 277 l~~aGf~~~~~~~~ 290 (301)
+.+.||+..+...+
T Consensus 339 ~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 339 IAENGFEIIHHRVI 352 (373)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHcCCEEEEEEEE
Confidence 88899998887766
No 213
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.77 E-value=2e-09 Score=95.99 Aligned_cols=85 Identities=8% Similarity=0.116 Sum_probs=69.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF---IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~---~p~-~D~i~ 212 (301)
....+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .+|++++.+|+.+. .+. ||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4468999999999999999999888889999999 888876653 36899999997652 233 88877
Q ss_pred H----------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 213 F----------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 213 ~----------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+ .++++++++|+| ||.+++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKE---DGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 4 688999999999 7766654
No 214
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.77 E-value=1e-08 Score=88.70 Aligned_cols=121 Identities=11% Similarity=0.004 Sum_probs=85.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF------ 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~------ 213 (301)
..+.+|||||||.|-++..+...+|..+++++|+ +.+++.++. +.+.++...|+.. +.+. +|++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 5578999999999999999999999999999999 888887764 5668899999988 4455 999865
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEeee-eCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 -------KILKKRREAIASNGERGKVIIIDIV-INAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e~~-~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
..+ ++.++|+| +|.++-++.- +..... . ++- .=...|++.+.+.|+..
T Consensus 211 Le~q~kg~g~-~ll~aL~~---~~vvVSfp~ksl~Grs~--------g-m~~----------~Y~~~~e~~~~~~g~~~- 266 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNS---PNIVVTFPTKSLGQRSK--------G-MFQ----------NYSQSFESQARERSCRI- 266 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSC---SEEEEEEECC---------------C-HHH----------HHHHHHHHHHHHHTCCE-
T ss_pred hhhhhhHHHH-HHHHHhCC---CCEEEeccchhhcCCCc--------c-hhh----------HHHHHHHHHHHhcCCce-
Confidence 555 89999999 5544444431 111110 0 100 11466888899999944
Q ss_pred EEEecCC
Q 043533 286 KITPIFG 292 (301)
Q Consensus 286 ~~~~~~~ 292 (301)
+...+++
T Consensus 267 ~~~~~~n 273 (281)
T 3lcv_B 267 QRLEIGN 273 (281)
T ss_dssp EEEEETT
T ss_pred eeeeecC
Confidence 4344433
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.76 E-value=2e-09 Score=95.29 Aligned_cols=84 Identities=13% Similarity=0.215 Sum_probs=68.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC----------------CCCCeEEEeCCCCCCC--Cc-
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP----------------EADNLKYIAGDMLRFI--PP- 207 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~----------------~~~ri~~~~~D~~~~~--p~- 207 (301)
....+|||||||+|.++..++++ |..+++++|+ |.+++.|+ ..+|++++.+|..+.+ +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45689999999999999999998 8889999999 88877654 2468999999975421 33
Q ss_pred chhHHH---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 208 ANAFLF---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 208 ~D~i~~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
||+|++ .++++++++|+| ||.+++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNN---PGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEE---EEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 888775 679999999999 7766554
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.76 E-value=1.5e-09 Score=97.85 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=69.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF---IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~---~p~-~D~i~ 212 (301)
+...+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+++. .+. ||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999998878899999999 888876653 36899999998652 233 88887
Q ss_pred H---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 213 F---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 213 ~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+ .++++++++|+| ||.+++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 4 789999999999 6766554
No 217
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.75 E-value=1.3e-08 Score=89.62 Aligned_cols=113 Identities=14% Similarity=0.043 Sum_probs=86.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC-c-chhHHH---
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIP-P-ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p-~-~D~i~~--- 213 (301)
+..+.+|||+|||+|.+++.++++. ..+++++|+ |.+++.+++ .++|+++.+|.++-.+ . ||.|+|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 4567899999999999999999874 578999999 888887764 6889999999987323 3 998888
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
..|..+.+.|++ ||.+.+++........ ....+.++++.++.|++..
T Consensus 202 ~~~~~~l~~a~~~lk~---gG~ih~~~~~~e~~~~----------------------~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 VRTHEFIPKALSIAKD---GAIIHYHNTVPEKLMP----------------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp SSGGGGHHHHHHHEEE---EEEEEEEEEEEGGGTT----------------------TTTHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHcCC---CCEEEEEeeecccccc----------------------hhHHHHHHHHHHHcCCcEE
Confidence 889999999999 7877666654321110 1234567788889998764
No 218
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.74 E-value=1.7e-09 Score=97.14 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=69.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMLRF---IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----------~~ri~~~~~D~~~~---~p~-~D~i~ 212 (301)
....+|||||||+|.++..+++..|..+++++|+ |.+++.|++ .+|++++.+|+.+. .+. ||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999999888899999999 888876653 36899999998752 223 88887
Q ss_pred H---------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 213 F---------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 213 ~---------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
+ .++++++++|+| ||.+++.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~Lkp---gG~lv~~ 221 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKE---DGILSSQ 221 (314)
T ss_dssp ECCC-------------HHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCC---CeEEEEE
Confidence 4 779999999999 7766654
No 219
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.72 E-value=6.7e-09 Score=91.45 Aligned_cols=94 Identities=9% Similarity=0.065 Sum_probs=73.9
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC-----C
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI-----P 206 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~-~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~-----p 206 (301)
..++ .....+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ ..+++++.+|+.+ +. +
T Consensus 77 ~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 77 IVLN--PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHC--CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTT
T ss_pred HHhC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcc
Confidence 4444 566789999999999999999999876 89999999 777776654 3489999999865 32 3
Q ss_pred c-chhHHH-----------------------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 207 P-ANAFLF-----------------------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 207 ~-~D~i~~-----------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
. ||+|++ ++|+++++.|+| ||++++....+
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~stcs~ 214 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK---DGELVYSTCSM 214 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECCC
Confidence 3 777653 689999999999 88877766543
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.69 E-value=3.6e-09 Score=95.13 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=70.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCC---CCc-chhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRF---IPP-ANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~---~p~-~D~i 211 (301)
+...+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+.+. .+. ||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999888889999999 888876653 36899999998652 233 8877
Q ss_pred HH------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 212 LF------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 212 ~~------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
++ .++++++++|+| ||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP---GGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCC---CcEEEEEc
Confidence 64 579999999999 78777653
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.68 E-value=1.1e-08 Score=89.64 Aligned_cols=84 Identities=15% Similarity=0.087 Sum_probs=63.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--eCCCCC-CCCc-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE--AD------NLKYI--AGDMLR-FIPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~--~~------ri~~~--~~D~~~-~~p~-~D~i~~- 213 (301)
+.+..+|||||||+|.++..++++ .+++++|+..++..+++ .. +++++ .+|+.+ + +. +|+|++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~sd 147 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIMCD 147 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEEEC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEEEe
Confidence 455679999999999999999887 68999999446443332 11 68999 899976 4 33 787765
Q ss_pred ----------------HHHHHHHHhcccCCCCc--EEEEEee
Q 043533 214 ----------------KILKKRREAIASNGERG--KVIIIDI 237 (301)
Q Consensus 214 ----------------~iL~~~~~aL~p~~~gg--~l~i~e~ 237 (301)
.+|+.++++|+| || .+++-..
T Consensus 148 ~~~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~fv~kv~ 186 (265)
T 2oxt_A 148 VGESSPKWSVESERTIKILELLEKWKVK---NPSADFVVKVL 186 (265)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEES
T ss_pred CcccCCccchhHHHHHHHHHHHHHHhcc---CCCeEEEEEeC
Confidence 278999999999 88 7776443
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.67 E-value=9.6e-09 Score=90.63 Aligned_cols=83 Identities=19% Similarity=0.119 Sum_probs=63.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--eCCCCC-CCCc-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE--AD------NLKYI--AGDMLR-FIPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~--~~------ri~~~--~~D~~~-~~p~-~D~i~~- 213 (301)
+.+..+|||||||+|.++..++++ .+++++|+..++..+++ .. +++++ .+|+.+ + +. ||+|++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvsd 155 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLCD 155 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEEC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEEC
Confidence 455679999999999999999987 58999999446443332 11 78999 999876 4 33 787765
Q ss_pred ----------------HHHHHHHHhcccCCCCc--EEEEEe
Q 043533 214 ----------------KILKKRREAIASNGERG--KVIIID 236 (301)
Q Consensus 214 ----------------~iL~~~~~aL~p~~~gg--~l~i~e 236 (301)
.+|+.++++|+| || .+++..
T Consensus 156 ~~~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~~v~~~ 193 (276)
T 2wa2_A 156 IGESNPTAAVEASRTLTVLNVISRWLEY---NQGCGFCVKV 193 (276)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHH---STTCEEEEEE
T ss_pred CCcCCCchhhhHHHHHHHHHHHHHHhcc---CCCcEEEEEe
Confidence 368999999999 88 777743
No 223
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.66 E-value=1.7e-08 Score=90.39 Aligned_cols=87 Identities=14% Similarity=0.208 Sum_probs=63.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-----hHHHhcCCC----CCCeEEEeC-CCCC-CCCcchhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-----PHAVANLPE----ADNLKYIAG-DMLR-FIPPANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-----p~~~~~a~~----~~ri~~~~~-D~~~-~~p~~D~i~~-- 213 (301)
+.+..+|||||||+|.++..++++ .+++++|+ +..++.+.. .++|+++.+ |+.. +...+|+|++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 455679999999999999999987 47999998 544433321 267999999 9876 3323777765
Q ss_pred ---------------HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 214 ---------------KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 214 ---------------~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
.+|+.++++|+| ||.+++ ....+
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lkp---GG~~v~-kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSN---NTQFCV-KVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCT---TCEEEE-EESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCC---CCEEEE-EeCCC
Confidence 368889999999 886665 44333
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.64 E-value=1.2e-08 Score=90.51 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=59.7
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FI 205 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~ 205 (301)
+..++ +.++ .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ ++
T Consensus 17 ~~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 17 INSII-DKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHH-HHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHH-HhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 45566 6665 5667899999999999999999985 48999999 888876654 1589999999987 67
Q ss_pred CcchhHHH
Q 043533 206 PPANAFLF 213 (301)
Q Consensus 206 p~~D~i~~ 213 (301)
+.+|+|++
T Consensus 92 ~~fD~vv~ 99 (285)
T 1zq9_A 92 PFFDTCVA 99 (285)
T ss_dssp CCCSEEEE
T ss_pred hhhcEEEE
Confidence 77887765
No 225
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.62 E-value=4.3e-08 Score=91.15 Aligned_cols=94 Identities=19% Similarity=0.240 Sum_probs=73.1
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC-c-chh
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIP-P-ANA 210 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p-~-~D~ 210 (301)
+..++ +.+. .....+|||+|||+|.++..+++++ +..+++++|+ +.+++.| .+++++.+|+++..+ . ||+
T Consensus 28 ~~~~~-~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~ 101 (421)
T 2ih2_A 28 VDFMV-SLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDL 101 (421)
T ss_dssp HHHHH-HHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEE
T ss_pred HHHHH-Hhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCE
Confidence 34455 5554 3345699999999999999999987 6789999999 8888776 689999999987322 3 787
Q ss_pred HHH----------------------------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 211 FLF----------------------------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 211 i~~----------------------------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
|++ .+++++.+.|+| ||+++++-+
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---~G~~~~i~p 165 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP---GGVLVFVVP 165 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC---CCEEEEEEC
Confidence 765 348889999999 888777654
No 226
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.62 E-value=5.4e-10 Score=96.11 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=85.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C--CCeEEEeCCCCC-CCCc-chhHHH-----
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----A--DNLKYIAGDMLR-FIPP-ANAFLF----- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~--~ri~~~~~D~~~-~~p~-~D~i~~----- 213 (301)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ . ++++++.+|+.+ +.+. ||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 57899999999999999999974 89999999 888888774 1 589999999987 4223 999887
Q ss_pred ------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEE
Q 043533 214 ------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKI 287 (301)
Q Consensus 214 ------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 287 (301)
..+.+++++|+| ||. ++++...... -+..+. -.+....+++..++...|.-.+..
T Consensus 156 ~~~~~~~~~~~~~~~L~p---gG~-~i~~~~~~~~------------~~~~~~---lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSP---DGF-EIFRLSKKIT------------NNIVYF---LPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp SGGGGGSSSBCTTTSCSS---CHH-HHHHHHHHHC------------SCEEEE---EETTBCHHHHHHTTCTTCCEEEEE
T ss_pred CcchhhhHHHHHHhhcCC---cce-eHHHHHHhhC------------CceEEE---CCCCCCHHHHHHHhccCCCEEEEe
Confidence 366678889999 786 3333211000 000000 012335677778888777766665
Q ss_pred EecCC
Q 043533 288 TPIFG 292 (301)
Q Consensus 288 ~~~~~ 292 (301)
....+
T Consensus 217 ~~~~~ 221 (241)
T 3gdh_A 217 NFLNN 221 (241)
T ss_dssp EEETT
T ss_pred hhhcC
Confidence 55544
No 227
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.62 E-value=3.9e-08 Score=84.24 Aligned_cols=81 Identities=9% Similarity=0.005 Sum_probs=66.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCCc-chhHHH------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-FIPP-ANAFLF------ 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~~p~-~D~i~~------ 213 (301)
..+.+|||||||+|-++..+. |..+++++|+ +.+++.++. +.+.++..+|... +.|. +|++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 557899999999999999988 8999999999 888888775 6778899999987 6666 999865
Q ss_pred -------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 -------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 -------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.++ ++.++|++ ++ ++|.-
T Consensus 181 LE~q~~~~~~-~ll~aL~~---~~-vvVsf 205 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNT---PR-MAVSF 205 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBC---SE-EEEEE
T ss_pred hhhhchhhHH-HHHHHhcC---CC-EEEEc
Confidence 444 88889999 44 54443
No 228
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.60 E-value=5.5e-08 Score=91.64 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=76.4
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC-c-
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IP-P- 207 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~-~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p-~- 207 (301)
..++ .....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ .++++++.+|+.+ + ++ .
T Consensus 253 ~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 253 IVLD--PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp HHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred HhcC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCC
Confidence 4444 566789999999999999999999887 89999999 777766653 3579999999976 3 44 3
Q ss_pred chhHHH---------------------------------HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 208 ANAFLF---------------------------------KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 208 ~D~i~~---------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
||+|++ ++|+++.+.|+| ||++++.+..+.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~lvy~tcs~~ 393 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP---GGRLLYTTCSIF 393 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCC
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCCC
Confidence 888873 589999999999 898888776443
No 229
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.54 E-value=1e-07 Score=84.20 Aligned_cols=87 Identities=13% Similarity=0.122 Sum_probs=64.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec--hHHHhcCCC------------C----CCeEEEeCCCCCC---C
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL--PHAVANLPE------------A----DNLKYIAGDMLRF---I 205 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl--p~~~~~a~~------------~----~ri~~~~~D~~~~---~ 205 (301)
.....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ . ++++++..|+.+. +
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 3456799999999999999888864 348999999 577765542 1 4788886665431 2
Q ss_pred -----Cc-chhHHH-----------HHHHHHHHhcc---cCCCCcEEEEE
Q 043533 206 -----PP-ANAFLF-----------KILKKRREAIA---SNGERGKVIII 235 (301)
Q Consensus 206 -----p~-~D~i~~-----------~iL~~~~~aL~---p~~~gg~l~i~ 235 (301)
+. ||+|++ .+++.+++.|+ | ++||+++++
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p-~~gG~l~v~ 204 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPAN-DPTAVALVT 204 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTT-CTTCEEEEE
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCC-CCCCEEEEE
Confidence 23 898875 89999999999 7 346876663
No 230
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.53 E-value=3.5e-08 Score=89.42 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=71.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCcchhHHH------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFIPPANAFLF------ 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~p~~D~i~~------ 213 (301)
....+|||+|||+|.++.. ++ ...+++++|+ |.+++.+++ .++++++.+|+++....||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~~~ 270 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKFA 270 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTTTG
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcHhH
Confidence 4568999999999999999 76 4779999999 888887764 36899999999874444999888
Q ss_pred -HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 -KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 -~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
.+++.+.+.|+| ||.+++.+...
T Consensus 271 ~~~l~~~~~~L~~---gG~l~~~~~~~ 294 (336)
T 2yx1_A 271 HKFIDKALDIVEE---GGVIHYYTIGK 294 (336)
T ss_dssp GGGHHHHHHHEEE---EEEEEEEEEES
T ss_pred HHHHHHHHHHcCC---CCEEEEEEeec
Confidence 899999999999 78777777643
No 231
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.53 E-value=3.5e-08 Score=89.33 Aligned_cols=84 Identities=18% Similarity=0.223 Sum_probs=67.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEeCCCCCCC------C-cchhHH
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------AD-NLKYIAGDMLRFI------P-PANAFL 212 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~-ri~~~~~D~~~~~------p-~~D~i~ 212 (301)
...+|||+|||+|.++..+++... +++++|+ +.+++.+++ .+ +++++.+|+++.. . .||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 457999999999999999998754 9999999 888887764 22 5999999987621 2 388775
Q ss_pred H---------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 213 F---------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 213 ~---------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+ .+++++.+.|+| ||.+++...
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkp---gG~lli~~~ 273 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSP---KALGLVLTA 273 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCT---TCCEEEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCc---CcEEEEEEC
Confidence 4 789999999999 887666543
No 232
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.52 E-value=3e-08 Score=92.84 Aligned_cols=90 Identities=12% Similarity=0.136 Sum_probs=72.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-C--CC-c-chhHHH--
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR-F--IP-P-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~-~--~p-~-~D~i~~-- 213 (301)
.....+|||+|||+|..+..+++..|+.+++++|+ +..++.+++ +-+++++.+|+.+ + ++ . ||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 55678999999999999999999999899999999 776666553 3358899999976 3 33 3 888862
Q ss_pred -------------------------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 -------------------------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 -------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
++|+++.+.|+| ||++++....+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp---GG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT---GGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE---EEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCC
Confidence 779999999999 88888877544
No 233
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.52 E-value=7.5e-08 Score=85.15 Aligned_cols=85 Identities=12% Similarity=0.221 Sum_probs=71.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC---Cc-chh
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMLRFI---PP-ANA 210 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------~~ri~~~~~D~~~~~---p~-~D~ 210 (301)
-+++++||-||||.|..+.++++..|..+++++|+ |.|++.+++ .+|++++.+|.++-+ +. ||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 36689999999999999999998877789999999 999887653 689999999988732 23 999
Q ss_pred HHH---------------HHHHHHHHhcccCCCCcEEEE
Q 043533 211 FLF---------------KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 211 i~~---------------~iL~~~~~aL~p~~~gg~l~i 234 (301)
|++ ..++.++++|+| ||.++.
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p---~Gv~v~ 196 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVA 196 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEE---EEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCC---CCEEEE
Confidence 987 899999999999 664444
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.46 E-value=5.2e-08 Score=91.81 Aligned_cols=91 Identities=11% Similarity=0.048 Sum_probs=72.3
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CCc-c
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IPP-A 208 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~-~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p~-~ 208 (301)
..++ .....+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ .. |.++.+|+.+ + .+. |
T Consensus 95 ~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 95 VLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp HHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCE
T ss_pred HhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccC
Confidence 4444 566789999999999999999999765 79999999 888877764 23 8999999765 2 334 8
Q ss_pred hhHHH---------------------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 209 NAFLF---------------------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 209 D~i~~---------------------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
|+|++ ++|+++.+.|+| ||+|+....
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvysTC 230 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP---GGVLVYSTC 230 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE---EEEEEEEES
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEec
Confidence 87772 799999999999 887776554
No 235
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.46 E-value=1.8e-07 Score=88.69 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=71.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CCc-chhHHH---
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IPP-ANAFLF--- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p~-~D~i~~--- 213 (301)
...+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+|+++.+|+.+ + .+. ||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 678999999999999999999875 579999999 788777664 3579999999876 3 344 787753
Q ss_pred ------------------------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 ------------------------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 ------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
++|+++.+.|+| ||+|++....+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP---GGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEecccC
Confidence 589999999999 88887765433
No 236
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.44 E-value=1.8e-07 Score=86.52 Aligned_cols=99 Identities=6% Similarity=-0.035 Sum_probs=74.0
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeE
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG--------------------------------------IKC 176 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--------------------------------------~~~ 176 (301)
+..++ .... +.+...|||.+||+|.++++.+....+ .++
T Consensus 190 Aa~ll-~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 190 AAALV-LLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHH-HHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHH-HHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 34455 5555 566789999999999999998876443 579
Q ss_pred EEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH---------------HHHHHHHHhcccCCCCcE
Q 043533 177 TVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF---------------KILKKRREAIASNGERGK 231 (301)
Q Consensus 177 ~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~---------------~iL~~~~~aL~p~~~gg~ 231 (301)
+++|+ +.+++.|+. .++|+++.+|+++ +.+. +|+|++ .+.+++.+.|++ -+|++
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~-~~g~~ 345 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR-MPTWS 345 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-CTTCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc-CCCCE
Confidence 99999 889888874 4579999999987 5555 898887 455555566654 23788
Q ss_pred EEEEee
Q 043533 232 VIIIDI 237 (301)
Q Consensus 232 l~i~e~ 237 (301)
++|+..
T Consensus 346 ~~iit~ 351 (393)
T 3k0b_A 346 VYVLTS 351 (393)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 888754
No 237
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.43 E-value=2.7e-07 Score=79.74 Aligned_cols=67 Identities=13% Similarity=0.318 Sum_probs=54.8
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p 206 (301)
...++ +.++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 19 ~~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 19 IDKIM-TNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHH-TTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC
T ss_pred HHHHH-HhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc
Confidence 44566 6555 5667899999999999999999986 68999999 888877654 3689999999987 665
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.42 E-value=6.9e-08 Score=90.80 Aligned_cols=93 Identities=11% Similarity=0.095 Sum_probs=72.6
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CCc-c
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-F--IPP-A 208 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~--~p~-~ 208 (301)
..++ .....+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ..+|.++.+|..+ + .+. |
T Consensus 99 ~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 99 TAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp HHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCE
T ss_pred HHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccC
Confidence 4445 56678999999999999999998865 479999999 777776664 3579999999765 2 334 7
Q ss_pred hhHHH---------------------------------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 209 NAFLF---------------------------------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 209 D~i~~---------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
|+|++ ++|+++.+.|+| ||+|+.....
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvYsTCs 236 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN---KGQLIYSTCT 236 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE---EEEEEEEESC
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEee
Confidence 87753 789999999999 8887765543
No 239
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.42 E-value=2.2e-07 Score=82.59 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=60.9
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc-
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP- 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~- 207 (301)
+..++ +.++ .....+|||||||+|.++..|+++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 39 ~~~Iv-~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 39 VNKAV-ESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGS
T ss_pred HHHHH-HhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccC
Confidence 45566 6665 666789999999999999999998 468999999 888887765 4789999999988 7765
Q ss_pred -chhHHH
Q 043533 208 -ANAFLF 213 (301)
Q Consensus 208 -~D~i~~ 213 (301)
+|+|++
T Consensus 114 ~fD~Iv~ 120 (295)
T 3gru_A 114 DFNKVVA 120 (295)
T ss_dssp CCSEEEE
T ss_pred CccEEEE
Confidence 787765
No 240
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.41 E-value=3.2e-07 Score=84.52 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=75.3
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeE
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG--------------------------------------IKC 176 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--------------------------------------~~~ 176 (301)
+..++ .... +.+...|+|.+||+|.++++.+....+ .++
T Consensus 183 Aaall-~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 183 AAAII-LLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHH-HHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHH-HHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34455 5555 566789999999999999998875443 579
Q ss_pred EEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH---------------HHHHHHHHhcccCCCCcE
Q 043533 177 TVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF---------------KILKKRREAIASNGERGK 231 (301)
Q Consensus 177 ~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~---------------~iL~~~~~aL~p~~~gg~ 231 (301)
+++|+ +.+++.|+. .++|+++.+|+++ +.+. +|+|++ .+.+++.+.|++ -+|++
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~-~~g~~ 338 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP-LKTWS 338 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT-CTTSE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh-CCCcE
Confidence 99999 889888874 4579999999987 5554 898887 566666666664 33788
Q ss_pred EEEEee
Q 043533 232 VIIIDI 237 (301)
Q Consensus 232 l~i~e~ 237 (301)
++|+..
T Consensus 339 ~~iit~ 344 (384)
T 3ldg_A 339 QFILTN 344 (384)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 888764
No 241
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.40 E-value=1.8e-07 Score=86.36 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=73.9
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeE
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG--------------------------------------IKC 176 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--------------------------------------~~~ 176 (301)
+..++ .... +.+..+|||++||+|.++++++....+ .++
T Consensus 184 Aa~ll-~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 184 AAGLI-YLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHH-HTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHH-HhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34455 5555 566789999999999999999876332 679
Q ss_pred EEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH---------------HHHHHHHHhcccCCCCcE
Q 043533 177 TVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF---------------KILKKRREAIASNGERGK 231 (301)
Q Consensus 177 ~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~---------------~iL~~~~~aL~p~~~gg~ 231 (301)
+++|+ +.+++.|+. .++|+|..+|+++ +.+. +|+|++ .+.+++.+.|++ -+|++
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~-~~g~~ 339 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK-LKNWS 339 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-SBSCE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh-CCCCE
Confidence 99999 899988875 3479999999987 4554 898887 556666666654 23788
Q ss_pred EEEEee
Q 043533 232 VIIIDI 237 (301)
Q Consensus 232 l~i~e~ 237 (301)
++|+..
T Consensus 340 ~~iit~ 345 (385)
T 3ldu_A 340 YYLITS 345 (385)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 887754
No 242
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.40 E-value=1.6e-07 Score=78.24 Aligned_cols=65 Identities=18% Similarity=0.287 Sum_probs=53.4
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCCCCc-chhHHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLRFIPP-ANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~~~p~-~D~i~~ 213 (301)
.....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+ +|. +|+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEE
Confidence 345689999999999999999987 5558999999 888887775 2389999999976 344 888876
No 243
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.39 E-value=3.5e-08 Score=85.28 Aligned_cols=94 Identities=12% Similarity=0.251 Sum_probs=71.1
Q ss_pred chHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC-
Q 043533 134 MTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIP- 206 (301)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p- 206 (301)
....++ +.++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 17 ~~~~i~-~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 17 VLNQII-KQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp THHHHH-HHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCC
T ss_pred HHHHHH-HhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCccc
Confidence 345566 6665 5667899999999999999999985 78999999 888888876 3689999999987 655
Q ss_pred -c-chhH-----------HHHHH--------------HHHHHhcccCCCCcEEEEE
Q 043533 207 -P-ANAF-----------LFKIL--------------KKRREAIASNGERGKVIII 235 (301)
Q Consensus 207 -~-~D~i-----------~~~iL--------------~~~~~aL~p~~~gg~l~i~ 235 (301)
. ++++ +..++ +.+.+.|+| ||++.++
T Consensus 92 ~~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~---~G~l~v~ 144 (245)
T 1yub_A 92 KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI---HRTLGLL 144 (245)
T ss_dssp SSEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG---GGSHHHH
T ss_pred CCCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC---CCchhhh
Confidence 2 5221 11333 558889998 7877654
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.37 E-value=1.5e-07 Score=83.92 Aligned_cols=74 Identities=14% Similarity=0.298 Sum_probs=55.7
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~p 206 (301)
...++ +.++ .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +.+
T Consensus 31 ~~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 31 LDKII-YAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHH-HHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred HHHHH-HhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 45566 6665 566789999999999999999987 468999999 888877664 2689999999987 666
Q ss_pred cchhHHH
Q 043533 207 PANAFLF 213 (301)
Q Consensus 207 ~~D~i~~ 213 (301)
.+|+|++
T Consensus 106 ~~D~Vv~ 112 (299)
T 2h1r_A 106 KFDVCTA 112 (299)
T ss_dssp CCSEEEE
T ss_pred cCCEEEE
Confidence 6887776
No 245
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.37 E-value=8.1e-08 Score=88.70 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=66.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEeCCCCCCC------C-cchhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------AD-NLKYIAGDMLRFI------P-PANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~-ri~~~~~D~~~~~------p-~~D~i 211 (301)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ .+ +++|+.+|+++.+ . .||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456899999999999999999863 348999999 888887764 23 8999999987621 2 38887
Q ss_pred HH--------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 212 LF--------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 212 ~~--------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
++ ++++.+.+.|+| ||.+++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p---gG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE---NGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 75 477888999999 77665543
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.35 E-value=3.2e-07 Score=81.24 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=61.2
Q ss_pred ccCCCeEEEecC------CccHHHHHHHHHCC-CCeEEEeechHHHhcCCCCCCeEE-EeCCCCC-CCCc-chhHHH---
Q 043533 147 FEGLGSLVDVGG------GNVSFSRIISEAFP-GIKCTVLDLPHAVANLPEADNLKY-IAGDMLR-FIPP-ANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGg------G~G~~~~~l~~~~P-~~~~~~~Dlp~~~~~a~~~~ri~~-~~~D~~~-~~p~-~D~i~~--- 213 (301)
+....+|||||| |+|. ..+++..| +.+++++|+.+.+ +++++ +.+|+.+ +++. ||+|++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC
Confidence 566789999999 4477 55566766 6899999993332 47889 9999987 5554 888775
Q ss_pred -------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 -------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 -------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+|++++++|+| ||++++..
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp---GG~~v~~~ 171 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKI 171 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCC---CcEEEEEE
Confidence 589999999999 88887754
No 247
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.34 E-value=2e-07 Score=86.27 Aligned_cols=84 Identities=13% Similarity=0.088 Sum_probs=65.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCC---CCc-chhHHH-----
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRF---IPP-ANAFLF----- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~---~p~-~D~i~~----- 213 (301)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ +-...+..+|+++. .+. ||+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 36899999999999999999974 44999999 888887774 22235668898762 233 888874
Q ss_pred ---------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++.+.+.|+| ||.++++..
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~Lkp---GG~Lv~~s~ 327 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAE---EGFLWLSSC 327 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEEC
Confidence 889999999999 887776654
No 248
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.31 E-value=9.4e-08 Score=88.49 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=68.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC------Cc-chhHHH
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLRFI------PP-ANAFLF 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~~~------p~-~D~i~~ 213 (301)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+++.. +. ||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6789999999999999999987 4458999999 888887764 238999999987621 22 787765
Q ss_pred --------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 --------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 --------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++++.+.|+| ||.+++...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD---GGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE---EEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 688999999999 787776654
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.31 E-value=9.5e-07 Score=82.51 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=64.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCCc-chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFIPP-ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~p~-~D~i~~----- 213 (301)
..+..+|||+|||+|.++..+++. ..+++++|+ +++++.|++ -+ ++|+.+|+++..+. ||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCcc
Confidence 455689999999999999999987 458999999 888888774 23 99999999875454 999988
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 ----KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.+++.+. .|+| +|.+++.
T Consensus 365 g~~~~~~~~l~-~l~p---~givyvs 386 (425)
T 2jjq_A 365 GLHPRLVKRLN-REKP---GVIVYVS 386 (425)
T ss_dssp CSCHHHHHHHH-HHCC---SEEEEEE
T ss_pred chHHHHHHHHH-hcCC---CcEEEEE
Confidence 4666665 5899 6655553
No 250
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.31 E-value=2.7e-07 Score=89.41 Aligned_cols=90 Identities=11% Similarity=0.161 Sum_probs=68.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C--CCeEEEeCCCCC---CCC-c-chhHHH-
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----A--DNLKYIAGDMLR---FIP-P-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~--~ri~~~~~D~~~---~~p-~-~D~i~~- 213 (301)
+..+.+|||||||.|.++..|++. +.+++++|+ +.+++.|+. . -+|+|..+|+.+ +.+ . ||+|++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 345679999999999999999998 678999999 888887763 2 369999998854 233 3 999987
Q ss_pred ------------HHHHHHHHhcccCCCCcEEEEEeeeeCC
Q 043533 214 ------------KILKKRREAIASNGERGKVIIIDIVINA 241 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~ 241 (301)
.-+.++.+.|++ +++.+++.....+
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~---~~~~~~~~~~~~e 178 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLAD---VTQAVILELAVKE 178 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHH---HSSEEEEECCCTT
T ss_pred cchhcCCCHHHHHHHHHHHHHhcc---ccceeeEEecccc
Confidence 334456777888 6777777665443
No 251
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.31 E-value=2.7e-07 Score=83.76 Aligned_cols=85 Identities=8% Similarity=0.101 Sum_probs=69.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC-c-chhHHH--
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPG-----IKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIP-P-ANAFLF-- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~-----~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p-~-~D~i~~-- 213 (301)
...+|||+|||+|.++..+++..+. .+++++|+ +.+++.|+. +.++.++.+|.+.+.+ . ||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 4579999999999999999998765 78999999 888877764 3468999999987543 3 887765
Q ss_pred ---------------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 ---------------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ---------------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+++++.+.|+| ||+++++-
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~---gG~~~~v~ 256 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP---GGYLFFLV 256 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC---CCEEEEEE
Confidence 368999999999 88777765
No 252
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.30 E-value=9.7e-08 Score=88.03 Aligned_cols=84 Identities=10% Similarity=0.090 Sum_probs=68.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC------Cc-chhHHH-
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFI------PP-ANAFLF- 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~------p~-~D~i~~- 213 (301)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ -++++++.+|+++.. +. ||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999998 568999999 888887764 245999999987621 33 787776
Q ss_pred -------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++++.+.|+| ||.+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKE---GGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEEC
Confidence 588999999999 787776653
No 253
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.30 E-value=3.8e-07 Score=80.08 Aligned_cols=73 Identities=16% Similarity=0.108 Sum_probs=57.2
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCCc--
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMLR-FIPP-- 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---~~ri~~~~~D~~~-~~p~-- 207 (301)
+..++ +..+ .... +|||||||+|.++..|+++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 36 ~~~Iv-~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 36 LRRIV-EAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHH-HHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSC
T ss_pred HHHHH-HhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhcc
Confidence 34566 6665 5666 99999999999999999985 68999999 888877654 4689999999987 6652
Q ss_pred -chhHHH
Q 043533 208 -ANAFLF 213 (301)
Q Consensus 208 -~D~i~~ 213 (301)
+|.|+.
T Consensus 110 ~~~~iv~ 116 (271)
T 3fut_A 110 QGSLLVA 116 (271)
T ss_dssp TTEEEEE
T ss_pred CccEEEe
Confidence 555544
No 254
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.28 E-value=5e-07 Score=87.86 Aligned_cols=113 Identities=13% Similarity=0.206 Sum_probs=79.7
Q ss_pred hhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhc--ccCCCeEEEecCCccHHHHHHH---HHC-CCCeEEEeech
Q 043533 109 FWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQI--FEGLGSLVDVGGGNVSFSRIIS---EAF-PGIKCTVLDLP 182 (301)
Q Consensus 109 ~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~--~~~~~~vlDvGgG~G~~~~~l~---~~~-P~~~~~~~Dlp 182 (301)
.||-+++|+-.-..|++|+.. .+. +..+.. -.+...|+|||||+|-+....+ ++. -++++.+++-.
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~-------Al~-d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEkn 394 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYK-------CLL-DRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 394 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH-------HHH-HHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred hhhhhcCChhhHHHHHHHHHH-------HHH-HhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 578888888777778887642 133 332211 1223579999999999844433 332 23478999986
Q ss_pred HHHhcCCC-------CCCeEEEeCCCCC-CCCc-chhHHH-------------HHHHHHHHhcccCCCCcEE
Q 043533 183 HAVANLPE-------ADNLKYIAGDMLR-FIPP-ANAFLF-------------KILKKRREAIASNGERGKV 232 (301)
Q Consensus 183 ~~~~~a~~-------~~ri~~~~~D~~~-~~p~-~D~i~~-------------~iL~~~~~aL~p~~~gg~l 232 (301)
.++..+++ .++|+++.||+.+ .+|+ +|+|++ .+|....+.|+| ||.+
T Consensus 395 p~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKP---gGim 463 (637)
T 4gqb_A 395 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKD---DGVS 463 (637)
T ss_dssp HHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEE---EEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCC---CcEE
Confidence 56666554 7899999999998 8898 999987 777777788999 6643
No 255
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.27 E-value=6.4e-07 Score=74.77 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=51.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCCc-chhHHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLRFIPP-ANAFLF 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~~~p~-~D~i~~ 213 (301)
....+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++ .-+++++.+|+.+ +|. +|+|++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~ 118 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIM 118 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEE
Confidence 3567999999999999999998843 48999999 888887764 1279999999976 343 888776
No 256
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.27 E-value=9.2e-07 Score=82.84 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=60.1
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC-----C--cchhHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRFI-----P--PANAFL 212 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~~-----p--~~D~i~ 212 (301)
..+..+|||+|||+|.++..+++. ..+++++|+ +++++.|+. -++++|+.+|+.+.+ + .||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 456689999999999999999987 678999999 888887764 258999999998732 2 289988
Q ss_pred H--------HHHHHHHHhccc
Q 043533 213 F--------KILKKRREAIAS 225 (301)
Q Consensus 213 ~--------~iL~~~~~aL~p 225 (301)
+ .+++.+.+ ++|
T Consensus 362 ~dPPr~g~~~~~~~l~~-~~p 381 (433)
T 1uwv_A 362 LDPARAGAAGVMQQIIK-LEP 381 (433)
T ss_dssp ECCCTTCCHHHHHHHHH-HCC
T ss_pred ECCCCccHHHHHHHHHh-cCC
Confidence 7 55555543 577
No 257
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.25 E-value=1.1e-06 Score=78.27 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=55.8
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMLR 203 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----~~ri~~~~~D~~~ 203 (301)
...++ +.++ .....+|||+|||+|.++..+++++|+.+++++|. +.+++.|++ ++|++++.+|+.+
T Consensus 15 l~e~l-~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVI-EFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE 86 (301)
T ss_dssp HHHHH-HHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG
T ss_pred HHHHH-HhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence 45566 6665 56678999999999999999999999899999999 889887764 3799999999853
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.23 E-value=3.3e-07 Score=83.22 Aligned_cols=85 Identities=12% Similarity=0.148 Sum_probs=63.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------C---CCeEEEeCCCCCCC------C
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------A---DNLKYIAGDMLRFI------P 206 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-----------~---~ri~~~~~D~~~~~------p 206 (301)
+++++|||||||+|.++..++++.| .+++++|+ |.+++.+++ . +|++++.+|.++-+ +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4578999999999999999998765 78999999 888887753 0 27999999987611 2
Q ss_pred c-chhHHH-----------------HHHHHH----HHhcccCCCCcEEEEEee
Q 043533 207 P-ANAFLF-----------------KILKKR----REAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 ~-~D~i~~-----------------~iL~~~----~~aL~p~~~gg~l~i~e~ 237 (301)
. ||+|++ ..++.+ +++|+| || ++++..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p---gG-ilv~qs 314 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DG-KYFTQG 314 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EE-EEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC---Cc-EEEEEc
Confidence 2 666644 444555 899999 56 445444
No 259
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.23 E-value=3.9e-07 Score=90.32 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=67.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C-CCeEEEeCCCCCC---CCc-chhHHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A-DNLKYIAGDMLRF---IPP-ANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------~-~ri~~~~~D~~~~---~p~-~D~i~~ 213 (301)
.....+|||+|||+|.++..+++... .+++++|+ +.+++.+++ . ++++++.+|+++. ... ||+|++
T Consensus 537 ~~~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 537 MSKGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp HCTTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred hcCCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 34568999999999999999998543 47999999 888887764 2 5899999998862 223 888875
Q ss_pred ----------------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 ----------------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ----------------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.+++++.+.|+| ||.+++.
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp---gG~L~~s 656 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA---GGTIMFS 656 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCC---CcEEEEE
Confidence 679999999999 7766643
No 260
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.22 E-value=2.4e-07 Score=85.76 Aligned_cols=85 Identities=7% Similarity=0.056 Sum_probs=67.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C-C-CeEEEeCCCCCCC------C-cchhH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------A-D-NLKYIAGDMLRFI------P-PANAF 211 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~-~-ri~~~~~D~~~~~------p-~~D~i 211 (301)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ - + +++++.+|+++.. + .||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 456899999999999999999875 458999999 888887764 2 3 7999999987621 2 38887
Q ss_pred HH--------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 212 LF--------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 212 ~~--------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
++ .++.++.+.|+| ||.+++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 339 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNE---GGILLTFS 339 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 76 678889999999 77666544
No 261
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.22 E-value=4.2e-07 Score=80.19 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=56.8
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCC--CeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCCc
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPG--IKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~--~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~-~~p~ 207 (301)
...++ +.++ .....+|||||||+|.++..|+++.+. .+++++|+ +.+++.+++ .++++++.+|+.+ ++++
T Consensus 31 ~~~iv-~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 31 IDAIV-AAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHH-HHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHH-HhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 34466 6665 666789999999999999999998654 56999999 888888765 4789999999987 6654
No 262
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=1.2e-06 Score=75.90 Aligned_cols=69 Identities=25% Similarity=0.366 Sum_probs=56.1
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCCc
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~-~~p~ 207 (301)
...++ +.++ .....+|||||||+|.++..++++ +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++++
T Consensus 20 ~~~iv-~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 20 LKKIA-EELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHH-HHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGG
T ss_pred HHHHH-HhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhH
Confidence 44566 6665 566789999999999999999987 4579999999 888887765 4689999999987 6654
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.20 E-value=8.5e-07 Score=77.16 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=55.2
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIP 206 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p 206 (301)
+..++ +.++ .....+|||||||+|.++..|+++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 18 ~~~iv-~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 18 LQKIV-SAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHH-HHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred HHHHH-HhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 44566 6665 6667899999999999999999885 68999999 888887764 4799999999987 553
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.15 E-value=1e-06 Score=82.83 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=72.6
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC-----C---CC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-------------PGIKCTVLDL-PHAVANLPE-----A---DN 193 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-------------P~~~~~~~Dl-p~~~~~a~~-----~---~r 193 (301)
..++ +.+. .....+|+|.|||+|.++..+++.. +..+++++|+ |.++..|+. + .+
T Consensus 161 ~~mv-~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 161 QAMV-DCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHH-HHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHH-HHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 4445 5444 3456799999999999999988763 4578999999 887776653 1 26
Q ss_pred eEEEeCCCCC-CCCc-chhHHH----------------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 194 LKYIAGDMLR-FIPP-ANAFLF----------------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 194 i~~~~~D~~~-~~p~-~D~i~~----------------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+.+..+|.+. +... ||+|++ ..++++.+.|+| ||++.++-+
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT---GGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc---CCEEEEEEC
Confidence 7889999987 4433 888776 358999999999 898887764
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.10 E-value=9.1e-07 Score=81.35 Aligned_cols=85 Identities=11% Similarity=0.020 Sum_probs=68.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C-----------------CCeEEEeCCCCCC--
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----A-----------------DNLKYIAGDMLRF-- 204 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~-----------------~ri~~~~~D~~~~-- 204 (301)
...+|||+|||+|..++.++++.+..+++++|+ +++++.+++ . ++++++.+|+.+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467999999999999999999988889999999 777766653 1 2389999998652
Q ss_pred -CCc-chhHHH-------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 205 -IPP-ANAFLF-------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 205 -~p~-~D~i~~-------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+. ||+|++ .+|..+.+.++| ||.+++.-
T Consensus 127 ~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~---gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGSPMEFLDTALRSAKR---RGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred hccCCCCEEEeCCCCCHHHHHHHHHHhcCC---CCEEEEEe
Confidence 333 898887 899999999999 78665543
No 266
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.05 E-value=8.5e-07 Score=81.31 Aligned_cols=83 Identities=17% Similarity=0.279 Sum_probs=64.4
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC---CC-------------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLRF---IP------------- 206 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~~---~p------------- 206 (301)
..+|||+|||+|.++..+++.. .+++++|. +++++.|++ -++++|+.+|+.+- ++
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 4689999999999999998753 48999999 888887764 25899999998651 11
Q ss_pred ---cchhHHH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 207 ---PANAFLF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 207 ---~~D~i~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.||+|++ .+..++.+.|++ +|+++++..
T Consensus 292 ~~~~fD~Vv~dPPr~g~~~~~~~~l~~---~g~ivyvsc 327 (369)
T 3bt7_A 292 KSYQCETIFVDPPRSGLDSETEKMVQA---YPRILYISC 327 (369)
T ss_dssp GGCCEEEEEECCCTTCCCHHHHHHHTT---SSEEEEEES
T ss_pred ccCCCCEEEECcCccccHHHHHHHHhC---CCEEEEEEC
Confidence 4788887 356667777777 788877653
No 267
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.02 E-value=3.2e-06 Score=73.56 Aligned_cols=116 Identities=13% Similarity=0.107 Sum_probs=77.7
Q ss_pred CCCeEEEecCCccHHHHHHHHH-------CCC-----CeEEEeec-h---HHHhcC-----------C------------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEA-------FPG-----IKCTVLDL-P---HAVANL-----------P------------ 189 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~-------~P~-----~~~~~~Dl-p---~~~~~a-----------~------------ 189 (301)
+..+|||||+|+|..+..+++. +|+ ++++.+|. | +.+..+ +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3469999999999999887765 784 68999997 4 222211 1
Q ss_pred ------C--CCCeEEEeCCCCC--C-CC-----cchhHHH--------------HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 190 ------E--ADNLKYIAGDMLR--F-IP-----PANAFLF--------------KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 190 ------~--~~ri~~~~~D~~~--~-~p-----~~D~i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
. ..+++++.||+.+ + ++ .+|+|++ .+|+.+++.|+| ||.++.+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p---GG~l~tysa-- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP---GGTLATFTS-- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE---EEEEEESCC--
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC---CcEEEEEeC--
Confidence 1 2457788999765 2 32 3788886 699999999999 776653110
Q ss_pred CCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEE
Q 043533 240 NAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEV 299 (301)
Q Consensus 240 ~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a 299 (301)
...+++.|.++||++.++...+.-..++.+
T Consensus 215 ------------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a 244 (257)
T 2qy6_A 215 ------------------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCG 244 (257)
T ss_dssp ------------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred ------------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence 012467788889987766544444444444
No 268
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.00 E-value=3.6e-06 Score=73.02 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=52.6
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCc
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLR-FIPP 207 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~-~~p~ 207 (301)
+..++ +.++ .....+|||||||+|.++. +. +.+..+++++|+ +.+++.+++ .++++++.+|+.+ ++++
T Consensus 10 ~~~iv-~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 10 IDSIV-SAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHH-HHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHH
T ss_pred HHHHH-HhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHH
Confidence 45566 6665 5667899999999999999 64 555445999999 888887765 2589999999987 5543
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.97 E-value=5.5e-06 Score=82.12 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=70.4
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH------------------------------------------CC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA------------------------------------------FP 172 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~------------------------------------------~P 172 (301)
+..++ .... +.+...|||.+||+|.++++.+.. .|
T Consensus 179 Aa~ll-~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 179 AAAIV-MRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHH-HHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-HhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 34455 5555 566789999999999999998864 23
Q ss_pred CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC----cchhHHH---------------HHHH---HHHH
Q 043533 173 GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMLR-FIP----PANAFLF---------------KILK---KRRE 221 (301)
Q Consensus 173 ~~~~~~~Dl-p~~~~~a~~-------~~ri~~~~~D~~~-~~p----~~D~i~~---------------~iL~---~~~~ 221 (301)
+.+++++|+ |.+++.|+. .++|+|..+|+.+ ..| .+|+|++ .+.+ ++.+
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 468999999 999988875 4569999999976 223 3788887 2333 3444
Q ss_pred hcccCCCCcEEEEEee
Q 043533 222 AIASNGERGKVIIIDI 237 (301)
Q Consensus 222 aL~p~~~gg~l~i~e~ 237 (301)
.+.| ||+++|+..
T Consensus 336 ~~~~---g~~~~ilt~ 348 (703)
T 3v97_A 336 NQFG---GWNLSLFSA 348 (703)
T ss_dssp HHCT---TCEEEEEES
T ss_pred hhCC---CCeEEEEeC
Confidence 4457 899988753
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.96 E-value=2.8e-06 Score=82.79 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=75.0
Q ss_pred hhHHhhcCchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH----C---------CCCe
Q 043533 109 FWEFMNQNPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA----F---------PGIK 175 (301)
Q Consensus 109 ~~e~~~~~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~---------P~~~ 175 (301)
.||-+.+|+-.-..|.+|+... +. +.++ .-.+...|+|||||+|.++...+++ . ...+
T Consensus 378 tYe~fekD~vRy~~Y~~AI~~a-------l~-d~~~-~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k 448 (745)
T 3ua3_A 378 VYNTFEQDQIKYDVYGEAVVGA-------LK-DLGA-DGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK 448 (745)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHH-------HH-HHHT-TCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE
T ss_pred HHHHHcCChhhHHHHHHHHHHH-------HH-Hhhc-ccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE
Confidence 4777777777777777776431 22 2221 0123468999999999997543222 2 2458
Q ss_pred EEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC------Cc-chhHHH-------------HHHHHHHHhcccCC
Q 043533 176 CTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI------PP-ANAFLF-------------KILKKRREAIASNG 227 (301)
Q Consensus 176 ~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~------p~-~D~i~~-------------~iL~~~~~aL~p~~ 227 (301)
++++|. |.++...+. .++|+++.+|+.+ .. |+ +|+|++ .+|..+.+.|+|
T Consensus 449 VyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp-- 526 (745)
T 3ua3_A 449 LYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP-- 526 (745)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT--
T ss_pred EEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC--
Confidence 999998 443322221 6889999999988 56 55 999886 677778888999
Q ss_pred CCcEE
Q 043533 228 ERGKV 232 (301)
Q Consensus 228 ~gg~l 232 (301)
||.+
T Consensus 527 -~Gi~ 530 (745)
T 3ua3_A 527 -TTIS 530 (745)
T ss_dssp -TCEE
T ss_pred -CcEE
Confidence 7743
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.96 E-value=2.6e-06 Score=78.50 Aligned_cols=86 Identities=7% Similarity=-0.084 Sum_probs=68.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-------CCC-eEEEeCCCCC--C--CCc-chhHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPG-IKCTVLDL-PHAVANLPE-------ADN-LKYIAGDMLR--F--IPP-ANAFL 212 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~-~~~~~~Dl-p~~~~~a~~-------~~r-i~~~~~D~~~--~--~p~-~D~i~ 212 (301)
.+..+|||++||+|.+++.++++.++ .+++.+|+ +..++.+++ .++ ++++.+|.++ . .+. ||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 34679999999999999999998765 57999999 888877764 345 9999999865 2 233 99998
Q ss_pred H-------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 213 F-------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 213 ~-------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
+ .++..+.+.|+| ||.|++.-
T Consensus 131 lDP~g~~~~~l~~a~~~Lk~---gGll~~t~ 158 (392)
T 3axs_A 131 LDPFGTPVPFIESVALSMKR---GGILSLTA 158 (392)
T ss_dssp ECCSSCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECCCcCHHHHHHHHHHHhCC---CCEEEEEe
Confidence 8 799999999999 77555443
No 272
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.90 E-value=1.5e-05 Score=71.28 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=54.4
Q ss_pred hhhhhcccCCCeEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC-----C
Q 043533 141 SECKQIFEGLGSLVDVGGGNVSFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMLR-FI-----P 206 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~------~~ri~~~~~D~~~-~~-----p 206 (301)
..++ .....+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ .++|+++.+|+.+ +. .
T Consensus 96 ~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 96 MLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp HHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGT
T ss_pred HHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccC
Confidence 4444 5667899999999999999999874 5689999999 777776654 3579999999865 21 1
Q ss_pred cchhHHH
Q 043533 207 PANAFLF 213 (301)
Q Consensus 207 ~~D~i~~ 213 (301)
.||.|++
T Consensus 174 ~fD~Vl~ 180 (309)
T 2b9e_A 174 EVHYILL 180 (309)
T ss_dssp TEEEEEE
T ss_pred CCCEEEE
Confidence 2677664
No 273
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.87 E-value=7.6e-05 Score=68.25 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=27.7
Q ss_pred CCeEEEecCCccHHHHHH--------HHHC-------CCCeEEEeechH
Q 043533 150 LGSLVDVGGGNVSFSRII--------SEAF-------PGIKCTVLDLPH 183 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l--------~~~~-------P~~~~~~~Dlp~ 183 (301)
.-+|+|+|||+|..+..+ .+++ |++++..-|+|.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ 101 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPS 101 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTT
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCc
Confidence 468999999999988876 3343 889999999953
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.77 E-value=2.8e-06 Score=73.97 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=45.7
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-h-------HHHhcCCC-------CCCeEEEeCCCCC
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-P-------HAVANLPE-------ADNLKYIAGDMLR 203 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p-------~~~~~a~~-------~~ri~~~~~D~~~ 203 (301)
.....+|||+|||+|..+..+++. ..+++++|+ | ++++.++. .+||+++.+|+.+
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 455689999999999999999986 568999999 7 77777653 3579999999864
No 275
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.68 E-value=0.00011 Score=67.29 Aligned_cols=33 Identities=18% Similarity=0.029 Sum_probs=28.3
Q ss_pred CCeEEEecCCccHHHHHHHHH-----------------CCCCeEEEeech
Q 043533 150 LGSLVDVGGGNVSFSRIISEA-----------------FPGIKCTVLDLP 182 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~-----------------~P~~~~~~~Dlp 182 (301)
.-+|+|+||++|..+..+... .|+++++.-|+|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 568999999999999887776 578899999997
No 276
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.66 E-value=6.2e-05 Score=67.34 Aligned_cols=66 Identities=20% Similarity=0.144 Sum_probs=55.5
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMLR 203 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~~ 203 (301)
..+++ +.+. ......+||..+|.|..+..|+++ .|+.+++++|. |++++.++. .+|++++.++|.+
T Consensus 46 l~Evl-~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 46 LDEAV-NGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp THHHH-HHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred HHHHH-HhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 46677 7776 666789999999999999999988 58899999999 888887643 5789999998754
No 277
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.65 E-value=1.4e-05 Score=72.85 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=61.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEeCCCCCCC-------C
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--------------ADNLKYIAGDMLRFI-------P 206 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--------------~~ri~~~~~D~~~~~-------p 206 (301)
++++||-||||.|..+.++++. |.-+++++|+ |.|++.+++ .+|++++.+|.++-+ .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3689999999999999999975 5578999999 888886653 356888888875311 1
Q ss_pred cchhHHH---------------------HHHHHHHHhcccCCCCcEEE
Q 043533 207 PANAFLF---------------------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 207 ~~D~i~~---------------------~iL~~~~~aL~p~~~gg~l~ 233 (301)
.||+|++ .+++.++++|+| ||.++
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p---~GVlv 328 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYF 328 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC---CCEEE
Confidence 2666653 778999999999 66443
No 278
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.65 E-value=5.5e-05 Score=59.45 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=47.7
Q ss_pred hhhhhcccCCCeEEEecCCcc-HHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC----cchhHHH
Q 043533 141 SECKQIFEGLGSLVDVGGGNV-SFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIP----PANAFLF 213 (301)
Q Consensus 141 ~~~~~~~~~~~~vlDvGgG~G-~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p----~~D~i~~ 213 (301)
+.+..+.....+|||||||.| ..+..|++. -+..++++|+ |..++ ++..|+|+|.. .||+|..
T Consensus 27 eYI~~~~~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 27 VYIIRCSGPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp HHHHHHSCSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEE
T ss_pred HHHHhcCCCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEE
Confidence 444433455679999999999 588888874 3688999998 66554 88899999755 4898855
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.64 E-value=5.7e-05 Score=65.66 Aligned_cols=89 Identities=11% Similarity=0.121 Sum_probs=56.5
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHh-cCCC----CCCeEEEeCCCCC-CCCc--chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVA-NLPE----ADNLKYIAGDMLR-FIPP--ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~-~a~~----~~ri~~~~~D~~~-~~p~--~D~i~~----- 213 (301)
+....+|||||||+|.++..++++.+-.++.++|+..-+. .... ..++.+...++.. .++. +|+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 5666799999999999999988876655666666631111 1111 1133334444321 3332 676665
Q ss_pred ------------HHHHHHHHhcccCCCC-cEEEEEeeee
Q 043533 214 ------------KILKKRREAIASNGER-GKVIIIDIVI 239 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~g-g~l~i~e~~~ 239 (301)
.+|+.+.+.|+| | |.+++ ..+-
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~Lkp---G~G~FV~-KVf~ 186 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLAC---GVDNFCV-KVLA 186 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE-EESC
T ss_pred cCchHHHHHHHHHHHHHHHHHhCC---CCCeEEE-EecC
Confidence 578899999999 8 76666 5544
No 280
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.62 E-value=0.00011 Score=66.15 Aligned_cols=130 Identities=14% Similarity=0.090 Sum_probs=87.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC---------------------------CCCeEEEeCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE---------------------------ADNLKYIAGD 200 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~---------------------------~~ri~~~~~D 200 (301)
.+...||.+|||.......|...+|+++++=+|+|++++.-++ .++..++++|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3567999999999999999999989999999999998764321 2789999999
Q ss_pred CCC-CC----------Cc-chhH-----HH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhh
Q 043533 201 MLR-FI----------PP-ANAF-----LF--------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLF 255 (301)
Q Consensus 201 ~~~-~~----------p~-~D~i-----~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~ 255 (301)
+.+ +. +. ..++ ++ ++|+.+.+.. | +|.++++|.+.+.....+ +.. ....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~---~~~~v~~e~i~~~~~~~~-fg~-~m~~ 249 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S---HGLWISYDPIGGSQPNDR-FGA-IMQS 249 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S---SEEEEEEEECCCCSTTCC-HHH-HHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C---CcEEEEEeccCCCCCcch-HHH-HHHH
Confidence 986 22 11 1222 22 8888888876 5 688889999877322211 111 0000
Q ss_pred chhh---ccccC-CccCCHHHHHHHHHhCCCc
Q 043533 256 DIVM---SVNAT-GKERTESEWAKLFFDAVFS 283 (301)
Q Consensus 256 d~~~---~~~~~-g~~rt~~e~~~ll~~aGf~ 283 (301)
.+.- ....+ ....+.++..+.|.++||+
T Consensus 250 ~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 250 NLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 0100 00111 1346889999999999997
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.61 E-value=5.7e-05 Score=68.60 Aligned_cols=77 Identities=9% Similarity=0.072 Sum_probs=59.8
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCC-CCCc--chhHHH-------HHH
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLR-FIPP--ANAFLF-------KIL 216 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~-~~p~--~D~i~~-------~iL 216 (301)
+..+.++||+|+++|.++..++++ +.+++++|..++-......++|+++.+|.+. ..+. +|+|++ +++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p~~~~ 286 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVA 286 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSCHHHHH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCChHHhH
Confidence 456789999999999999999988 5799999985444444446899999999998 3332 898887 566
Q ss_pred HHHHHhccc
Q 043533 217 KKRREAIAS 225 (301)
Q Consensus 217 ~~~~~aL~p 225 (301)
.-+.+.+..
T Consensus 287 ~l~~~wl~~ 295 (375)
T 4auk_A 287 ALMAQWLVN 295 (375)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 666666655
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.60 E-value=1.1e-05 Score=70.18 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=53.1
Q ss_pred HHHHHhhhhhcccCC--CeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHH-------HhcCCC-----C---CCeEEE
Q 043533 136 SFVVKSECKQIFEGL--GSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHA-------VANLPE-----A---DNLKYI 197 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~--~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~-------~~~a~~-----~---~ri~~~ 197 (301)
+.+. +.+. ..+. .+|||+|||+|..+..++++ +.+++++|. |.+ ++.++. . +|++++
T Consensus 76 e~l~-~al~--l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 76 EAVA-KAVG--IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp SHHH-HHTT--CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHH-HHhc--ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 4455 5555 5555 79999999999999999998 568999999 644 332221 1 579999
Q ss_pred eCCCCC---CCCc-chhHHH
Q 043533 198 AGDMLR---FIPP-ANAFLF 213 (301)
Q Consensus 198 ~~D~~~---~~p~-~D~i~~ 213 (301)
.+|..+ .++. ||+|++
T Consensus 151 ~~D~~~~L~~~~~~fDvV~l 170 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYL 170 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEE
T ss_pred ECCHHHHHHhCcccCCEEEE
Confidence 999865 2343 888777
No 283
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.56 E-value=2.3e-05 Score=75.30 Aligned_cols=96 Identities=14% Similarity=0.067 Sum_probs=69.9
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCC------------------CCeEEEeec-hHHHhcCCC------
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFP------------------GIKCTVLDL-PHAVANLPE------ 190 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P------------------~~~~~~~Dl-p~~~~~a~~------ 190 (301)
..++ +.++ .....+|+|.|||+|.++..+.+... ..++.++|+ +.++..|+.
T Consensus 159 ~~mv-~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g 235 (541)
T 2ar0_A 159 KTII-HLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD 235 (541)
T ss_dssp HHHH-HHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHH-HHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC
Confidence 4445 5444 34567999999999999998886521 247999999 777776652
Q ss_pred CC-----CeEEEeCCCCC-C-C--CcchhHHH-------------------------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 191 AD-----NLKYIAGDMLR-F-I--PPANAFLF-------------------------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 191 ~~-----ri~~~~~D~~~-~-~--p~~D~i~~-------------------------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
.+ ++.+..+|.+. + . +.||+|++ ..++++.+.|+| ||++.++-
T Consensus 236 i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~a~V~ 312 (541)
T 2ar0_A 236 IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP---GGRAAVVV 312 (541)
T ss_dssp CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC---CCEEEEEe
Confidence 12 27888999886 3 2 23888776 378999999999 89888775
Q ss_pred e
Q 043533 237 I 237 (301)
Q Consensus 237 ~ 237 (301)
+
T Consensus 313 p 313 (541)
T 2ar0_A 313 P 313 (541)
T ss_dssp E
T ss_pred c
Confidence 3
No 284
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.42 E-value=0.00041 Score=62.99 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=78.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHH----------------CCCCeEEEeechH-----HHhcCCC---CCCeE---EEeCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEA----------------FPGIKCTVLDLPH-----AVANLPE---ADNLK---YIAGD 200 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~----------------~P~~~~~~~Dlp~-----~~~~a~~---~~ri~---~~~~D 200 (301)
++.-+|+|+||++|..+..+... .|++++..-|+|. +-..... ..+-. -++|.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34468999999999766543332 5778899999953 3322221 11323 34456
Q ss_pred CCC-CCCc--chhHHH--------------------------------------------HHHHHHHHhcccCCCCcEEE
Q 043533 201 MLR-FIPP--ANAFLF--------------------------------------------KILKKRREAIASNGERGKVI 233 (301)
Q Consensus 201 ~~~-~~p~--~D~i~~--------------------------------------------~iL~~~~~aL~p~~~gg~l~ 233 (301)
|.. .+|. +|++++ .+|+..++.|+| ||+++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p---GG~mv 206 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP---GGRMV 206 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT---TCEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEE
Confidence 655 4554 555543 459999999999 88887
Q ss_pred EEeeeeCCCcc-c----hhhhh-hhhhhchhhcc----------ccCCccCCHHHHHHHHHhCCC-ceeEEE
Q 043533 234 IIDIVINAEEE-E----HELTE-TKFLFDIVMSV----------NATGKERTESEWAKLFFDAVF-SHYKIT 288 (301)
Q Consensus 234 i~e~~~~~~~~-~----~~~~~-~~~~~d~~~~~----------~~~g~~rt~~e~~~ll~~aGf-~~~~~~ 288 (301)
+.-...++... . .-+.. ...+.|+..-- ..--..++.+|+++++++.|. ++....
T Consensus 207 l~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 207 LTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred EEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 76654443211 0 00100 01122221100 011235789999999999965 666543
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.41 E-value=8.4e-05 Score=64.69 Aligned_cols=88 Identities=15% Similarity=0.205 Sum_probs=56.3
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeech-HHHhcCCC----CCC-eEEEeC-CCCCCCC-c-chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLP-HAVANLPE----ADN-LKYIAG-DMLRFIP-P-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp-~~~~~a~~----~~r-i~~~~~-D~~~~~p-~-~D~i~~---- 213 (301)
+....+|||||||+|.++...+++.+-..++++|+. .....+.. ..+ +.+... |+. .++ . +|+|++
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~-~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVF-NMEVIPGDTLLCDIGE 166 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGG-GSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchh-hcCCCCcCEEEecCcc
Confidence 566779999999999999999988777778888882 22111111 222 223322 332 222 2 666665
Q ss_pred -------------HHHHHHHHhcccCCCC--cEEEEEeeee
Q 043533 214 -------------KILKKRREAIASNGER--GKVIIIDIVI 239 (301)
Q Consensus 214 -------------~iL~~~~~aL~p~~~g--g~l~i~e~~~ 239 (301)
.+|.-+.+.|+| | |.+++ -.+-
T Consensus 167 nsG~~~~D~~rs~~LL~~A~~~Lk~---g~~G~Fv~-KvF~ 203 (282)
T 3gcz_A 167 SSPSIAVEEQRTLRVLNCAKQWLQE---GNYTEFCI-KVLC 203 (282)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHH---HCCCEEEE-EESC
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCC---CCCCcEEE-EEec
Confidence 678888899999 6 76555 4433
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.31 E-value=0.00033 Score=58.40 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=63.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------CCCeEEEeCCCCCC------------
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE---------ADNLKYIAGDMLRF------------ 204 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---------~~ri~~~~~D~~~~------------ 204 (301)
..+.++||++|+| .-++.+++ .++.+++.+|. ++..+.+++ .++|+++.||..+-
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 5667899999984 55555555 46889999998 666665543 45899999995431
Q ss_pred ------------CC--c-chhHHH------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccc
Q 043533 205 ------------IP--P-ANAFLF------KILKKRREAIASNGERGKVIIIDIVINAEEEE 245 (301)
Q Consensus 205 ------------~p--~-~D~i~~------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~ 245 (301)
.+ . ||+|++ ..+..+.+.|+| || ++|+|.+.......
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~---GG-~Iv~DNv~~r~~y~ 162 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITR---PV-TLLFDDYSQRRWQH 162 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSS---CE-EEEETTGGGCSSGG
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCC---Ce-EEEEeCCcCCcchH
Confidence 22 3 899998 566667788999 55 55777655444433
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.29 E-value=0.00032 Score=61.28 Aligned_cols=63 Identities=25% Similarity=0.229 Sum_probs=52.6
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCC
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDML 202 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~--~~ri~~~~~D~~ 202 (301)
.+.++ +.+. ......+||.+||.|..+..|+++ +.+++++|. |.+++.+++ .+|++++.+||.
T Consensus 11 l~e~l-e~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEAL-DLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFR 76 (285)
T ss_dssp HHHHH-HHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGG
T ss_pred HHHHH-HhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcc
Confidence 46677 7776 667789999999999999999998 789999999 888765542 369999999985
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.28 E-value=0.00025 Score=70.35 Aligned_cols=86 Identities=12% Similarity=0.052 Sum_probs=60.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC---CCeEEEeec-hHHHhcC--CC----------CCCeEEEeCCCCCC--CC--cc
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFP---GIKCTVLDL-PHAVANL--PE----------ADNLKYIAGDMLRF--IP--PA 208 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P---~~~~~~~Dl-p~~~~~a--~~----------~~ri~~~~~D~~~~--~p--~~ 208 (301)
...+|+|.|||+|.++..++++.+ ..++.++|+ +.+++.| +. .+...+...|++.+ .+ .|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999999876 357999999 7666655 10 12234555566542 11 26
Q ss_pred hhHHH----------------------------------------HHHHHHHHhcccCCCCcEEEEEee
Q 043533 209 NAFLF----------------------------------------KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 209 D~i~~----------------------------------------~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
|+|++ .+++++.+.|+| ||++.++-+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp---GGrLAfIlP 466 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD---GTVISAIMP 466 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT---TCEEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 66655 256778889999 898877654
No 289
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.23 E-value=5.7e-05 Score=64.81 Aligned_cols=84 Identities=17% Similarity=0.174 Sum_probs=54.2
Q ss_pred ccCCCeEEEecCCccHHHHHHHHH--CCC--CeEEEeechHHHhcCCCCCCe---EEEeC-CCCCCCCc-chhHHH----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEA--FPG--IKCTVLDLPHAVANLPEADNL---KYIAG-DMLRFIPP-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~--~P~--~~~~~~Dlp~~~~~a~~~~ri---~~~~~-D~~~~~p~-~D~i~~---- 213 (301)
+....+|||+||+.|.++.-.+++ -.. -.++++|+ +..+......++ .|..+ |+++.-+. +|+|++
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDMAP 149 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDIGE 149 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCCCC
Confidence 667789999999999999999886 211 12344443 111111112454 55557 99873343 888887
Q ss_pred -------------HHHHHHHHhcccCCCCc-EEEE
Q 043533 214 -------------KILKKRREAIASNGERG-KVII 234 (301)
Q Consensus 214 -------------~iL~~~~~aL~p~~~gg-~l~i 234 (301)
.+|.-+.+.|+| || .+++
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~---gG~~Fvv 181 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSR---GPKEFCI 181 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhc---CCcEEEE
Confidence 456667789999 77 5555
No 290
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.23 E-value=0.00019 Score=68.90 Aligned_cols=86 Identities=15% Similarity=0.008 Sum_probs=66.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCC--------CCCeEEEeCCCCC-CCC----c-chh
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAF---PGIKCTVLDL-PHAVANLPE--------ADNLKYIAGDMLR-FIP----P-ANA 210 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~---P~~~~~~~Dl-p~~~~~a~~--------~~ri~~~~~D~~~-~~p----~-~D~ 210 (301)
...+|+|.+||+|.++..+++.. +..++.++|+ +.+...|+. .+++.+..+|.+. ++| . ||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999999999884 4678999999 777766653 2567899999886 322 2 787
Q ss_pred HHH----------------------------------HHHHHHHHhcc-cCCCCcEEEEEee
Q 043533 211 FLF----------------------------------KILKKRREAIA-SNGERGKVIIIDI 237 (301)
Q Consensus 211 i~~----------------------------------~iL~~~~~aL~-p~~~gg~l~i~e~ 237 (301)
|++ ..++++.+.|+ | ||++.++-+
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~---gGr~a~VlP 359 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD---NGVMAIVLP 359 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT---TCEEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC---ceeEEEEec
Confidence 775 26888999999 8 898876643
No 291
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.08 E-value=8.8e-05 Score=71.27 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=64.0
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCC---------------CCeEEEeec-hHHHhcCCC-------C
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFP---------------GIKCTVLDL-PHAVANLPE-------A 191 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P---------------~~~~~~~Dl-p~~~~~a~~-------~ 191 (301)
+..++ +.+. . ...+|+|.+||+|.++..+++..+ ..++.++|+ +.++..|+. .
T Consensus 234 v~lmv-~ll~--p-~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 234 VTLIV-EMLE--P-YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp HHHHH-HHHC--C-CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHH-HHHh--c-CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 34444 4444 2 234999999999999988765432 468999999 777766652 2
Q ss_pred CCeEEEeCCCCC-C-CCc--chhHHH----------------------------------------HHHHHHHHhcccCC
Q 043533 192 DNLKYIAGDMLR-F-IPP--ANAFLF----------------------------------------KILKKRREAIASNG 227 (301)
Q Consensus 192 ~ri~~~~~D~~~-~-~p~--~D~i~~----------------------------------------~iL~~~~~aL~p~~ 227 (301)
.++.+..+|.+. + .+. ||+|++ ..++++.+.|+|
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~-- 387 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP-- 387 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE--
T ss_pred cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc--
Confidence 334446777765 3 222 676665 257888899999
Q ss_pred CCcEEEEEe
Q 043533 228 ERGKVIIID 236 (301)
Q Consensus 228 ~gg~l~i~e 236 (301)
||++.++-
T Consensus 388 -gGr~aiVl 395 (544)
T 3khk_A 388 -TGSMALLL 395 (544)
T ss_dssp -EEEEEEEE
T ss_pred -CceEEEEe
Confidence 88877664
No 292
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.02 E-value=0.00069 Score=57.39 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=65.8
Q ss_pred HHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhc---CCC---CCCeEEEeC-CCCCCCCc-c
Q 043533 137 FVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVAN---LPE---ADNLKYIAG-DMLRFIPP-A 208 (301)
Q Consensus 137 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~---a~~---~~ri~~~~~-D~~~~~p~-~ 208 (301)
++. +.+. +....+||||||++|.++.-.+....-.++.++|+-..-.. ..+ -+.|+|..+ |++.--|. +
T Consensus 69 ei~-ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~ 145 (267)
T 3p8z_A 69 WFV-ERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKC 145 (267)
T ss_dssp HHH-HTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCC
T ss_pred HHH-HhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccc
Confidence 344 4443 56667999999999999998887766568999999322211 111 477999999 97652223 8
Q ss_pred hhHHH-----------------HHHHHHHHhcccCCCCcEEEEEeeeeCC
Q 043533 209 NAFLF-----------------KILKKRREAIASNGERGKVIIIDIVINA 241 (301)
Q Consensus 209 D~i~~-----------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~ 241 (301)
|.+++ ++|.-+.+.|++ |.++| -.+-|.
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~----~~fc~-KVl~py 190 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN----NQFCI-KVLNPY 190 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS----CEEEE-EESCCC
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc----CCEEE-EEccCC
Confidence 88887 566666788887 45555 444343
No 293
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.99 E-value=0.00029 Score=65.08 Aligned_cols=64 Identities=11% Similarity=0.136 Sum_probs=51.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C----CCeEEEeCCCCCC---CC--cchhHHH
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----A----DNLKYIAGDMLRF---IP--PANAFLF 213 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~----~ri~~~~~D~~~~---~p--~~D~i~~ 213 (301)
....+|||+|||+|..+..+++. ..+++++|+ +.+++.|+. . ++++++.+|+++. .+ .||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 33689999999999999999887 469999999 888887764 1 5799999999863 22 3888887
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.96 E-value=0.00063 Score=59.60 Aligned_cols=85 Identities=12% Similarity=0.152 Sum_probs=52.9
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechH-HHhcCC--C--C-CCeEEEeC-CCCCCCCc-chhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPH-AVANLP--E--A-DNLKYIAG-DMLRFIPP-ANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~-~~~~a~--~--~-~ri~~~~~-D~~~~~p~-~D~i~~----- 213 (301)
+.+..+||||||++|.++..++++.+-..++++|+.. ...... . . +-+.+..+ |++.-.+. +|+|++
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 5667899999999999999999877666788888831 111100 0 1 11223222 33221111 444443
Q ss_pred ------------HHHHHHHHhcccCCCC-cEEEE
Q 043533 214 ------------KILKKRREAIASNGER-GKVII 234 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~g-g~l~i 234 (301)
.+|.-+.+.|+| | |.+++
T Consensus 159 sG~~~~D~~rs~~LL~~A~~~Lkp---G~G~FV~ 189 (300)
T 3eld_A 159 SSNPLVERDRTMKVLENFERWKHV---NTENFCV 189 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCT---TCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcC---CCCcEEE
Confidence 678888999999 8 76665
No 295
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.91 E-value=0.011 Score=53.10 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=89.2
Q ss_pred CCCeEEEecCCccHHHHHHHHH-CCCCeEEEeechHHHhcCC-----------------------------CCCCeEEEe
Q 043533 149 GLGSLVDVGGGNVSFSRIISEA-FPGIKCTVLDLPHAVANLP-----------------------------EADNLKYIA 198 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~-~P~~~~~~~Dlp~~~~~a~-----------------------------~~~ri~~~~ 198 (301)
+...||-+|||.=....+|... .++++++=+|+|++++.=+ ..++..+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4679999999999999999876 3688899999999876211 147889999
Q ss_pred CCCCCC--C-------------Cc---chhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhh
Q 043533 199 GDMLRF--I-------------PP---ANAFLF--------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETK 252 (301)
Q Consensus 199 ~D~~~~--~-------------p~---~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~ 252 (301)
.|+.+. + |. +..+++ ++|+.+.+..++ |.++++|.+.+.+..+..+....
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~----~~~i~yE~i~p~d~fg~~M~~~l 245 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER----AMFINYEQVNMGDRFGQIMIENL 245 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS----EEEEEEEECCTTSHHHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC----ceEEEEeccCCCCHHHHHHHHHH
Confidence 998751 1 11 122222 888888887665 78888999866543221110000
Q ss_pred hhhchhhccccCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 253 FLFDIVMSVNATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 253 ~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
......+... ....+.++..++|.++||+.+++..+
T Consensus 246 ~~~g~pl~sl--~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 246 RRRQCDLAGV--ETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HTTTCCCTTG--GGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHhCCCCccc--ccCCCHHHHHHHHHHcCCCcceeecH
Confidence 0011111100 12357888999999999999887665
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.72 E-value=0.0015 Score=57.39 Aligned_cols=87 Identities=15% Similarity=0.215 Sum_probs=62.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEeec----hH-----------------------HHhcCCC-----
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAF-----PGIKCTVLDL----PH-----------------------AVANLPE----- 190 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~-----P~~~~~~~Dl----p~-----------------------~~~~a~~----- 190 (301)
..++.||++|+..|..++.+++.. |+.+++++|. |+ .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346899999999999988887653 5788999994 11 0111211
Q ss_pred ---CCCeEEEeCCCCCC---CC-c-chhHHH---------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 191 ---ADNLKYIAGDMLRF---IP-P-ANAFLF---------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 191 ---~~ri~~~~~D~~~~---~p-~-~D~i~~---------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
.++|+++.||+.+. .+ . +|++++ ..|..++..|+| |.++|+|..
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~p----GGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSV----GGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEE----EEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCC----CEEEEEcCC
Confidence 38999999998762 33 2 677666 789999999999 557777764
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.65 E-value=0.0018 Score=56.61 Aligned_cols=90 Identities=11% Similarity=0.172 Sum_probs=60.0
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeechHH--H-hcCCC---CCCeEEEeC-CCCC-CCCcchhHHH-----
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHA--V-ANLPE---ADNLKYIAG-DMLR-FIPPANAFLF----- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~--~-~~a~~---~~ri~~~~~-D~~~-~~p~~D~i~~----- 213 (301)
+.....||||||++|.++.-.+....-.++.++|+-.. . +...+ -+-|.|+.+ |++. +...+|++++
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDigeS 171 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIGES 171 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEECccC
Confidence 55667999999999999997777765557999999322 1 11111 234788888 8765 2222777776
Q ss_pred ------------HHHHHHHHhcccCCCC-cEEEEEeeeeC
Q 043533 214 ------------KILKKRREAIASNGER-GKVIIIDIVIN 240 (301)
Q Consensus 214 ------------~iL~~~~~aL~p~~~g-g~l~i~e~~~~ 240 (301)
++|.-+-+.|++ | |.++| -.+-|
T Consensus 172 s~~~~ve~~Rtl~vLel~~~wL~~---~~~~f~~-KVl~p 207 (321)
T 3lkz_A 172 SSSAEVEEHRTIRVLEMVEDWLHR---GPREFCV-KVLCP 207 (321)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTT---CCCEEEE-EESCT
T ss_pred CCChhhhhhHHHHHHHHHHHHhcc---CCCcEEE-EEcCC
Confidence 677777788988 5 55555 44333
No 298
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.58 E-value=0.0015 Score=59.24 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=66.6
Q ss_pred ccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEeCCCCC-C--CCc-ch
Q 043533 147 FEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP------------EADNLKYIAGDMLR-F--IPP-AN 209 (301)
Q Consensus 147 ~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~------------~~~ri~~~~~D~~~-~--~p~-~D 209 (301)
...+.+|||+.+|.|.=+..|+...++.+++.+|. +.-+...+ ...++.+...|... + .+. ||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 56678999999999999999999887778999998 44333221 13578888888754 1 233 66
Q ss_pred hHHH-----------------------------------HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 210 AFLF-----------------------------------KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 210 ~i~~-----------------------------------~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
.|++ +||+++.+.|+| ||+|+.....+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp---GG~LVYsTCSl~ 288 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP---GGHVVYSTCSLS 288 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE---EEEEEEEESCCC
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEEeCCCc
Confidence 6654 899999999999 776665554333
No 299
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.43 E-value=0.0085 Score=53.27 Aligned_cols=130 Identities=14% Similarity=0.120 Sum_probs=81.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEeechHHHhcCCC---------CCCeEEEeCCCCCCC------------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFP-GIKCTVLDLPHAVANLPE---------ADNLKYIAGDMLRFI------------ 205 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P-~~~~~~~Dlp~~~~~a~~---------~~ri~~~~~D~~~~~------------ 205 (301)
.+...||+||||.=..+..+. .| +++++-+|.|++++..++ .++..++.+|+.+.+
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 456789999999999877776 35 588999999998875542 567899999987521
Q ss_pred -Cc---chhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhh-c-hhhcc-----c-cCC
Q 043533 206 -PP---ANAFLF--------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLF-D-IVMSV-----N-ATG 265 (301)
Q Consensus 206 -p~---~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~-d-~~~~~-----~-~~g 265 (301)
|. .-.+++ .+|+.+.+.+.| |..+++|.+.++..... ....... . +.-.. . .+-
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~----gs~l~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~l~~~ 252 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAV----GSRIAVETSPLHGDEWR--EQMQLRFRRVSDALGFEQAVDVQEL 252 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCT----TCEEEEECCCTTCSHHH--HHHHHHHHHHHC-----------CC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCC----CeEEEEEecCCCCcchh--HHHHHHHHHHHHHcCCcCCCCcccc
Confidence 11 111221 899999998888 45677787665432110 0000000 0 00000 0 011
Q ss_pred cc-CC-HHHHHHHHHhCCCcee
Q 043533 266 KE-RT-ESEWAKLFFDAVFSHY 285 (301)
Q Consensus 266 ~~-rt-~~e~~~ll~~aGf~~~ 285 (301)
.. ++ .++..++|.+.||+.+
T Consensus 253 ~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 253 IYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCTTCCCHHHHHTTTTEEEE
T ss_pred ccCCCChHHHHHHHHHCcCccc
Confidence 12 25 7889999999999988
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.16 E-value=0.0058 Score=55.27 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=48.3
Q ss_pred hHHHHHhhhhhccc------CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC---CCCCeEEEeCCCCC
Q 043533 135 TSFVVKSECKQIFE------GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP---EADNLKYIAGDMLR 203 (301)
Q Consensus 135 ~~~~~~~~~~~~~~------~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~---~~~ri~~~~~D~~~ 203 (301)
++.++ +..+ .. +...|||||.|.|.++..|+++...-+++++++ +..++..+ ..+|++++.+|+++
T Consensus 41 ~~~Iv-~~~~--l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 41 YNKIF-DKLD--LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp HHHHH-HHHC--GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred HHHHH-Hhcc--CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 45566 5554 33 247899999999999999998754457999988 44444332 25799999999964
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.11 E-value=0.0035 Score=54.78 Aligned_cols=79 Identities=11% Similarity=0.117 Sum_probs=55.0
Q ss_pred ccCCCeEEEecC------CccHHHHHHHHHCCC-CeEEEeechHHHhcCCCCCCeEEEeCCCCC-CCCc-chhHHH----
Q 043533 147 FEGLGSLVDVGG------GNVSFSRIISEAFPG-IKCTVLDLPHAVANLPEADNLKYIAGDMLR-FIPP-ANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGg------G~G~~~~~l~~~~P~-~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~-~~p~-~D~i~~---- 213 (301)
.+...+|||+|+ -.|. ..+.+..|+ ..++.+|+.++...+. .++.||+.+ .... +|+|++
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda~-----~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDAD-----STLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSS-----EEEESCGGGEEESSCEEEEEECCCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCCC-----eEEEccccccccCCCCCEEEecCCC
Confidence 456789999995 6777 355566886 6999999966553322 447788654 2222 677665
Q ss_pred ------------------HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 ------------------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ------------------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.+|.=+.+.|+| ||.+++=
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp---GGsFvVK 216 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVK 216 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcC---CCEEEEE
Confidence 667778899999 7877664
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.99 E-value=0.0093 Score=52.73 Aligned_cols=116 Identities=18% Similarity=0.166 Sum_probs=65.2
Q ss_pred CCeEEEecCCccHHHHHH----HHHCCCCe--EEEeechHH--H---------------hcCCC--CCCe--EEEeCCCC
Q 043533 150 LGSLVDVGGGNVSFSRII----SEAFPGIK--CTVLDLPHA--V---------------ANLPE--ADNL--KYIAGDML 202 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l----~~~~P~~~--~~~~Dlp~~--~---------------~~a~~--~~ri--~~~~~D~~ 202 (301)
.-+|+|+|=|+|...... .+..|+.+ ++.+|...+ . ..... ..+| ++.-||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 357999999999865433 34578765 455553100 0 00000 2343 45567765
Q ss_pred CC---CCc--chhHHH--------------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhcccc
Q 043533 203 RF---IPP--ANAFLF--------------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNA 263 (301)
Q Consensus 203 ~~---~p~--~D~i~~--------------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 263 (301)
+. ++. +|++++ .+|+++++.++| ||++.-.
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~p---gg~laTY---------------------------- 225 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDE---KGYWVSY---------------------------- 225 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEE---EEEEEES----------------------------
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCC---CcEEEEE----------------------------
Confidence 42 222 566665 777777777777 5543211
Q ss_pred CCccCCHHHHHHHHHhCCCceeEEEecCCceeEEEEe
Q 043533 264 TGKERTESEWAKLFFDAVFSHYKITPIFGMKSLIEVY 300 (301)
Q Consensus 264 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i~a~ 300 (301)
-.....++-|.+|||++.++...++-...+.|.
T Consensus 226 ----taag~VRR~L~~aGF~V~k~~G~g~KReml~A~ 258 (308)
T 3vyw_A 226 ----SSSLSVRKSLLTLGFKVGSSREIGRKRKGTVAS 258 (308)
T ss_dssp ----CCCHHHHHHHHHTTCEEEEEECC---CEEEEEE
T ss_pred ----eCcHHHHHHHHHCCCEEEecCCCCCCCceeEEe
Confidence 012345778899999988776665545555553
No 303
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.89 E-value=0.0075 Score=57.67 Aligned_cols=97 Identities=12% Similarity=0.034 Sum_probs=63.8
Q ss_pred hHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC------CCCe
Q 043533 135 TSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF-------------PGIKCTVLDL-PHAVANLPE------ADNL 194 (301)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-------------P~~~~~~~Dl-p~~~~~a~~------~~ri 194 (301)
+..++ +.++ .....+|+|-+||+|.++....+.- ....+.++|+ +.+...|+. .+..
T Consensus 206 v~lmv-~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~ 282 (530)
T 3ufb_A 206 VRFMV-EVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYP 282 (530)
T ss_dssp HHHHH-HHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHH-Hhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccc
Confidence 44455 5554 4456799999999999998876531 1356899999 666555542 2233
Q ss_pred EEEeCCCCC-CC----C--cchhHHH---------------------------HHHHHHHHhcc-------cCCCCcEEE
Q 043533 195 KYIAGDMLR-FI----P--PANAFLF---------------------------KILKKRREAIA-------SNGERGKVI 233 (301)
Q Consensus 195 ~~~~~D~~~-~~----p--~~D~i~~---------------------------~iL~~~~~aL~-------p~~~gg~l~ 233 (301)
.+..+|.+. +. + .||+|+. ..++.+.+.|+ | ||++.
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~---gGr~a 359 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN---GGRAA 359 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS---CCEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC---CceEE
Confidence 556777664 32 1 1787776 45777777776 5 88887
Q ss_pred EEee
Q 043533 234 IIDI 237 (301)
Q Consensus 234 i~e~ 237 (301)
++=+
T Consensus 360 vVlP 363 (530)
T 3ufb_A 360 VVVP 363 (530)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7643
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.62 E-value=0.014 Score=51.40 Aligned_cols=41 Identities=15% Similarity=0.004 Sum_probs=34.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE 190 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~ 190 (301)
.....|||++||+|.++.++++. +.+++++|+ |.+++.|++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 34679999999999999998887 468999999 888777663
No 305
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.93 E-value=0.27 Score=38.76 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=72.1
Q ss_pred HHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-----hHHHhcCCC---
Q 043533 119 INQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-----PHAVANLPE--- 190 (301)
Q Consensus 119 ~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-----p~~~~~a~~--- 190 (301)
+.+.|..-|.+.- ....+.. ..+. .-...|+|+|=|.|.+=-.|.+.+|+-++.++|. |+.+.....
T Consensus 15 RLDsfirRltaQR-~~L~~a~-~~v~---~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~il 89 (174)
T 3iht_A 15 RLDLFIDRMVSQR-ACLEHAI-AQTA---GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLIL 89 (174)
T ss_dssp HHHHHHHHHHHHH-HHHHHHH-HHTT---TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEE
T ss_pred HHHHHHHHHHHHH-HHHHHHH-HHhc---CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheec
Confidence 4456666665321 1122233 3322 2357899999999999999999999999999997 444333221
Q ss_pred --------------CCCeEEEeCCCCCCCCcchhHHHHHH-HHHHHhcccCCCCcEEEEEeeee
Q 043533 191 --------------ADNLKYIAGDMLRFIPPANAFLFKIL-KKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 191 --------------~~ri~~~~~D~~~~~p~~D~i~~~iL-~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
+..+.+...|+=.-.++-|+.+..-| .-+...|.| |.++|...-+
T Consensus 90 Gdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~----GGi~vS~~pl 149 (174)
T 3iht_A 90 GDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQ----GGLMVSSDRM 149 (174)
T ss_dssp SCHHHHHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEE----EEEEEESSCC
T ss_pred ccHHHHHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcC----CcEEEeCCcc
Confidence 45677777777544555677777444 445578899 5566665433
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.97 E-value=0.069 Score=46.54 Aligned_cols=100 Identities=17% Similarity=0.097 Sum_probs=68.6
Q ss_pred HHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCC----CC
Q 043533 136 SFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMLRF----IP 206 (301)
Q Consensus 136 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~----~~ri~~~~~D~~~~----~p 206 (301)
..++ +.+.. + +...+||+=+|||.+++++++ +.-+++.+|+ +..++..++ .++++++..|.++- .|
T Consensus 81 ~~yf-~~l~~-~-n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~ 155 (283)
T 2oo3_A 81 LEYI-SVIKQ-I-NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLP 155 (283)
T ss_dssp HHHH-HHHHH-H-SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCS
T ss_pred HHHH-HHHHH-h-cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcC
Confidence 3455 55541 3 356789999999999999998 3478999999 777665554 57899999996541 12
Q ss_pred --c-chhHHH-----------HHHHHHHHhcccCCCCcEEEEEeeeeCC
Q 043533 207 --P-ANAFLF-----------KILKKRREAIASNGERGKVIIIDIVINA 241 (301)
Q Consensus 207 --~-~D~i~~-----------~iL~~~~~aL~p~~~gg~l~i~e~~~~~ 241 (301)
. +|+|++ ++++.+.+..+- .++|.++|-=++...
T Consensus 156 ~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r-~~~Gi~v~WYPi~~~ 203 (283)
T 2oo3_A 156 PPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSK-FSTGLYCVWYPVVNK 203 (283)
T ss_dssp CTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHH-CTTSEEEEEEEESSH
T ss_pred CCCCccEEEECCCCCCCcHHHHHHHHHHHhCcc-CCCeEEEEEEeccch
Confidence 2 888888 556556554432 126777776666554
No 307
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.69 E-value=0.019 Score=64.41 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=59.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCCC---CCeEEEeCCCCCC---CCc-chhHHH---
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPG-----IKCTVLDL-PHAVANLPEA---DNLKYIAGDMLRF---IPP-ANAFLF--- 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~-----~~~~~~Dl-p~~~~~a~~~---~ri~~~~~D~~~~---~p~-~D~i~~--- 213 (301)
.-+||+||+|+|..+..+++...+ .+.+..|. +...+.+++. -.++...-|...+ .+. ||+|++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 358999999999877776665432 25677777 5555555541 1233221233222 223 888875
Q ss_pred --------HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCCcee
Q 043533 214 --------KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVFSHY 285 (301)
Q Consensus 214 --------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~~~ 285 (301)
..|+++++.|+| ||++++.+..... ..+ .....++-. ...++...+.++|.++|.++||..+
T Consensus 1321 l~~t~~~~~~l~~~~~lL~p---~G~l~~~e~~~~~-~~g----~~~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf~~~ 1390 (2512)
T 2vz8_A 1321 LATLGDPAVAVGNMAATLKE---GGFLLLHTLLAGH-PLG----EMVGFLTSP--EQGGRHLLSQDQWESLFAGASLHLV 1390 (2512)
T ss_dssp -----------------------CCEEEEEEC---------------------------------CTTTTSSTTTTEEEE
T ss_pred ccccccHHHHHHHHHHhcCC---CcEEEEEeccccc-ccc----ccccccccc--cccCCcccCHHHHHHHHHhCCCcee
Confidence 678999999999 8998887753210 000 000001000 0011223467789999999999987
Q ss_pred EEEe
Q 043533 286 KITP 289 (301)
Q Consensus 286 ~~~~ 289 (301)
....
T Consensus 1391 ~~~~ 1394 (2512)
T 2vz8_A 1391 ALKR 1394 (2512)
T ss_dssp EEEE
T ss_pred eecc
Confidence 6643
No 308
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.54 E-value=0.49 Score=46.47 Aligned_cols=135 Identities=14% Similarity=0.110 Sum_probs=86.6
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC--------CCeEEEeechHHHhcCCC------------------------------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFP--------GIKCTVLDLPHAVANLPE------------------------------ 190 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P--------~~~~~~~Dlp~~~~~a~~------------------------------ 190 (301)
+...||-||||.=....+|...+| ++++.=+|+|++++.=++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 457899999999999999998766 677888888987652110
Q ss_pred CCCeEEEeCCCCCC--C-----------Cc------chhHHH--------HHHHHHHHhcccCCCCcEEEEEeeeeCCCc
Q 043533 191 ADNLKYIAGDMLRF--I-----------PP------ANAFLF--------KILKKRREAIASNGERGKVIIIDIVINAEE 243 (301)
Q Consensus 191 ~~ri~~~~~D~~~~--~-----------p~------~D~i~~--------~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~ 243 (301)
.++..+++.|+.+. + +. +..+++ ++|+.+.+ + + ++.++++|.+.+...
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~---~~~~~~~e~~~~~~~ 261 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-E---NSHFIILEQLIPKGP 261 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-S---SEEEEEEEECCTTCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-C---CceEEEEEeecCCCC
Confidence 15889999999862 1 11 122222 88888874 4 5 588999998877543
Q ss_pred cchhhhhhhhhhchhhcc--c-cCCccCCHHHHHHHHHhCCCceeEEEec
Q 043533 244 EEHELTETKFLFDIVMSV--N-ATGKERTESEWAKLFFDAVFSHYKITPI 290 (301)
Q Consensus 244 ~~~~~~~~~~~~d~~~~~--~-~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 290 (301)
.++ +.. .+...+...- . .-....+.++..+.|.+.||+.+....+
T Consensus 262 ~d~-f~~-~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 262 FEP-FSK-QMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TSH-HHH-HHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred CCh-HHH-HHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 332 111 0000110000 0 0012347999999999999998776543
No 309
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.87 E-value=0.3 Score=41.84 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=33.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP 189 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~ 189 (301)
.....|||..||+|.++.+..+. +.+++++|+ |..++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 45679999999999999999887 468999999 76666544
No 310
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=90.41 E-value=0.21 Score=42.88 Aligned_cols=87 Identities=15% Similarity=0.199 Sum_probs=60.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHH-------CCCCeEEEeec----hHHH------------------------h------
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEA-------FPGIKCTVLDL----PHAV------------------------A------ 186 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~-------~P~~~~~~~Dl----p~~~------------------------~------ 186 (301)
.-++.|+++|+-.|..++.++.. +++-++.++|. |+.- .
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 33579999999999988887652 56789999995 3310 0
Q ss_pred -cCCC----CCCeEEEeCCCCCCC-------Cc--chhHHH---------HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 187 -NLPE----ADNLKYIAGDMLRFI-------PP--ANAFLF---------KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 187 -~a~~----~~ri~~~~~D~~~~~-------p~--~D~i~~---------~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..+. .++|+++.|++.+.+ |. +|++++ ..|..+...|+| |.++|+|..
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~----GGvIv~DD~ 218 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTK----GSIVAFDEL 218 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEE----EEEEEESST
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCC----CcEEEEcCC
Confidence 0001 378999999986522 22 455544 788999999999 557777654
No 311
>1jhg_A Trp operon repressor; complex (regulatory protein-peptide), DNA-binding regulatory complex (regulatory protein-peptide) complex; HET: TRP; 1.30A {Escherichia coli} SCOP: a.4.12.1 PDB: 1co0_A* 1mi7_R 1p6z_R 1wrp_R* 1zt9_A* 2oz9_R* 3ssw_R 3wrp_A 1rcs_A* 1wrs_R* 1wrt_R 2xdi_A 3ssx_R* 1trr_A* 1tro_A*
Probab=89.84 E-value=0.31 Score=35.51 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=32.3
Q ss_pred CChHHH--HHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 7 QGAKEL--FQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 7 ~~~~~~--~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|. ++.|++|+..|.+|+.|..|||+.+|++...+.
T Consensus 36 LT~~Er~~l~~R~~l~~~L~~ge~TQREIA~~lGiS~stIS 76 (101)
T 1jhg_A 36 LTPDEREALGTRVRIIEELLRGEMSQRELKNELGAGIATIT 76 (101)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHCCChhhhh
Confidence 366676 456999999999889999999999999876554
No 312
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=87.75 E-value=0.22 Score=35.62 Aligned_cols=44 Identities=11% Similarity=0.273 Sum_probs=35.6
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce-----------e-ecCCCeEEcChhcc
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT-----------V-NGQEEAYGLTAAST 60 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~-----------v-e~~~~~y~~t~~s~ 60 (301)
.++.|+..| +++.|+.|||+.++++...+. | ... |.|.+++.++
T Consensus 32 ~r~~Il~~L-~~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~-g~y~l~~~g~ 87 (96)
T 1y0u_A 32 VRRKILRML-DKGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG-ERWVVTDAGK 87 (96)
T ss_dssp HHHHHHHHH-HTTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-TEEEECTTTC
T ss_pred HHHHHHHHH-cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC-CEEEECCCch
Confidence 467889999 899999999999999888776 2 223 6899998765
No 313
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=87.36 E-value=0.78 Score=42.05 Aligned_cols=54 Identities=7% Similarity=-0.032 Sum_probs=40.5
Q ss_pred cCCCeEEEecCCccHHHHHHH-HHCCC-CeEEEeec-hHHHhcCCC---------C-CCeEEEeCCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIIS-EAFPG-IKCTVLDL-PHAVANLPE---------A-DNLKYIAGDM 201 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~-~~~P~-~~~~~~Dl-p~~~~~a~~---------~-~ri~~~~~D~ 201 (301)
.+...|+|||++.|.++..++ +.++. .+++.++- |...+..++ . ++++++..-.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 567899999999999999988 66775 79999998 765554432 2 5677666433
No 314
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=85.11 E-value=0.29 Score=36.32 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=38.3
Q ss_pred HHHHHhHHhcC-CCCCHHHHHHhc--CCCCCCce-----------ee-cCCCeEEcChhcchhhc
Q 043533 15 GQAQLYKLIHG-RAITLSELVSAL--DIQPTKTT-----------VN-GQEEAYGLTAASTLLIK 64 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~elA~~~--~~~~~~l~-----------ve-~~~~~y~~t~~s~~L~~ 64 (301)
++..|.+.|.+ |++|+.+||+.+ +++...+. |+ ...+.|.+|+.+..+..
T Consensus 14 ~d~~IL~~L~~~g~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~rg~Y~LT~~G~~~l~ 78 (111)
T 3b73_A 14 WDDRILEIIHEEGNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLANGVYVITEEGEAYLN 78 (111)
T ss_dssp HHHHHHHHHHHHSCBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECSTTCEEECHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecCCceEEECchHHHHHH
Confidence 35677888864 999999999999 88888776 22 33458999999984443
No 315
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=84.95 E-value=0.79 Score=32.89 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|.++|.|+.|||+.+|++...+.
T Consensus 24 ~r~~Il~~L~~~~~~~~ela~~l~is~~tvs 54 (102)
T 3pqk_A 24 VRLMLVCTLVEGEFSVGELEQQIGIGQPTLS 54 (102)
T ss_dssp HHHHHHHHHHTCCBCHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHCcCHHHHH
Confidence 4888899998899999999999999998776
No 316
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=84.77 E-value=0.65 Score=45.37 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=23.9
Q ss_pred CeEEEecCCccHHHHHHHHHC-------CC-----CeEEEeec
Q 043533 151 GSLVDVGGGNVSFSRIISEAF-------PG-----IKCTVLDL 181 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~-------P~-----~~~~~~Dl 181 (301)
-+|+|+|-|+|.......+.+ |+ ++++.++.
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~ 110 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 110 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeC
Confidence 489999999999888776642 32 56888886
No 317
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.32 E-value=0.74 Score=45.11 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=24.9
Q ss_pred CCeEEEecCCccHHHHHHHHHC-------CC-----CeEEEeec
Q 043533 150 LGSLVDVGGGNVSFSRIISEAF-------PG-----IKCTVLDL 181 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~-------P~-----~~~~~~Dl 181 (301)
.-+|+|+|-|+|.....+.+.+ |+ ++++.++.
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~ 102 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEK 102 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeC
Confidence 3589999999999888876642 33 67888886
No 318
>3kor_A Possible Trp repressor; putative DNA-binding Trp repressor, TRPR like protein, struc genomics, transcription; 1.60A {Staphylococcus aureus}
Probab=81.62 E-value=1.3 Score=33.13 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=31.4
Q ss_pred ChHHH--HHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 8 GAKEL--FQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 8 ~~~~~--~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
++.|+ |+.|+.|+..|.+| .|..|||+.+|++..-+.
T Consensus 55 T~~E~~aLs~R~eV~klL~~G-~syreIA~~~g~S~aTIs 93 (119)
T 3kor_A 55 TVNEIQSLSQRLQVAKMIKQG-YTYATIEQESGASTATIS 93 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT-CCHHHHHHHHCCCHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHcC-CCHHHHHHHHCCCHHHHH
Confidence 56666 66789999999977 999999999999877664
No 319
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=80.55 E-value=0.3 Score=32.58 Aligned_cols=31 Identities=6% Similarity=0.220 Sum_probs=25.4
Q ss_pred HHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHG--RAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~ 45 (301)
.+..|.++|.+ +|+|..|||+.+|++...+.
T Consensus 11 ~~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~ 43 (67)
T 2heo_A 11 LEQKILQVLSDDGGPVAIFQLVKKCQVPKKTLN 43 (67)
T ss_dssp HHHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHH
Confidence 46677888853 68999999999999987766
No 320
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.52 E-value=2 Score=32.62 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=34.4
Q ss_pred CeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC
Q 043533 151 GSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR 203 (301)
Q Consensus 151 ~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~ 203 (301)
.+|+=+|+|. |......+.+. +.+++++|. ++.++.+++ ..+.++.||..+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~ 60 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE-RGVRAVLGNAAN 60 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH-TTCEEEESCTTS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-cCCCEEECCCCC
Confidence 5788888864 44333333333 568999999 777766653 567788899865
No 321
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=78.64 E-value=0.67 Score=32.12 Aligned_cols=50 Identities=8% Similarity=0.135 Sum_probs=37.0
Q ss_pred HHHHHHHHHhHHhc-CCCCCHHHHHHhcCCCCC-Cce-----------ee---cCCCeEEcChhcc
Q 043533 11 ELFQGQAQLYKLIH-GRAITLSELVSALDIQPT-KTT-----------VN---GQEEAYGLTAAST 60 (301)
Q Consensus 11 ~~~~~~l~lF~~L~-~~p~t~~elA~~~~~~~~-~l~-----------ve---~~~~~y~~t~~s~ 60 (301)
++-.++-.|.+.|. .||.|+.+||+.+|++.. .++ |+ ...-.|.+|+.++
T Consensus 8 ~~~~~~~~IL~~Lk~~g~~ta~eiA~~Lgit~~~aVr~hL~~Le~eGlV~~~~~gRP~w~LT~~g~ 73 (79)
T 1xmk_A 8 DMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKR 73 (79)
T ss_dssp HHHHHHHHHHHHHHHTCCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEECSSSCEEEECHHHH
T ss_pred cchhHHHHHHHHHHHcCCcCHHHHHHHcCCCcHHHHHHHHHHHHHCCCEEecCCCCCCeEeCHhHH
Confidence 44456777788886 599999999999999998 776 21 1112788888765
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.51 E-value=2.2 Score=38.27 Aligned_cols=89 Identities=9% Similarity=0.011 Sum_probs=57.5
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC----CCCCC----CC-cchhHHH-
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG----DMLRF----IP-PANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~----D~~~~----~p-~~D~i~~- 213 (301)
+....+||-+|+| .|.++..+++..---+++++|. ++-++.+++ +....+-.. |+.+. .+ .+|+++-
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 5667888889876 4888888998763338999996 666666654 111111111 11100 11 2666664
Q ss_pred ----HHHHHHHHhcccCCCC-cEEEEEeee
Q 043533 214 ----KILKKRREAIASNGER-GKVIIIDIV 238 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~g-g~l~i~e~~ 238 (301)
..++.+.+.|++ | |+++++-..
T Consensus 271 ~g~~~~~~~~~~~l~~---g~G~iv~~G~~ 297 (378)
T 3uko_A 271 IGNVSVMRAALECCHK---GWGTSVIVGVA 297 (378)
T ss_dssp SCCHHHHHHHHHTBCT---TTCEEEECSCC
T ss_pred CCCHHHHHHHHHHhhc---cCCEEEEEccc
Confidence 789999999999 7 998887653
No 323
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=77.89 E-value=2.5 Score=38.22 Aligned_cols=51 Identities=14% Similarity=0.053 Sum_probs=36.8
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEeCCCCC
Q 043533 151 GSLVDVGGGNVSFSRIISEAFPGIK-CTVLDL-PHAVANLPE-ADNLKYIAGDMLR 203 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~P~~~-~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~ 203 (301)
-+++|+-||.|.++..+.++. .+ +.++|. +..++..+. .+...++.+|+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~ 56 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSL 56 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGG
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhh
Confidence 379999999999999999885 55 458888 665554433 3455666777654
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=76.69 E-value=0.75 Score=40.88 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=57.4
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCCCC-cchhHHH-----HHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLRFIP-PANAFLF-----KILK 217 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~~~p-~~D~i~~-----~iL~ 217 (301)
.....+||-+|+|. |.++..+++.. +.+++++|. ++-.+.+++ +....+ .|. +.+. .+|+++- ..++
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~-~~~~~~~D~vid~~g~~~~~~ 249 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY--TDP-KQCKEELDFIISTIPTHYDLK 249 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE--SSG-GGCCSCEEEEEECCCSCCCHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec--CCH-HHHhcCCCEEEECCCcHHHHH
Confidence 66778999998865 88889999887 569999986 444444443 212222 222 1222 3777664 4889
Q ss_pred HHHHhcccCCCCcEEEEEee
Q 043533 218 KRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 218 ~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+.+.|++ +|+++++-.
T Consensus 250 ~~~~~l~~---~G~iv~~G~ 266 (348)
T 3two_A 250 DYLKLLTY---NGDLALVGL 266 (348)
T ss_dssp HHHTTEEE---EEEEEECCC
T ss_pred HHHHHHhc---CCEEEEECC
Confidence 99999999 899988754
No 325
>3frw_A Putative Trp repressor protein; structural genomics, APC21159, PSI-2, P structure initiative; 2.05A {Ruminococcus obeum atcc 29174} PDB: 3g1c_A
Probab=76.30 E-value=3.3 Score=30.28 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=30.7
Q ss_pred ChHHHHH--HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 8 GAKELFQ--GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 8 ~~~~~~~--~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
++.|+.+ .++.|...|.+| .|..+||+.+|++..-+.
T Consensus 38 T~~E~~alaqR~~Ia~lL~~G-~SyreIa~~tG~StaTIs 76 (107)
T 3frw_A 38 TINELLSLSQRFEVAKMLTDK-RTYLDISEKTGASTATIS 76 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHCccHHHHH
Confidence 6677755 589999999977 999999999999866543
No 326
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=75.64 E-value=3.4 Score=37.51 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=36.7
Q ss_pred chHHHHHHHHhhcccccchHHHHHhhhhh-cccCCCeEEEecCCccHHHHHHHHH---C----CCCeEEEeec
Q 043533 117 PAINQRFNEAMASDSEIMTSFVVKSECKQ-IFEGLGSLVDVGGGNVSFSRIISEA---F----PGIKCTVLDL 181 (301)
Q Consensus 117 ~~~~~~f~~am~~~~~~~~~~~~~~~~~~-~~~~~~~vlDvGgG~G~~~~~l~~~---~----P~~~~~~~Dl 181 (301)
|+....|.+.... +++ +.+.. +.+..-.|+++|+|+|.++..+++. . ..+++.++|.
T Consensus 55 peis~~FGe~la~-------~~~-~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~ 119 (387)
T 1zkd_A 55 PEISQMFGELLGL-------WSA-SVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEI 119 (387)
T ss_dssp HHHCHHHHHHHHH-------HHH-HHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECC
T ss_pred CchHHHHHHHHHH-------HHH-HHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEec
Confidence 5555566665542 233 32221 1233447999999999999998865 2 3468999988
No 327
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.57 E-value=1.2 Score=39.57 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=56.2
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-CCCeEEEe----CCCCCCC--C-cchhHHH--
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAF-PGIKCTVLDL-PHAVANLPE-ADNLKYIA----GDMLRFI--P-PANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~-P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~----~D~~~~~--p-~~D~i~~-- 213 (301)
. ...+||-+|+|. |.++..+++.. |+.+++++|. ++-.+.+++ +.. .++. .|+.+.+ . .+|+++-
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~~g~g~D~vid~~ 246 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD-YVSEMKDAESLINKLTDGLGASIAIDLV 246 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS-EEECHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC-EEeccccchHHHHHhhcCCCccEEEECC
Confidence 5 678999999764 77888888864 6789999996 555555443 111 1111 1111111 2 2676664
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 247 g~~~~~~~~~~~l~~---~G~iv~~g~ 270 (344)
T 2h6e_A 247 GTEETTYNLGKLLAQ---EGAIILVGM 270 (344)
T ss_dssp CCHHHHHHHHHHEEE---EEEEEECCC
T ss_pred CChHHHHHHHHHhhc---CCEEEEeCC
Confidence 489999999999 899887654
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=75.08 E-value=1.6 Score=35.00 Aligned_cols=84 Identities=12% Similarity=0.041 Sum_probs=54.3
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-C--------C-C-cchhH
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-F--------I-P-PANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~--------~-p-~~D~i 211 (301)
+....+||.+| ||.|..+..+++.. +.+++++|. ++..+.+++ +....+ |..+ . . . .+|++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVG---DSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEE---ETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEe---eCCcHHHHHHHHHHhCCCCCeEE
Confidence 56678999999 46677777777764 468999988 544444433 111111 2221 1 1 1 25665
Q ss_pred HH----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 212 LF----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 212 ~~----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+- ..++.+.+.|+| ||+++++-.
T Consensus 112 i~~~g~~~~~~~~~~l~~---~G~~v~~g~ 138 (198)
T 1pqw_A 112 LNSLAGEAIQRGVQILAP---GGRFIELGK 138 (198)
T ss_dssp EECCCTHHHHHHHHTEEE---EEEEEECSC
T ss_pred EECCchHHHHHHHHHhcc---CCEEEEEcC
Confidence 54 788999999999 898888754
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=74.85 E-value=7.5 Score=34.67 Aligned_cols=131 Identities=12% Similarity=0.134 Sum_probs=72.6
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEE--eCCCCC---C---C-C-cchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYI--AGDMLR---F---I-P-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~--~~D~~~---~---~-p-~~D~i~~ 213 (301)
+....+||-+|+|. |.++..+++..---+++++|. ++-.+.+++ +....+. ..|+.+ . . + .+|+++-
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 56678888888765 888889998864338999987 555554443 1111110 112111 0 1 1 2677663
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhh-hhhchhhccccCCccCCHHHHHHHHHhCCCc
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETK-FLFDIVMSVNATGKERTESEWAKLFFDAVFS 283 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~-~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf~ 283 (301)
..++.+.+.|++ ||+++++-......... +.... ....+.+.... ...+...+..+++++-.++
T Consensus 260 ~~G~~~~~~~~~~~l~~---~G~vv~~G~~~~~~~~~--~~~~~~~~~~~~i~g~~-~~~~~~~~~~~l~~~g~i~ 329 (370)
T 4ej6_A 260 CAGVAETVKQSTRLAKA---GGTVVILGVLPQGEKVE--IEPFDILFRELRVLGSF-INPFVHRRAADLVATGAIE 329 (370)
T ss_dssp CSCCHHHHHHHHHHEEE---EEEEEECSCCCTTCCCC--CCHHHHHHTTCEEEECC-SCTTCHHHHHHHHHTTCSC
T ss_pred CCCCHHHHHHHHHHhcc---CCEEEEEeccCCCCccc--cCHHHHHhCCcEEEEec-cChHHHHHHHHHHHcCCCC
Confidence 789999999999 89998876543321111 10000 11122221111 1234567777777776664
No 330
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.48 E-value=2.1 Score=37.59 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=45.0
Q ss_pred CeEEEecCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCcchhHHH--------HHHHH
Q 043533 151 GSLVDVGGGN--VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FIPPANAFLF--------KILKK 218 (301)
Q Consensus 151 ~~vlDvGgG~--G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~p~~D~i~~--------~iL~~ 218 (301)
.+|.=||+|. +.++..+++.....+++++|. ++.++.+.+..-+.-...|..+ -...+|+|++ .++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 113 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKK 113 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHHHH
Confidence 6788898774 234555555544348999998 6666555432222112233322 2334777766 78888
Q ss_pred HHHhccc
Q 043533 219 RREAIAS 225 (301)
Q Consensus 219 ~~~aL~p 225 (301)
+...+++
T Consensus 114 l~~~l~~ 120 (314)
T 3ggo_A 114 LSYILSE 120 (314)
T ss_dssp HHHHSCT
T ss_pred HhhccCC
Confidence 8888888
No 331
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=74.25 E-value=0.77 Score=40.72 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=58.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC-CCCCC---C-C--cchhHHH---
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG-DMLRF---I-P--PANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~-D~~~~---~-p--~~D~i~~--- 213 (301)
.....+||-+|+|. |.++..+++.....+++++|. ++-.+.+++ +....+-.. |+.+. . + .+|+++-
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence 56678899888765 889999999876789999997 655555554 111111111 11111 0 1 2566553
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.+.|++ +|+++++-..
T Consensus 249 ~~~~~~~~~~~l~~---~G~iv~~G~~ 272 (345)
T 3jv7_A 249 AQSTIDTAQQVVAV---DGHISVVGIH 272 (345)
T ss_dssp CHHHHHHHHHHEEE---EEEEEECSCC
T ss_pred CHHHHHHHHHHHhc---CCEEEEECCC
Confidence 589999999999 8999887643
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=74.12 E-value=2.4 Score=37.31 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=56.8
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCCC----CcchhHHH----
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRFI----PPANAFLF---- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~~----p~~D~i~~---- 213 (301)
.....+||-+|+|. |.++..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+.+ +.+|+++-
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~ 242 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVS 242 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCC
Confidence 56678888899764 99999999987 569999997 665555543 211111111 111000 12455443
Q ss_pred -HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 243 ~~~~~~~~~~l~~---~G~iv~~G~ 264 (340)
T 3s2e_A 243 PKAFSQAIGMVRR---GGTIALNGL 264 (340)
T ss_dssp HHHHHHHHHHEEE---EEEEEECSC
T ss_pred HHHHHHHHHHhcc---CCEEEEeCC
Confidence 789999999999 899887754
No 333
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=73.92 E-value=12 Score=28.43 Aligned_cols=53 Identities=21% Similarity=0.129 Sum_probs=33.3
Q ss_pred CCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCC
Q 043533 149 GLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDML 202 (301)
Q Consensus 149 ~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~ 202 (301)
...+|+=+|+|. |......+.+. +.+++++|. ++.++.++...++.++.+|..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~ 72 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAA 72 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCC
Confidence 357899888754 33333344443 468999998 677776652334566667764
No 334
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=73.43 E-value=1.2 Score=31.79 Aligned_cols=45 Identities=11% Similarity=0.165 Sum_probs=35.1
Q ss_pred HHhHHhcCCCCCHHHHHHhcCCCCCCce-----------eecCCCeEEcChhcchhh
Q 043533 18 QLYKLIHGRAITLSELVSALDIQPTKTT-----------VNGQEEAYGLTAASTLLI 63 (301)
Q Consensus 18 ~lF~~L~~~p~t~~elA~~~~~~~~~l~-----------ve~~~~~y~~t~~s~~L~ 63 (301)
.+-..+..+ ++..+||..+|++++.++ |+...+.|.+|+.|..+.
T Consensus 12 ~IL~~i~~~-~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~~~~~LT~kG~~~l 67 (95)
T 1r7j_A 12 AILEACKSG-SPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGKQYMLTKKGEELL 67 (95)
T ss_dssp HHHHHHTTC-BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHH
T ss_pred HHHHHHHcC-CCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEECCeeEEChhHHHHH
Confidence 334455556 999999999999999988 255567899999998443
No 335
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=72.04 E-value=0.29 Score=44.06 Aligned_cols=88 Identities=17% Similarity=0.160 Sum_probs=57.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEe--CCCCCC----CC-cchhHHH--
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIA--GDMLRF----IP-PANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~--~D~~~~----~p-~~D~i~~-- 213 (301)
+....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +....+-. .|+.+. .+ .+|+++-
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 56678999999876 88899999876 45 6899986 665555543 11111111 111110 11 2666654
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.+.|++ +|+++++-..
T Consensus 267 g~~~~~~~~~~~l~~---~G~iv~~G~~ 291 (371)
T 1f8f_A 267 GSPEILKQGVDALGI---LGKIAVVGAP 291 (371)
T ss_dssp CCHHHHHHHHHTEEE---EEEEEECCCC
T ss_pred CCHHHHHHHHHHHhc---CCEEEEeCCC
Confidence 688999999999 8998887653
No 336
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=71.97 E-value=3.1 Score=36.78 Aligned_cols=36 Identities=11% Similarity=-0.059 Sum_probs=27.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhc
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIK-CTVLDL-PHAVAN 187 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~-~~~~Dl-p~~~~~ 187 (301)
..+++|+-||.|.++..+.++. .+ +..+|. +..++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t 48 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEV 48 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHH
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHH
Confidence 3689999999999999999874 44 566888 555443
No 337
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=71.62 E-value=2.3 Score=38.43 Aligned_cols=87 Identities=16% Similarity=0.092 Sum_probs=58.2
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCCCCCeEEEeC---CC-CCCC-----C-cchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPEADNLKYIAG---DM-LRFI-----P-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~ri~~~~~---D~-~~~~-----p-~~D~i~~ 213 (301)
+....+||.+|+|. |.++..+++.. +. +++++|. ++-.+.+++.. ..++.. |+ .+.+ . .+|+++-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 66678999999876 88999999876 45 8999997 66666655421 123321 21 1100 1 2566553
Q ss_pred ----H---------------HHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ----K---------------ILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ----~---------------iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
. .++.+.+.|++ ||+++++-..
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~---gG~iv~~G~~ 301 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVRA---GGAIGIPGIY 301 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEE---EEEEECCSCC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHhc---CCEEEEeccc
Confidence 2 68999999999 8998877643
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=71.45 E-value=3.5 Score=36.58 Aligned_cols=87 Identities=15% Similarity=0.220 Sum_probs=56.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeC-----CCCCCC-----CcchhHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAG-----DMLRFI-----PPANAFL 212 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~-----D~~~~~-----p~~D~i~ 212 (301)
.....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +....+-.. |+.+.+ ..+|+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 56678999999875 88899999987 55 8999996 555554443 111111111 111100 1256665
Q ss_pred H-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 213 F-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 213 ~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
- ..++.+.+.|++ ||+++++-.
T Consensus 248 d~~g~~~~~~~~~~~l~~---~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTGAEASIQAGIYATRS---GGTLVLVGL 274 (356)
T ss_dssp ECSCCHHHHHHHHHHSCT---TCEEEECSC
T ss_pred ECCCChHHHHHHHHHhcC---CCEEEEEec
Confidence 4 578999999999 899988754
No 339
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=71.08 E-value=0.73 Score=41.34 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=55.7
Q ss_pred CCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC-CCCC---CC-C-cchhHHH-----
Q 043533 149 GLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG-DMLR---FI-P-PANAFLF----- 213 (301)
Q Consensus 149 ~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~-D~~~---~~-p-~~D~i~~----- 213 (301)
...+||-+| |+.|.++..+++.....+++++|. ++-.+.+++ +....+-.. |+.+ .. + .+|+++-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~ 250 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTD 250 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCch
Confidence 456888887 577889999999856789999998 555555543 111111111 1111 11 1 2676654
Q ss_pred HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
..++.+.+.|++ +|+++++.
T Consensus 251 ~~~~~~~~~l~~---~G~iv~~g 270 (363)
T 4dvj_A 251 KHAAEIADLIAP---QGRFCLID 270 (363)
T ss_dssp HHHHHHHHHSCT---TCEEEECS
T ss_pred hhHHHHHHHhcC---CCEEEEEC
Confidence 588999999999 89999873
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=70.50 E-value=2 Score=38.12 Aligned_cols=87 Identities=11% Similarity=0.173 Sum_probs=56.2
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC---CCCCC----C----Cc-chhH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG---DMLRF----I----PP-ANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~---D~~~~----~----p~-~D~i 211 (301)
.....+||-+|+|. |.++..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+. . .. +|++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 56678899999764 78888899876 567888986 555554443 111112111 21111 1 12 6766
Q ss_pred HH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 212 LF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 212 ~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+- ..++.+.+.|++ +|+++++-.
T Consensus 245 id~~g~~~~~~~~~~~l~~---~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCSGNEKCITIGINITRT---GGTLMLVGM 272 (352)
T ss_dssp EECSCCHHHHHHHHHHSCT---TCEEEECSC
T ss_pred EECCCCHHHHHHHHHHHhc---CCEEEEEec
Confidence 54 578999999999 899988754
No 341
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=70.22 E-value=4.7 Score=35.76 Aligned_cols=128 Identities=12% Similarity=0.039 Sum_probs=71.3
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-C-CCeEEEe-----CCCCCC----C-Cc-chh
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIK-CTVLDL-PHAVANLPE-A-DNLKYIA-----GDMLRF----I-PP-ANA 210 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~-~~~~Dl-p~~~~~a~~-~-~ri~~~~-----~D~~~~----~-p~-~D~ 210 (301)
+....+||-+|+|. |.++..+++.. +.+ +++.|. ++-.+.+++ . .-+.+.. .|+.+. . +. +|+
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 56678888888765 88899999886 555 888986 554444433 2 2233321 111110 1 22 666
Q ss_pred HHH-----HHHHHHHHhcccCCCCcEEEEEeeeeCCCccchhhhhhhhhhchhhccccCCccCCHHHHHHHHHhCCC
Q 043533 211 FLF-----KILKKRREAIASNGERGKVIIIDIVINAEEEEHELTETKFLFDIVMSVNATGKERTESEWAKLFFDAVF 282 (301)
Q Consensus 211 i~~-----~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~rt~~e~~~ll~~aGf 282 (301)
++- ..++.+.+.|++ ||+++++-........ + +.. .....+.+.....+ .....+..+++++--+
T Consensus 256 vid~~g~~~~~~~~~~~l~~---~G~iv~~G~~~~~~~~-~-~~~-~~~~~~~i~g~~~~-~~~~~~~~~l~~~g~i 325 (363)
T 3m6i_A 256 ALECTGVESSIAAAIWAVKF---GGKVFVIGVGKNEIQI-P-FMR-ASVREVDLQFQYRY-CNTWPRAIRLVENGLV 325 (363)
T ss_dssp EEECSCCHHHHHHHHHHSCT---TCEEEECCCCCSCCCC-C-HHH-HHHHTCEEEECCSC-SSCHHHHHHHHHTTSS
T ss_pred EEECCCChHHHHHHHHHhcC---CCEEEEEccCCCCccc-c-HHH-HHhcCcEEEEccCC-HHHHHHHHHHHHhCCC
Confidence 654 588999999999 8999887643222111 1 100 01112221111122 3456777777777666
No 342
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=69.69 E-value=1.2 Score=39.42 Aligned_cols=88 Identities=9% Similarity=0.102 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEE--EeCCCCCC----CC--cchhHHH--
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKY--IAGDMLRF----IP--PANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~--~~~D~~~~----~p--~~D~i~~-- 213 (301)
.....+||=+|+|. |.++..++++.-..+++++|. ++-.+.+++ .....+ ...|+.+. .. .+|.++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA 240 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec
Confidence 55678898899876 456777777777889999997 555555543 222111 11222111 11 1333332
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..+....+.+++ +|+++++-.
T Consensus 241 ~~~~~~~~~~~~l~~---~G~~v~~g~ 264 (348)
T 4eez_A 241 VARIAFEQAVASLKP---MGKMVAVAV 264 (348)
T ss_dssp SCHHHHHHHHHTEEE---EEEEEECCC
T ss_pred cCcchhheeheeecC---CceEEEEec
Confidence 788999999999 898887653
No 343
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=69.36 E-value=2.5 Score=29.78 Aligned_cols=31 Identities=16% Similarity=0.424 Sum_probs=27.5
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|.+++.|+.|||+.+|++...+.
T Consensus 24 ~r~~Il~~L~~~~~~~~ela~~l~is~~tvs 54 (98)
T 3jth_A 24 RRLQILCMLHNQELSVGELCAKLQLSQSALS 54 (98)
T ss_dssp HHHHHHHHTTTSCEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHCcCHHHHH
Confidence 4788899998899999999999999888766
No 344
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=69.33 E-value=2.1 Score=31.01 Aligned_cols=48 Identities=19% Similarity=0.175 Sum_probs=34.9
Q ss_pred HHHHhHHhcCCCCCHHHHHHhc-CCCCCCce-----------e----ecC---CCeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSAL-DIQPTKTT-----------V----NGQ---EEAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~-~~~~~~l~-----------v----e~~---~~~y~~t~~s~~L~ 63 (301)
++.|...|.+++.+..|||+.+ ++++..+. | ... .-.|.+|+.++.+.
T Consensus 16 ~~~IL~~L~~~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~ 82 (107)
T 2hzt_A 16 KXVILXHLTHGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLE 82 (107)
T ss_dssp HHHHHHHHTTCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HHHHHHHHHhCCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHH
Confidence 4556677778999999999999 99988776 2 111 12489998876443
No 345
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=69.20 E-value=2.3 Score=31.34 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=28.2
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|.++|.|+.|||+.+|++...+.
T Consensus 19 ~R~~Il~~L~~~~~~~~eLa~~l~is~~tvs 49 (118)
T 3f6o_A 19 TRRAVLGRLSRGPATVSELAKPFDMALPSFM 49 (118)
T ss_dssp HHHHHHHHHHTCCEEHHHHHTTCCSCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHhCcCHHHHH
Confidence 4899999999999999999999999888776
No 346
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=68.96 E-value=0.38 Score=43.34 Aligned_cols=87 Identities=10% Similarity=0.035 Sum_probs=56.0
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCCC-CcchhHHH-----HH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRFI-PPANAFLF-----KI 215 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~~-p~~D~i~~-----~i 215 (301)
+....+||-+|+|. |.++..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+.+ ..+|+++- ..
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~ 270 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN 270 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH
Confidence 66678999999874 88888999886 678888886 555444443 111111111 111112 23676664 46
Q ss_pred HHHHHHhcccCCCCcEEEEEee
Q 043533 216 LKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 216 L~~~~~aL~p~~~gg~l~i~e~ 237 (301)
++.+.+.|++ +|+++++-.
T Consensus 271 ~~~~~~~l~~---~G~iv~~G~ 289 (369)
T 1uuf_A 271 LDDFTTLLKR---DGTMTLVGA 289 (369)
T ss_dssp HHHHHTTEEE---EEEEEECCC
T ss_pred HHHHHHHhcc---CCEEEEecc
Confidence 8889999999 899887654
No 347
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=68.45 E-value=2.1 Score=32.53 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=36.1
Q ss_pred HHHHhHHhcCCCCCHHHHHHhc-CCCCCCce-----------e--e--c-C--CCeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSAL-DIQPTKTT-----------V--N--G-Q--EEAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~-~~~~~~l~-----------v--e--~-~--~~~y~~t~~s~~L~ 63 (301)
++-|.-.|..|+.++.||++.+ ++++..|. | . . + .-.|.+|+.++.|.
T Consensus 28 ~l~IL~~L~~g~~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV~R~~~~~d~r~v~y~LT~~G~~l~ 94 (131)
T 4a5n_A 28 KGILFYHMIDGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLE 94 (131)
T ss_dssp HHHHHHHHTTSCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HHHHHHHHhcCCcCHHHHHHHhcccCHHHHHHHHHHHHHCCCEEEEecCCCCCeEEEEECHhHHHHH
Confidence 4555666678999999999999 99988877 2 1 1 1 23599999998655
No 348
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=68.35 E-value=3.5 Score=35.27 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=43.0
Q ss_pred CeEEEecCCc--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCcchhHHH--------HHHHHH
Q 043533 151 GSLVDVGGGN--VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIPPANAFLF--------KILKKR 219 (301)
Q Consensus 151 ~~vlDvGgG~--G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~--------~iL~~~ 219 (301)
.+|.=||+|. +.++..|++..++.+++++|. ++.++.+.+...+.....|..+....+|+|++ .+++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l 86 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIKIL 86 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHHHH
Confidence 4688888775 334555666655678999998 55554433211111112333222334787776 666776
Q ss_pred HHh-ccc
Q 043533 220 REA-IAS 225 (301)
Q Consensus 220 ~~a-L~p 225 (301)
... +++
T Consensus 87 ~~~~l~~ 93 (290)
T 3b1f_A 87 ADLDLKE 93 (290)
T ss_dssp HTSCCCT
T ss_pred HhcCCCC
Confidence 666 777
No 349
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=67.98 E-value=0.71 Score=40.53 Aligned_cols=85 Identities=12% Similarity=0.110 Sum_probs=55.2
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-CCCeEEEe--CC-CCCCCCcchhHHH----HHH
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-ADNLKYIA--GD-MLRFIPPANAFLF----KIL 216 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-~~ri~~~~--~D-~~~~~p~~D~i~~----~iL 216 (301)
.....+||=+| ||.|.++..+++.. +.++++.+.++-.+.+++ +....+-. .| +.+....+|+++- ..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~ 228 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVG 228 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHH
Confidence 56678999886 67788999999887 568888887554555543 11111111 11 1112223676663 555
Q ss_pred HHHHHhcccCCCCcEEEEE
Q 043533 217 KKRREAIASNGERGKVIII 235 (301)
Q Consensus 217 ~~~~~aL~p~~~gg~l~i~ 235 (301)
..+.+.|++ +|+++.+
T Consensus 229 ~~~~~~l~~---~G~iv~~ 244 (321)
T 3tqh_A 229 IQSIDCLKE---TGCIVSV 244 (321)
T ss_dssp HHHGGGEEE---EEEEEEC
T ss_pred HHHHHhccC---CCEEEEe
Confidence 889999999 8998876
No 350
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=67.83 E-value=2.9 Score=30.08 Aligned_cols=31 Identities=6% Similarity=0.292 Sum_probs=27.5
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|+..|.+++.|+.|||+.+|++...+.
T Consensus 27 ~r~~IL~~L~~~~~~~~ela~~l~is~stvs 57 (106)
T 1r1u_A 27 NRIRIMELLSVSEASVGHISHQLNLSQSNVS 57 (106)
T ss_dssp HHHHHHHHHHHCCBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHCcCHHHHH
Confidence 4888999998889999999999999887776
No 351
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=67.52 E-value=4.2 Score=30.24 Aligned_cols=31 Identities=13% Similarity=0.359 Sum_probs=27.5
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|+..|.+++.++.|||+.+|++...+.
T Consensus 47 ~rl~IL~~L~~~~~s~~ela~~lgis~stvs 77 (122)
T 1r1t_A 47 NRLRLLSLLARSELCVGDLAQAIGVSESAVS 77 (122)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 3778999998889999999999999888776
No 352
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=67.47 E-value=2.1 Score=31.32 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=37.6
Q ss_pred HHHHhHHhcCCCCC--HHHHHHhc-CCCCCCce-----------eec---CCCeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAIT--LSELVSAL-DIQPTKTT-----------VNG---QEEAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t--~~elA~~~-~~~~~~l~-----------ve~---~~~~y~~t~~s~~L~ 63 (301)
++.|...|.+|+.+ +.||++.+ |+++..+. |++ ..-.|.+|+.++.|.
T Consensus 29 rl~IL~~L~~g~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~r~~~y~LT~~G~~l~ 93 (111)
T 3df8_A 29 TMLIISVLGNGSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSGQITTYALTEKGMNVR 93 (111)
T ss_dssp HHHHHHHHTSSSSCBCHHHHHHTSTTCCHHHHHHHHHHHHHTTSEEEEESSSEEEEECHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHccCCCHHHHHHHHHHHHHCCCEEEeecCcEEEEECccHHHHH
Confidence 66778888889988 99999999 89988877 222 245699999987544
No 353
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=66.44 E-value=5.2 Score=35.79 Aligned_cols=32 Identities=31% Similarity=0.371 Sum_probs=27.5
Q ss_pred CCeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 043533 150 LGSLVDVGGGNVSFSRI--ISEAFPGIKCTVLDL 181 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~--l~~~~P~~~~~~~Dl 181 (301)
.++|+=||+|.+.+..+ |.+..++++++++|-
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 57899999999987665 778889999999995
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=66.33 E-value=1.9 Score=38.20 Aligned_cols=88 Identities=22% Similarity=0.267 Sum_probs=56.6
Q ss_pred ccCCCeEEEecCC--ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCC--C----CCCC--CcchhHHH-
Q 043533 147 FEGLGSLVDVGGG--NVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGD--M----LRFI--PPANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG--~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D--~----~~~~--p~~D~i~~- 213 (301)
.....+||-+|+| .|..+..+++..++.+++++|. ++-.+.+++ +....+-..| + .+-. ..+|+++-
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 5667899999987 6677888888765679999997 555544433 1111111111 1 0001 13676654
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 248 ~g~~~~~~~~~~~l~~---~G~iv~~g~ 272 (347)
T 1jvb_A 248 NNSEKTLSVYPKALAK---QGKYVMVGL 272 (347)
T ss_dssp CCCHHHHTTGGGGEEE---EEEEEECCS
T ss_pred CCCHHHHHHHHHHHhc---CCEEEEECC
Confidence 588999999999 898887654
No 355
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=64.89 E-value=1.8 Score=29.56 Aligned_cols=30 Identities=17% Similarity=0.278 Sum_probs=23.6
Q ss_pred HHHHhHHhcC-C---CCCHHHHHHhcCCCCCCce
Q 043533 16 QAQLYKLIHG-R---AITLSELVSALDIQPTKTT 45 (301)
Q Consensus 16 ~l~lF~~L~~-~---p~t~~elA~~~~~~~~~l~ 45 (301)
+..|.+.|.+ + ++|+.|||+++|++...+.
T Consensus 16 ~~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~ 49 (77)
T 1qgp_A 16 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEIN 49 (77)
T ss_dssp HHHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHH
Confidence 3557777753 5 7999999999999987665
No 356
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=64.75 E-value=6.2 Score=34.30 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=50.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCC----CeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCcchhHHHHHHHHHHHh
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPG----IKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIPPANAFLFKILKKRREA 222 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~----~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p~~D~i~~~iL~~~~~a 222 (301)
.++..|+=||||.|....-|.+.+|+ ++.+++|- |. .......++|+.+.. ++++ -| +++.++.
T Consensus 59 ~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~-~~~l~~~~NV~li~~-fvde---~d------l~~l~~~ 127 (307)
T 3mag_A 59 LDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH-DPILNGLRDVTLVTR-FVDE---EY------LRSIKKQ 127 (307)
T ss_dssp STTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC-CGGGTTCTTEEEEEC-CCCH---HH------HHHHHHH
T ss_pred CCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc-hhhhcCCCcEEEEec-cCCH---HH------HHHHHHh
Confidence 34579999999999999999998886 69999997 32 222233567777664 4311 11 2444444
Q ss_pred cccCCCCcEEEEEeeeeC
Q 043533 223 IASNGERGKVIIIDIVIN 240 (301)
Q Consensus 223 L~p~~~gg~l~i~e~~~~ 240 (301)
+.. ...++|.|.-..
T Consensus 128 ~~~---~~iLLISDIRS~ 142 (307)
T 3mag_A 128 LHP---SKIILISDVRSK 142 (307)
T ss_dssp HTT---SCEEEEECCCC-
T ss_pred ccC---CCEEEEEEecCC
Confidence 444 456667766544
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=64.17 E-value=6.2 Score=35.06 Aligned_cols=88 Identities=14% Similarity=0.142 Sum_probs=57.6
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCC----CCc-chhHHH--
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRF----IPP-ANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~----~p~-~D~i~~-- 213 (301)
.....+||-+| ||.|..+..+++.. +.++++.|. ++-.+.+++ +....+-.. |+.+. .+. +|+++-
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 56678999999 78899999999987 669999997 554444433 111111111 11000 112 566554
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 --KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.++|++ +|+++++-..
T Consensus 240 g~~~~~~~~~~l~~---~G~iv~~g~~ 263 (362)
T 2c0c_A 240 GGAMFDLAVDALAT---KGRLIVIGFI 263 (362)
T ss_dssp CTHHHHHHHHHEEE---EEEEEECCCG
T ss_pred CHHHHHHHHHHHhc---CCEEEEEeCC
Confidence 788999999999 8998887653
No 358
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=62.94 E-value=9.4 Score=33.48 Aligned_cols=40 Identities=23% Similarity=0.266 Sum_probs=32.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANLP 189 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~ 189 (301)
.....|||-=||+|.++.+..+. +.+++++|+ |..++.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASA 291 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHH
Confidence 45679999999999999998887 578999999 66665554
No 359
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=62.92 E-value=6 Score=36.15 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=48.4
Q ss_pred CeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCcchhHHH--------
Q 043533 151 GSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRF-------IPPANAFLF-------- 213 (301)
Q Consensus 151 ~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~-------~p~~D~i~~-------- 213 (301)
.+|+=+|+|. |......+... +..++++|. |+.++.++. ..+.++.||..++ +..+|++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 4678787754 33333333333 678999999 887777663 4567788998763 223676655
Q ss_pred HHHHHHHHhcccCCCCcEEEE
Q 043533 214 KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i 234 (301)
..+....+.+.| ..++++
T Consensus 83 ~~i~~~ar~~~p---~~~Iia 100 (413)
T 3l9w_A 83 LQLTEMVKEHFP---HLQIIA 100 (413)
T ss_dssp HHHHHHHHHHCT---TCEEEE
T ss_pred HHHHHHHHHhCC---CCeEEE
Confidence 334444555667 455555
No 360
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=62.72 E-value=4.5 Score=29.38 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=23.2
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCC
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQ 40 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~ 40 (301)
++-.|.++|.++|+|+.|||+.+|+.
T Consensus 12 ~Re~Ii~lL~~~plta~ei~~~l~i~ 37 (105)
T 2gmg_A 12 RREKIIELLLEGDYSPSELARILDMR 37 (105)
T ss_dssp HHHHHHHHTTTSCBCTTHHHHSSCCC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHhCCC
Confidence 46678999999999999999999993
No 361
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=61.88 E-value=3.2 Score=28.67 Aligned_cols=30 Identities=17% Similarity=0.278 Sum_probs=23.4
Q ss_pred HHHHhHHhcC-C---CCCHHHHHHhcCCCCCCce
Q 043533 16 QAQLYKLIHG-R---AITLSELVSALDIQPTKTT 45 (301)
Q Consensus 16 ~l~lF~~L~~-~---p~t~~elA~~~~~~~~~l~ 45 (301)
+..|.+.|.+ + ++|+.|||+++|++...+.
T Consensus 12 ~~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~ 45 (81)
T 1qbj_A 12 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEIN 45 (81)
T ss_dssp HHHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHH
Confidence 4446677753 5 7999999999999987666
No 362
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=61.45 E-value=3.1 Score=30.12 Aligned_cols=30 Identities=13% Similarity=0.243 Sum_probs=26.7
Q ss_pred HHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 16 QAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
++.|...|.+++.|+.|||+.+|++...+.
T Consensus 27 r~~IL~~L~~~~~s~~eLa~~lgis~stvs 56 (108)
T 2kko_A 27 RLQILDLLAQGERAVEAIATATGMNLTTAS 56 (108)
T ss_dssp THHHHHHHTTCCEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHcCCcCHHHHHHHHCcCHHHHH
Confidence 677888888899999999999999988776
No 363
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=61.28 E-value=5 Score=35.77 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=55.0
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCC----CCCCC-----CcchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAGD----MLRFI-----PPANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~D----~~~~~-----p~~D~i~~ 213 (301)
.....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +....+-..+ +.+.+ ..+|+++-
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 56678899998754 78888999887 55 7999986 555544443 1111111111 11000 12566553
Q ss_pred -----HHHHHHHHhcccCCCC-cEEEEEee
Q 043533 214 -----KILKKRREAIASNGER-GKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~g-g~l~i~e~ 237 (301)
..++.+.+.|++ + |+++++-.
T Consensus 269 ~~g~~~~~~~~~~~l~~---~~G~iv~~G~ 295 (374)
T 1cdo_A 269 CVGNVGVMRNALESCLK---GWGVSVLVGW 295 (374)
T ss_dssp CSCCHHHHHHHHHTBCT---TTCEEEECSC
T ss_pred CCCCHHHHHHHHHHhhc---CCcEEEEEcC
Confidence 688999999999 9 99888754
No 364
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=60.06 E-value=6 Score=35.12 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=38.4
Q ss_pred CeEEEecCCccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCCCCC
Q 043533 151 GSLVDVGGGNVSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAGDMLR 203 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~ 203 (301)
.+|+|+-||.|.++..+.++.-+. .+..+|. +.+++..+. .+...++.+|+.+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~ 58 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEG 58 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGG
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHH
Confidence 479999999999999999985333 4788898 666665543 3344566777764
No 365
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=60.00 E-value=3.1 Score=36.45 Aligned_cols=85 Identities=13% Similarity=0.102 Sum_probs=55.3
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC--C--------C-CcchhH
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR--F--------I-PPANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~--~--------~-p~~D~i 211 (301)
.....+||-.|| |.|..+..+++.. +.+++++|. ++..+.+++ +....+ |..+ . . ..+|++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAF---NYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEE---ETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEE---ecCCHHHHHHHHHHHhCCCCeEE
Confidence 556789999996 7777888888775 569999997 554444432 111111 2221 0 0 125665
Q ss_pred HH----HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 212 LF----KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 212 ~~----~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
+- ..++.+.+.|++ ||+++++-..
T Consensus 219 i~~~g~~~~~~~~~~l~~---~G~~v~~g~~ 246 (333)
T 1v3u_A 219 FDNVGGEFLNTVLSQMKD---FGKIAICGAI 246 (333)
T ss_dssp EESSCHHHHHHHHTTEEE---EEEEEECCCC
T ss_pred EECCChHHHHHHHHHHhc---CCEEEEEecc
Confidence 54 678899999999 8999887643
No 366
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=59.97 E-value=11 Score=34.67 Aligned_cols=56 Identities=18% Similarity=0.291 Sum_probs=37.2
Q ss_pred CchHHHHHHHHhhcccccchHHHHHhhhhhcccCCCeEEEecCCccHHHHHHHHHC----C-CCeEEEeec
Q 043533 116 NPAINQRFNEAMASDSEIMTSFVVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAF----P-GIKCTVLDL 181 (301)
Q Consensus 116 ~~~~~~~f~~am~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~----P-~~~~~~~Dl 181 (301)
.|+....|.+.... +++ +.+. -.+.-+|+++|+|+|.++..+++.. + ..++.+++.
T Consensus 114 APeiS~~FGe~la~-------~~~-~~~~--~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 114 APELSPLFAQTLAR-------PVA-QALD--ASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp CGGGHHHHHHHHHH-------HHH-HHHH--HHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred chhhhHHHHHHHHH-------HHH-HHHH--hcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 56666666665542 234 3333 2235699999999999999988643 1 237888887
No 367
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=59.14 E-value=0.55 Score=41.84 Aligned_cols=88 Identities=11% Similarity=0.113 Sum_probs=57.5
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEe---CCCCCC----CC--cchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIA---GDMLRF----IP--PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~---~D~~~~----~p--~~D~i~~ 213 (301)
.....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +.. .++. .|+.+. .+ .+|+++-
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGAT-DIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCC-EEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCc-eEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 56678888888765 78888888876 55 7999998 555555554 111 1111 121110 11 2676654
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
..++.+.+.|+| ||+++++-...
T Consensus 242 ~~g~~~~~~~~~~~l~~---~G~~v~~G~~~ 269 (352)
T 3fpc_A 242 AGGDVHTFAQAVKMIKP---GSDIGNVNYLG 269 (352)
T ss_dssp CSSCTTHHHHHHHHEEE---EEEEEECCCCC
T ss_pred CCCChHHHHHHHHHHhc---CCEEEEecccC
Confidence 689999999999 89998876543
No 368
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=58.73 E-value=5 Score=29.71 Aligned_cols=31 Identities=6% Similarity=0.253 Sum_probs=27.2
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|+..|. +++.|+.|||+.+|++...+.
T Consensus 43 ~rl~IL~~L~~~~~~s~~eLa~~l~is~stvs 74 (122)
T 1u2w_A 43 NRAKITYALCQDEELCVCDIANILGVTIANAS 74 (122)
T ss_dssp HHHHHHHHHHHSSCEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHCCCcCHHHHHHHHCcCHHHHH
Confidence 3778899997 789999999999999888776
No 369
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=58.47 E-value=4 Score=35.73 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=56.7
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCC----C-Cc-chhHHH-
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRF----I-PP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~----~-p~-~D~i~~- 213 (301)
+....+||-+| ||.|..+..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+. . +. +|+++-
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 56678999998 57788888898876 569999998 655555443 111111111 11110 0 11 566554
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ ||+++++-.
T Consensus 225 ~g~~~~~~~~~~l~~---~G~iv~~G~ 248 (334)
T 3qwb_A 225 VGKDTFEISLAALKR---KGVFVSFGN 248 (334)
T ss_dssp CGGGGHHHHHHHEEE---EEEEEECCC
T ss_pred CChHHHHHHHHHhcc---CCEEEEEcC
Confidence 778889999999 899888754
No 370
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=58.39 E-value=5.6 Score=28.60 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=27.3
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|.++|.|+.|||+.++++...+.
T Consensus 22 ~r~~IL~~L~~~~~~~~ela~~l~is~~tv~ 52 (114)
T 2oqg_A 22 TRWEILTELGRADQSASSLATRLPVSRQAIA 52 (114)
T ss_dssp HHHHHHHHHHHSCBCHHHHHHHSSSCHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 4788888887799999999999999888776
No 371
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=57.86 E-value=4.9 Score=29.57 Aligned_cols=31 Identities=6% Similarity=0.146 Sum_probs=27.8
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|.+++.++.|||+.+|++...+.
T Consensus 22 ~r~~IL~~L~~~~~~~~eLa~~lgis~stvs 52 (118)
T 2jsc_A 22 TRCRILVALLDGVCYPGQLAAHLGLTRSNVS 52 (118)
T ss_dssp HHHHHHHHHHTTCCSTTTHHHHHSSCHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 4788999998899999999999999888776
No 372
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=57.51 E-value=6.5 Score=35.02 Aligned_cols=86 Identities=10% Similarity=0.065 Sum_probs=55.0
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEe-C----CCCCC----CC-cchhHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIA-G----DMLRF----IP-PANAFL 212 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~-~----D~~~~----~p-~~D~i~ 212 (301)
+....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +.. .++. . |+.+. .+ .+|+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGAT-ECVNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCS-EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCc-eEecccccchhHHHHHHHHhCCCCcEEE
Confidence 56678899998765 78888899887 55 7999986 555444443 111 1111 1 11100 01 256655
Q ss_pred H-----HHHHHHHHhcccCCCC-cEEEEEee
Q 043533 213 F-----KILKKRREAIASNGER-GKVIIIDI 237 (301)
Q Consensus 213 ~-----~iL~~~~~aL~p~~~g-g~l~i~e~ 237 (301)
- ..++.+.+.|++ + |+++++-.
T Consensus 267 d~~g~~~~~~~~~~~l~~---~~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIGRLDTMVTALSCCQE---AYGVSVIVGV 294 (374)
T ss_dssp ECSCCHHHHHHHHHHBCT---TTCEEEECSC
T ss_pred ECCCCHHHHHHHHHHhhc---CCcEEEEecc
Confidence 4 688999999999 8 99887754
No 373
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=57.43 E-value=1.7 Score=37.81 Aligned_cols=84 Identities=11% Similarity=0.083 Sum_probs=52.9
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCc-chhHHH----HHHHHHH
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMLRFIPP-ANAFLF----KILKKRR 220 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~~~~p~-~D~i~~----~iL~~~~ 220 (301)
.....+||-+|+| .|.++..+++.. +.++++++.++-.+.+++. ....+..| .+.++. +|+++- ..+..+.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~l-Ga~~v~~d-~~~v~~g~Dvv~d~~g~~~~~~~~ 216 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVSASLSQALAAKR-GVRHLYRE-PSQVTQKYFAIFDAVNSQNAAALV 216 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSCCHHHHHHH-TEEEEESS-GGGCCSCEEEEECC-------TTG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEEChhhHHHHHHc-CCCEEEcC-HHHhCCCccEEEECCCchhHHHHH
Confidence 5667899999875 488899999876 5699988854444444331 11211125 334443 676664 5557788
Q ss_pred HhcccCCCCcEEEEEe
Q 043533 221 EAIASNGERGKVIIID 236 (301)
Q Consensus 221 ~aL~p~~~gg~l~i~e 236 (301)
+.|++ +|+++++-
T Consensus 217 ~~l~~---~G~~v~~g 229 (315)
T 3goh_A 217 PSLKA---NGHIICIQ 229 (315)
T ss_dssp GGEEE---EEEEEEEC
T ss_pred HHhcC---CCEEEEEe
Confidence 99999 89998884
No 374
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=57.35 E-value=10 Score=33.10 Aligned_cols=84 Identities=8% Similarity=0.065 Sum_probs=56.0
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCC-C-CCCeEEEeCCCCC--CC--------C-cchh
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLP-E-ADNLKYIAGDMLR--FI--------P-PANA 210 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~-~-~~ri~~~~~D~~~--~~--------p-~~D~ 210 (301)
+....+||-+|+ |.|..+..+++.. +.++++.|. ++-.+.++ + +....+ |..+ .+ + .+|+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAF---NYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEE---ETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEE---ecCCHHHHHHHHHHHhCCCCcE
Confidence 566789999995 7788888888876 569999997 55544443 2 211111 2211 11 1 2566
Q ss_pred HHH----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 211 FLF----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 211 i~~----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
++- ..++.+.+.|++ ||+++++-.
T Consensus 229 vi~~~g~~~~~~~~~~l~~---~G~~v~~G~ 256 (345)
T 2j3h_A 229 YFENVGGKMLDAVLVNMNM---HGRIAVCGM 256 (345)
T ss_dssp EEESSCHHHHHHHHTTEEE---EEEEEECCC
T ss_pred EEECCCHHHHHHHHHHHhc---CCEEEEEcc
Confidence 554 788999999999 899888754
No 375
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=57.32 E-value=6 Score=34.37 Aligned_cols=82 Identities=17% Similarity=0.135 Sum_probs=52.9
Q ss_pred eEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCC--CCCC-C-cchhHHH----HHHHHH
Q 043533 152 SLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDM--LRFI-P-PANAFLF----KILKKR 219 (301)
Q Consensus 152 ~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~--~~~~-p-~~D~i~~----~iL~~~ 219 (301)
+||-+| ||.|.++..+++.. +.+++++|. ++-.+.+++ +....+-..|. ...+ + .+|+++- ..++.+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~ 227 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKV 227 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHH
Confidence 488888 47888999999987 569999986 555554443 11111111121 1111 1 2565543 789999
Q ss_pred HHhcccCCCCcEEEEEee
Q 043533 220 REAIASNGERGKVIIIDI 237 (301)
Q Consensus 220 ~~aL~p~~~gg~l~i~e~ 237 (301)
.+.|++ +|+++++-.
T Consensus 228 ~~~l~~---~G~iv~~G~ 242 (324)
T 3nx4_A 228 LAQMNY---GGCVAACGL 242 (324)
T ss_dssp HHTEEE---EEEEEECCC
T ss_pred HHHHhc---CCEEEEEec
Confidence 999999 899988754
No 376
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=57.01 E-value=4.3 Score=28.81 Aligned_cols=31 Identities=6% Similarity=0.273 Sum_probs=25.7
Q ss_pred HHHHHhHH-hcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKL-IHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~-L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|+.. +.+++.|+.|||+.+|++...+.
T Consensus 28 ~Rl~IL~~l~~~~~~~~~ela~~l~is~stvs 59 (99)
T 2zkz_A 28 MRLKIVNELYKHKALNVTQIIQILKLPQSTVS 59 (99)
T ss_dssp HHHHHHHHHHHHSCEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHCCCcCHHHHHHHHCcCHHHHH
Confidence 48889954 45689999999999999887665
No 377
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=56.18 E-value=6.8 Score=34.92 Aligned_cols=87 Identities=11% Similarity=0.029 Sum_probs=55.0
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeC----CCCCCC----C-cchhHHH
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAG----DMLRFI----P-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~----D~~~~~----p-~~D~i~~ 213 (301)
.....+||-+|+| .|.++..+++.. +. +++++|. ++-.+.+++ +....+-.. |+.+.+ + .+|+++-
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEE
Confidence 5567889999875 478888999887 55 7999986 554444443 111111111 111100 1 2566553
Q ss_pred -----HHHHHHHHhcccCCCC-cEEEEEee
Q 043533 214 -----KILKKRREAIASNGER-GKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~g-g~l~i~e~ 237 (301)
..++.+.+.|++ + |+++++-.
T Consensus 272 ~~G~~~~~~~~~~~l~~---~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CAGTAQTLKAAVDCTVL---GWGSCTVVGA 298 (376)
T ss_dssp SSCCHHHHHHHHHTBCT---TTCEEEECCC
T ss_pred CCCCHHHHHHHHHHhhc---CCCEEEEECC
Confidence 788999999999 9 99888764
No 378
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=55.97 E-value=2.7 Score=30.65 Aligned_cols=48 Identities=25% Similarity=0.230 Sum_probs=34.5
Q ss_pred HHHHhHHhcCCCCCHHHHHHhc-CCCCCCce-----------e--e--cCC---CeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSAL-DIQPTKTT-----------V--N--GQE---EAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~-~~~~~~l~-----------v--e--~~~---~~y~~t~~s~~L~ 63 (301)
++.|...|.+++.+..|||+.+ +++...+. | + ..+ -.|.+|+.++.+.
T Consensus 24 ~~~IL~~L~~~~~~~~eLa~~l~~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~~~LT~~G~~~~ 90 (112)
T 1z7u_A 24 KLSLMDELFQGTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYALY 90 (112)
T ss_dssp HHHHHHHHHHSCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHhccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECHhHHHHH
Confidence 4456666666899999999999 99888776 2 1 111 2399999987443
No 379
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=55.95 E-value=5.2 Score=31.05 Aligned_cols=31 Identities=13% Similarity=0.238 Sum_probs=28.0
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
+++.|...|.++|+|+.|||+.++++...+.
T Consensus 59 ~R~~IL~~L~~~~~t~~eLa~~lgls~stvs 89 (151)
T 3f6v_A 59 TRRRLVQLLTSGEQTVNNLAAHFPASRSAIS 89 (151)
T ss_dssp HHHHHHHHGGGCCEEHHHHHTTSSSCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHCcCHHHHH
Confidence 5899999999899999999999999887766
No 380
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=55.89 E-value=6.1 Score=29.33 Aligned_cols=49 Identities=12% Similarity=0.086 Sum_probs=36.0
Q ss_pred HHHHHhHHhcC-CCCCHHHHHHhcCCCCCCce-----------e--e--c---CCCeEEcChhcchhh
Q 043533 15 GQAQLYKLIHG-RAITLSELVSALDIQPTKTT-----------V--N--G---QEEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~elA~~~~~~~~~l~-----------v--e--~---~~~~y~~t~~s~~L~ 63 (301)
.++.++..|.. +++|..+||+.++++...+. | . . ..-.|.+|+.++.+.
T Consensus 32 ~~~~iL~~l~~~~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 32 TRYSILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 46677888864 78999999999999888776 2 1 1 123488888887554
No 381
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=55.65 E-value=9.8 Score=29.52 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 10 KELFQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 10 ~~~~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.+.+..+-.+.+.|.+|++|..+||+++|++-....
T Consensus 7 d~v~erk~~ILE~Lk~G~~~t~~Iak~LGlShg~aq 42 (165)
T 2vxz_A 7 REVLVRLRDILALLADGCKTTSLIQQRLGLSHGRAK 42 (165)
T ss_dssp HHHHHHHHHHHHHHTTCCEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCccHHHHHHHhCCcHHHHH
Confidence 567778889999999999999999999999887776
No 382
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=55.26 E-value=4.4 Score=31.14 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=35.0
Q ss_pred HHHHhHHhcCCCCCHHHHHHhcCCCCCCce-----------e--ecC----CCeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSALDIQPTKTT-----------V--NGQ----EEAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~~~~~~~l~-----------v--e~~----~~~y~~t~~s~~L~ 63 (301)
++.|...|.+|+.++.|||+.++++...+. | ... .-.|.+|+.++.|.
T Consensus 26 ~l~IL~~L~~g~~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 26 SMLIVRDAFEGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALF 90 (146)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTH
T ss_pred HHHHHHHHHhCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEECchHHHHH
Confidence 445666666799999999999999988776 2 111 23699999886443
No 383
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=55.08 E-value=5.7 Score=35.35 Aligned_cols=87 Identities=14% Similarity=0.096 Sum_probs=54.8
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCC----CCCC----CC-cchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAGD----MLRF----IP-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~D----~~~~----~p-~~D~i~~ 213 (301)
.....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +....+-..+ +.+. .+ .+|+++-
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 56678899998754 77888888876 45 7999986 555544443 1111111111 1100 01 2566554
Q ss_pred -----HHHHHHHHhcccCCCC-cEEEEEee
Q 043533 214 -----KILKKRREAIASNGER-GKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~g-g~l~i~e~ 237 (301)
..++.+.+.|++ + |+++++-.
T Consensus 267 ~~g~~~~~~~~~~~l~~---~~G~iv~~G~ 293 (373)
T 2fzw_A 267 CIGNVKVMRAALEACHK---GWGVSVVVGV 293 (373)
T ss_dssp CSCCHHHHHHHHHTBCT---TTCEEEECSC
T ss_pred CCCcHHHHHHHHHhhcc---CCcEEEEEec
Confidence 688999999999 9 99888764
No 384
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=54.83 E-value=36 Score=29.54 Aligned_cols=91 Identities=9% Similarity=0.076 Sum_probs=55.8
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCC--CCC---CC---CcchhHHH--
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGD--MLR---FI---PPANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D--~~~---~~---p~~D~i~~-- 213 (301)
.....+||=.|+| .|.++..+++..-.-.++++|. ++-.+.+++ +....+-..+ ..+ .+ ..+|+++-
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 5567788888875 4667778888875556788897 665665554 2121221111 100 01 11444442
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeeeeC
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIVIN 240 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~~~ 240 (301)
..++.+.+.+++ ||+++++-....
T Consensus 238 G~~~~~~~~~~~l~~---~G~~v~~g~~~~ 264 (346)
T 4a2c_A 238 GVPQTVELAVEIAGP---HAQLALVGTLHQ 264 (346)
T ss_dssp CSHHHHHHHHHHCCT---TCEEEECCCCSS
T ss_pred cccchhhhhhheecC---CeEEEEEeccCC
Confidence 788999999999 899888765443
No 385
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=54.73 E-value=5.8 Score=35.32 Aligned_cols=87 Identities=7% Similarity=-0.007 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeC----CCCCC----CC-cchhHHH
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAG----DMLRF----IP-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~----D~~~~----~p-~~D~i~~ 213 (301)
+....+||-+|+|. |.++..+++.. +. +++++|. ++-.+.+++ +....+-.. |+.+. .+ .+|+++-
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 56678899998764 78888899876 45 7899986 554444443 111111111 11110 11 2566654
Q ss_pred -----HHHHHHHHhcccCCCC-cEEEEEee
Q 043533 214 -----KILKKRREAIASNGER-GKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~g-g~l~i~e~ 237 (301)
..++.+.+.|++ + |+++++-.
T Consensus 268 ~~g~~~~~~~~~~~l~~---~~G~iv~~G~ 294 (373)
T 1p0f_A 268 CAGRIETMMNALQSTYC---GSGVTVVLGL 294 (373)
T ss_dssp CSCCHHHHHHHHHTBCT---TTCEEEECCC
T ss_pred CCCCHHHHHHHHHHHhc---CCCEEEEEcc
Confidence 688999999999 8 99887764
No 386
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=54.72 E-value=7.3 Score=27.04 Aligned_cols=31 Identities=13% Similarity=0.258 Sum_probs=26.6
Q ss_pred HHHHHhHHhcCC-CCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGR-AITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~-p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|+..|.++ +.|..|||+.++++...+.
T Consensus 25 ~~~~il~~l~~~~~~s~~ela~~l~is~~tvs 56 (99)
T 3cuo_A 25 KRLLILCMLSGSPGTSAGELTRITGLSASATS 56 (99)
T ss_dssp HHHHHHHHHTTCCSEEHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHhCCCcCHHHHHHHHCcCHHHHH
Confidence 477888888765 8999999999999887766
No 387
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=54.29 E-value=17 Score=31.78 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=33.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEeec-h---HHHhcCC
Q 043533 148 EGLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-P---HAVANLP 189 (301)
Q Consensus 148 ~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p---~~~~~a~ 189 (301)
.....|||-=||+|..+.+..+. +.+++++|+ | ..++.+.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHH
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHH
Confidence 45679999999999999999988 578999999 6 5665544
No 388
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=53.57 E-value=3.3 Score=29.87 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=34.8
Q ss_pred HHHHhHHhcCCCCCHHHHHHhcC-CCCCCce-----------e----ecCC---CeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSALD-IQPTKTT-----------V----NGQE---EAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~~-~~~~~l~-----------v----e~~~---~~y~~t~~s~~L~ 63 (301)
++.|...|.+++.++.|||+.++ ++...+. | ...+ -.|.+|+.++.+.
T Consensus 27 ~~~IL~~L~~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~ 93 (107)
T 2fsw_A 27 TLLIIFQINRRIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVL 93 (107)
T ss_dssp HHHHHHHHTTSCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHTTH
T ss_pred HHHHHHHHHhCCcCHHHHHHHcccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeeEEEECccHHHHH
Confidence 45566777789999999999994 9888776 2 1111 3499999986443
No 389
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=53.56 E-value=5.6 Score=35.33 Aligned_cols=87 Identities=18% Similarity=0.177 Sum_probs=56.4
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCC---CCCC----CC--cchhHHH-
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGD---MLRF----IP--PANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D---~~~~----~p--~~D~i~~- 213 (301)
+....+||-+|+|. |.++..+++.. +.+++++|. ++-.+.+++ +... ++..+ +.+. .+ .+|+++-
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADH-GINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 56678999998765 78888888876 569999997 555555543 2111 11111 1110 01 2565553
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.+.|++ +|+++++-..
T Consensus 265 ~g~~~~~~~~~~l~~---~G~iv~~G~~ 289 (363)
T 3uog_A 265 AGGAGLGQSLKAVAP---DGRISVIGVL 289 (363)
T ss_dssp TTSSCHHHHHHHEEE---EEEEEEECCC
T ss_pred CChHHHHHHHHHhhc---CCEEEEEecC
Confidence 678888999999 8999988654
No 390
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=53.29 E-value=25 Score=28.75 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=48.3
Q ss_pred CCeEEEecCCccHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCcchhHHH------
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFP--GIKCTVLDL-PHAVANLPEADNLKYIAGDMLRF-------IPPANAFLF------ 213 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P--~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~-------~p~~D~i~~------ 213 (301)
..+|+=+|+ |.++..+++..- +. ++++|. ++.++.+. .++.++.||..++ +..+|++++
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 457888877 677777777643 34 888888 66665554 4588999998752 233676655
Q ss_pred --HHHHHHHHhcccCCCCcEEEE
Q 043533 214 --KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i 234 (301)
.......+.+.| +.+++.
T Consensus 84 ~n~~~~~~a~~~~~---~~~iia 103 (234)
T 2aef_A 84 ETIHCILGIRKIDE---SVRIIA 103 (234)
T ss_dssp HHHHHHHHHHHHCS---SSEEEE
T ss_pred HHHHHHHHHHHHCC---CCeEEE
Confidence 333444555677 445544
No 391
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=53.09 E-value=8.1 Score=28.12 Aligned_cols=31 Identities=6% Similarity=0.315 Sum_probs=27.0
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|.+++.|+.+||+.++++...+.
T Consensus 33 ~~~~il~~L~~~~~s~~ela~~l~is~stvs 63 (119)
T 2lkp_A 33 SRLMILTQLRNGPLPVTDLAEAIGMEQSAVS 63 (119)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHHHSSCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCcCHHHHH
Confidence 3788888888789999999999999888776
No 392
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=52.92 E-value=8.1 Score=33.69 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=39.2
Q ss_pred eEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHHhcCCCCCCeEEEeCCCCC----CCCcchhHHH
Q 043533 152 SLVDVGGGNVSFSRIISEAFPGIK-CTVLDL-PHAVANLPEADNLKYIAGDMLR----FIPPANAFLF 213 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~P~~~-~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~----~~p~~D~i~~ 213 (301)
+|+|+=||.|.+...+.++. .+ +..+|+ +..++.-+..-.-.++.+|+.+ .+|..|+++.
T Consensus 2 kvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEe
Confidence 68999999999999998874 45 447787 5444433321112556778764 2555777665
No 393
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=52.80 E-value=9.5 Score=32.32 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=39.8
Q ss_pred eEEEecCCc-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC-cchhHHH--------HHHHHH
Q 043533 152 SLVDVGGGN-VS-FSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRFIP-PANAFLF--------KILKKR 219 (301)
Q Consensus 152 ~vlDvGgG~-G~-~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p-~~D~i~~--------~iL~~~ 219 (301)
+|.=||+|. |. ++..+++.....+++++|. ++.++.+.+..-......|..+... .+|+|++ .+++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l 82 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKL 82 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHHHH
Confidence 577788764 32 3333444332347999998 5555444321111111223322344 5677766 677778
Q ss_pred HHhccc
Q 043533 220 REAIAS 225 (301)
Q Consensus 220 ~~aL~p 225 (301)
...+++
T Consensus 83 ~~~l~~ 88 (281)
T 2g5c_A 83 SYILSE 88 (281)
T ss_dssp HHHSCT
T ss_pred HhhCCC
Confidence 778888
No 394
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=52.55 E-value=11 Score=32.78 Aligned_cols=88 Identities=15% Similarity=0.097 Sum_probs=57.2
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcC-CC-CCCeEEEeCC--CCCC----CCc-chhHHH-
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANL-PE-ADNLKYIAGD--MLRF----IPP-ANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a-~~-~~ri~~~~~D--~~~~----~p~-~D~i~~- 213 (301)
+....+||-+|+ |.|..+..+++.. +.+++++|. ++-.+.+ ++ +....+-..+ +.+. .+. +|+++-
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 666789999997 6788888888876 569999997 6555554 33 1111111111 1100 122 566554
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.+.|++ +|+++++-..
T Consensus 226 ~g~~~~~~~~~~l~~---~G~iv~~G~~ 250 (336)
T 4b7c_A 226 VGGEILDTVLTRIAF---KARIVLCGAI 250 (336)
T ss_dssp SCHHHHHHHHTTEEE---EEEEEECCCG
T ss_pred CCcchHHHHHHHHhh---CCEEEEEeec
Confidence 788999999999 8998887643
No 395
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=52.40 E-value=19 Score=31.39 Aligned_cols=83 Identities=18% Similarity=0.161 Sum_probs=55.8
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CC--------C-cchhHHH
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGI-KCTVLDL-PHAVANLPEADNLKYIAGDMLR-FI--------P-PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~--------p-~~D~i~~ 213 (301)
+ ...+||-+|+| .|.++..+++.. +. +++++|. ++-.+.+++. --.++ |..+ ++ + .+|+++-
T Consensus 163 ~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~--~~~~~~~~~~~~~~~~~g~D~vid 237 (343)
T 2dq4_A 163 V-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLV--NPLEEDLLEVVRRVTGSGVEVLLE 237 (343)
T ss_dssp C-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEE--CTTTSCHHHHHHHHHSSCEEEEEE
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhcc--CcCccCHHHHHHHhcCCCCCEEEE
Confidence 5 67889999964 478888899886 56 8999997 6666666542 11112 2211 10 2 2566554
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 238 ~~g~~~~~~~~~~~l~~---~G~iv~~g~ 263 (343)
T 2dq4_A 238 FSGNEAAIHQGLMALIP---GGEARILGI 263 (343)
T ss_dssp CSCCHHHHHHHHHHEEE---EEEEEECCC
T ss_pred CCCCHHHHHHHHHHHhc---CCEEEEEec
Confidence 788999999999 898887754
No 396
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=51.51 E-value=10 Score=26.20 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=26.6
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.....|-+.|...+.|+.|||+++|++...++
T Consensus 17 ~~~~~IL~lL~~~g~sa~eLAk~LgiSk~aVr 48 (82)
T 1oyi_A 17 EIVCEAIKTIGIEGATAAQLTRQLNMEKREVN 48 (82)
T ss_dssp HHHHHHHHHHSSSTEEHHHHHHHSSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHH
Confidence 45667778887656999999999999988776
No 397
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=51.10 E-value=3.6 Score=36.33 Aligned_cols=86 Identities=10% Similarity=0.180 Sum_probs=54.5
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCC--CCCC----CC--cchhHHH-
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGD--MLRF----IP--PANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D--~~~~----~p--~~D~i~~- 213 (301)
+....+||-+|+ |.|..+..+++.. +.++++++. ++-.+.+++ +... ++..+ +.+. .+ .+|+++-
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~-v~~~~~~~~~~v~~~~~~~g~Dvvid~ 234 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADI-VLPLEEGWAKAVREATGGAGVDMVVDP 234 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSE-EEESSTTHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcE-EecCchhHHHHHHHHhCCCCceEEEEC
Confidence 566789999985 6788999999886 569999988 554444443 1111 11111 1110 11 2566553
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 235 ~g~~~~~~~~~~l~~---~G~iv~~G~ 258 (342)
T 4eye_A 235 IGGPAFDDAVRTLAS---EGRLLVVGF 258 (342)
T ss_dssp CC--CHHHHHHTEEE---EEEEEEC--
T ss_pred CchhHHHHHHHhhcC---CCEEEEEEc
Confidence 678889999999 899988764
No 398
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=50.91 E-value=4.8 Score=35.36 Aligned_cols=88 Identities=9% Similarity=0.041 Sum_probs=53.9
Q ss_pred ccCCCeEEEecCC--ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCC----CC--cchhHHH-
Q 043533 147 FEGLGSLVDVGGG--NVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRF----IP--PANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG--~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~----~p--~~D~i~~- 213 (301)
+....+||-+|+| .|..+..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+. .. .+|+++-
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 6667899999876 688888888876 569999987 444444333 212112111 11110 11 2666653
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..+.+..+.|++ +|+++++-..
T Consensus 221 ~g~~~~~~~~~~l~~---~G~iv~~G~~ 245 (340)
T 3gms_A 221 IGGPDGNELAFSLRP---NGHFLTIGLL 245 (340)
T ss_dssp SCHHHHHHHHHTEEE---EEEEEECCCT
T ss_pred CCChhHHHHHHHhcC---CCEEEEEeec
Confidence 444556689999 8999887653
No 399
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=50.71 E-value=7.2 Score=30.77 Aligned_cols=44 Identities=25% Similarity=0.282 Sum_probs=33.5
Q ss_pred EEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEE
Q 043533 153 LVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKY 196 (301)
Q Consensus 153 vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~ 196 (301)
.-=+.||||.=..-.++++|+++.-.+--+.....++++++.++
T Consensus 64 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNV 107 (162)
T 2vvp_A 64 LGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQL 107 (162)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSE
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcE
Confidence 33457999998899999999999888777777777776444333
No 400
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=50.61 E-value=7.4 Score=33.35 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=33.0
Q ss_pred HHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------eec-CCCeEEcChhcc
Q 043533 15 GQAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VNG-QEEAYGLTAAST 60 (301)
Q Consensus 15 ~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve~-~~~~y~~t~~s~ 60 (301)
--+.|.+.|.+ +++|+.|||+++|++...+. |+. .+++|.+++..-
T Consensus 31 Ral~IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~~~~Y~LG~~~~ 90 (275)
T 3mq0_A 31 RAVRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSADGTLRIGPHSL 90 (275)
T ss_dssp HHHHHHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECTTSEEEECTHHH
T ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCCCcEEehHHHH
Confidence 35677888853 57999999999999988876 232 347899988643
No 401
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=50.37 E-value=14 Score=32.24 Aligned_cols=85 Identities=12% Similarity=0.127 Sum_probs=55.8
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CC--------CcchhHHH--
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR-FI--------PPANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~-~~--------p~~D~i~~-- 213 (301)
.....+||-+|+| .|..+..+++.. +.+++++|. ++-.+.+++.. ...+ .|..+ ++ ..+|+++-
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lG-a~~~-~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELG-ADLV-VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTT-CSEE-ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCC-CCEE-ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 5667899999864 688888999886 569999996 55555444311 1111 13221 11 12565553
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++++-.
T Consensus 239 g~~~~~~~~~~~l~~---~G~~v~~g~ 262 (339)
T 1rjw_A 239 VSKPAFQSAYNSIRR---GGACVLVGL 262 (339)
T ss_dssp CCHHHHHHHHHHEEE---EEEEEECCC
T ss_pred CCHHHHHHHHHHhhc---CCEEEEecc
Confidence 788999999999 898887754
No 402
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=50.14 E-value=9.7 Score=25.71 Aligned_cols=29 Identities=10% Similarity=0.248 Sum_probs=24.0
Q ss_pred HHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 17 AQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 17 l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
..|.+.|. .+++|..|||+.+|++...++
T Consensus 3 ~~Il~~L~~~~~~s~~eLa~~lgvs~~tv~ 32 (81)
T 2htj_A 3 NEILEFLNRHNGGKTAEIAEALAVTDYQAR 32 (81)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 45677775 488999999999999888776
No 403
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=50.14 E-value=5.8 Score=33.52 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=38.1
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce-----------e--ecCCCeEEcChhcchhh
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT-----------V--NGQEEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~-----------v--e~~~~~y~~t~~s~~L~ 63 (301)
.++.+...|. ++++|..|||++++++...+. | ......|.+|+.+..+.
T Consensus 153 ~~~~IL~~L~~~~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~r~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 153 EEMKLLNVLYETKGTGITELAKMLDKSEKTLINKIAELKKFGILTQKGKDRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHHHTCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTTEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCCccEEEECHHHHHHH
Confidence 4667777774 588999999999999988776 2 23467799999987554
No 404
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=49.52 E-value=6.7 Score=35.10 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=56.2
Q ss_pred ccCCCeEEEecC-CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC------CCCCC----CC--cchhH
Q 043533 147 FEGLGSLVDVGG-GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG------DMLRF----IP--PANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGg-G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~------D~~~~----~p--~~D~i 211 (301)
+....+||-+|+ |.|.++..+++..-..+++++|. ++-.+.+++ +.. .++.. |+.+. .+ .+|++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc-EEEeccccCcchHHHHHHHHhCCCCCcEE
Confidence 445678999984 45888899999873359999996 655555543 111 11211 11110 11 26666
Q ss_pred HH-----HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 212 LF-----KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 212 ~~-----~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
+- ..++.+.+.|++ +|+++++-..
T Consensus 272 id~~g~~~~~~~~~~~l~~---~G~iv~~G~~ 300 (380)
T 1vj0_A 272 LEATGDSRALLEGSELLRR---GGFYSVAGVA 300 (380)
T ss_dssp EECSSCTTHHHHHHHHEEE---EEEEEECCCC
T ss_pred EECCCCHHHHHHHHHHHhc---CCEEEEEecC
Confidence 54 688999999999 8998887543
No 405
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=49.44 E-value=7.6 Score=30.16 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=33.1
Q ss_pred EecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEE
Q 043533 155 DVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYI 197 (301)
Q Consensus 155 DvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~ 197 (301)
=+.||||.=..-.++++|+++.-.+--+.....+++.++.+++
T Consensus 62 IliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVl 104 (149)
T 3he8_A 62 IVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANIL 104 (149)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCSEE
T ss_pred EEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEE
Confidence 3568999888889999999998888777777777765443333
No 406
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=49.43 E-value=9.3 Score=34.33 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=52.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEeec--h-HHHh-cCC----CCCCeEEEeCCCCCCCCc-chhHHH------
Q 043533 149 GLGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL--P-HAVA-NLP----EADNLKYIAGDMLRFIPP-ANAFLF------ 213 (301)
Q Consensus 149 ~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl--p-~~~~-~a~----~~~ri~~~~~D~~~~~p~-~D~i~~------ 213 (301)
...+||.|+.+.|.++..++...| . .+-|. . ..+. .+. ..+++++.. ..++.+. +|++++
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~--~-~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~lpk~~ 112 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP--Y-SIGDSYISELATRENLRLNGIDESSVKFLD--STADYPQQPGVVLIKVPKTL 112 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC--E-EEESCHHHHHHHHHHHHHTTCCGGGSEEEE--TTSCCCSSCSEEEEECCSCH
T ss_pred CCCCEEEECCCCCHHHHhhccCCc--e-EEEhHHHHHHHHHHHHHHcCCCccceEecc--cccccccCCCEEEEEcCCCH
Confidence 346899999999999999986543 2 23464 1 1111 111 123466653 3345554 887776
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..|+.+...|+| |+.+++...
T Consensus 113 ~~l~~~L~~l~~~l~~---~~~i~~~g~ 137 (375)
T 4dcm_A 113 ALLEQQLRALRKVVTS---DTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHHHHTTCCT---TSEEEEEEE
T ss_pred HHHHHHHHHHHhhCCC---CCEEEEEec
Confidence 788888888998 788876654
No 407
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=48.91 E-value=8.3 Score=30.49 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=33.6
Q ss_pred EEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEE
Q 043533 154 VDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYI 197 (301)
Q Consensus 154 lDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~ 197 (301)
-=+.||||.=..-.++++|+++.-.+--+.....+++.++.+++
T Consensus 82 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL 125 (166)
T 3s5p_A 82 CILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANAL 125 (166)
T ss_dssp EEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEE
Confidence 33568999988889999999998888777777777764444333
No 408
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=48.84 E-value=4.4 Score=35.08 Aligned_cols=19 Identities=11% Similarity=0.468 Sum_probs=16.1
Q ss_pred HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
.++++++++|+| ||.+++.
T Consensus 78 ~~~~~~~rvLk~---~G~l~i~ 96 (297)
T 2zig_A 78 RVWREVFRLLVP---GGRLVIV 96 (297)
T ss_dssp HHHHHHHHHEEE---EEEEEEE
T ss_pred HHHHHHHHHcCC---CcEEEEE
Confidence 789999999999 7877664
No 409
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.76 E-value=16 Score=26.64 Aligned_cols=51 Identities=12% Similarity=0.166 Sum_probs=29.8
Q ss_pred CeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC
Q 043533 151 GSLVDVGGGNVSFSRIISEAF--PGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR 203 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~--P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~ 203 (301)
.+|+=+|+ |..+..+++.. .+.+++++|. ++.++.+.+..++.++.+|..+
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~ 58 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTK 58 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTS
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCC
Confidence 46787876 45544444321 2568999998 5555444322256667777643
No 410
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=47.88 E-value=4.2 Score=30.72 Aligned_cols=48 Identities=10% Similarity=0.087 Sum_probs=35.1
Q ss_pred HHHHhHHhcCCCCCHHHHHHhc-CCCCCCce-----------e----ecCC---CeEEcChhcchhh
Q 043533 16 QAQLYKLIHGRAITLSELVSAL-DIQPTKTT-----------V----NGQE---EAYGLTAASTLLI 63 (301)
Q Consensus 16 ~l~lF~~L~~~p~t~~elA~~~-~~~~~~l~-----------v----e~~~---~~y~~t~~s~~L~ 63 (301)
++.|...|.++++++.|||+.+ |++...+. | ...+ -.|.+|+.++.|.
T Consensus 37 ~l~IL~~L~~g~~~~~eLa~~l~gis~~tls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~ 103 (131)
T 1yyv_A 37 GVLILVALRDGTHRFSDLRRXMGGVSEXMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVS 103 (131)
T ss_dssp HHHHHHHGGGCCEEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHhccCCHHHHHHHHHHHHHCCcEEEEecCCCCCeEEEEECccHHHHH
Confidence 4446667777999999999999 79888776 2 1112 2599999987544
No 411
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=47.67 E-value=5.6 Score=33.82 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=35.6
Q ss_pred HHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------eecCCCeEEcChhcc
Q 043533 15 GQAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VNGQEEAYGLTAAST 60 (301)
Q Consensus 15 ~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve~~~~~y~~t~~s~ 60 (301)
--+.|.+.|.+ +++|+.|||+++|++...+. |+.++++|.+++..-
T Consensus 22 r~l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~tL~~~G~v~~~~~~Y~Lg~~~~ 80 (265)
T 2ia2_A 22 RGLAVIRCFDHRNQRRTLSDVARATDLTRATARRFLLTLVELGYVATDGSAFWLTPRVL 80 (265)
T ss_dssp HHHHHHHTCCSSCSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEESSSEEEECGGGG
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCEEEEcHHHH
Confidence 35678888863 68999999999999887665 245578999988643
No 412
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=47.51 E-value=11 Score=28.62 Aligned_cols=31 Identities=10% Similarity=0.234 Sum_probs=26.3
Q ss_pred HHHHHhHHh-c-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLI-H-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L-~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.+...| . .+++|..+||+.++++...+.
T Consensus 48 ~~~~iL~~L~~~~~~~~~~ela~~l~i~~~tvs 80 (160)
T 3boq_A 48 AKFDAMAQLARNPDGLSMGKLSGALKVTNGNVS 80 (160)
T ss_dssp HHHHHHHHHHHCTTCEEHHHHHHHCSSCCSCHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCChhhHH
Confidence 467788888 3 579999999999999998887
No 413
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=47.47 E-value=9.2 Score=33.61 Aligned_cols=84 Identities=13% Similarity=0.191 Sum_probs=54.9
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC--CC--------C-cchhH
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR--FI--------P-PANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~--~~--------p-~~D~i 211 (301)
.....+||-+|+ |.|..+..+++.. +.+++++|. ++..+.+++ +... .+ |..+ .+ . .+|++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~-~~--d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEV-FI--DFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCE-EE--ETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCce-EE--ecCccHhHHHHHHHHhCCCCCEE
Confidence 566789999997 5788888888876 569999986 444443332 1111 11 3321 11 0 24555
Q ss_pred HH-----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 212 LF-----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 212 ~~-----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+- ..++.+.+.|++ +|+++++-.
T Consensus 243 i~~~g~~~~~~~~~~~l~~---~G~iv~~g~ 270 (347)
T 2hcy_A 243 INVSVSEAAIEASTRYVRA---NGTTVLVGM 270 (347)
T ss_dssp EECSSCHHHHHHHTTSEEE---EEEEEECCC
T ss_pred EECCCcHHHHHHHHHHHhc---CCEEEEEeC
Confidence 53 788999999999 899887754
No 414
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=47.23 E-value=8.3 Score=33.55 Aligned_cols=88 Identities=15% Similarity=0.057 Sum_probs=56.7
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCC----CC--cchhHHH-
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRF----IP--PANAFLF- 213 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~----~p--~~D~i~~- 213 (301)
+....+||-+| ||.|..+..+++.. +.++++.|. ++-.+.+++ +....+-.. |+.+. .+ .+|+++-
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 56678999998 57788888888875 569999997 555555443 211111111 11100 11 2566554
Q ss_pred ---HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ---KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ---~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..+..+.+.|++ +|+++++-..
T Consensus 217 ~g~~~~~~~~~~l~~---~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VGQDTWLTSLDSVAP---RGLVVSFGNA 241 (325)
T ss_dssp SCGGGHHHHHTTEEE---EEEEEECCCT
T ss_pred CChHHHHHHHHHhcC---CCEEEEEecC
Confidence 678889999999 8999887643
No 415
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=47.17 E-value=5.7 Score=33.59 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=37.4
Q ss_pred HHHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------eecCCCeEEcChhcchhh
Q 043533 14 QGQAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VNGQEEAYGLTAASTLLI 63 (301)
Q Consensus 14 ~~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve~~~~~y~~t~~s~~L~ 63 (301)
.--+.|.+.|.+ +++|+.|||+++|++...+. |+.++++|.+++....|.
T Consensus 14 ~r~l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~~~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 14 ERGFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSGGRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECGGGHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCCCEEEEcHHHHHHH
Confidence 345677888863 68999999999999887666 244468999998764444
No 416
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=46.92 E-value=17 Score=32.95 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=25.9
Q ss_pred CeEEEecCCccHHHH--HHHHHCCCCeEEEeec
Q 043533 151 GSLVDVGGGNVSFSR--IISEAFPGIKCTVLDL 181 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~--~l~~~~P~~~~~~~Dl 181 (301)
++||=||+|.|.+.. .|.+..|+.+++++|-
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 579999999997654 4777889999999985
No 417
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=46.84 E-value=8.7 Score=28.65 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=25.6
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.+...|..+++|..+||+.++++...+.
T Consensus 38 ~~~~iL~~l~~~~~~~~ela~~l~~s~~tvs 68 (146)
T 2gxg_A 38 LDFLVLRATSDGPKTMAYLANRYFVTQSAIT 68 (146)
T ss_dssp HHHHHHHHHTTSCBCHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhcCCcCHHHHHHHhCCCchhHH
Confidence 3666777777788999999999999888776
No 418
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=46.73 E-value=7.2 Score=30.49 Aligned_cols=43 Identities=14% Similarity=0.106 Sum_probs=33.2
Q ss_pred EEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeE
Q 043533 153 LVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLK 195 (301)
Q Consensus 153 vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~ 195 (301)
.-=+.||||.=..-.++++|+++.-.+--+.....+++.++.+
T Consensus 72 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnAN 114 (155)
T 1o1x_A 72 FGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHNNAN 114 (155)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCS
T ss_pred eEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcCCCc
Confidence 3345689999888999999999988887777777777644433
No 419
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=46.42 E-value=10 Score=27.96 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=26.0
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|. .+++|..+||+.++++...+.
T Consensus 34 ~~~~iL~~l~~~~~~~~~ela~~l~~~~~tvs 65 (139)
T 3bja_A 34 VQFGVIQVLAKSGKVSMSKLIENMGCVPSNMT 65 (139)
T ss_dssp HHHHHHHHHHHSCSEEHHHHHHHCSSCCTTHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCCChhHHH
Confidence 4667777775 478999999999999998887
No 420
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=45.71 E-value=20 Score=31.52 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=54.2
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-C--------CC--cchhH
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMLR-F--------IP--PANAF 211 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~~~-~--------~p--~~D~i 211 (301)
+....+||-.|+ |.|..+..+++.. +.+++++|. ++-.+.+++ +... .+ |..+ . .. .+|++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~-~~--d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHE-VF--NHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSE-EE--ETTSTTHHHHHHHHHCTTCEEEE
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCE-EE--eCCCchHHHHHHHHcCCCCcEEE
Confidence 566789999995 7788888888876 578999987 554444332 1111 11 2211 1 01 25555
Q ss_pred HH----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 212 LF----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 212 ~~----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
+- ..+..+.+.|++ +|+++++-.
T Consensus 244 i~~~G~~~~~~~~~~l~~---~G~iv~~g~ 270 (351)
T 1yb5_A 244 IEMLANVNLSKDLSLLSH---GGRVIVVGS 270 (351)
T ss_dssp EESCHHHHHHHHHHHEEE---EEEEEECCC
T ss_pred EECCChHHHHHHHHhccC---CCEEEEEec
Confidence 43 677888999999 899888763
No 421
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=45.37 E-value=7.3 Score=27.28 Aligned_cols=49 Identities=16% Similarity=0.176 Sum_probs=35.4
Q ss_pred HHHHHhHHhcC-CCCCHHHH----HHhcCCCCCCce-----------e----ecCCCeEEcChhcchhh
Q 043533 15 GQAQLYKLIHG-RAITLSEL----VSALDIQPTKTT-----------V----NGQEEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~el----A~~~~~~~~~l~-----------v----e~~~~~y~~t~~s~~L~ 63 (301)
.++.++..|.+ ++.|..+| |+.++++...+. | ......|.+|+.++.+.
T Consensus 9 ~q~~iL~~l~~~~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~r~~~~~LT~~G~~~~ 77 (99)
T 1tbx_A 9 PEAIVLAYLYDNEGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQERGEKRLYLTEKGKLFA 77 (99)
T ss_dssp HHHHHHHHHTTCTTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecCCceEEEECHHHHHHH
Confidence 45677888864 78999999 899999888776 2 12334578888887444
No 422
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=45.11 E-value=9.5 Score=28.47 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=26.9
Q ss_pred HHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 14 QGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 14 ~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
..++.+...|..+++|..|||+.++++...+.
T Consensus 38 ~~~~~iL~~l~~~~~t~~eLa~~l~~s~~tvs 69 (146)
T 3tgn_A 38 NTQEHILMLLSEESLTNSELARRLNVSQAAVT 69 (146)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHCCCHHHHH
Confidence 35677888888766999999999999988777
No 423
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=44.83 E-value=2.1 Score=37.90 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=55.4
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeechHHHhcCCC-C-CCeEEEeCCCCCC-----CC-cchhHHH---
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE-A-DNLKYIAGDMLRF-----IP-PANAFLF--- 213 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~-~-~ri~~~~~D~~~~-----~p-~~D~i~~--- 213 (301)
+....+||-+| ||.|..+..+++.. +.++++...++-.+.+++ + +.|. ...|+.+. -. .+|+++-
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFATARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence 56678999998 56788999999876 568888854665555543 1 1121 11111110 01 2566553
Q ss_pred -HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..+..+.+.|++ +|+++++-.
T Consensus 226 ~~~~~~~~~~l~~---~G~iv~~g~ 247 (343)
T 3gaz_A 226 GPVLDASFSAVKR---FGHVVSCLG 247 (343)
T ss_dssp THHHHHHHHHEEE---EEEEEESCC
T ss_pred cHHHHHHHHHHhc---CCeEEEEcc
Confidence 788999999999 899887654
No 424
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=44.75 E-value=8 Score=30.67 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=33.0
Q ss_pred EEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEE
Q 043533 154 VDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKY 196 (301)
Q Consensus 154 lDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~ 196 (301)
-=+.||||.=..-.++++|++++..+--+.....+++.++.++
T Consensus 81 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANV 123 (169)
T 3ph3_A 81 GIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANI 123 (169)
T ss_dssp EEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSE
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcE
Confidence 3456899998888999999999888877777777776444333
No 425
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.75 E-value=12 Score=30.27 Aligned_cols=78 Identities=8% Similarity=0.125 Sum_probs=45.7
Q ss_pred eEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCcchhHHH--------
Q 043533 152 SLVDVGGGNVSFSRIISEAF--PGIKCTVLDL-PHAVANLPEADNLKYIAGDMLRF-------IPPANAFLF-------- 213 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~--P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~~-------~p~~D~i~~-------- 213 (301)
+|+=+|+ |.++..+++.. -+.+++++|. ++.++...+..++.++.+|..++ +..+|++++
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 3555665 66666655532 2568999998 66665543233577889998762 233676665
Q ss_pred HHHHHHHHhcccCCCCcEEEE
Q 043533 214 KILKKRREAIASNGERGKVII 234 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i 234 (301)
.++....+.+.+ ..+++.
T Consensus 80 ~~~~~~a~~~~~---~~~iia 97 (218)
T 3l4b_C 80 LFIAQLVMKDFG---VKRVVS 97 (218)
T ss_dssp HHHHHHHHHTSC---CCEEEE
T ss_pred HHHHHHHHHHcC---CCeEEE
Confidence 344444454445 345443
No 426
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=44.54 E-value=6.6 Score=34.21 Aligned_cols=82 Identities=13% Similarity=0.069 Sum_probs=50.0
Q ss_pred eEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCC----CCCC-C-cchhHHH----HHHH
Q 043533 152 SLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDM----LRFI-P-PANAFLF----KILK 217 (301)
Q Consensus 152 ~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D~----~~~~-p-~~D~i~~----~iL~ 217 (301)
+||-+|+ |.|.++..+++.. +.++++++. ++-.+.+++ +....+-..+. .... . .+|+++- ..+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 230 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLA 230 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHH
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHH
Confidence 7999984 7788999999886 568888887 333333332 11111111111 1111 1 2666553 6788
Q ss_pred HHHHhcccCCCCcEEEEEee
Q 043533 218 KRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 218 ~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+.+.+++ +|+++++-.
T Consensus 231 ~~~~~l~~---~G~~v~~G~ 247 (328)
T 1xa0_A 231 TVLSRMRY---GGAVAVSGL 247 (328)
T ss_dssp HHHHTEEE---EEEEEECSC
T ss_pred HHHHhhcc---CCEEEEEee
Confidence 88999999 899887754
No 427
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=44.30 E-value=6.7 Score=29.34 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=22.5
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.+...|. .+++|..+||+.++++...+.
T Consensus 38 ~~~~vL~~l~~~~~~t~~eLa~~l~~~~~tvs 69 (142)
T 3ech_A 38 PDVHVLKLIDEQRGLNLQDLGRQMCRDKALIT 69 (142)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHC---CHHH
T ss_pred HHHHHHHHHHhCCCcCHHHHHHHhCCCHHHHH
Confidence 4556666775 479999999999999998877
No 428
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=44.22 E-value=7.6 Score=32.07 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=32.1
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCC
Q 043533 152 SLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEA 191 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~ 191 (301)
..-=+.||||.=..-.+.++|++++-.+--+.....++++
T Consensus 68 d~GIliCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~h 107 (214)
T 3ono_A 68 DFVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQI 107 (214)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHH
Confidence 3444679999999999999999998888777777777763
No 429
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=44.02 E-value=14 Score=33.85 Aligned_cols=87 Identities=8% Similarity=-0.030 Sum_probs=54.7
Q ss_pred ccCCCeEEEecC--CccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEe--CCCC-----------------C
Q 043533 147 FEGLGSLVDVGG--GNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIA--GDML-----------------R 203 (301)
Q Consensus 147 ~~~~~~vlDvGg--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~--~D~~-----------------~ 203 (301)
+....+||=+|+ |.|.++..+++.. +.++++++. ++-.+.+++ +....+-. .|+. +
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 566788999984 6788999999886 678887776 555555543 11111111 1110 0
Q ss_pred ---C-CC--cchhHHH----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 204 ---F-IP--PANAFLF----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 204 ---~-~p--~~D~i~~----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
. .+ .+|+++- ..+..+.+.|++ ||+++++-.
T Consensus 305 ~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~---~G~iv~~G~ 345 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPGRETFGASVFVTRK---GGTITTCAS 345 (456)
T ss_dssp HHHHHHTSCCEEEEEECSCHHHHHHHHHHEEE---EEEEEESCC
T ss_pred HHHHHhCCCCCcEEEEcCCchhHHHHHHHhhC---CcEEEEEec
Confidence 0 01 2555543 788899999999 899887654
No 430
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=43.85 E-value=29 Score=29.62 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=16.1
Q ss_pred HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
.+.+.+...|+. +|+++.+-..
T Consensus 140 ~~~~~~~p~m~~---~G~IInisS~ 161 (273)
T 4fgs_A 140 FTVQKALPLLAR---GSSVVLTGST 161 (273)
T ss_dssp HHHHHHTTTEEE---EEEEEEECCG
T ss_pred HHHHHHHHHHhh---CCeEEEEeeh
Confidence 677778888887 7887766543
No 431
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=43.62 E-value=11 Score=30.22 Aligned_cols=43 Identities=12% Similarity=0.124 Sum_probs=33.2
Q ss_pred EecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEE
Q 043533 155 DVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYI 197 (301)
Q Consensus 155 DvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~ 197 (301)
=+.||||.=..-.++++|+++...+--+.....+++.++.+++
T Consensus 86 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL 128 (179)
T 3k7p_A 86 VLAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIV 128 (179)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEE
T ss_pred EEEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEE
Confidence 3568999988889999999998888777777777764444333
No 432
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=43.57 E-value=12 Score=29.95 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=26.5
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcC-CCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALD-IQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~-~~~~~l~ 45 (301)
+++.|...|.++|.|+.+||+.++ ++...+.
T Consensus 24 ~Rl~il~~L~~~~~~~~~l~~~l~~~~~~~~s 55 (182)
T 4g6q_A 24 LRWRITQLLIGRSLTTRELAELLPDVATTTLY 55 (182)
T ss_dssp HHHHHHHHTTTSCEEHHHHHHHCTTBCHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHhcCCCHHHHH
Confidence 699999999999999999999996 7755443
No 433
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=43.34 E-value=19 Score=29.85 Aligned_cols=73 Identities=18% Similarity=0.148 Sum_probs=45.1
Q ss_pred CCeEEEecCCccHHHHH--HHHHCCCCeEEEeec---hHHHhcCCCCCCeEEEeCCCCC-CCCcchhHHH-----HHHHH
Q 043533 150 LGSLVDVGGGNVSFSRI--ISEAFPGIKCTVLDL---PHAVANLPEADNLKYIAGDMLR-FIPPANAFLF-----KILKK 218 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~--l~~~~P~~~~~~~Dl---p~~~~~a~~~~ri~~~~~D~~~-~~p~~D~i~~-----~iL~~ 218 (301)
.++||=||||.=..... |++. +.++++++. +++.+.+. ..+++++.+++.. .+..+|+|+. .+=..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~-~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~ 107 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEA-KGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKF 107 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHH-TTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHH-cCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHH
Confidence 57899999985444333 3333 567888875 33333222 4678998887765 4666888877 55455
Q ss_pred HHHhccc
Q 043533 219 RREAIAS 225 (301)
Q Consensus 219 ~~~aL~p 225 (301)
+++..+.
T Consensus 108 I~~~ak~ 114 (223)
T 3dfz_A 108 VKQHIKN 114 (223)
T ss_dssp HHHHSCT
T ss_pred HHHHHhC
Confidence 5555443
No 434
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=43.31 E-value=6.5 Score=30.56 Aligned_cols=48 Identities=17% Similarity=0.069 Sum_probs=35.1
Q ss_pred EEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeCC
Q 043533 153 LVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGD 200 (301)
Q Consensus 153 vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~--~~ri~~~~~D 200 (301)
.-=+.||||.=..-.+.++|+++.-.+--+.....+++ ..+|=.+.+-
T Consensus 61 ~GIliCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~r 110 (149)
T 2vvr_A 61 GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSR 110 (149)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETT
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEECcc
Confidence 34457999998899999999999888877777777776 3444444443
No 435
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=42.83 E-value=4.8 Score=34.17 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=34.1
Q ss_pred HHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------eec--CCCeEEcChhcc
Q 043533 16 QAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VNG--QEEAYGLTAAST 60 (301)
Q Consensus 16 ~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve~--~~~~y~~t~~s~ 60 (301)
-+.|.+.|.+ +++|+.|||+++|++...+. |++ +.++|.+++..-
T Consensus 8 al~IL~~l~~~~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~~~~Y~lG~~~~ 67 (260)
T 3r4k_A 8 ALTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEGARSYRLGPQVL 67 (260)
T ss_dssp HHHHHTTCBTTBSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSSSSEEEECTTHH
T ss_pred HHHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCCCCcEEcCHHHH
Confidence 3667788864 67999999999999888766 233 348999988643
No 436
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=42.61 E-value=8.4 Score=32.11 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=32.9
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCC
Q 043533 152 SLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADN 193 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~r 193 (301)
..-=+.||||.=..-.+.++|++++-.+--+.....+++.++
T Consensus 85 d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNn 126 (231)
T 3c5y_A 85 DFVVTGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQIND 126 (231)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHHTC
T ss_pred CeEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhcC
Confidence 344467999999999999999999888877777777776333
No 437
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=42.49 E-value=9.9 Score=25.94 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=23.7
Q ss_pred HHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 18 QLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 18 ~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.|-+.|. .|.++++|||+.+++++..++
T Consensus 6 ~Il~~L~~~g~vsv~eLa~~l~VS~~TIR 34 (78)
T 1xn7_A 6 QVRDLLALRGRMEAAQISQTLNTPQPMIN 34 (78)
T ss_dssp HHHHHHHHSCSBCHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHCcCHHHHH
Confidence 3556675 589999999999999999888
No 438
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=41.91 E-value=7.1 Score=32.30 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=33.3
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCC
Q 043533 151 GSLVDVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADN 193 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~r 193 (301)
...-=+.||||.=..-.+.++|++++-.+--+.....++++++
T Consensus 68 ~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNn 110 (216)
T 2ppw_A 68 VDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQING 110 (216)
T ss_dssp CSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTC
T ss_pred CCeEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcC
Confidence 3344567999999999999999999888877777777776333
No 439
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=41.68 E-value=6.9 Score=32.75 Aligned_cols=47 Identities=15% Similarity=0.322 Sum_probs=34.1
Q ss_pred HHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------ee--cCCCeEEcChhcchh
Q 043533 16 QAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VN--GQEEAYGLTAASTLL 62 (301)
Q Consensus 16 ~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve--~~~~~y~~t~~s~~L 62 (301)
-+.|.+.|.+ +++|+.|||+++|++...+. |+ .++++|.+++..-.|
T Consensus 8 ~l~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 8 AASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGPAGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGGGCEEEECSHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCCCCeEEECHHHHHH
Confidence 4567777764 47999999999999877666 22 234789998865433
No 440
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=41.32 E-value=16 Score=29.51 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=27.6
Q ss_pred HHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
.+..|...|.++++|..|||+.+|+++..+.
T Consensus 21 ~~~~IL~~L~~~~~s~~eLA~~lglS~stv~ 51 (192)
T 1uly_A 21 TRRKILKLLRNKEMTISQLSEILGKTPQTIY 51 (192)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 4677899998899999999999999988776
No 441
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=40.38 E-value=13 Score=29.89 Aligned_cols=43 Identities=14% Similarity=0.097 Sum_probs=32.6
Q ss_pred EecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEE
Q 043533 155 DVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYI 197 (301)
Q Consensus 155 DvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~ri~~~ 197 (301)
=+-||||.=..-.++++|+++...+--+.....+++.++.+++
T Consensus 94 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL 136 (184)
T 3sgw_A 94 LMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVL 136 (184)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEE
T ss_pred EEEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEE
Confidence 3468999888889999999998888777777777764444333
No 442
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=40.06 E-value=11 Score=28.82 Aligned_cols=49 Identities=10% Similarity=0.078 Sum_probs=35.2
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce-----------e--e--cCC---CeEEcChhcchhh
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT-----------V--N--GQE---EAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~-----------v--e--~~~---~~y~~t~~s~~L~ 63 (301)
.++.+...|. .+++|..+||+.++++...+. | + ..+ -.+.+|+.++.+.
T Consensus 47 ~q~~iL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 114 (162)
T 3k0l_A 47 PQFTALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKL 114 (162)
T ss_dssp HHHHHHHHHHHCTTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHH
Confidence 3556666775 489999999999999998887 2 1 122 2388888887544
No 443
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=40.06 E-value=9.4 Score=33.73 Aligned_cols=81 Identities=14% Similarity=0.164 Sum_probs=52.9
Q ss_pred CeEEEecC-CccHHH-HHHH-HHCCCCe-EEEeec-hH---HHhcCCCCCCeEEEeCCCCC-CC------C-cchhHHH-
Q 043533 151 GSLVDVGG-GNVSFS-RIIS-EAFPGIK-CTVLDL-PH---AVANLPEADNLKYIAGDMLR-FI------P-PANAFLF- 213 (301)
Q Consensus 151 ~~vlDvGg-G~G~~~-~~l~-~~~P~~~-~~~~Dl-p~---~~~~a~~~~ri~~~~~D~~~-~~------p-~~D~i~~- 213 (301)
.+||-+|+ |.|.++ ..++ +.. +.+ ++++|. ++ -.+.+++. ..+.+ |..+ ++ + .+|+++-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga~~v--~~~~~~~~~i~~~~gg~Dvvid~ 249 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL-DATYV--DSRQTPVEDVPDVYEQMDFIYEA 249 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT-TCEEE--ETTTSCGGGHHHHSCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc-CCccc--CCCccCHHHHHHhCCCCCEEEEC
Confidence 78999995 457788 8888 654 566 999998 44 45555431 12222 3322 11 1 2566654
Q ss_pred ----HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 ----KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ----~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
..++.+.+.|++ +|+++++-..
T Consensus 250 ~g~~~~~~~~~~~l~~---~G~iv~~g~~ 275 (357)
T 2b5w_A 250 TGFPKHAIQSVQALAP---NGVGALLGVP 275 (357)
T ss_dssp SCCHHHHHHHHHHEEE---EEEEEECCCC
T ss_pred CCChHHHHHHHHHHhc---CCEEEEEeCC
Confidence 588999999999 8998887643
No 444
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=40.01 E-value=30 Score=30.41 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=38.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCC----CeEEEeechHHHhcCCCCCCeEEEeCCCC
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPG----IKCTVLDLPHAVANLPEADNLKYIAGDML 202 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~----~~~~~~Dlp~~~~~a~~~~ri~~~~~D~~ 202 (301)
+..||=+|.+.|....-|.+.||+ ++.+++|-..-+...+..++|+++. +++
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~-~ff 131 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVT-RFV 131 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEE-CCC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeeh-hhc
Confidence 459999999999999999988876 7999999733223333345677665 344
No 445
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=39.69 E-value=7.4 Score=34.40 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=54.8
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC--CCCCCC----C-cchhHHH--
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG--DMLRFI----P-PANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~--D~~~~~----p-~~D~i~~-- 213 (301)
+....+||-+| ||.|..+..+++.. +.++++.|. ++-.+.+++ +....+-.. |+.+.+ + .+|+++-
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 56678999995 56788888888876 669999996 555554443 111111111 110000 1 1555553
Q ss_pred --HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 --KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 --~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..+..+.+.|++ +|+++++-.
T Consensus 244 g~~~~~~~~~~l~~---~G~iv~~g~ 266 (353)
T 4dup_A 244 GAAYFERNIASLAK---DGCLSIIAF 266 (353)
T ss_dssp CGGGHHHHHHTEEE---EEEEEECCC
T ss_pred CHHHHHHHHHHhcc---CCEEEEEEe
Confidence 678888999999 899887754
No 446
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=39.68 E-value=2.5 Score=37.36 Aligned_cols=83 Identities=13% Similarity=0.174 Sum_probs=52.6
Q ss_pred CCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeC-CCCCC----CC-cchhHHH-----
Q 043533 149 GLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAG-DMLRF----IP-PANAFLF----- 213 (301)
Q Consensus 149 ~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~-D~~~~----~p-~~D~i~~----- 213 (301)
...+||-+| ||.|.++..+++.. +.+++++|. ++-.+.+++ +....+-.. |+.+. .+ .+|+++-
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~ 228 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTD 228 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCch
Confidence 567888885 46688888899876 569999998 665555543 111111101 11110 11 2676653
Q ss_pred HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
..++.+.+.|++ +|+++.+
T Consensus 229 ~~~~~~~~~l~~---~G~iv~~ 247 (346)
T 3fbg_A 229 MYYDDMIQLVKP---RGHIATI 247 (346)
T ss_dssp HHHHHHHHHEEE---EEEEEES
T ss_pred HHHHHHHHHhcc---CCEEEEE
Confidence 668999999999 8988765
No 447
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=39.42 E-value=14 Score=27.88 Aligned_cols=31 Identities=10% Similarity=0.158 Sum_probs=25.7
Q ss_pred HHHHHhHHhcC-CCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHG-RAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|.. +++|..+||+.++++...+.
T Consensus 44 ~~~~iL~~l~~~~~~t~~ela~~l~i~~~tvs 75 (155)
T 3cdh_A 44 PEWRVLACLVDNDAMMITRLAKLSLMEQSRMT 75 (155)
T ss_dssp HHHHHHHHHSSCSCBCHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHCCCcCHHHHHHHHCCCHHHHH
Confidence 36677788864 78999999999999888776
No 448
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=39.00 E-value=5 Score=29.74 Aligned_cols=31 Identities=6% Similarity=-0.063 Sum_probs=25.6
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|. .+++|..+||+.++++...+.
T Consensus 39 ~~~~iL~~l~~~~~~t~~ela~~l~~~~~tvs 70 (140)
T 2nnn_A 39 TQWAALVRLGETGPCPQNQLGRLTAMDAATIK 70 (140)
T ss_dssp HHHHHHHHHHHHSSBCHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHCCCHHHHH
Confidence 4667788885 479999999999999888776
No 449
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=38.76 E-value=8.9 Score=28.77 Aligned_cols=45 Identities=22% Similarity=0.318 Sum_probs=32.9
Q ss_pred HhHHhc-CCCCCHHHHHHhcCCCCCCce-----------ee-cCCCeEEcChhcchhh
Q 043533 19 LYKLIH-GRAITLSELVSALDIQPTKTT-----------VN-GQEEAYGLTAASTLLI 63 (301)
Q Consensus 19 lF~~L~-~~p~t~~elA~~~~~~~~~l~-----------ve-~~~~~y~~t~~s~~L~ 63 (301)
|+..+. .+++|..+||+.++++...+. |+ ...+.|.+|+.+..+.
T Consensus 13 i~~l~~~~~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 13 IYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIG 70 (142)
T ss_dssp HHHHHHHHSSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHHHHH
T ss_pred HHHHHhhcCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeeCceEEEchhHHHHH
Confidence 444443 478999999999999988776 22 2346799999886443
No 450
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=38.08 E-value=35 Score=30.53 Aligned_cols=89 Identities=16% Similarity=0.081 Sum_probs=53.3
Q ss_pred ccCCCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEe--CCCCCC----CC--cchhHHH--
Q 043533 147 FEGLGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIA--GDMLRF----IP--PANAFLF-- 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~--~D~~~~----~p--~~D~i~~-- 213 (301)
.....+||-+|+|. |.++..+++..--.+++++|. ++-.+.+++ +....+-. .|+.+. .+ .+|+++-
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 45667888888754 778888998874338999996 665555543 11111110 111110 11 2566553
Q ss_pred --H--HHHHHHHhc----ccCCCCcEEEEEeee
Q 043533 214 --K--ILKKRREAI----ASNGERGKVIIIDIV 238 (301)
Q Consensus 214 --~--iL~~~~~aL----~p~~~gg~l~i~e~~ 238 (301)
. .+..+.++| ++ +|+++++-..
T Consensus 291 g~~~~~~~~~~~~l~~~~~~---~G~iv~~G~~ 320 (404)
T 3ip1_A 291 GVPQLVWPQIEEVIWRARGI---NATVAIVARA 320 (404)
T ss_dssp SCHHHHHHHHHHHHHHCSCC---CCEEEECSCC
T ss_pred CCcHHHHHHHHHHHHhccCC---CcEEEEeCCC
Confidence 2 666666677 99 8999987653
No 451
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=38.05 E-value=32 Score=29.76 Aligned_cols=61 Identities=18% Similarity=0.243 Sum_probs=35.0
Q ss_pred CCeEEEecCCccH--HHHHHHHHCCCCeEEEeechH-HHhcCCC-----CCCeEEEeCCCCCCCCcchhHH
Q 043533 150 LGSLVDVGGGNVS--FSRIISEAFPGIKCTVLDLPH-AVANLPE-----ADNLKYIAGDMLRFIPPANAFL 212 (301)
Q Consensus 150 ~~~vlDvGgG~G~--~~~~l~~~~P~~~~~~~Dlp~-~~~~a~~-----~~ri~~~~~D~~~~~p~~D~i~ 212 (301)
..+|.=||+|... ++..++.+..-.+++++|..+ ....+.. .++++.. .|+ +.+.++|+|+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CCH-HHHCCCCEEE
Confidence 4689999999633 666666665444899999943 2111111 3466653 565 4454455553
No 452
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=37.60 E-value=14 Score=27.35 Aligned_cols=31 Identities=10% Similarity=0.104 Sum_probs=25.5
Q ss_pred HHHHHhHHh-c-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLI-H-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L-~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.+...| . .+++|..+||+.++++...+.
T Consensus 38 ~~~~iL~~l~~~~~~~t~~~la~~l~~s~~~vs 70 (146)
T 2fbh_A 38 ARWLVLLHLARHRDSPTQRELAQSVGVEGPTLA 70 (146)
T ss_dssp THHHHHHHHHHCSSCCBHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHhCCChhhHH
Confidence 356677777 4 579999999999999888776
No 453
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=37.40 E-value=6.8 Score=29.43 Aligned_cols=31 Identities=3% Similarity=0.207 Sum_probs=25.9
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|. .+++|..+||+.++++...+.
T Consensus 41 ~~~~iL~~l~~~~~~t~~ela~~l~~~~~tvs 72 (148)
T 3nrv_A 41 TEWRIISVLSSASDCSVQKISDILGLDKAAVS 72 (148)
T ss_dssp HHHHHHHHHHHSSSBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHH
Confidence 5677777775 478999999999999888776
No 454
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=37.34 E-value=26 Score=23.45 Aligned_cols=31 Identities=10% Similarity=0.259 Sum_probs=23.4
Q ss_pred HHHHHhHHhcC---CCCCHHHHHHhc-----CCCCCCce
Q 043533 15 GQAQLYKLIHG---RAITLSELVSAL-----DIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~---~p~t~~elA~~~-----~~~~~~l~ 45 (301)
.++.|.+.|.+ ++.|++||++.+ +++...+.
T Consensus 18 ~r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVy 56 (83)
T 2fu4_A 18 PRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVY 56 (83)
T ss_dssp HHHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHH
Confidence 36778888864 689999999999 66554443
No 455
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=37.19 E-value=23 Score=30.92 Aligned_cols=85 Identities=18% Similarity=0.215 Sum_probs=54.2
Q ss_pred ccCCCeEEEecCC-ccHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeC---CCCCC----CC--cchhHHH
Q 043533 147 FEGLGSLVDVGGG-NVSFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAG---DMLRF----IP--PANAFLF 213 (301)
Q Consensus 147 ~~~~~~vlDvGgG-~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~-~~ri~~~~~---D~~~~----~p--~~D~i~~ 213 (301)
+ ...+||-+|+| .|..+..+++.. +. +++++|. ++-.+.+++ +.. .++.. |+.+. .+ .+|+++-
T Consensus 166 ~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 166 I-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGAD-YVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp C-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCS-EEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCC-EEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 5 66789999975 478888888886 55 8999987 555544443 111 11111 11100 01 2666654
Q ss_pred -----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 -----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 -----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
..++.+.+.|++ +|+++.+-.
T Consensus 243 ~~g~~~~~~~~~~~l~~---~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSGAPKALEQGLQAVTP---AGRVSLLGL 268 (348)
T ss_dssp CSCCHHHHHHHHHHEEE---EEEEEECCC
T ss_pred CCCCHHHHHHHHHHHhc---CCEEEEEcc
Confidence 788999999999 898887754
No 456
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.74 E-value=83 Score=26.08 Aligned_cols=23 Identities=4% Similarity=0.232 Sum_probs=17.6
Q ss_pred HHHHHHHHhcccCCCCcEEEEEeeee
Q 043533 214 KILKKRREAIASNGERGKVIIIDIVI 239 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e~~~ 239 (301)
.+.+.+...|++ +|+++.+-...
T Consensus 133 ~~~~~~~~~~~~---~g~iv~isS~~ 155 (270)
T 3is3_A 133 FVAREAYRHLTE---GGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHHHHCCT---TCEEEEECCTT
T ss_pred HHHHHHHHHHhc---CCeEEEEeCch
Confidence 677888888888 78888776544
No 457
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=36.33 E-value=7.9 Score=30.03 Aligned_cols=47 Identities=11% Similarity=-0.018 Sum_probs=34.5
Q ss_pred EecCCccHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeCCC
Q 043533 155 DVGGGNVSFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 201 (301)
Q Consensus 155 DvGgG~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~--~~ri~~~~~D~ 201 (301)
=+.||||.=..-.++++|+++.-.+--+.....+++ ..+|=.+.+-+
T Consensus 68 IliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 116 (148)
T 4em8_A 68 VLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRY 116 (148)
T ss_dssp EEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTT
T ss_pred EEEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 356899988888999999999888877777777776 34444444433
No 458
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=36.24 E-value=18 Score=28.29 Aligned_cols=21 Identities=19% Similarity=0.369 Sum_probs=19.5
Q ss_pred CCCCCHHHHHHhcCCCCCCce
Q 043533 25 GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 25 ~~p~t~~elA~~~~~~~~~l~ 45 (301)
++++|.++||+.+++++..++
T Consensus 26 ~~~~s~~~IA~~~~is~~~l~ 46 (162)
T 3k69_A 26 DSKVASRELAQSLHLNPVMIR 46 (162)
T ss_dssp TSCBCHHHHHHHHTSCGGGTH
T ss_pred CCCcCHHHHHHHHCcCHHHHH
Confidence 368999999999999999998
No 459
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=35.70 E-value=13 Score=25.67 Aligned_cols=31 Identities=16% Similarity=0.291 Sum_probs=26.7
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|. +++.|..|||+.++++...+.
T Consensus 17 ~~~~iL~~L~~~~~~~~~ela~~l~is~~tvs 48 (100)
T 1ub9_A 17 VRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLD 48 (100)
T ss_dssp HHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCcCHHHHHHHHCcCHHHHH
Confidence 5788898885 589999999999999888776
No 460
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=35.65 E-value=13 Score=32.33 Aligned_cols=82 Identities=17% Similarity=0.122 Sum_probs=50.8
Q ss_pred eEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCC----CCCCC-C-cchhHHH----HHHH
Q 043533 152 SLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGD----MLRFI-P-PANAFLF----KILK 217 (301)
Q Consensus 152 ~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~~D----~~~~~-p-~~D~i~~----~iL~ 217 (301)
+||-+| ||.|..+..+++.. +.++++++. ++-.+.+++ +....+-..| ..... . .+|+++- ..+.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 231 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLA 231 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHH
Confidence 789898 47788889998876 468888886 333333332 1111111111 11111 1 2676654 7888
Q ss_pred HHHHhcccCCCCcEEEEEee
Q 043533 218 KRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 218 ~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+.+.+++ ||+++++-.
T Consensus 232 ~~~~~l~~---~G~iv~~G~ 248 (330)
T 1tt7_A 232 SLLSKIQY---GGSVAVSGL 248 (330)
T ss_dssp HHHTTEEE---EEEEEECCC
T ss_pred HHHHhhcC---CCEEEEEec
Confidence 99999999 899887754
No 461
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=35.62 E-value=8.6 Score=35.54 Aligned_cols=92 Identities=18% Similarity=0.257 Sum_probs=52.9
Q ss_pred CCeEEEecCCccHH--HHHHHHHCCCCeEEEeec-hHHHhcCCC-------------------CCCeEEEe--------C
Q 043533 150 LGSLVDVGGGNVSF--SRIISEAFPGIKCTVLDL-PHAVANLPE-------------------ADNLKYIA--------G 199 (301)
Q Consensus 150 ~~~vlDvGgG~G~~--~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-------------------~~ri~~~~--------~ 199 (301)
-.+|.-||.|.=.+ +..++++ +-+++++|. ++.++...+ ..|++|.. .
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 46788888775443 4445545 458999999 655543321 34555432 1
Q ss_pred CCC--C-CCCc-----chhHHH-HHHHHHHHhcccCCCCcEEEEEeeeeCCCcc
Q 043533 200 DML--R-FIPP-----ANAFLF-KILKKRREAIASNGERGKVIIIDIVINAEEE 244 (301)
Q Consensus 200 D~~--~-~~p~-----~D~i~~-~iL~~~~~aL~p~~~gg~l~i~e~~~~~~~~ 244 (301)
|+. . |-|. +|+-.+ ...+.+.+.|++. ..|.++|++...+..-.
T Consensus 99 d~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~-~~g~lVV~eSTVppGtt 151 (444)
T 3vtf_A 99 DATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAK-GRWHLVVVKSTVPPGTT 151 (444)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHH-CSCCEEEECSCCCTTTT
T ss_pred CceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhc-CCCeEEEEeCCCCCchH
Confidence 211 1 2221 565444 7778888888751 13678888876665433
No 462
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=35.02 E-value=38 Score=26.26 Aligned_cols=53 Identities=15% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCeEEEecCCc-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC
Q 043533 150 LGSLVDVGGGN-VSFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR 203 (301)
Q Consensus 150 ~~~vlDvGgG~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~ 203 (301)
..+|+=+|+|. |......+.+..+.+++++|. ++.++.+++ ..+.++.+|..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~ 93 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATD 93 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCC
Confidence 35788888753 332222222211457999998 665555442 345666777654
No 463
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=34.99 E-value=11 Score=26.41 Aligned_cols=28 Identities=7% Similarity=0.147 Sum_probs=23.7
Q ss_pred HHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 18 QLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 18 ~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.|-+.|. .|.+|++|||+.+++++..++
T Consensus 6 ~Il~~L~~~g~vsv~eLA~~l~VS~~TIR 34 (87)
T 2k02_A 6 EVRDMLALQGRMEAKQLSARLQTPQPLID 34 (87)
T ss_dssp HHHHHHHHSCSEEHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHCcCHHHHH
Confidence 3566675 589999999999999999888
No 464
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=34.94 E-value=24 Score=24.02 Aligned_cols=31 Identities=10% Similarity=0.238 Sum_probs=25.0
Q ss_pred HHHHHhHHhcC--CCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHG--RAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~ 45 (301)
.+-.|.+.|.+ .|++..+||+++|++..-+.
T Consensus 20 ~eekVLe~LkeaG~PlkageIae~~GvdKKeVd 52 (80)
T 2lnb_A 20 LEQRILQVLTEAGSPVKLAQLVKECQAPKRELN 52 (80)
T ss_dssp HHHHHHHHHHHHTSCEEHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHH
Confidence 35556777753 79999999999999988776
No 465
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=34.71 E-value=41 Score=30.97 Aligned_cols=78 Identities=12% Similarity=0.232 Sum_probs=44.8
Q ss_pred CCeEEEecCCc-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------------CCCeEEEeCCCCCCC
Q 043533 150 LGSLVDVGGGN-VS-FSRIISEAFPGIKCTVLDL-PHAVANLPE---------------------ADNLKYIAGDMLRFI 205 (301)
Q Consensus 150 ~~~vlDvGgG~-G~-~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~---------------------~~ri~~~~~D~~~~~ 205 (301)
..+|.-||+|. |. ++..+++ -+.+++++|. ++.++.+.+ .....+ ..|. +..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 45799999886 32 3333333 3578999998 554443211 111222 4454 333
Q ss_pred CcchhHHH----------HHHHHHHHhcccCCCCcEEEEE
Q 043533 206 PPANAFLF----------KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 206 p~~D~i~~----------~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
..+|+|+. .+++++...++| +.+++.
T Consensus 113 ~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~----~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEAVFEDMNLKKKVFAELSALCKP----GAFLCT 148 (463)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCT----TCEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCC----CeEEEe
Confidence 34676665 677788888888 556654
No 466
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=34.64 E-value=35 Score=19.55 Aligned_cols=25 Identities=8% Similarity=-0.009 Sum_probs=18.0
Q ss_pred hHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 20 YKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 20 F~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
...+.+ ..|..+||+.+|++...+.
T Consensus 15 ~~~~~~-g~s~~~IA~~lgis~~Tv~ 39 (51)
T 1tc3_C 15 DVMKLL-NVSLHEMSRKISRSRHCIR 39 (51)
T ss_dssp HHHHHT-TCCHHHHHHHHTCCHHHHH
T ss_pred HHHHHc-CCCHHHHHHHHCcCHHHHH
Confidence 333443 4899999999999865544
No 467
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=34.51 E-value=24 Score=26.15 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=27.3
Q ss_pred HHHHHHHHhHHhc--CCCCCHHHHHHhcCCCCCCce
Q 043533 12 LFQGQAQLYKLIH--GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 12 ~~~~~l~lF~~L~--~~p~t~~elA~~~~~~~~~l~ 45 (301)
+=..++.++..|. .+++|..+||+.++++...+.
T Consensus 33 l~~~~~~iL~~l~~~~~~~~~~~la~~l~i~~~~vs 68 (147)
T 2hr3_A 33 VQFSQLVVLGAIDRLGGDVTPSELAAAERMRSSNLA 68 (147)
T ss_dssp HHHHHHHHHHHHHHTTSCBCHHHHHHHTTCCHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCHHHHHHHhCCChhhHH
Confidence 3345677777775 579999999999999888776
No 468
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=34.42 E-value=10 Score=28.29 Aligned_cols=49 Identities=12% Similarity=0.033 Sum_probs=34.6
Q ss_pred HHHHHhHHhcC-CCCCHHHHHHhcCCCCCCce-----------e--ec-----CCCeEEcChhcchhh
Q 043533 15 GQAQLYKLIHG-RAITLSELVSALDIQPTKTT-----------V--NG-----QEEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~elA~~~~~~~~~l~-----------v--e~-----~~~~y~~t~~s~~L~ 63 (301)
.++.+...|.. +++|..|||+.++++...+. | +. ..-.+.+|+.++.+.
T Consensus 38 ~~~~iL~~l~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 105 (143)
T 3oop_A 38 EQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHH
Confidence 45566666753 89999999999999988776 2 11 123478888887544
No 469
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=34.14 E-value=8.7 Score=34.62 Aligned_cols=87 Identities=8% Similarity=-0.075 Sum_probs=50.4
Q ss_pred HHHhhhhhcccCCCeEEEecCCccHHHHHHHHHCCCCeEEE-eec-hHHHhcCCCCCCeEEEeCCCCCCCCc-chhHHH-
Q 043533 138 VVKSECKQIFEGLGSLVDVGGGNVSFSRIISEAFPGIKCTV-LDL-PHAVANLPEADNLKYIAGDMLRFIPP-ANAFLF- 213 (301)
Q Consensus 138 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~P~~~~~~-~Dl-p~~~~~a~~~~ri~~~~~D~~~~~p~-~D~i~~- 213 (301)
++ +.++ ....+||+++-+.|.++..+. |..+++. .|. +.-..... .++.....+-.++.|. +|++++
T Consensus 38 l~-~~~~---~~~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 38 LQ-KTVE---PFGERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRCLTA--SGLQARLALPWEAAAGAYDLVVLA 108 (381)
T ss_dssp HH-TTCC---CCSSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHHHHH--TTCCCEECCGGGSCTTCEEEEEEE
T ss_pred HH-HHHH---HhCCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHHHHH--cCCCccccCCccCCcCCCCEEEEE
Confidence 45 5554 223689999999999887775 3334444 455 33222111 1222111222223344 777665
Q ss_pred -----------HHHHHHHHhcccCCCCcEEEEEe
Q 043533 214 -----------KILKKRREAIASNGERGKVIIID 236 (301)
Q Consensus 214 -----------~iL~~~~~aL~p~~~gg~l~i~e 236 (301)
..|.++.+.|+| ||.|++.-
T Consensus 109 ~Pk~k~~~~~~~~l~~~~~~l~~---g~~i~~~g 139 (381)
T 3dmg_A 109 LPAGRGTAYVQASLVAAARALRM---GGRLYLAG 139 (381)
T ss_dssp CCGGGCHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCcchhHHHHHHHHHHHHHhCCC---CCEEEEEE
Confidence 677888889999 78887765
No 470
>1jko_C HIN recombinase, DNA-invertase HIN; water-mediated recognition, protein-DNA complex, A10G mutant, DNA binding protein/DNA complex; 2.24A {Synthetic} SCOP: a.4.1.2 PDB: 1ijw_C* 1jj6_C* 1jj8_C* 1hcr_A 1jkp_C 1jkq_C 1jkr_C
Probab=34.07 E-value=28 Score=20.35 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=17.9
Q ss_pred HhHHhcCCCCCHHHHHHhcCCCCCCc
Q 043533 19 LYKLIHGRAITLSELVSALDIQPTKT 44 (301)
Q Consensus 19 lF~~L~~~p~t~~elA~~~~~~~~~l 44 (301)
+...+.+| .|..+||+.+|++...+
T Consensus 14 i~~l~~~g-~s~~~ia~~lgvs~~Tv 38 (52)
T 1jko_C 14 ISRLLEKG-HPRQQLAIIFGIGVSTL 38 (52)
T ss_dssp HHHHHHTT-CCHHHHHHTTSCCHHHH
T ss_pred HHHHHHcC-CCHHHHHHHHCCCHHHH
Confidence 34444545 99999999999876543
No 471
>3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum}
Probab=33.99 E-value=13 Score=26.17 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=22.5
Q ss_pred HhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 19 LYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 19 lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
|-+.+.+++.|+++||+.+|++++.+.
T Consensus 11 i~~~~~~~~~~~~~lA~~~~~S~~~l~ 37 (103)
T 3lsg_A 11 IEESYTDSQFTLSVLSEKLDLSSGYLS 37 (103)
T ss_dssp HHHHTTCTTCCHHHHHHHTTCCHHHHH
T ss_pred HHHHccCCCCCHHHHHHHHCcCHHHHH
Confidence 445566668999999999999998887
No 472
>1zk8_A Transcriptional regulator, TETR family; TETR member,transcriptional regulator, STRU genomics, PSI, protein structure initiative; 2.15A {Bacillus cereus atcc 14579} SCOP: a.4.1.9 a.121.1.1
Probab=33.93 E-value=38 Score=25.72 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=33.7
Q ss_pred CcCChHHHHHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 5 QDQGAKELFQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 5 ~~~~~~~~~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
....++.++.+-+.||..=.=...|+.+||+++|++...+.
T Consensus 6 ~~~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t~Y 46 (183)
T 1zk8_A 6 IGLTLQKIVETAAEIADANGVQEVTLASLAQTLGVRSPSLY 46 (183)
T ss_dssp CCCCHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcCccccCHHHHHHHcCCCchHHH
Confidence 44688999999999988754457999999999999887665
No 473
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=33.91 E-value=1e+02 Score=25.58 Aligned_cols=22 Identities=14% Similarity=0.314 Sum_probs=16.7
Q ss_pred HHHHHHHHhcccCCCCcEEEEEeee
Q 043533 214 KILKKRREAIASNGERGKVIIIDIV 238 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e~~ 238 (301)
.+++.+...|++ +|+++.+...
T Consensus 146 ~~~~~~~~~m~~---~g~iv~isS~ 167 (271)
T 3v2g_A 146 VAIRSASRHLGD---GGRIITIGSN 167 (271)
T ss_dssp HHHHHHHHHCCT---TCEEEEECCG
T ss_pred HHHHHHHHHHhc---CCEEEEEeCh
Confidence 677888888887 7888877553
No 474
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=33.90 E-value=40 Score=30.58 Aligned_cols=30 Identities=13% Similarity=0.040 Sum_probs=24.6
Q ss_pred eEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 043533 152 SLVDVGGGNVSFSRI--ISEAFPGIKCTVLDL 181 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~--l~~~~P~~~~~~~Dl 181 (301)
+|+=||+|.+.+..+ +++..++.+++++|-
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 688899999986554 677788899999985
No 475
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=33.76 E-value=56 Score=27.85 Aligned_cols=51 Identities=16% Similarity=0.251 Sum_probs=33.1
Q ss_pred eEEEecCCccHHHHHHHHH---CCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC
Q 043533 152 SLVDVGGGNVSFSRIISEA---FPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR 203 (301)
Q Consensus 152 ~vlDvGgG~G~~~~~l~~~---~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~ 203 (301)
+||=. ||+|.++..++++ .++.++++++. +.-.+......+++++.+|+.+
T Consensus 2 ~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 2 RVLIL-GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI 56 (345)
T ss_dssp EEEEE-TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT
T ss_pred eEEEE-CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccC
Confidence 34544 5677777776654 34678999987 3333332335689999999875
No 476
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=33.35 E-value=15 Score=33.42 Aligned_cols=87 Identities=10% Similarity=-0.045 Sum_probs=54.0
Q ss_pred ccCCCeEEEec--CCccHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEe--CCCCCC----------------
Q 043533 147 FEGLGSLVDVG--GGNVSFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIA--GDMLRF---------------- 204 (301)
Q Consensus 147 ~~~~~~vlDvG--gG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~-~~ri~~~~--~D~~~~---------------- 204 (301)
+....+||-.| ||.|..+..+++.. +.++++.+. ++-.+.+++ +....+.. .|+...
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 56678999998 46788888888876 568888776 554444433 11111111 121000
Q ss_pred ------CCc-chhHHH----HHHHHHHHhcccCCCCcEEEEEee
Q 043533 205 ------IPP-ANAFLF----KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 205 ------~p~-~D~i~~----~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+. +|+++- ..++.+.+.|++ ||+++++-.
T Consensus 297 ~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~---~G~iv~~G~ 337 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTGRVTFGLSVIVARR---GGTVVTCGS 337 (447)
T ss_dssp HHHHHHHSSCCSEEEECSCHHHHHHHHHHSCT---TCEEEESCC
T ss_pred HHHHHHhCCCceEEEECCCchHHHHHHHHHhc---CCEEEEEec
Confidence 011 555543 678888899999 899888754
No 477
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=33.26 E-value=92 Score=26.21 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=15.2
Q ss_pred HHHHHHHHhcccCCCCcEEEEEee
Q 043533 214 KILKKRREAIASNGERGKVIIIDI 237 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~e~ 237 (301)
.+++.+...|+. +|+++.+..
T Consensus 163 ~l~~~~~~~~~~---~g~iv~isS 183 (291)
T 3ijr_A 163 HVTKAALSHLKQ---GDVIINTAS 183 (291)
T ss_dssp HHHHHHHTTCCT---TCEEEEECC
T ss_pred HHHHHHHHHHhh---CCEEEEEec
Confidence 677777788877 677776653
No 478
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=33.16 E-value=29 Score=26.79 Aligned_cols=30 Identities=7% Similarity=0.338 Sum_probs=25.9
Q ss_pred HHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 16 QAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 16 ~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
...|.+.|. ++++|..+||+++|+++..+.
T Consensus 5 d~~il~~L~~~~~~s~~~la~~lg~s~~tv~ 35 (162)
T 3i4p_A 5 DRKILRILQEDSTLAVADLAKKVGLSTTPCW 35 (162)
T ss_dssp HHHHHHHHTTCSCSCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHCcCHHHHH
Confidence 456788886 589999999999999998887
No 479
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=33.04 E-value=10 Score=28.19 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=34.6
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce-----------e--e--c---CCCeEEcChhcchhh
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT-----------V--N--G---QEEAYGLTAASTLLI 63 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~-----------v--e--~---~~~~y~~t~~s~~L~ 63 (301)
.++.+...|. .+++|..+||+.+++++..+. | + + ..-.+.+|+.++.+.
T Consensus 37 ~q~~vL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 104 (140)
T 3hsr_A 37 TGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIK 104 (140)
T ss_dssp HHHHHHHHSCTTCEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHH
Confidence 4566677776 478999999999999888776 2 1 1 123488888887544
No 480
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=32.93 E-value=15 Score=30.71 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=32.8
Q ss_pred HHHHhHHhcC--CCCCHHHHHHhcCCCCCCce-----------eec-CCCeEEcChhc
Q 043533 16 QAQLYKLIHG--RAITLSELVSALDIQPTKTT-----------VNG-QEEAYGLTAAS 59 (301)
Q Consensus 16 ~l~lF~~L~~--~p~t~~elA~~~~~~~~~l~-----------ve~-~~~~y~~t~~s 59 (301)
-+.|.+.|.+ +++|+.|||+++|++...+. |+. ..++|.+++..
T Consensus 10 ~l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~~~Y~lg~~~ 67 (249)
T 1mkm_A 10 AFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKL 67 (249)
T ss_dssp HHHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECTTSCEEECTHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEECCCCcEEECHHH
Confidence 4667777753 47999999999999887766 233 46789988754
No 481
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=32.76 E-value=25 Score=24.37 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=25.8
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|. .++.|..+||+.++++...+.
T Consensus 21 ~~~~il~~l~~~~~~s~~ela~~l~is~~tv~ 52 (109)
T 1sfx_A 21 SDVRIYSLLLERGGMRVSEIARELDLSARFVR 52 (109)
T ss_dssp HHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHCCCHHHHH
Confidence 3667778885 488999999999999888776
No 482
>2zcm_A Biofilm operon icaabcd HTH-type negative transcri regulator ICAR; helix-turn-helix, TETR family, repressor; 1.33A {Staphylococcus epidermidis} PDB: 2zcn_A
Probab=32.53 E-value=56 Score=24.97 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=33.3
Q ss_pred CCcCChHHHHHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 4 NQDQGAKELFQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 4 ~~~~~~~~~~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
...+.+..++.+-+.+|..=.=...|.++||+++|++...+.
T Consensus 4 ~~~~~~~~Il~aA~~lf~~~G~~~~t~~~IA~~agvs~~tlY 45 (192)
T 2zcm_A 4 HHHHMKDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLY 45 (192)
T ss_dssp ----CHHHHHHHHHHHHHHHCTTTCCHHHHHHHTTCCHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHcCcccCCHHHHHHHhCCChHHHH
Confidence 344678899999999998765467999999999999988776
No 483
>2fd5_A Transcriptional regulator; DNA-binding protein, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: a.4.1.9 a.121.1.1
Probab=32.26 E-value=25 Score=26.78 Aligned_cols=39 Identities=10% Similarity=0.015 Sum_probs=32.8
Q ss_pred CChHHHHHHHHHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 7 QGAKELFQGQAQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 7 ~~~~~~~~~~l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
..+++++.+-+.+|..-.=...|..+||+++|++...+.
T Consensus 7 ~~r~~Il~aA~~l~~~~G~~~~s~~~IA~~agvs~~tly 45 (180)
T 2fd5_A 7 QTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFY 45 (180)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGGGGG
T ss_pred cCHHHHHHHHHHHHHHhCcccCCHHHHHHHhCCCccHHH
Confidence 457788888888888755457999999999999998887
No 484
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=32.22 E-value=40 Score=29.37 Aligned_cols=52 Identities=13% Similarity=0.279 Sum_probs=34.6
Q ss_pred CCeEEEecCCccHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCC
Q 043533 150 LGSLVDVGGGNVSFSRIISEAF---PGIKCTVLDL-PHAVANLPEADNLKYIAGDML 202 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~---P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~ 202 (301)
..+||=.| |+|.++..|+++. ++.++++++. +.-........+++++.+|+.
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~ 79 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDIT 79 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccC
Confidence 35677554 6777776666542 5678999998 333222222478999999998
No 485
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=32.18 E-value=12 Score=27.88 Aligned_cols=48 Identities=8% Similarity=0.088 Sum_probs=34.4
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce-----------ee----cCC---CeEEcChhcchh
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT-----------VN----GQE---EAYGLTAASTLL 62 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~-----------ve----~~~---~~y~~t~~s~~L 62 (301)
.++.+...|. .+++|..+||+.++++...+. |+ ..+ -.+.+|+.++.+
T Consensus 32 ~q~~iL~~l~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~ 98 (145)
T 3g3z_A 32 NLFAVLYTLATEGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAY 98 (145)
T ss_dssp HHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHH
Confidence 4666777775 478999999999999888776 21 112 248888888754
No 486
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=32.18 E-value=14 Score=31.26 Aligned_cols=44 Identities=20% Similarity=0.330 Sum_probs=32.6
Q ss_pred HHHHhHHhc--CCCCCHHHHHHhcCCCCCCce-----------eecC-CCeEEcChhc
Q 043533 16 QAQLYKLIH--GRAITLSELVSALDIQPTKTT-----------VNGQ-EEAYGLTAAS 59 (301)
Q Consensus 16 ~l~lF~~L~--~~p~t~~elA~~~~~~~~~l~-----------ve~~-~~~y~~t~~s 59 (301)
-+.|.+.|. ++++|+.|||+++|++...+. |+.+ .++|.+++..
T Consensus 25 ~l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~~~~Y~lg~~~ 82 (260)
T 2o0y_A 25 VIDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRADGSYSLGPEM 82 (260)
T ss_dssp HHHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECTTSCEEECHHH
T ss_pred HHHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCCCeEEecHHH
Confidence 567778886 368999999999999887665 2222 2389998864
No 487
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=32.11 E-value=29 Score=31.87 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=23.4
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHHhcC
Q 043533 150 LGSLVDVGGGNVSFSRIISEAFPGIKCTVLDL-PHAVANL 188 (301)
Q Consensus 150 ~~~vlDvGgG~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a 188 (301)
..+|.=||+|.=....+.+-+. +.+++++|. ++.++.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDML 74 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHH
Confidence 4578888877533333322223 678999998 6655543
No 488
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=32.00 E-value=14 Score=28.94 Aligned_cols=21 Identities=10% Similarity=0.169 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHhcCCCCCCce
Q 043533 25 GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 25 ~~p~t~~elA~~~~~~~~~l~ 45 (301)
++|+|+++||+..++++..++
T Consensus 42 ~~~~s~~eIA~~~~i~~~~l~ 62 (159)
T 3lwf_A 42 DGPISLRSIAQDKNLSEHYLE 62 (159)
T ss_dssp SCCBCHHHHHHHHTCCHHHHH
T ss_pred CCCcCHHHHHHHHCcCHHHHH
Confidence 368999999999999999998
No 489
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=31.63 E-value=30 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=26.1
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.|...|. +++.|..|||+++|+++..+.
T Consensus 4 ~~~~il~~L~~~~~~~~~ela~~lg~s~~tv~ 35 (150)
T 2pn6_A 4 IDLRILKILQYNAKYSLDEIAREIRIPKATLS 35 (150)
T ss_dssp HHHHHHHHHTTCTTSCHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHCcCHHHHH
Confidence 4667888886 478999999999999988776
No 490
>1bl0_A Protein (multiple antibiotic resistance protein), DNA (5'- D(*CP*CP*GP*AP*TP*GP*CP*CP*AP*CP*GP*TP*TP*TP*TP*GP*CP*TP*AP *AP*AP*TP* CP*C)-3')...; transcriptional activator; HET: DNA; 2.30A {Escherichia coli} SCOP: a.4.1.8 a.4.1.8 PDB: 1xs9_A
Probab=31.57 E-value=16 Score=26.96 Aligned_cols=20 Identities=5% Similarity=0.051 Sum_probs=18.3
Q ss_pred CCCCHHHHHHhcCCCCCCce
Q 043533 26 RAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 26 ~p~t~~elA~~~~~~~~~l~ 45 (301)
.+.|+++||+.+|++++.+.
T Consensus 26 ~~~sl~~lA~~~~~S~~~l~ 45 (129)
T 1bl0_A 26 SPLSLEKVSERSGYSKWHLQ 45 (129)
T ss_dssp SCCCCHHHHHHSSSCHHHHH
T ss_pred CCCCHHHHHHHHCcCHHHHH
Confidence 57999999999999999887
No 491
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=31.51 E-value=23 Score=21.93 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=21.5
Q ss_pred HHHhHHhcCCCCCHHHHHHhcCCCCCCce
Q 043533 17 AQLYKLIHGRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 17 l~lF~~L~~~p~t~~elA~~~~~~~~~l~ 45 (301)
..++..+. ...|..|||+.+|+++..+.
T Consensus 4 ~~vl~l~~-~g~s~~eIA~~l~is~~tV~ 31 (61)
T 2jpc_A 4 RQVLKLID-EGYTNHGISEKLHISIKTVE 31 (61)
T ss_dssp HHHHHHHH-TSCCSHHHHHHTCSCHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHhCCCHHHHH
Confidence 45566655 35899999999999887766
No 492
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=31.50 E-value=33 Score=29.54 Aligned_cols=31 Identities=23% Similarity=0.482 Sum_probs=26.3
Q ss_pred CeEEEecCCccHHHHH--HHHHCCCCeEEEeec
Q 043533 151 GSLVDVGGGNVSFSRI--ISEAFPGIKCTVLDL 181 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~--l~~~~P~~~~~~~Dl 181 (301)
..|+=||+|.+.++.+ |+++.++.+++++|.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4699999999988877 556778999999996
No 493
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=31.49 E-value=13 Score=27.60 Aligned_cols=21 Identities=5% Similarity=0.086 Sum_probs=19.2
Q ss_pred CCCCCHHHHHHhcCCCCCCce
Q 043533 25 GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 25 ~~p~t~~elA~~~~~~~~~l~ 45 (301)
+++.|.+|||+++++++..++
T Consensus 24 ~~~~s~~ela~~~~i~~~~v~ 44 (129)
T 2y75_A 24 EGPTSLKSIAQTNNLSEHYLE 44 (129)
T ss_dssp SCCBCHHHHHHHTTSCHHHHH
T ss_pred CCcCCHHHHHHHHCcCHHHHH
Confidence 368999999999999999888
No 494
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.38 E-value=1.1e+02 Score=25.43 Aligned_cols=51 Identities=27% Similarity=0.428 Sum_probs=24.8
Q ss_pred CeEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHH-hcCCCCCCeEEEeCCCC
Q 043533 151 GSLVDVGGGNVSFSRIISEAF--PGIKCTVLDL-PHAV-ANLPEADNLKYIAGDML 202 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~~~~--P~~~~~~~Dl-p~~~-~~a~~~~ri~~~~~D~~ 202 (301)
++||=-|++.| ++.++++++ -+.++++.|+ ++.. +.+++..++.++.+|..
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 57 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVA 57 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTT
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCC
Confidence 45555555544 333333322 2567777777 3322 22233445555555654
No 495
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=31.29 E-value=13 Score=27.85 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.0
Q ss_pred HHHHHhHHhcC-CCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIHG-RAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~~-~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.++..|.. +++|..+||+.++++...+.
T Consensus 43 ~~~~iL~~l~~~~~~t~~ela~~l~~~~~tvs 74 (150)
T 2rdp_A 43 PQFVALQWLLEEGDLTVGELSNKMYLACSTTT 74 (150)
T ss_dssp HHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHCCCchhHH
Confidence 35667777753 78999999999999888776
No 496
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=31.12 E-value=20 Score=26.47 Aligned_cols=31 Identities=10% Similarity=0.266 Sum_probs=25.7
Q ss_pred HHHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 15 GQAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 15 ~~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
.++.+...|. .+++|..+||+.++++...+.
T Consensus 38 ~~~~iL~~l~~~~~~~~~ela~~l~~~~~tvs 69 (142)
T 2bv6_A 38 PQFLVLTILWDESPVNVKKVVTELALDTGTVS 69 (142)
T ss_dssp HHHHHHHHHHHSSEEEHHHHHHHTTCCTTTHH
T ss_pred HHHHHHHHHHHcCCcCHHHHHHHHCCChhhHH
Confidence 3666777775 478999999999999988887
No 497
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=30.95 E-value=8 Score=28.83 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=24.5
Q ss_pred HHHHhHHhc-CCCCCHHHHHHhcCCCCCCce
Q 043533 16 QAQLYKLIH-GRAITLSELVSALDIQPTKTT 45 (301)
Q Consensus 16 ~l~lF~~L~-~~p~t~~elA~~~~~~~~~l~ 45 (301)
++.++..|. .+++|..+||+.++++...+.
T Consensus 31 ~~~iL~~l~~~~~~t~~~la~~l~~s~~~vs 61 (144)
T 1lj9_A 31 QYLYLVRVCENPGIIQEKIAELIKVDRTTAA 61 (144)
T ss_dssp HHHHHHHHHHSTTEEHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHCcCcCHHHHHHHHCCCHhHHH
Confidence 566677775 478999999999999888776
No 498
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=30.89 E-value=13 Score=32.62 Aligned_cols=19 Identities=11% Similarity=0.216 Sum_probs=16.3
Q ss_pred HHHHHHHHhcccCCCCcEEEEE
Q 043533 214 KILKKRREAIASNGERGKVIII 235 (301)
Q Consensus 214 ~iL~~~~~aL~p~~~gg~l~i~ 235 (301)
..|++++++|+| ||.++|.
T Consensus 65 ~~l~~~~rvLk~---~G~i~i~ 83 (323)
T 1boo_A 65 SFAKVVNKKLKP---DGSFVVD 83 (323)
T ss_dssp HHHHHHHHHEEE---EEEEEEE
T ss_pred HHHHHHHHHCcC---CcEEEEE
Confidence 899999999999 7777664
No 499
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=30.75 E-value=19 Score=26.65 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=28.6
Q ss_pred CCCCCHHHHHHhcCCCCCCce-----------eecCCCeEEcChhcchh
Q 043533 25 GRAITLSELVSALDIQPTKTT-----------VNGQEEAYGLTAASTLL 62 (301)
Q Consensus 25 ~~p~t~~elA~~~~~~~~~l~-----------ve~~~~~y~~t~~s~~L 62 (301)
+++.|..+||+.++++...+. |+...+.|.+|+.+..+
T Consensus 29 ~~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~~~~~Lt~~g~~~ 77 (139)
T 2x4h_A 29 GEGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKEDGVWITNNGTRS 77 (139)
T ss_dssp TSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHH
T ss_pred CCCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecCCeEEEChhHHHH
Confidence 478999999999999888776 23333678888877643
No 500
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=30.60 E-value=76 Score=21.95 Aligned_cols=50 Identities=20% Similarity=0.122 Sum_probs=30.8
Q ss_pred CeEEEecCCccHHHHHHH---HHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC
Q 043533 151 GSLVDVGGGNVSFSRIIS---EAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMLR 203 (301)
Q Consensus 151 ~~vlDvGgG~G~~~~~l~---~~~P~~~~~~~Dl-p~~~~~a~~~~ri~~~~~D~~~ 203 (301)
.+|+=+|+ |..+..++ .+....+++++|. ++.++.+. ..++.+..+|..+
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKD 59 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTC
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCC
Confidence 47888887 54444443 3443367899998 55444433 3567777787753
Done!