Query 043535
Match_columns 881
No_of_seqs 375 out of 2956
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 06:00:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 2E-150 4E-155 1248.4 59.7 850 9-863 79-1015(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 2E-136 4E-141 1138.8 56.9 813 31-855 7-967 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-129 2E-134 1200.4 91.7 838 7-855 17-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-126 6E-131 1167.6 88.9 819 29-855 8-1046(1053)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 7E-123 2E-127 1142.0 89.4 822 28-855 17-984 (997)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3E-122 7E-127 1127.2 89.9 801 31-855 7-881 (884)
7 COG0474 MgtA Cation transport 100.0 8E-122 2E-126 1118.7 83.0 794 32-841 27-899 (917)
8 PRK15122 magnesium-transportin 100.0 9E-119 2E-123 1090.4 87.3 791 31-854 30-895 (903)
9 PRK10517 magnesium-transportin 100.0 5E-118 1E-122 1081.5 85.1 787 32-854 53-895 (902)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-116 2E-121 1072.0 87.4 785 32-854 19-860 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-116 4E-121 1079.2 84.3 769 79-855 1-917 (917)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 6E-113 1E-117 948.3 38.8 843 12-863 25-1013(1019)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1E-108 2E-113 1022.9 75.5 751 45-830 137-1045(1054)
14 TIGR01647 ATPase-IIIA_H plasma 100.0 5E-107 1E-111 975.6 78.5 713 47-815 1-752 (755)
15 TIGR01652 ATPase-Plipid phosph 100.0 4.8E-98 1E-102 930.9 69.3 765 62-855 1-1045(1057)
16 PLN03190 aminophospholipid tra 100.0 2.5E-93 5.3E-98 877.7 73.9 768 60-855 85-1140(1178)
17 KOG0208 Cation transport ATPas 100.0 8.1E-94 1.8E-98 807.4 54.5 772 45-850 158-1116(1140)
18 KOG0210 P-type ATPase [Inorgan 100.0 3.1E-87 6.6E-92 724.5 42.1 768 57-862 74-1046(1051)
19 PRK14010 potassium-transportin 100.0 2.3E-81 5E-86 727.5 54.3 524 80-676 27-586 (673)
20 KOG0205 Plasma membrane H+-tra 100.0 1.8E-82 4E-87 684.5 34.4 630 28-699 18-689 (942)
21 PRK01122 potassium-transportin 100.0 6.2E-79 1.3E-83 707.9 59.2 516 80-664 28-578 (679)
22 KOG0206 P-type ATPase [General 100.0 6.7E-82 1.5E-86 748.2 34.7 676 58-751 28-961 (1151)
23 TIGR01497 kdpB K+-transporting 100.0 1.7E-75 3.7E-80 677.4 57.7 519 80-667 27-582 (675)
24 KOG0209 P-type ATPase [Inorgan 100.0 5.7E-75 1.2E-79 640.3 45.7 786 32-854 149-1148(1160)
25 COG2217 ZntA Cation transport 100.0 2.8E-72 6E-77 651.4 53.0 456 137-676 210-682 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 4.7E-68 1E-72 635.9 56.8 476 112-676 215-711 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 2.3E-67 4.9E-72 610.9 51.0 459 111-677 8-485 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.3E-66 2.9E-71 609.8 50.2 505 91-676 5-530 (556)
29 KOG0207 Cation transport ATPas 100.0 1.3E-67 2.9E-72 596.6 35.4 515 117-707 352-901 (951)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.3E-65 2.9E-70 597.4 51.2 488 90-676 4-509 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 8.8E-65 1.9E-69 592.3 55.2 471 118-677 69-550 (562)
32 PRK10671 copA copper exporting 100.0 1E-63 2.2E-68 610.9 57.0 461 131-674 314-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 3.6E-54 7.9E-59 456.3 34.4 470 115-653 82-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 5.5E-28 1.2E-32 253.1 22.8 201 111-313 4-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 3.3E-22 7.2E-27 207.0 11.1 97 499-612 115-215 (215)
36 PF00689 Cation_ATPase_C: Cati 99.9 1.9E-21 4.1E-26 195.8 15.9 171 682-853 1-182 (182)
37 KOG4383 Uncharacterized conser 99.9 7E-19 1.5E-23 192.0 36.4 267 436-704 698-1135(1354)
38 COG4087 Soluble P-type ATPase 99.5 3E-14 6.4E-19 126.2 10.4 125 500-644 19-145 (152)
39 PF13246 Hydrolase_like2: Puta 99.4 5.4E-13 1.2E-17 116.9 8.0 87 356-447 2-90 (91)
40 PF00690 Cation_ATPase_N: Cati 99.3 4.3E-12 9.4E-17 105.2 6.9 68 29-98 2-69 (69)
41 PRK01158 phosphoglycolate phos 99.3 1.6E-11 3.5E-16 128.5 12.9 137 509-646 17-226 (230)
42 PRK10513 sugar phosphate phosp 99.3 1.2E-11 2.6E-16 132.8 12.1 67 580-647 196-266 (270)
43 PRK15126 thiamin pyrimidine py 99.3 1.3E-11 2.9E-16 132.6 11.7 135 511-646 19-259 (272)
44 PRK10976 putative hydrolase; P 99.3 1.8E-11 3.9E-16 131.2 12.5 135 511-646 19-261 (266)
45 COG0561 Cof Predicted hydrolas 99.3 2E-11 4.3E-16 130.7 12.5 143 504-647 12-259 (264)
46 TIGR01487 SPP-like sucrose-pho 99.3 2.3E-11 4.9E-16 125.9 11.3 133 511-644 18-214 (215)
47 TIGR01482 SPP-subfamily Sucros 99.2 6.8E-11 1.5E-15 123.3 12.2 135 511-646 15-222 (225)
48 PLN02887 hydrolase family prot 99.2 9.9E-11 2.1E-15 135.8 12.4 67 580-647 507-577 (580)
49 PF08282 Hydrolase_3: haloacid 99.2 9.5E-11 2.1E-15 124.1 11.4 136 509-645 13-254 (254)
50 PRK10530 pyridoxal phosphate ( 99.2 2.3E-10 4.9E-15 123.1 12.9 66 580-646 199-268 (272)
51 PRK11133 serB phosphoserine ph 99.1 3.2E-10 6.9E-15 123.1 11.2 131 511-646 181-316 (322)
52 smart00831 Cation_ATPase_N Cat 99.1 1.6E-10 3.4E-15 94.4 6.6 62 39-102 2-63 (64)
53 TIGR02137 HSK-PSP phosphoserin 99.1 6.4E-10 1.4E-14 113.1 11.9 130 511-648 68-198 (203)
54 TIGR02726 phenyl_P_delta pheny 99.0 1.2E-09 2.7E-14 107.1 10.1 104 518-641 41-146 (169)
55 TIGR00099 Cof-subfamily Cof su 99.0 1.6E-09 3.4E-14 115.4 10.7 133 511-644 16-255 (256)
56 TIGR01486 HAD-SF-IIB-MPGP mann 98.9 6.3E-09 1.4E-13 110.7 13.2 135 512-647 17-254 (256)
57 TIGR01670 YrbI-phosphatas 3-de 98.9 4.1E-09 9E-14 102.6 10.2 103 519-643 36-143 (154)
58 PRK03669 mannosyl-3-phosphogly 98.9 6.6E-09 1.4E-13 111.5 12.1 136 511-647 24-266 (271)
59 TIGR00338 serB phosphoserine p 98.8 1.1E-08 2.4E-13 106.2 10.4 128 511-644 85-218 (219)
60 COG0560 SerB Phosphoserine pho 98.8 5.3E-09 1.2E-13 106.9 7.1 122 510-635 76-201 (212)
61 PRK00192 mannosyl-3-phosphogly 98.8 3.6E-08 7.7E-13 106.0 12.5 136 510-646 20-267 (273)
62 PRK09484 3-deoxy-D-manno-octul 98.7 3.2E-08 6.9E-13 99.4 9.5 98 518-637 55-156 (183)
63 COG1778 Low specificity phosph 98.7 3.2E-08 7E-13 91.7 8.6 113 519-653 43-163 (170)
64 TIGR02471 sucr_syn_bact_C sucr 98.6 1.1E-07 2.4E-12 99.9 9.7 67 580-647 159-233 (236)
65 TIGR01485 SPP_plant-cyano sucr 98.6 2.3E-07 5E-12 98.3 10.2 138 509-647 19-245 (249)
66 PRK13582 thrH phosphoserine ph 98.5 5E-07 1.1E-11 92.7 11.7 126 511-646 68-196 (205)
67 PRK08238 hypothetical protein; 98.5 3.7E-05 8.1E-10 88.2 27.2 94 511-618 72-165 (479)
68 KOG1615 Phosphoserine phosphat 98.5 2.7E-07 5.9E-12 88.5 6.8 107 511-620 88-201 (227)
69 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 6.7E-07 1.5E-11 91.3 9.7 116 511-630 80-200 (201)
70 PLN02382 probable sucrose-phos 98.4 1.3E-06 2.7E-11 98.8 10.3 135 512-647 29-258 (413)
71 PLN02954 phosphoserine phospha 98.2 1.1E-05 2.3E-10 84.1 12.0 123 511-643 84-221 (224)
72 TIGR03333 salvage_mtnX 2-hydro 98.2 1.1E-05 2.5E-10 83.2 11.1 133 510-646 69-209 (214)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 8.5E-06 1.8E-10 83.3 9.5 107 509-618 85-197 (202)
74 TIGR02461 osmo_MPG_phos mannos 98.1 2E-05 4.3E-10 81.9 12.2 44 509-552 13-56 (225)
75 TIGR01488 HAD-SF-IB Haloacid D 98.1 6.2E-06 1.3E-10 82.3 7.4 95 512-611 74-177 (177)
76 PF12710 HAD: haloacid dehalog 98.1 7.9E-06 1.7E-10 82.7 8.1 92 514-609 92-192 (192)
77 TIGR02463 MPGP_rel mannosyl-3- 98.1 2E-05 4.3E-10 81.9 10.9 40 512-551 17-56 (221)
78 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2E-05 4.4E-10 81.7 9.2 97 511-616 74-184 (219)
79 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2E-05 4.4E-10 79.4 8.4 106 510-616 71-186 (188)
80 PRK14502 bifunctional mannosyl 98.0 5.9E-05 1.3E-09 87.9 12.9 40 512-551 434-473 (694)
81 PRK13222 phosphoglycolate phos 98.0 5.3E-05 1.1E-09 78.9 11.4 126 510-647 92-223 (226)
82 PRK12702 mannosyl-3-phosphogly 98.0 2.8E-05 6.1E-10 81.6 9.1 44 510-553 17-60 (302)
83 PRK10187 trehalose-6-phosphate 97.9 5.5E-05 1.2E-09 80.7 11.4 128 511-645 36-240 (266)
84 PTZ00174 phosphomannomutase; P 97.9 3.2E-05 6.9E-10 81.7 9.1 52 580-632 188-244 (247)
85 cd01427 HAD_like Haloacid deha 97.9 4E-05 8.6E-10 72.2 8.8 109 508-616 21-138 (139)
86 COG0546 Gph Predicted phosphat 97.9 3.7E-05 8.1E-10 79.7 9.0 120 509-645 87-217 (220)
87 PF05116 S6PP: Sucrose-6F-phos 97.8 7.8E-05 1.7E-09 78.6 9.2 68 579-647 164-244 (247)
88 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.00017 3.8E-09 73.9 10.9 123 511-644 75-202 (205)
89 PRK13288 pyrophosphatase PpaX; 97.6 0.00032 7E-09 72.4 10.6 119 511-645 82-210 (214)
90 TIGR01484 HAD-SF-IIB HAD-super 97.6 0.00022 4.7E-09 73.0 8.9 39 511-549 17-55 (204)
91 PRK14501 putative bifunctional 97.5 0.00043 9.3E-09 84.8 11.8 129 511-646 514-721 (726)
92 PRK13223 phosphoglycolate phos 97.5 0.00048 1E-08 73.8 10.7 120 510-645 100-229 (272)
93 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00038 8.2E-09 71.7 9.3 115 511-642 85-210 (213)
94 COG4030 Uncharacterized protei 97.3 0.0025 5.4E-08 63.1 11.9 133 511-646 83-262 (315)
95 PRK11590 hypothetical protein; 97.3 0.002 4.2E-08 66.4 11.5 100 511-618 95-202 (211)
96 TIGR01545 YfhB_g-proteo haloac 97.3 0.0017 3.6E-08 66.7 10.8 100 511-618 94-201 (210)
97 PRK10826 2-deoxyglucose-6-phos 97.3 0.001 2.2E-08 69.1 9.2 110 510-635 91-211 (222)
98 PRK13225 phosphoglycolate phos 97.2 0.0022 4.9E-08 68.6 10.9 118 511-645 142-267 (273)
99 PLN02770 haloacid dehalogenase 97.1 0.0025 5.5E-08 67.4 10.6 113 511-637 108-229 (248)
100 TIGR01672 AphA HAD superfamily 97.1 0.0011 2.3E-08 69.0 7.0 88 511-614 114-206 (237)
101 COG3769 Predicted hydrolase (H 97.1 0.0048 1E-07 61.0 11.0 38 515-552 27-64 (274)
102 TIGR01544 HAD-SF-IE haloacid d 97.1 0.0019 4.1E-08 68.2 8.9 127 510-645 120-273 (277)
103 PRK13226 phosphoglycolate phos 97.1 0.003 6.4E-08 66.0 10.4 123 511-644 95-223 (229)
104 smart00775 LNS2 LNS2 domain. T 97.1 0.0033 7.2E-08 61.2 9.7 104 509-614 25-141 (157)
105 PRK11009 aphA acid phosphatase 97.0 0.0017 3.7E-08 67.4 7.3 87 511-614 114-206 (237)
106 TIGR03351 PhnX-like phosphonat 97.0 0.004 8.8E-08 64.4 10.0 121 510-642 86-216 (220)
107 PLN03243 haloacid dehalogenase 97.0 0.0034 7.5E-08 66.7 9.6 116 511-635 109-226 (260)
108 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0014 3.1E-08 66.6 6.1 94 509-611 104-197 (197)
109 PHA02530 pseT polynucleotide k 96.9 0.0022 4.8E-08 69.9 7.7 107 508-615 184-292 (300)
110 PRK06769 hypothetical protein; 96.8 0.0041 9E-08 61.8 8.2 98 512-616 29-134 (173)
111 PRK13478 phosphonoacetaldehyde 96.8 0.0079 1.7E-07 64.4 10.8 90 511-613 101-197 (267)
112 TIGR01422 phosphonatase phosph 96.8 0.0075 1.6E-07 64.0 10.5 96 511-614 99-196 (253)
113 TIGR01662 HAD-SF-IIIA HAD-supe 96.7 0.0083 1.8E-07 56.6 9.4 92 511-614 25-126 (132)
114 PRK11587 putative phosphatase; 96.7 0.0077 1.7E-07 62.3 9.9 114 511-635 83-199 (218)
115 PLN02575 haloacid dehalogenase 96.6 0.012 2.7E-07 65.2 10.9 110 511-635 216-333 (381)
116 PRK06698 bifunctional 5'-methy 96.6 0.0093 2E-07 69.1 10.0 123 511-646 330-454 (459)
117 TIGR02253 CTE7 HAD superfamily 96.5 0.0093 2E-07 61.7 8.8 94 511-618 94-195 (221)
118 TIGR01428 HAD_type_II 2-haloal 96.5 0.0099 2.1E-07 60.4 8.7 96 511-615 92-188 (198)
119 PRK08942 D,D-heptose 1,7-bisph 96.4 0.022 4.8E-07 57.0 10.7 115 511-645 29-176 (181)
120 TIGR01685 MDP-1 magnesium-depe 96.3 0.017 3.8E-07 57.0 8.9 112 502-618 36-156 (174)
121 COG4359 Uncharacterized conser 96.3 0.0084 1.8E-07 57.7 6.3 105 511-617 73-184 (220)
122 PLN02580 trehalose-phosphatase 96.2 0.029 6.2E-07 62.2 10.8 62 580-646 301-374 (384)
123 PRK14988 GMP/IMP nucleotidase; 96.2 0.011 2.4E-07 61.3 7.2 94 511-618 93-194 (224)
124 PLN02205 alpha,alpha-trehalose 96.1 0.016 3.5E-07 71.4 9.1 50 499-548 604-654 (854)
125 PLN02779 haloacid dehalogenase 96.1 0.024 5.2E-07 61.2 9.2 117 511-635 144-264 (286)
126 TIGR01668 YqeG_hyp_ppase HAD s 96.1 0.02 4.3E-07 56.7 7.8 85 511-614 43-131 (170)
127 TIGR02009 PGMB-YQAB-SF beta-ph 96.0 0.012 2.7E-07 58.9 6.4 87 511-614 88-181 (185)
128 TIGR01990 bPGM beta-phosphoglu 95.9 0.013 2.9E-07 58.6 6.1 93 511-614 87-180 (185)
129 PF13419 HAD_2: Haloacid dehal 95.9 0.013 2.8E-07 57.7 5.6 92 510-615 76-173 (176)
130 TIGR01509 HAD-SF-IA-v3 haloaci 95.8 0.038 8.2E-07 55.1 9.0 89 511-614 85-179 (183)
131 TIGR01656 Histidinol-ppas hist 95.8 0.027 5.9E-07 54.2 7.5 90 511-616 27-142 (147)
132 TIGR01533 lipo_e_P4 5'-nucleot 95.7 0.041 8.8E-07 58.2 8.5 86 509-608 116-204 (266)
133 PRK09449 dUMP phosphatase; Pro 95.7 0.053 1.1E-06 56.2 9.4 118 511-645 95-222 (224)
134 TIGR02254 YjjG/YfnB HAD superf 95.6 0.037 8E-07 57.3 7.9 114 511-642 97-221 (224)
135 TIGR00213 GmhB_yaeD D,D-heptos 95.6 0.058 1.2E-06 53.7 8.9 122 512-635 27-170 (176)
136 PLN02940 riboflavin kinase 95.6 0.038 8.3E-07 62.2 8.5 114 511-634 93-211 (382)
137 TIGR01261 hisB_Nterm histidino 95.4 0.036 7.7E-07 54.3 6.6 90 511-616 29-144 (161)
138 COG2179 Predicted hydrolase of 95.4 0.05 1.1E-06 52.0 7.0 110 470-613 20-132 (175)
139 PLN03017 trehalose-phosphatase 95.2 0.25 5.5E-06 54.4 13.1 46 499-545 119-166 (366)
140 PF06888 Put_Phosphatase: Puta 95.2 0.084 1.8E-06 54.7 8.7 102 511-613 71-193 (234)
141 TIGR01549 HAD-SF-IA-v1 haloaci 95.2 0.025 5.3E-07 54.8 4.6 91 511-612 64-154 (154)
142 PLN02423 phosphomannomutase 95.1 0.082 1.8E-06 55.7 8.6 38 580-618 189-231 (245)
143 TIGR02252 DREG-2 REG-2-like, H 95.0 0.065 1.4E-06 54.6 7.5 94 511-614 105-200 (203)
144 smart00577 CPDc catalytic doma 95.0 0.017 3.8E-07 55.7 2.9 92 510-616 44-139 (148)
145 TIGR01675 plant-AP plant acid 94.9 0.12 2.6E-06 53.2 8.7 80 510-605 119-209 (229)
146 TIGR01691 enolase-ppase 2,3-di 94.9 0.077 1.7E-06 54.7 7.4 98 509-616 93-193 (220)
147 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.8 0.26 5.7E-06 51.8 11.6 95 504-613 17-116 (242)
148 TIGR01681 HAD-SF-IIIC HAD-supe 94.7 0.089 1.9E-06 49.3 6.9 86 511-610 29-126 (128)
149 PLN02811 hydrolase 94.7 0.11 2.3E-06 53.8 8.2 91 511-615 78-180 (220)
150 PLN02919 haloacid dehalogenase 94.4 0.12 2.6E-06 65.7 9.2 124 511-648 161-294 (1057)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 94.3 0.14 3.1E-06 50.3 7.6 88 512-615 43-158 (166)
152 PF13344 Hydrolase_6: Haloacid 94.0 0.14 3.1E-06 45.7 6.3 89 504-613 7-100 (101)
153 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.0 0.51 1.1E-05 50.1 11.5 49 504-552 10-65 (257)
154 TIGR01686 FkbH FkbH-like domai 93.9 0.14 3.1E-06 56.2 7.4 91 511-618 31-129 (320)
155 PRK05446 imidazole glycerol-ph 93.8 0.19 4.2E-06 55.4 8.2 90 511-616 30-145 (354)
156 TIGR00685 T6PP trehalose-phosp 93.7 0.081 1.8E-06 55.7 4.9 67 574-645 161-239 (244)
157 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.5 0.51 1.1E-05 49.9 10.5 50 504-553 10-62 (249)
158 PF09419 PGP_phosphatase: Mito 93.4 0.27 5.9E-06 48.1 7.5 86 509-612 57-157 (168)
159 PF08235 LNS2: LNS2 (Lipin/Ned 93.1 0.55 1.2E-05 45.3 8.8 103 510-614 26-141 (157)
160 PRK10444 UMP phosphatase; Prov 93.0 0.49 1.1E-05 49.9 9.4 48 504-551 10-60 (248)
161 KOG3120 Predicted haloacid deh 92.8 0.25 5.4E-06 49.4 6.3 137 464-622 57-213 (256)
162 TIGR02247 HAD-1A3-hyp Epoxide 92.4 0.16 3.5E-06 52.1 4.8 94 510-618 93-196 (211)
163 PRK10563 6-phosphogluconate ph 92.2 0.21 4.5E-06 51.7 5.3 91 511-617 88-184 (221)
164 PLN02645 phosphoglycolate phos 91.8 0.42 9.2E-06 52.3 7.4 95 504-616 37-135 (311)
165 TIGR01993 Pyr-5-nucltdase pyri 91.2 0.62 1.3E-05 46.5 7.3 87 511-615 84-181 (184)
166 PLN02151 trehalose-phosphatase 90.9 1.7 3.6E-05 47.9 10.7 47 499-546 106-154 (354)
167 PRK09456 ?-D-glucose-1-phospha 90.9 0.59 1.3E-05 47.4 6.9 91 511-615 84-181 (199)
168 TIGR01689 EcbF-BcbF capsule bi 90.4 0.96 2.1E-05 42.1 7.1 32 510-541 23-54 (126)
169 KOG3040 Predicted sugar phosph 90.3 1.6 3.4E-05 43.4 8.7 52 501-552 13-67 (262)
170 PHA02597 30.2 hypothetical pro 89.8 0.74 1.6E-05 46.6 6.6 93 511-615 74-170 (197)
171 PRK10725 fructose-1-P/6-phosph 89.1 0.95 2.1E-05 45.3 6.7 91 513-614 90-181 (188)
172 PF02358 Trehalose_PPase: Treh 88.6 1.3 2.9E-05 46.2 7.6 59 577-635 162-233 (235)
173 PLN02177 glycerol-3-phosphate 88.5 3.2 7E-05 48.2 11.2 94 512-618 111-214 (497)
174 TIGR01452 PGP_euk phosphoglyco 88.4 5.5 0.00012 42.8 12.4 92 504-616 11-108 (279)
175 COG3700 AphA Acid phosphatase 87.8 0.95 2.1E-05 43.6 5.1 90 512-617 115-210 (237)
176 COG0637 Predicted phosphatase/ 85.9 3 6.5E-05 43.1 8.2 97 510-615 85-182 (221)
177 PF03767 Acid_phosphat_B: HAD 85.6 0.9 1.9E-05 47.2 4.1 82 510-607 114-207 (229)
178 TIGR01680 Veg_Stor_Prot vegeta 84.8 4.2 9.1E-05 42.9 8.6 80 509-605 143-235 (275)
179 COG0241 HisB Histidinol phosph 84.6 2.7 5.8E-05 41.6 6.7 92 512-614 32-144 (181)
180 TIGR01684 viral_ppase viral ph 84.4 1.7 3.7E-05 46.2 5.6 41 512-552 146-187 (301)
181 TIGR01663 PNK-3'Pase polynucle 80.4 4.1 8.8E-05 47.6 7.2 40 512-551 198-249 (526)
182 COG0647 NagD Predicted sugar p 80.1 13 0.00027 39.6 10.1 109 503-637 16-130 (269)
183 PHA03398 viral phosphatase sup 79.9 3.2 7E-05 44.2 5.6 41 512-552 148-189 (303)
184 PRK14194 bifunctional 5,10-met 79.6 11 0.00023 40.7 9.5 55 582-636 144-210 (301)
185 TIGR02251 HIF-SF_euk Dullard-l 78.9 0.94 2E-05 44.4 1.2 92 510-616 41-136 (162)
186 PRK10748 flavin mononucleotide 78.4 3.1 6.7E-05 43.5 5.1 87 511-617 113-206 (238)
187 TIGR01460 HAD-SF-IIA Haloacid 76.0 18 0.00039 37.7 10.0 48 504-551 7-58 (236)
188 PF06570 DUF1129: Protein of u 74.8 67 0.0015 32.7 13.5 16 834-849 181-196 (206)
189 COG1011 Predicted hydrolase (H 73.7 11 0.00024 38.7 7.7 97 511-618 99-199 (229)
190 COG1877 OtsB Trehalose-6-phosp 73.4 16 0.00035 38.7 8.7 44 507-550 36-80 (266)
191 TIGR01493 HAD-SF-IA-v2 Haloaci 72.6 6.2 0.00013 38.8 5.2 84 511-610 90-174 (175)
192 PRK14188 bifunctional 5,10-met 72.1 21 0.00045 38.6 9.3 54 582-635 143-208 (296)
193 PRK14179 bifunctional 5,10-met 68.5 22 0.00047 38.1 8.4 54 582-635 143-208 (284)
194 PF05822 UMPH-1: Pyrimidine 5' 68.3 2 4.2E-05 44.7 0.5 131 510-645 89-241 (246)
195 PRK14170 bifunctional 5,10-met 66.1 31 0.00067 36.9 8.9 45 509-553 11-64 (284)
196 PRK14169 bifunctional 5,10-met 65.6 39 0.00085 36.1 9.6 44 510-553 11-63 (282)
197 TIGR02244 HAD-IG-Ncltidse HAD 64.4 18 0.00038 40.0 7.0 37 513-549 186-223 (343)
198 PRK14182 bifunctional 5,10-met 64.2 40 0.00086 36.1 9.3 45 509-553 10-63 (282)
199 PRK14174 bifunctional 5,10-met 64.2 34 0.00073 36.9 8.9 57 576-636 141-214 (295)
200 PRK14189 bifunctional 5,10-met 62.8 31 0.00067 37.0 8.2 56 581-636 142-209 (285)
201 TIGR01456 CECR5 HAD-superfamil 61.5 39 0.00084 37.1 9.1 90 504-614 9-106 (321)
202 PRK14191 bifunctional 5,10-met 61.1 43 0.00093 35.9 8.9 60 576-636 139-208 (285)
203 COG2503 Predicted secreted aci 59.7 32 0.0007 35.4 7.2 86 511-610 122-211 (274)
204 PRK14166 bifunctional 5,10-met 59.3 50 0.0011 35.3 9.0 56 581-636 141-208 (282)
205 COG1916 Uncharacterized homolo 59.3 1.4E+02 0.0031 32.8 12.3 41 511-551 96-136 (388)
206 PRK14190 bifunctional 5,10-met 58.9 54 0.0012 35.2 9.2 44 509-552 12-64 (284)
207 PRK14184 bifunctional 5,10-met 58.5 56 0.0012 35.1 9.2 54 582-636 142-212 (286)
208 PRK14172 bifunctional 5,10-met 58.4 60 0.0013 34.7 9.4 63 574-636 138-209 (278)
209 PRK14167 bifunctional 5,10-met 57.8 57 0.0012 35.2 9.2 45 509-553 11-64 (297)
210 PRK14175 bifunctional 5,10-met 57.4 43 0.00092 36.0 8.2 44 509-552 12-64 (286)
211 PF12689 Acid_PPase: Acid Phos 54.0 36 0.00078 33.5 6.4 97 511-616 45-146 (169)
212 TIGR01459 HAD-SF-IIA-hyp4 HAD- 53.5 13 0.00027 39.0 3.5 92 513-615 140-237 (242)
213 PF13242 Hydrolase_like: HAD-h 52.8 20 0.00044 29.7 4.0 57 578-635 7-71 (75)
214 PRK14186 bifunctional 5,10-met 52.4 90 0.002 33.7 9.6 54 582-635 143-208 (297)
215 PRK14177 bifunctional 5,10-met 50.2 97 0.0021 33.2 9.4 74 573-649 138-225 (284)
216 TIGR02230 ATPase_gene1 F0F1-AT 50.1 60 0.0013 28.8 6.5 61 795-855 38-98 (100)
217 PRK14178 bifunctional 5,10-met 48.5 94 0.002 33.2 9.0 63 573-636 131-203 (279)
218 PRK14193 bifunctional 5,10-met 47.9 94 0.002 33.3 8.9 43 510-552 13-64 (284)
219 PTZ00445 p36-lilke protein; Pr 47.7 23 0.00049 36.0 4.0 65 463-540 28-104 (219)
220 PLN02897 tetrahydrofolate dehy 46.8 1.3E+02 0.0029 33.1 9.9 57 580-636 197-265 (345)
221 PRK10792 bifunctional 5,10-met 46.1 84 0.0018 33.7 8.2 62 575-636 140-210 (285)
222 PRK14183 bifunctional 5,10-met 45.3 1.1E+02 0.0024 32.8 8.9 55 582-636 142-208 (281)
223 PLN03063 alpha,alpha-trehalose 45.0 1.1E+02 0.0025 38.1 10.4 38 512-549 533-571 (797)
224 TIGR01106 ATPase-IIC_X-K sodiu 43.7 4.2E+02 0.0091 34.2 15.4 85 99-184 104-199 (997)
225 TIGR01647 ATPase-IIIA_H plasma 43.4 2.8E+02 0.0061 34.5 13.4 25 157-181 98-122 (755)
226 PRK14187 bifunctional 5,10-met 43.4 1.2E+02 0.0026 32.7 8.9 54 582-635 145-210 (294)
227 PRK11507 ribosome-associated p 43.1 26 0.00057 28.8 2.9 26 141-166 38-63 (70)
228 PF13380 CoA_binding_2: CoA bi 42.4 26 0.00057 32.0 3.3 40 512-551 64-104 (116)
229 PF06506 PrpR_N: Propionate ca 42.0 98 0.0021 30.5 7.6 127 508-656 14-171 (176)
230 PRK14171 bifunctional 5,10-met 41.4 99 0.0021 33.2 7.8 61 573-636 138-210 (288)
231 PF13275 S4_2: S4 domain; PDB: 40.8 15 0.00032 29.8 1.2 27 141-168 34-60 (65)
232 PF00122 E1-E2_ATPase: E1-E2 A 40.6 2.7E+02 0.0058 28.5 11.1 60 108-167 5-76 (230)
233 PLN03064 alpha,alpha-trehalose 39.8 1.5E+02 0.0032 37.5 10.1 39 512-550 623-662 (934)
234 TIGR00216 ispH_lytB (E)-4-hydr 39.5 2.2E+02 0.0048 30.5 10.1 164 434-619 73-263 (280)
235 PLN02616 tetrahydrofolate dehy 39.1 1.7E+02 0.0037 32.4 9.3 60 573-635 210-281 (364)
236 TIGR01501 MthylAspMutase methy 39.0 58 0.0013 30.7 5.1 82 471-552 23-113 (134)
237 TIGR01452 PGP_euk phosphoglyco 38.6 34 0.00073 36.7 4.0 92 513-614 145-242 (279)
238 TIGR02250 FCP1_euk FCP1-like p 37.6 49 0.0011 32.1 4.5 43 509-552 56-98 (156)
239 PF03120 DNA_ligase_OB: NAD-de 37.6 18 0.0004 30.8 1.3 22 151-172 45-67 (82)
240 PRK14185 bifunctional 5,10-met 37.2 94 0.002 33.5 6.9 43 510-552 11-63 (293)
241 PF12710 HAD: haloacid dehalog 36.9 16 0.00034 36.3 1.0 14 320-333 1-14 (192)
242 KOG3128 Uncharacterized conser 35.5 1.1E+02 0.0023 32.0 6.5 130 512-643 139-288 (298)
243 PF00389 2-Hacid_dh: D-isomer 35.5 86 0.0019 29.2 5.8 85 508-618 3-89 (133)
244 KOG3085 Predicted hydrolase (H 35.2 1.1E+02 0.0024 31.9 6.8 104 512-627 114-221 (237)
245 CHL00200 trpA tryptophan synth 35.2 2.2E+02 0.0047 30.3 9.3 91 509-618 126-231 (263)
246 PF15584 Imm44: Immunity prote 34.9 18 0.00039 31.1 0.9 19 158-176 13-31 (94)
247 PRK14176 bifunctional 5,10-met 34.0 75 0.0016 34.1 5.5 60 575-634 145-213 (287)
248 PF01455 HupF_HypC: HupF/HypC 33.4 93 0.002 25.5 4.8 32 137-168 16-50 (68)
249 PRK15108 biotin synthase; Prov 32.9 4.3E+02 0.0093 29.3 11.6 84 514-604 111-199 (345)
250 COG1188 Ribosome-associated he 31.4 52 0.0011 29.1 3.1 35 142-178 36-70 (100)
251 PLN03190 aminophospholipid tra 31.2 1.3E+03 0.029 30.2 18.5 92 74-166 106-212 (1178)
252 PLN02516 methylenetetrahydrofo 30.5 2.6E+02 0.0056 30.3 8.9 54 582-635 152-217 (299)
253 PLN02591 tryptophan synthase 30.0 3.3E+02 0.0071 28.7 9.5 90 510-618 114-218 (250)
254 PRK14173 bifunctional 5,10-met 29.8 2.5E+02 0.0054 30.2 8.6 63 573-635 134-205 (287)
255 PRK10517 magnesium-transportin 29.6 1.1E+03 0.023 30.1 15.6 111 73-184 95-223 (902)
256 COG0272 Lig NAD-dependent DNA 29.2 85 0.0018 37.5 5.4 76 151-233 363-440 (667)
257 PF06609 TRI12: Fungal trichot 29.1 1.1E+03 0.023 28.4 14.9 15 840-854 363-377 (599)
258 cd05017 SIS_PGI_PMI_1 The memb 28.7 98 0.0021 28.2 4.8 38 512-551 55-92 (119)
259 cd00860 ThrRS_anticodon ThrRS 28.4 98 0.0021 26.2 4.5 47 506-552 7-54 (91)
260 PRK14168 bifunctional 5,10-met 28.4 1.5E+02 0.0032 32.1 6.6 57 578-635 142-215 (297)
261 TIGR01522 ATPase-IIA2_Ca golgi 28.1 6.7E+02 0.015 31.8 13.6 62 109-181 86-147 (884)
262 PRK02261 methylaspartate mutas 28.0 1.6E+02 0.0034 27.8 6.2 82 471-552 25-115 (137)
263 PRK01045 ispH 4-hydroxy-3-meth 28.0 3.3E+02 0.0072 29.5 9.2 163 434-618 73-264 (298)
264 COG0078 ArgF Ornithine carbamo 27.7 5.2E+02 0.011 27.9 10.3 84 512-615 88-178 (310)
265 PRK05265 pyridoxine 5'-phospha 27.5 1.8E+02 0.0038 30.2 6.7 39 513-552 112-150 (239)
266 TIGR03849 arch_ComA phosphosul 26.7 2.1E+02 0.0046 29.7 7.1 69 513-597 40-118 (237)
267 TIGR02468 sucrsPsyn_pln sucros 26.5 2.7E+02 0.0059 35.6 9.3 36 516-551 789-828 (1050)
268 PF02401 LYTB: LytB protein; 25.9 1E+02 0.0023 33.0 5.0 162 435-619 72-264 (281)
269 PF14336 DUF4392: Domain of un 25.6 56 0.0012 35.3 2.9 40 513-552 62-102 (291)
270 TIGR01512 ATPase-IB2_Cd heavy 25.1 6.8E+02 0.015 29.6 12.2 208 105-320 24-265 (536)
271 PRK14192 bifunctional 5,10-met 25.1 2E+02 0.0043 31.0 7.0 44 509-552 12-65 (283)
272 TIGR00640 acid_CoA_mut_C methy 25.0 1.2E+02 0.0026 28.5 4.7 82 471-552 24-108 (132)
273 PRK15122 magnesium-transportin 24.8 6.8E+02 0.015 31.8 12.7 82 100-182 112-210 (903)
274 PF06941 NT5C: 5' nucleotidase 24.7 59 0.0013 32.5 2.8 29 511-539 73-101 (191)
275 COG0279 GmhA Phosphoheptose is 24.2 1.1E+02 0.0025 29.7 4.3 33 513-545 122-154 (176)
276 PRK04980 hypothetical protein; 24.1 82 0.0018 28.1 3.1 44 138-186 19-64 (102)
277 PRK08508 biotin synthase; Prov 23.8 5.4E+02 0.012 27.5 10.1 89 510-603 71-164 (279)
278 TIGR01524 ATPase-IIIB_Mg magne 23.5 1.2E+03 0.026 29.5 14.5 111 73-184 61-189 (867)
279 cd01994 Alpha_ANH_like_IV This 23.5 3.4E+02 0.0073 27.3 7.9 38 515-552 11-61 (194)
280 TIGR02988 YaaA_near_RecF S4 do 23.3 1.1E+02 0.0025 23.9 3.6 27 136-164 32-58 (59)
281 KOG2882 p-Nitrophenyl phosphat 23.2 1.2E+02 0.0025 32.6 4.6 48 504-551 31-81 (306)
282 TIGR01523 ATPase-IID_K-Na pota 22.9 2.8E+02 0.006 35.9 8.8 83 99-182 81-174 (1053)
283 COG0309 HypE Hydrogenase matur 22.7 3.2E+02 0.0068 30.0 7.8 85 505-600 219-307 (339)
284 TIGR01525 ATPase-IB_hvy heavy 22.7 1.3E+03 0.029 27.3 16.3 208 104-319 23-264 (556)
285 COG0190 FolD 5,10-methylene-te 22.6 3.8E+02 0.0083 28.7 8.2 61 575-635 137-206 (283)
286 COG1230 CzcD Co/Zn/Cd efflux s 22.3 1E+03 0.022 25.8 18.5 52 654-705 19-71 (296)
287 cd02071 MM_CoA_mut_B12_BD meth 22.2 2.7E+02 0.0058 25.5 6.4 80 472-552 22-105 (122)
288 cd02067 B12-binding B12 bindin 21.9 82 0.0018 28.6 2.9 81 471-552 21-105 (119)
289 COG1365 Predicted ATPase (PP-l 21.1 3.1E+02 0.0068 27.9 6.7 81 517-601 74-163 (255)
290 PF03129 HGTP_anticodon: Antic 21.1 1.5E+02 0.0032 25.4 4.3 48 505-552 4-55 (94)
291 PLN02389 biotin synthase 21.0 4.8E+02 0.01 29.4 9.2 76 513-595 152-229 (379)
292 smart00306 HintN Hint (Hedgeho 20.7 93 0.002 26.9 3.0 27 139-165 73-99 (100)
293 PRK12360 4-hydroxy-3-methylbut 20.4 6.4E+02 0.014 27.0 9.6 136 463-618 102-263 (281)
294 PF08645 PNK3P: Polynucleotide 20.3 84 0.0018 30.5 2.8 23 513-535 31-53 (159)
295 cd00859 HisRS_anticodon HisRS 20.2 1.5E+02 0.0034 24.6 4.2 45 507-551 8-53 (91)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-150 Score=1248.37 Aligned_cols=850 Identities=48% Similarity=0.793 Sum_probs=794.7
Q ss_pred ccCHHHHHHHHhhCChhHHHhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHH
Q 043535 9 DIDPKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTV 88 (881)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~ 88 (881)
.+..|.|.+|++.+|++.|++++++++++++|+||+..||+.+++|..+|++.||+|.+|+++.++||.+.|+.+++...
T Consensus 79 ~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TL 158 (1034)
T KOG0204|consen 79 GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTL 158 (1034)
T ss_pred ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchH
Confidence 67789999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccc
Q 043535 89 LILFVCAILSLAFGL-------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSN 155 (881)
Q Consensus 89 ~~ll~~ail~~~~~~-------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~ 155 (881)
+++.++|++|+..++ ++++++++++++++..+|+|+++.++ +++.+++.++.|+|||+.++|+..|
T Consensus 159 iIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~-L~~~k~~~k~~ViR~G~r~~isI~d 237 (1034)
T KOG0204|consen 159 IILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRK-LQKEKRNIKFQVIRGGRRQQISIYD 237 (1034)
T ss_pred HHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhh-hhhhhhceEEEEEECCEEEEEEEee
Confidence 999999999998875 66777778888999999999999999 8888888899999999999999999
Q ss_pred cccCcEEEEcCCCeeccceeEEeccceeeecC------CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHH
Q 043535 156 VVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIM 229 (881)
Q Consensus 156 Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~ 229 (881)
||||||+.++.||.+||||++++|+++.+||| ++ +.|+...++++++||.+.+|.++++|+.+|.+|..|+++
T Consensus 238 iVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~-v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m 316 (1034)
T KOG0204|consen 238 LVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDH-VQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIM 316 (1034)
T ss_pred eeeccEEEeecCCccccceEEEeccceeEecccccCCCcc-eeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHH
Confidence 99999999999999999999999999999998 55 778877899999999999999999999999999999999
Q ss_pred hhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------h-----HHHHH-------Hhh
Q 043535 230 RQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-------------------D-----LNAVV-------NLI 278 (881)
Q Consensus 230 ~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-------------------~-----~~~~l-------~i~ 278 (881)
..+.....+++|+|-++++++..+..+++.++++++++.. + +..++ .++
T Consensus 317 ~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 317 TLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred HhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEE
Confidence 9998888899999999999999999999988888777654 0 11222 123
Q ss_pred ccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeec----------C---CCCChH
Q 043535 279 IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAAD----------H---SNIAPK 345 (881)
Q Consensus 279 iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~----------~---~~~~~~ 345 (881)
+|+|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||.|+|++++. . ...+++
T Consensus 397 VPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~ 476 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPS 476 (1034)
T ss_pred CCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHH
Confidence 999999999999999999999999999999999999999999999999999999999883 1 135677
Q ss_pred HHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeC
Q 043535 346 VVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKK 425 (881)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~ 425 (881)
..+++.++.+.|++..+.. +..++.+.+..|+|+|.||+.+.. .+|.+++..|....+.+.+||+|.||+|+++++.+
T Consensus 477 ~~~ll~~gI~~Nt~g~v~~-~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~ 554 (1034)
T KOG0204|consen 477 LLDLLLQGIAQNTTGSVVK-PEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLP 554 (1034)
T ss_pred HHHHHHHHHhhcCCCeEEe-cCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcC
Confidence 8889999999999887776 333444678899999999999998 79999999999999999999999999999999988
Q ss_pred CCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--------Ccccccc
Q 043535 426 ADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV--------PEEELNE 497 (881)
Q Consensus 426 ~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~--------~~~~~~e 497 (881)
+++.| +|+|||+|.|+..|+++.+.+|+..+++++.+..+++.++.|+.+|+|++|+|||+... ++++..+
T Consensus 555 ~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~ 633 (1034)
T KOG0204|consen 555 DGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPE 633 (1034)
T ss_pred CCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCC
Confidence 88765 99999999999999999999999999999999999999999999999999999998432 1235678
Q ss_pred cCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hhhcCCHHHHHHHH
Q 043535 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EFRNYTEEEKMEKV 567 (881)
Q Consensus 498 ~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~~~~~~~~~~~~~ 567 (881)
.+++++|+++++||.||+++++|+.|++|||.|.|+||||..||++||.+|||..+ ++.++++++.+++.
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~ 713 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIW 713 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999876 78889999999999
Q ss_pred hhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 568 EKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 568 ~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
++..|+||.+|.+|.-+|+.++++|++|+++|||.||+|||++||||.|||..|+++||++||++++||||++|+++++|
T Consensus 714 pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 714 PKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred hhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCc
Q 043535 648 GRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLI 727 (881)
Q Consensus 648 gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~ 727 (881)
||+.|.|++|+++|+++.|+..+++.|.+++..+.+|+++.|+||+|+++|.+.+++||+|+|.+++|+|+|+.|++|++
T Consensus 794 GR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LI 873 (1034)
T KOG0204|consen 794 GRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLI 873 (1034)
T ss_pred hhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHH
Q 043535 728 TNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVN------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSF 801 (881)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 801 (881)
++.||++++.|++||..+++++.|.+...|+.. .....|++|++||++|+||.++.|..++.|+|+++++|++|
T Consensus 874 t~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 874 TRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceE
Confidence 999999999999999999999999888777542 34567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcccCCcccccc
Q 043535 802 LGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSYL 863 (881)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~~ 863 (881)
+.++.+++++|++++.|++.+|+++||+|.+|++|+.++++.|++..+.|.+|.+..++.+.
T Consensus 954 ~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~ 1015 (1034)
T KOG0204|consen 954 CVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKY 1015 (1034)
T ss_pred EEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheecccccccccee
Confidence 99999999999999999999999999999999999999999999999999999877766544
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-136 Score=1138.79 Aligned_cols=813 Identities=31% Similarity=0.468 Sum_probs=699.4
Q ss_pred CCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-----HH
Q 043535 31 GGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-----NL 105 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-----~~ 105 (881)
.+++|++.+|+||+++|||.+| +.+|+++||.|+++.++..++|+.+++||.++++.+|+++|++||...+ .+
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~~e~~vI 84 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADFDEPFVI 84 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccceee
Confidence 6899999999999999999998 9999999999999999999999999999999999999999999999875 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEecccee
Q 043535 106 FIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQ 183 (881)
Q Consensus 106 ~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~ 183 (881)
.+++++++.+..++|| +.++.++.+++ +..++|+|+|+.+.++++||||||||.++-||+||||.|+++..++.
T Consensus 85 ~liiv~nvtVG~~QEy----~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~ 160 (972)
T KOG0202|consen 85 TLIIVINVTVGFVQEY----NAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLR 160 (972)
T ss_pred eeeeeeeeeeeeeeeh----hhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeeeee
Confidence 4444444444444444 44444555443 45899999999999999999999999999999999999999999999
Q ss_pred eecC------Ccccccc------------CCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 184 IQES------DHNVEVN------------SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 184 vdes------~~~v~~~------------~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
+||| +| +.|. .++.|++|+||.|..|+++++|+.||.+|.+|++.+.+...++.+||+|+.
T Consensus 161 iDeS~LTGEs~p-v~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ 239 (972)
T KOG0202|consen 161 IDESSLTGESEP-VSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKK 239 (972)
T ss_pred eecccccCCccc-ccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHH
Confidence 9998 33 3332 135689999999999999999999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------------hHHHHH-------HhhccccchHHHHHHHHHHHHHHhhcccc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL--------------DLNAVV-------NLIIPEGLPLAVTVTIAYSMKRLMIDHAM 304 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~--------------~~~~~l-------~i~iP~~L~~~~~~~~~~~~~~l~~~~il 304 (881)
++++...+..+..++++.++++.. .....+ ..+||+|||..++++++.|.+||+|++++
T Consensus 240 ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaI 319 (972)
T KOG0202|consen 240 LDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAI 319 (972)
T ss_pred HHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhh
Confidence 999999998555555555554411 111121 22399999999999999999999999999
Q ss_pred ccCchhhhhccceEEEEecCccccccCceEEeec-----------------------------C------CCCChHHHHH
Q 043535 305 VRKLSACETMGSATVICTDKTGTLTLNQMKGAAD-----------------------------H------SNIAPKVVEL 349 (881)
Q Consensus 305 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~-----------------------------~------~~~~~~~~~~ 349 (881)
||++.++|+||.+++||+|||||||+|+|.+.+. . ....+. ...
T Consensus 320 VRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~-l~~ 398 (972)
T KOG0202|consen 320 VRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL-LQE 398 (972)
T ss_pred hhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH-HHH
Confidence 9999999999999999999999999999998874 0 001222 333
Q ss_pred HHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhh---------------hhhcceEEEEecCCCC
Q 043535 350 IQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQ---------------IRQSCVILQVEAFNSH 414 (881)
Q Consensus 350 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~---------------~~~~~~~~~~~~F~s~ 414 (881)
+....++|+.+.+...+. + .++..|.|+|.||..++. ++++.... ..+.++...++||+|+
T Consensus 399 l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 399 LAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 444556666666543222 2 456689999999999887 77764422 2234566799999999
Q ss_pred CceEEEEEeeCCC-CeEEEEEeCCHHHHHHhccccccCCC-ceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--
Q 043535 415 RKQSRVMMRKKAD-NTVHVHWKGAAEIILAMCSSYYDASG-NVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV-- 490 (881)
Q Consensus 415 ~k~~sviv~~~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~-- 490 (881)
||+|+|.+..+.+ ..+.+|+|||+|.|+++|++++..+| ...|+++..|+.+.+...+++.+|+||+++|++..+.
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 9999999997665 35789999999999999988887666 5589999999999999999999999999999997763
Q ss_pred ---------CcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------
Q 043535 491 ---------PEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------- 553 (881)
Q Consensus 491 ---------~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------- 553 (881)
+.+...|+||+|+|++++.||||++++++|+.|+++||+|.|+|||+.+||.+||+++|+...
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 224567899999999999999999999999999999999999999999999999999999765
Q ss_pred ----hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhc
Q 043535 554 ----EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESS 629 (881)
Q Consensus 554 ----~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 629 (881)
+++.+++++..+...+..+|+|++|++|.++|+.||++|+.|+|+|||.||+|+||.||+|||||.+|++++|++|
T Consensus 635 ~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 635 LTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred cchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccC
Q 043535 630 DIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQ 709 (881)
Q Consensus 630 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~ 709 (881)
|+|+.||||++|+.++++||.+|+|+++++.|.++.|+..+.+.++++.+..+.|+.|+|+||+|+++|.+|+-+|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH---HHhh-cc----------------ccCC-----Ccccc
Q 043535 710 PTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTL---LFKG-ES----------------VLGV-----NENVK 764 (881)
Q Consensus 710 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~----------------~~~~-----~~~~~ 764 (881)
|++++|++||++++.++++...+++++..++|........ ++.. .. +++. .....
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~ 874 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCP 874 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhccccc
Confidence 9999999999999999999999999998888776533222 2211 00 0000 02234
Q ss_pred hhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHHHH
Q 043535 765 DTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIAAI 842 (881)
Q Consensus 765 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~ 842 (881)
.|++|.++++..+||.+++|+.+..-|..++|+|+||.+++++++++|+++ +++++..|+++||++.+|++++.+++.
T Consensus 875 ~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~ 954 (972)
T KOG0202|consen 875 LTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSP 954 (972)
T ss_pred ceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhh
Confidence 599999999999999999998655555559999999999999999988755 578999999999999999999999999
Q ss_pred HHHHHHHHHhccc
Q 043535 843 SWPIGWFVKCIPV 855 (881)
Q Consensus 843 ~~~~~~l~k~~~~ 855 (881)
.++++|++|++.|
T Consensus 955 V~i~dEilK~~~R 967 (972)
T KOG0202|consen 955 VIIVDEILKFIAR 967 (972)
T ss_pred hhhHHHHHHHHHH
Confidence 9999999999987
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1e-129 Score=1200.39 Aligned_cols=838 Identities=41% Similarity=0.685 Sum_probs=731.8
Q ss_pred ccccCHHHHHHHHhh-CChhHHHhhCCHHHHHHHhCCCCCCCCC--hhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHh
Q 043535 7 KTDIDPKTLIEIVKQ-KNLDLLQQFGGTGAVATALQTDIHGGID--GSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTF 83 (881)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~GLs--~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f 83 (881)
-|.+..++++++.+. ++.+.+++|++++++++.|++|.++||| ++| |++|+++||+|+++.++.+++|++++++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~e--v~~r~~~yG~N~l~~~~~~s~~~~~~~~f 94 (941)
T TIGR01517 17 GFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSST--LERREKVYGKNELPEKPPKSFLQIVWAAL 94 (941)
T ss_pred CCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 467889999998866 4678899999999999999999999999 666 99999999999999998899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH--------------H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeC
Q 043535 84 KSFTVLILFVCAILSLAFG--------------L----NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRN 145 (881)
Q Consensus 84 ~~~~~~~ll~~ail~~~~~--------------~----~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd 145 (881)
++|++++++++++++++.+ | .++++++++.+++++.+|+++++.++ +++..++.+++|+||
T Consensus 95 ~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~-l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 95 SDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQ-LNREKSAQKIAVIRG 173 (941)
T ss_pred hCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHhccCCCceEEEEC
Confidence 9999999999999999854 2 33455566677888999999999888 666555679999999
Q ss_pred CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC------CccccccCCCCceeecccEEeeCceeEEEEEE
Q 043535 146 KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAV 219 (881)
Q Consensus 146 g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~t 219 (881)
|++++|+++||||||+|.+++||+|||||++++|+.+.|||| .| +.|.....|++|+||.+.+|++.++|++|
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~p-v~K~~~~~n~v~~GT~v~~G~~~~iV~~t 252 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDP-IKKGAPKDSFLLSGTVVNEGSGRMLVTAV 252 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCc-ccccCCCCceEEeCCeEEeeEEEEEEEEe
Confidence 999999999999999999999999999999999977799998 34 44544455679999999999999999999
Q ss_pred eccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------hHH-------
Q 043535 220 GMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL--------------------DLN------- 272 (881)
Q Consensus 220 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~--------------------~~~------- 272 (881)
|.+|+.||+.+.+.+.+ +++|+++.++++.+.+..++++++++.+++++ ++.
T Consensus 253 G~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 331 (941)
T TIGR01517 253 GVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAV 331 (941)
T ss_pred CCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHH
Confidence 99999999999887654 56799999999999888777666555444321 111
Q ss_pred HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC-----------
Q 043535 273 AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN----------- 341 (881)
Q Consensus 273 ~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~----------- 341 (881)
.++.++|||+||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.++...
T Consensus 332 ~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 411 (941)
T TIGR01517 332 TIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLR 411 (941)
T ss_pred HHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccc
Confidence 122344999999999999999999999999999999999999999999999999999999998875211
Q ss_pred -CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEE
Q 043535 342 -IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRV 420 (881)
Q Consensus 342 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sv 420 (881)
..+...+.+..++++|+.+.... +. ..+.+..|||+|.|+++++. +.+.+....+..+++++.+||+|++|+|++
T Consensus 412 ~~~~~~~~~l~~~~~~~s~~~~~~-~~--~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msv 487 (941)
T TIGR01517 412 NVPKHVRNILVEGISLNSSSEEVV-DR--GGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSV 487 (941)
T ss_pred cCCHHHHHHHHHHHHhCCCCcccc-CC--CCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEE
Confidence 11223344555666665543221 11 11345689999999999987 677777666677888999999999999999
Q ss_pred EEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc---ccccc
Q 043535 421 MMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE---EELNE 497 (881)
Q Consensus 421 iv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---~~~~e 497 (881)
+++.+++ ++++++|||||.|+++|+.+...+|...++++ .++.+.+..++++++|+|++++|||.++.++ .+..|
T Consensus 488 v~~~~~~-~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e 565 (941)
T TIGR01517 488 VVKHSGG-KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPN 565 (941)
T ss_pred EEEeCCC-cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccc
Confidence 9987544 48999999999999999986655677777777 7888999999999999999999999886422 23347
Q ss_pred cCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------hhhcCCHHHHHHHHhh
Q 043535 498 ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------EFRNYTEEEKMEKVEK 569 (881)
Q Consensus 498 ~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------~~~~~~~~~~~~~~~~ 569 (881)
+|++|+|+++++||+|++++++|++|+++|++++|+|||++.||.++|+++|+.++ +++.++++++.+.+.+
T Consensus 566 ~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~ 645 (941)
T TIGR01517 566 GGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPK 645 (941)
T ss_pred cCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999752 6778888999999999
Q ss_pred heeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhH
Q 043535 570 IYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGR 649 (881)
Q Consensus 570 ~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR 649 (881)
..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||.+|++.|+++||+++.++++..+++++++||
T Consensus 646 ~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR 725 (941)
T TIGR01517 646 LRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGR 725 (941)
T ss_pred CeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccH
Q 043535 650 CVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITN 729 (881)
Q Consensus 650 ~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~ 729 (881)
++|+|+++++.|.+++|+..+++.+++.++++++|++++|++|+|+++|.+|++++++|+|++++|++||++++++++++
T Consensus 726 ~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~ 805 (941)
T TIGR01517 726 NVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISR 805 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCC---------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHH
Q 043535 730 VMWRNLLAQAFYQIAVLLTLLFKGESVLGVN---------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKS 800 (881)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~ 800 (881)
.+|..++.++++++++.+++++.+..+++.. ....+|++|.+++++|++|.+++|+.+..++|+++++|++
T Consensus 806 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~ 885 (941)
T TIGR01517 806 SMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRI 885 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHH
Confidence 9999999999999988777766554444321 2457899999999999999999998665578888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 801 FLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
++.+++++++++++++++++.+|++.|+++.+|+++++++++.+++.++.|.++.
T Consensus 886 ~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 886 FVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999863
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.9e-126 Score=1167.62 Aligned_cols=819 Identities=25% Similarity=0.364 Sum_probs=686.7
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHH
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFI 107 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~ 107 (881)
+-.+++++++.|+||..+|||++| |++|+++||+|+++.++.+++|..+++||++|++++++++++++++.+ +...+
T Consensus 8 ~~~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~~~~~~~ 85 (1053)
T TIGR01523 8 FSDIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMHDWIEGG 85 (1053)
T ss_pred hhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 445889999999999989999998 999999999999999988999999999999999999999999999887 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeee
Q 043535 108 AVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQ 185 (881)
Q Consensus 108 ~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vd 185 (881)
+++++++++++..++||+++++.++++++ ..+++|+|||++++|+++||||||||.+++||+|||||++++++++.||
T Consensus 86 iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VD 165 (1053)
T TIGR01523 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTD 165 (1053)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEE
Confidence 45555556666666666666666665543 3489999999999999999999999999999999999999999999999
Q ss_pred cC------CccccccC-------------CCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC---------
Q 043535 186 ES------DHNVEVNS-------------SQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS--------- 237 (881)
Q Consensus 186 es------~~~v~~~~-------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~--------- 237 (881)
|| .| +.|.. ++.|++|+||.|.+|+++++|++||.+|++|++.+.+...+.
T Consensus 166 ES~LTGES~p-V~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~ 244 (1053)
T TIGR01523 166 EALLTGESLP-VIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDD 244 (1053)
T ss_pred chhhcCCCCc-eeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccc
Confidence 98 44 44431 134789999999999999999999999999999997753211
Q ss_pred --------------------------ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hH-H-------HHHHhhcccc
Q 043535 238 --------------------------EWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-DL-N-------AVVNLIIPEG 282 (881)
Q Consensus 238 --------------------------~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~-~-------~~l~i~iP~~ 282 (881)
.+||+|+.++++...+..+++++++++++... +. . +++..++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va~VPeg 324 (1053)
T TIGR01523 245 PNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPES 324 (1053)
T ss_pred cccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcccc
Confidence 24999999999999998888888777765532 11 1 1223339999
Q ss_pred chHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC-------------CC------
Q 043535 283 LPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN-------------IA------ 343 (881)
Q Consensus 283 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-------------~~------ 343 (881)
||+.++++++.+++||+++|++||+++++|+||++++||+|||||||+|+|++.+.... ..
T Consensus 325 Lp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~ 404 (1053)
T TIGR01523 325 LIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNV 404 (1053)
T ss_pred hHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999998764100 00
Q ss_pred ---------------------------------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHH
Q 043535 344 ---------------------------------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAI 384 (881)
Q Consensus 344 ---------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 384 (881)
++....+.....+|+.+.+...+.++ .+...|||+|.||
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~--~~~~~GdptE~AL 482 (1053)
T TIGR01523 405 SGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD--CWKAHGDPTEIAI 482 (1053)
T ss_pred ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCC--ceeeCcCccHHHH
Confidence 00112344455667665543211111 3356799999999
Q ss_pred HhcccccCCCChh------hh-------------------hhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHH
Q 043535 385 LSWPILGMSMDME------QI-------------------RQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAE 439 (881)
Q Consensus 385 ~~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e 439 (881)
++++. +.|.+.. .. +..+++++.+||+|+||||+++++.++++++++|+|||||
T Consensus 483 l~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe 561 (1053)
T TIGR01523 483 HVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFE 561 (1053)
T ss_pred HHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChH
Confidence 99987 6665321 11 2347899999999999999999987655568899999999
Q ss_pred HHHHhccccccCCC-ceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc------------ccccccCceeeeec
Q 043535 440 IILAMCSSYYDASG-NVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE------------EELNEENLILLGLL 506 (881)
Q Consensus 440 ~i~~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~------------~~~~e~~l~~lG~i 506 (881)
.|+++|+++...+| ...+++++.++.+.+..++++++|+||+++|||+++..+ ++..|+|++|+|++
T Consensus 562 ~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~ 641 (1053)
T TIGR01523 562 RIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLI 641 (1053)
T ss_pred HHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEE
Confidence 99999997655444 467899999999999999999999999999999886421 23468999999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------------hhhcCCHHHHHHHHh
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------EFRNYTEEEKMEKVE 568 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------~~~~~~~~~~~~~~~ 568 (881)
+++||+|++++++|++|+++||+|+|+|||++.||.++|+++||... +++.++++++.+...
T Consensus 642 ~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~ 721 (1053)
T TIGR01523 642 GIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA 721 (1053)
T ss_pred eeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999631 456677888888888
Q ss_pred hheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 569 KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 569 ~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
+..+|||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.++++.++++++++|
T Consensus 722 ~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~g 801 (1053)
T TIGR01523 722 LCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEG 801 (1053)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999998789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCC
Q 043535 649 RCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG-----KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLT 723 (881)
Q Consensus 649 R~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~-----~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~ 723 (881)
|++|+|+++++.|.+++|+..+++.+++.++.. +.|++++|++|+|+++|.+|++++++|+|++++|++||+.++
T Consensus 802 R~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~ 881 (1053)
T TIGR01523 802 RRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNE 881 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCC
Confidence 999999999999999999999999998888742 479999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHh---hc--cc--------cCC---CcccchhHHHHHHHHHHHHhhHhhhccc
Q 043535 724 EPLITNVMWRNLLAQAFYQIAVLLTLLFK---GE--SV--------LGV---NENVKDTMIFNTFVLCQVFNEFNARKLE 787 (881)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~--------~~~---~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 787 (881)
++++++.++..++..+++.++..+..+++ +. .. ++. +...++|++|.+++++|+++.+++|+.+
T Consensus 882 ~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~ 961 (1053)
T TIGR01523 882 VGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFD 961 (1053)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999998988888877665544431 10 00 000 1235789999999999999999999854
Q ss_pred cccccc----------------cCcchHHHHHHHHHHHHHHHHH--HHHhhh-hhcCCCCChhhHHHHHHHHHHHHHHHH
Q 043535 788 KKNVFK----------------GIHKNKSFLGIIGITIVLQVVM--VEILKK-FADTEGLNWIQWGSCIGIAAISWPIGW 848 (881)
Q Consensus 788 ~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~--~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~ 848 (881)
.++|+ +.|+|+++++++++++++++++ +|+++. +|++.|++| .|+++++.+++.+++.+
T Consensus 962 -~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e 1039 (1053)
T TIGR01523 962 -NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAE 1039 (1053)
T ss_pred -hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHH
Confidence 33332 3679999999888888877544 577875 999999997 89999999999999999
Q ss_pred HHHhccc
Q 043535 849 FVKCIPV 855 (881)
Q Consensus 849 l~k~~~~ 855 (881)
++|++.|
T Consensus 1040 ~~K~~~r 1046 (1053)
T TIGR01523 1040 IWKCGKR 1046 (1053)
T ss_pred HHHHHHH
Confidence 9999875
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=7.4e-123 Score=1142.01 Aligned_cols=822 Identities=25% Similarity=0.341 Sum_probs=694.3
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----
Q 043535 28 QQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG----- 102 (881)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~----- 102 (881)
++-.+.+++++.|++|..+|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++..
T Consensus 17 ~~~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~ 94 (997)
T TIGR01106 17 DHKLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAS 94 (997)
T ss_pred chhCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 4556999999999999999999998 999999999999999888999999999999999999999999977652
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeec
Q 043535 103 ---------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVP 171 (881)
Q Consensus 103 ---------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vP 171 (881)
+...++++++++++++.+++++++.++.++++.+ ..+++|+|||++++|+++||||||+|.+++||+||
T Consensus 95 ~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IP 174 (997)
T TIGR01106 95 TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIP 174 (997)
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEe
Confidence 3344566777788888888899888887777755 34899999999999999999999999999999999
Q ss_pred cceeEEeccceeeecC----CccccccCC----------CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC
Q 043535 172 ADGIFLDGHSLQIQES----DHNVEVNSS----------QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS 237 (881)
Q Consensus 172 aD~~ll~g~~l~vdes----~~~v~~~~~----------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 237 (881)
|||++++|+++.|||| |+ .|+.+. .+|++|+||.|.+|++.++|++||.+|..|++.+.+...+.
T Consensus 175 aD~~il~~~~l~VdeS~LTGES-~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 175 ADLRIISAQGCKVDNSSLTGES-EPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeEEEEEccCcEEEccccCCCC-CceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 9999999988899998 32 333322 23589999999999999999999999999999998887778
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHH-------HHHhhccccchHHHHHHHHHHHHHHhhcccccc
Q 043535 238 EWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLNA-------VVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVR 306 (881)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~~-------~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 306 (881)
+++|+++.++++.+.+..+++++++++++++. ++.. ++..+|||+||++++++++.++++|+++|+++|
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk 333 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVK 333 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEec
Confidence 88999999999999998888777776665543 2221 123339999999999999999999999999999
Q ss_pred CchhhhhccceEEEEecCccccccCceEEeecCCC----------------CC--hHHHHHHHHHhhhccccceeeccCC
Q 043535 307 KLSACETMGSATVICTDKTGTLTLNQMKGAADHSN----------------IA--PKVVELIQQGFALNTTAGFYKRTSG 368 (881)
Q Consensus 307 ~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~----------------~~--~~~~~~l~~~~~~~~~~~~~~~~~~ 368 (881)
+++++|+||++|++|||||||||+|+|++.+...+ .+ ....+.+....++|+++.......+
T Consensus 334 ~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~ 413 (997)
T TIGR01106 334 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413 (997)
T ss_pred CcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCC
Confidence 99999999999999999999999999998875210 00 1223345556777776654321111
Q ss_pred -CCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeC--CCCeEEEEEeCCHHHHHHhc
Q 043535 369 -SGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKK--ADNTVHVHWKGAAEIILAMC 445 (881)
Q Consensus 369 -~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~--~~~~~~l~~KGa~e~i~~~c 445 (881)
.....+..|||+|.|+++++. ..+.+....+..+++++.+||+|+||+|+++++.. +++++++|+|||||.|+++|
T Consensus 414 ~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 414 VPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 011235679999999999987 45556666777899999999999999999988643 23468899999999999999
Q ss_pred cccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcc-----------cccccCceeeeeccccCCCCc
Q 043535 446 SSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEE-----------ELNEENLILLGLLGIKDPCRP 514 (881)
Q Consensus 446 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~-----------~~~e~~l~~lG~i~~~D~~r~ 514 (881)
+++. .+|...+++++.++.+.+..++++++|+||+++|||+++..+. +..|+|++|+|+++++||+|+
T Consensus 493 ~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 493 SSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 9776 4678889999999999999999999999999999998854211 123889999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------------hhhcCCHHH
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------------------------EFRNYTEEE 562 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------------------------~~~~~~~~~ 562 (881)
+++++|++|+++|++++|+|||++.+|.++|+++|+..+ +++.+++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~e 651 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ 651 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHH
Confidence 999999999999999999999999999999999999532 344566777
Q ss_pred HHHHHhhhe--eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH
Q 043535 563 KMEKVEKIY--VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT 640 (881)
Q Consensus 563 ~~~~~~~~~--v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~ 640 (881)
+.+.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+|+|.+
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 888887654 999999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCC
Q 043535 641 AVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPV 720 (881)
Q Consensus 641 i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~ 720 (881)
+++++++||++|.|+++++.|.++.|+..+++.+++.++..++|++++|++|+|+++|.+|++++++|+|++++|++||+
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~ 811 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPR 811 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccHHHHHHHH-HHHHHHHHHHHHHHHhhcc--------ccCC--------------C-------------ccc
Q 043535 721 RL-TEPLITNVMWRNLL-AQAFYQIAVLLTLLFKGES--------VLGV--------------N-------------ENV 763 (881)
Q Consensus 721 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~--------------~-------------~~~ 763 (881)
.+ ..+++++.++..++ ..++++++..++.+++... .++. . ...
T Consensus 812 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (997)
T TIGR01106 812 NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFT 891 (997)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhh
Confidence 85 67899987776543 3465665544433322110 1110 0 014
Q ss_pred chhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcCCCCChhhHHHHHHHHH
Q 043535 764 KDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADTEGLNWIQWGSCIGIAA 841 (881)
Q Consensus 764 ~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~ 841 (881)
++|++|.+++++|++|.+++|+ .+.++|++.++|++++.++++.+++++++ +|+++.+|++.|+++.+|+.++++++
T Consensus 892 ~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~ 970 (997)
T TIGR01106 892 CHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSL 970 (997)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHH
Confidence 6899999999999999999998 45577764489998888888777776554 56689999999999999999999999
Q ss_pred HHHHHHHHHHhccc
Q 043535 842 ISWPIGWFVKCIPV 855 (881)
Q Consensus 842 ~~~~~~~l~k~~~~ 855 (881)
+.+++.++.|++.|
T Consensus 971 ~~~~~~~~~k~~~r 984 (997)
T TIGR01106 971 LIFVYDEIRKLIIR 984 (997)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998876
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=3.4e-122 Score=1127.16 Aligned_cols=801 Identities=31% Similarity=0.477 Sum_probs=684.1
Q ss_pred CCHHHHHHHhCCCCCCCCC-hhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-H----
Q 043535 31 GGTGAVATALQTDIHGGID-GSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTF-KSFTVLILFVCAILSLAFG-L---- 103 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs-~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f-~~~~~~~ll~~ail~~~~~-~---- 103 (881)
.+++++++.|++|..+||| ++| +++|+++||+|+++.++.+++|+.++++| ++|++++++++++++++.+ +
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g~~~~~~ 84 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAV 84 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHcchhhHH
Confidence 4899999999999999999 767 99999999999999988899999999999 9999999999999999887 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEecccee
Q 043535 104 NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQ 183 (881)
Q Consensus 104 ~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~ 183 (881)
.++++++++..++.+.+++.++..++ +.++ .+.+++|+|||++++|+++||||||+|.+++||+|||||++++|+++.
T Consensus 85 ~i~~~i~~~~~i~~~qe~~a~~~l~~-L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~ 162 (884)
T TIGR01522 85 SITLAILIVVTVGFVQEYRSEKSLEA-LNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLS 162 (884)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH-Hhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceE
Confidence 22223333334444444444444333 3222 245899999999999999999999999999999999999999998889
Q ss_pred eecC----CccccccCCC--------------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 184 IQES----DHNVEVNSSQ--------------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 184 vdes----~~~v~~~~~~--------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
|||| |+ .|+.+.. +|++|+||.|.+|+++++|++||.+|..|++.+.+.+.+..++|+++.
T Consensus 163 VDES~LTGES-~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~ 241 (884)
T TIGR01522 163 IDESNLTGET-TPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKS 241 (884)
T ss_pred EEcccccCCC-cceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHH
Confidence 9998 32 4433322 368999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
+++++.++.+++++++++.+++.+ ++. .++.++|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 242 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~L 321 (884)
T TIGR01522 242 MDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETL 321 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhc
Confidence 999999887776554444443322 222 222344999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCC---------------------------hHHHHHHHHHhhhccccceeeccC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIA---------------------------PKVVELIQQGFALNTTAGFYKRTS 367 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~---------------------------~~~~~~l~~~~~~~~~~~~~~~~~ 367 (881)
|++|++|||||||||+|+|++.+...... +...+.+....++|+.+.... ++
T Consensus 322 g~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 400 (884)
T TIGR01522 322 GSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRN-EA 400 (884)
T ss_pred cCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecC-CC
Confidence 99999999999999999999887521100 001222333445555544321 11
Q ss_pred CCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccc
Q 043535 368 GSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSS 447 (881)
Q Consensus 368 ~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~ 447 (881)
....|||+|.|+++++. +.+.+ ..+..++.++.+||+|+||+|+++++...++++++++||+||.|+++|++
T Consensus 401 -----~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~ 472 (884)
T TIGR01522 401 -----DTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTY 472 (884)
T ss_pred -----CCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhh
Confidence 13458999999999887 55543 33456788999999999999999998765566899999999999999998
Q ss_pred cccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCC
Q 043535 448 YYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG 527 (881)
Q Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G 527 (881)
+...+|...+++++.++.+.+..++++++|+|++++||+.+ +.+++|+|+++++||+||+++++|++|+++|
T Consensus 473 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G 544 (884)
T TIGR01522 473 YQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGG 544 (884)
T ss_pred hhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCC
Confidence 87666777888888899999999999999999999999875 4689999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCch--------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEc
Q 043535 528 VNIKMITGDNIFTAKAIATQCGILKP--------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTG 599 (881)
Q Consensus 528 i~v~~~TGd~~~~a~~ia~~~gi~~~--------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iG 599 (881)
++++|+|||++.+|.++|+++|+... ++++++++++.+.+.+..+|+|++|+||.++|+.+|+.|+.|+|+|
T Consensus 545 i~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvG 624 (884)
T TIGR01522 545 VRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624 (884)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEEC
Confidence 99999999999999999999999752 6677888999999999999999999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043535 600 NGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVL 679 (881)
Q Consensus 600 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~ 679 (881)
||.||+||+++||||||||.++++.++++||+++.++++..+.+++++||++|+|+++++.|.++.|+..+++.+++.++
T Consensus 625 DGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 704 (884)
T TIGR01522 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM 704 (884)
T ss_pred CCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999986789999999999999999999999999999999999999999999999999998888888
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 043535 680 VGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV 759 (881)
Q Consensus 680 ~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (881)
..+.|++++|++|+|++++.+|++++++|+|++++|++||++++++++++.+|..++.+++++++..+++++.... .+.
T Consensus 705 ~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 783 (884)
T TIGR01522 705 GFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGV 783 (884)
T ss_pred cCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 8899999999999999999999999999999999999999999999999999999999999988776655543211 121
Q ss_pred CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHHHHHH--HHhhhhhcCCCCChhhHHHH
Q 043535 760 NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQVVMV--EILKKFADTEGLNWIQWGSC 836 (881)
Q Consensus 760 ~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~ 836 (881)
....++|++|.+++++|++|.+++|+. +.++|+ ++++|++++.+++++++++++++ |+++.+|++.|+++.+|+.+
T Consensus 784 ~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~ 862 (884)
T TIGR01522 784 ITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFL 862 (884)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 234568999999999999999999984 566676 78899999999999888887665 68899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 043535 837 IGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 837 ~~~~~~~~~~~~l~k~~~~ 855 (881)
++++++.+++.+++|++.|
T Consensus 863 ~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 863 LLITSSVCIVDEIRKKVER 881 (884)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-122 Score=1118.74 Aligned_cols=794 Identities=33% Similarity=0.473 Sum_probs=680.2
Q ss_pred CHH--HHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-----
Q 043535 32 GTG--AVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGLN----- 104 (881)
Q Consensus 32 ~~~--~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~~----- 104 (881)
+++ ++...++++...|||++| +.+|+++||+|+++..+..++|..++.+|++|++++++++++++++.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~ 104 (917)
T COG0474 27 SVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGV 104 (917)
T ss_pred ccchhhHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCc
Confidence 555 999999999999999988 99999999999999999999999999999999999999999999888741
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 105 LFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 105 ~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
..+.+..+++++++..+.|+.+.++.++++++ ..+++|+|||++++|+++||||||||.+++||+||||+++++++++
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 22233344444555555566555555555433 4699999999999999999999999999999999999999999999
Q ss_pred eeecC------Ccccccc------------CCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHH
Q 043535 183 QIQES------DHNVEVN------------SSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKA 244 (881)
Q Consensus 183 ~vdes------~~~v~~~------------~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~ 244 (881)
.|||| .| +.|. .++.|++|+||.+.+|++.++|++||.+|+.|++.+.+.......+|+++
T Consensus 185 ~VdEs~LTGES~p-v~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLP-VEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQR 263 (917)
T ss_pred eEEcccccCCCcc-hhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHH
Confidence 99998 33 3332 14578999999999999999999999999999999999877688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----h-HHH-HH------HhhccccchHHHHHHHHHHHHHHhhccccccCchhhh
Q 043535 245 RVRKLTSLVDLIGLAITFSGLLMIL----D-LNA-VV------NLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312 (881)
Q Consensus 245 ~~~~~~~~~~~i~l~~~~~~~~~~~----~-~~~-~l------~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 312 (881)
.++++...+..++++++++++++.. + +.. ++ ..++|++||+.++++++.+.++|+++++++|+++++|
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE 343 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIE 343 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhh
Confidence 9999999999999998888887764 1 222 11 3339999999999999999999999999999999999
Q ss_pred hccceEEEEecCccccccCceEEeecCCCC-----C------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHH
Q 043535 313 TMGSATVICTDKTGTLTLNQMKGAADHSNI-----A------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIE 381 (881)
Q Consensus 313 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~-----~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e 381 (881)
+||++|+||||||||||+|+|++.++.... + +.....+...+++||+..... + + ++..|||+|
T Consensus 344 ~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~---~-~--~~~~gdptE 417 (917)
T COG0474 344 TLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEK---N-G--WYQAGDPTE 417 (917)
T ss_pred hccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccc---c-C--ceecCCccH
Confidence 999999999999999999999999874331 1 111223445666777655432 1 1 678999999
Q ss_pred HHHHhcccccCCC--ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCC
Q 043535 382 KAILSWPILGMSM--DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLE 459 (881)
Q Consensus 382 ~al~~~~~~~~~~--~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~ 459 (881)
.|+++++. +.|. +....+..+++++.+||+|+||||+++++..+++ +++++|||||.|+++|++. +...+++
T Consensus 418 ~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~~~~KGApe~il~~~~~~----~~~~~~~ 491 (917)
T COG0474 418 GALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YILFVKGAPEVILERCKSI----GELEPLT 491 (917)
T ss_pred HHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EEEEEcCChHHHHHHhccc----CcccccC
Confidence 99999998 7777 7777888889999999999999999999965554 9999999999999999975 6777889
Q ss_pred hHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcc----cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcC
Q 043535 460 VGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEE----ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITG 535 (881)
Q Consensus 460 ~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~----~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TG 535 (881)
++.++.+.+..++|+++|+||+++|||..+..+. +..|+|++|+|+++|+||||++++++|+.|+++||++||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 9999999999999999999999999998765332 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCch----------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCH
Q 043535 536 DNIFTAKAIATQCGILKP----------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDA 605 (881)
Q Consensus 536 d~~~~a~~ia~~~gi~~~----------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~ 605 (881)
||++||.+||++||+... +++.++++++.+.++++.||||++|+||.++|+.+|++|++|+|+|||.||+
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 999999999999998764 3467788899999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Q 043535 606 PALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGK-NP 684 (881)
Q Consensus 606 ~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~-~p 684 (881)
||||+|||||||+++|+|++|++||+++.++++..+..+++|||++|.|+++++.|.+++|+..+++.+++.+++.+ .|
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998899999999999999999999999999999999999999999999999999999999888877 89
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-----
Q 043535 685 LTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGV----- 759 (881)
Q Consensus 685 l~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 759 (881)
+++.|++|+|++++.+|+++++.++|+.+.|++||+.+.++++++..+..++.+..++..+..+..|........
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 811 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLG 811 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999999999999999999999998886666555555443333222111111
Q ss_pred ---CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHHHHHH--HHhh-hhhcCCCCChhh
Q 043535 760 ---NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQVVMV--EILK-KFADTEGLNWIQ 832 (881)
Q Consensus 760 ---~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~--~~~~-~~f~~~~l~~~~ 832 (881)
......|++|..++++|.++.+.+|.. +.+++. .++.|+.++++++.+++++++.. ++.. ..|...++++..
T Consensus 812 ~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~ 890 (917)
T COG0474 812 LDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFE 890 (917)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHH
Confidence 044578999999999999999999973 455555 56789988888888777766554 4555 689999999888
Q ss_pred HHHHHHHHH
Q 043535 833 WGSCIGIAA 841 (881)
Q Consensus 833 ~~~~~~~~~ 841 (881)
|+.++....
T Consensus 891 ~~~~~~~~~ 899 (917)
T COG0474 891 WLIAIAVAL 899 (917)
T ss_pred HHHHHHHHH
Confidence 988776663
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.7e-119 Score=1090.44 Aligned_cols=791 Identities=23% Similarity=0.306 Sum_probs=655.4
Q ss_pred CCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-------
Q 043535 31 GGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL------- 103 (881)
Q Consensus 31 ~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------- 103 (881)
.+.+++++.|++|. +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.++
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 38999999999995 7999998 9999999999999999889999999999999999999999999998752
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC------CEEEEEeccccccCcEEEEcCCCee
Q 043535 104 -----NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN------KRRQQILLSNVVVGDVICLKIGDQV 170 (881)
Q Consensus 104 -----~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd------g~~~~I~~~~Lv~GDII~l~~G~~v 170 (881)
...++++++++++++.+++|+++.++.++++++ ..+++|+|| |++++|+++||||||+|.+++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 344455566667777777777777666666654 348999999 4899999999999999999999999
Q ss_pred ccceeEEeccceeeecC------CccccccC---------------------CCCceeecccEEeeCceeEEEEEEeccc
Q 043535 171 PADGIFLDGHSLQIQES------DHNVEVNS---------------------SQNPFLLSGTKVVDGYGRMLATAVGMNT 223 (881)
Q Consensus 171 PaD~~ll~g~~l~vdes------~~~v~~~~---------------------~~~~~l~aGt~v~~g~~~~~V~~tG~~T 223 (881)
||||++++|+++.|||| .| +.|.. +.+|++|+||.|.+|+++++|++||.+|
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~P-V~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALP-VEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcc-eeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 99999999998899998 34 44432 1247899999999999999999999999
Q ss_pred hhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHH
Q 043535 224 TWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIA 292 (881)
Q Consensus 224 ~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~ 292 (881)
++|++.+.+.+ +..++|+++.++++...+..+++.++.+++++.. ++. +++..+|||+||++++++++
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99999998876 5667899999999998877776665555444332 222 22234499999999999999
Q ss_pred HHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcc
Q 043535 293 YSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLE 372 (881)
Q Consensus 293 ~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (881)
.++.+|+++|+++|+++++|+||++|++|||||||||+|+|++.+..........+.+..+ .+++.+ +
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a-~l~s~~-----~------ 412 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLA-WLNSFH-----Q------ 412 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHH-HHhCCC-----C------
Confidence 9999999999999999999999999999999999999999999886322111112223222 223211 1
Q ss_pred eeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCC
Q 043535 373 IELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDAS 452 (881)
Q Consensus 373 ~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~ 452 (881)
...+||+|.|+++++. +.+.+ .....++.++.+||++.+|+|+++++..++ ++++++|||||.|+++|++... +
T Consensus 413 -~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~-~~~~~~KGa~e~il~~c~~~~~-~ 486 (903)
T PRK15122 413 -SGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQG-QHLLICKGAVEEMLAVATHVRD-G 486 (903)
T ss_pred -CCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCC-cEEEEECCcHHHHHHhchhhhc-C
Confidence 1257999999999887 44432 223467889999999999999999986544 3789999999999999997654 5
Q ss_pred CceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----ccccccCceeeeeccccCCCCccHHHHHHHHHhCC
Q 043535 453 GNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG 527 (881)
Q Consensus 453 ~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G 527 (881)
|...+++++.++.+.+..++++.+|+|++++|||+++..+ .+..|+|++|+|+++++||+||+++++|++|+++|
T Consensus 487 ~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aG 566 (903)
T PRK15122 487 DTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENG 566 (903)
T ss_pred CCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCC
Confidence 6777889999999999999999999999999999876432 12357899999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCc------hhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCC
Q 043535 528 VNIKMITGDNIFTAKAIATQCGILK------PEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNG 601 (881)
Q Consensus 528 i~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg 601 (881)
|+++|+|||++.||.++|+++||.. .+++.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||
T Consensus 567 I~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDG 646 (903)
T PRK15122 567 VAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDG 646 (903)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 9999999999999999999999973 2788899999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043535 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG 681 (881)
Q Consensus 602 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~ 681 (881)
.||+|||++|||||||| +|++.||++||+|+.++|+..+++++++||++|+|++|++.|.++.|+..++..+++.++..
T Consensus 647 vNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~ 725 (903)
T PRK15122 647 INDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIP 725 (903)
T ss_pred chhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999888888777777
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc
Q 043535 682 KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761 (881)
Q Consensus 682 ~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (881)
+.|+++.|++|+|+++|+ |++++++|+|++++| +||++++.+++++.++...+..+++.+..++++++ ... .+...
T Consensus 726 ~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~~~~ 801 (903)
T PRK15122 726 FLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWF-VFA-ANSVE 801 (903)
T ss_pred cchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cCcHh
Confidence 789999999999999996 999999999999999 99999999999987775444344333333322222 111 12111
Q ss_pred --ccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHH--HHHHH--hhhhhcCCCCChhhHHH
Q 043535 762 --NVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQV--VMVEI--LKKFADTEGLNWIQWGS 835 (881)
Q Consensus 762 --~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~--~~~~f~~~~l~~~~~~~ 835 (881)
...+|..|.+++++|+++.+++|+.+ .++ |+|++....+++++++++ .++++ ++.+|++.|+++.+|++
T Consensus 802 ~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~ 876 (903)
T PRK15122 802 MQALFQSGWFIEGLLSQTLVVHMLRTQK-IPF----IQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPW 876 (903)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCc----CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHH
Confidence 12357789999999999999999842 233 455554444555555554 34555 78999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 043535 836 CIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 836 ~~~~~~~~~~~~~l~k~~~ 854 (881)
++++++..+++.++.|.+.
T Consensus 877 ~~~~~~~~~~~~e~~k~~~ 895 (903)
T PRK15122 877 LAATLLGYCLVAQGMKRFY 895 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888543
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5.4e-118 Score=1081.53 Aligned_cols=787 Identities=22% Similarity=0.310 Sum_probs=644.9
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFIAVS 110 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~~i~ 110 (881)
+.+++++.|++++ +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.+ +...++++
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I~ 129 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIA 129 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 8999999999997 6999988 999999999999999988999999999999999999999999998877 44445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC------CEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN------KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd------g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
++++++++.+++++++.++.++++.+ ..+++|+|| |++++|+++||||||+|.+++||+|||||++++|+++
T Consensus 130 ~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l 209 (902)
T PRK10517 130 LMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDL 209 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCce
Confidence 66667777777777777766666654 348999999 7899999999999999999999999999999999988
Q ss_pred eeecC----CccccccCCC-------------CceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 183 QIQES----DHNVEVNSSQ-------------NPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 183 ~vdes----~~~v~~~~~~-------------~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
.|||| |+ .|+.+.. +|++|+||.|.+|+++++|++||.+|++|++.+.+.+.+.+++|+++.
T Consensus 210 ~VDES~LTGES-~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~ 288 (902)
T PRK10517 210 FVAQASLTGES-LPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQG 288 (902)
T ss_pred EEEecCcCCCC-CceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHH
Confidence 99998 33 4433222 358999999999999999999999999999999998888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
++++++.+..++++++.++++++. ++. +++..+|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 289 ~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~l 368 (902)
T PRK10517 289 ISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNF 368 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhc
Confidence 999999888887777766655432 222 122334999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSM 394 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~ 394 (881)
|++|++|||||||||+|+|++.+.......+..+.+. ..++++.. + ...+||+|.|+++++. ..+
T Consensus 369 g~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~-~a~l~~~~-----~-------~~~~~p~d~All~~a~-~~~- 433 (902)
T PRK10517 369 GAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLH-SAWLNSHY-----Q-------TGLKNLLDTAVLEGVD-EES- 433 (902)
T ss_pred cCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHH-HHHhcCCc-----C-------CCCCCHHHHHHHHHHH-hcc-
Confidence 9999999999999999999998753211111222332 22333211 1 1157999999999875 222
Q ss_pred ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHH
Q 043535 395 DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMA 474 (881)
Q Consensus 395 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 474 (881)
.....+.++.++.+||+|++|+|+++++..++ .+++++||+||.|+++|+++.. +|...+++++.++.+.+..++++
T Consensus 434 -~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a 510 (902)
T PRK10517 434 -ARSLASRWQKIDEIPFDFERRRMSVVVAENTE-HHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLN 510 (902)
T ss_pred -hhhhhhcCceEEEeeeCCCcceEEEEEEECCC-eEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHH
Confidence 12334567889999999999999999886544 3789999999999999997754 56678888888999999999999
Q ss_pred hcchhhhhhhhccCCCCcc---cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 475 AGSLQCLAFAHKQVPVPEE---ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 475 ~~g~rvl~~a~k~l~~~~~---~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
++|+|++++|||+++..+. ...|+|++|+|+++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||.
T Consensus 511 ~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 511 RQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD 590 (902)
T ss_pred hcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999998764221 1237899999999999999999999999999999999999999999999999999997
Q ss_pred ch------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 552 KP------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 552 ~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
.. +++.++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|+|.|
T Consensus 591 ~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvA 669 (902)
T PRK10517 591 AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIA 669 (902)
T ss_pred ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHH
Confidence 42 77889999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
|++||+++.++|+..+++++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++
T Consensus 670 keaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al 748 (902)
T PRK10517 670 REAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAI 748 (902)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhh
Confidence 9999999999999999999999999999999999999999999998888887776668999999999999999 689999
Q ss_pred cccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc----ccchhHHHHHHHHHHHHhhH
Q 043535 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE----NVKDTMIFNTFVLCQVFNEF 781 (881)
Q Consensus 706 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~t~~f~~~v~~~~~~~~ 781 (881)
++|+|++++|++||+ ++...+.+.+ +..+.+.+...+..++.....++... ...+|..|.+++++|+++.+
T Consensus 749 ~~d~~~~~~m~~p~r-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 749 PFDNVDDEQIQKPQR-WNPADLGRFM----VFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred cCCCCChhhhcCCCC-CCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987 3333333333 33333333222211111111112111 12344569999999999999
Q ss_pred hhhccccccccccCcchHHHHHHHHHHHHHHH--HHHH--HhhhhhcCCCCC--hhhHHHHHHHHHHHHHHHHHHHhcc
Q 043535 782 NARKLEKKNVFKGIHKNKSFLGIIGITIVLQV--VMVE--ILKKFADTEGLN--WIQWGSCIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 782 ~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~--~~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~l~k~~~ 854 (881)
++|+.+ . ++|+|++.+..++.++++++ .++| +++.+|++.|++ +..|++++..++. ++.++.|.+.
T Consensus 824 ~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~ 895 (902)
T PRK10517 824 MIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFY 895 (902)
T ss_pred hhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 999842 2 44567766666666655554 3345 678999999999 6778877766655 5567777654
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=9.7e-117 Score=1072.02 Aligned_cols=785 Identities=23% Similarity=0.320 Sum_probs=641.2
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVS 110 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~ 110 (881)
+++++++.|+++. +|||++| +++|+++||+|+++.++.+++|+.++++|++|++++++++++++++.+. ...++++
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~ 95 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIA 95 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhh
Confidence 8999999999986 6999998 9999999999999998888999999999999999999999999998773 3344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEe------CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVR------NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~R------dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l 182 (881)
++++++++.+++++++.++.++++++ ..+++|+| ||++++|+++||||||+|.+++||+|||||++++|+++
T Consensus 96 ~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l 175 (867)
T TIGR01524 96 LMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDL 175 (867)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCce
Confidence 55556666666666665555555543 35899999 99999999999999999999999999999999999988
Q ss_pred eeecC------CccccccCC-----------CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHH
Q 043535 183 QIQES------DHNVEVNSS-----------QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKAR 245 (881)
Q Consensus 183 ~vdes------~~~v~~~~~-----------~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~ 245 (881)
.|||| .| +.|... .+|++|+||.|.+|+++++|++||.+|++|++.+.+.+ +.+++|+++.
T Consensus 176 ~VDES~LTGES~P-V~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~ 253 (867)
T TIGR01524 176 FINQSALTGESLP-VEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKG 253 (867)
T ss_pred EEEcccccCCCCc-ccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHH
Confidence 99998 33 444321 24689999999999999999999999999999999877 6678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----hHH-------HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhc
Q 043535 246 VRKLTSLVDLIGLAITFSGLLMIL----DLN-------AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETM 314 (881)
Q Consensus 246 ~~~~~~~~~~i~l~~~~~~~~~~~----~~~-------~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~l 314 (881)
++++++++..++++++.+.++++. ++. +++..+|||+||++++++++.++++|+++|+++|+++++|+|
T Consensus 254 ~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~l 333 (867)
T TIGR01524 254 VKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNF 333 (867)
T ss_pred HHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhc
Confidence 999999998888777766655432 222 122334999999999999999999999999999999999999
Q ss_pred cceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCC
Q 043535 315 GSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSM 394 (881)
Q Consensus 315 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~ 394 (881)
|++|++|||||||||+|+|++.+.......+..+.+.. .++++.. + ...+||+|.|+++++. ..
T Consensus 334 g~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~-a~l~~~~-----~-------~~~~~p~~~Al~~~~~-~~-- 397 (867)
T TIGR01524 334 GAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKM-AWLNSYF-----Q-------TGWKNVLDHAVLAKLD-ES-- 397 (867)
T ss_pred cCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHH-HHHhCCC-----C-------CCCCChHHHHHHHHHH-hh--
Confidence 99999999999999999999988642211112223322 2233211 0 1146899999999876 32
Q ss_pred ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHH
Q 043535 395 DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMA 474 (881)
Q Consensus 395 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 474 (881)
.....+..++.++.+||+|++|+|++++++.++ .+++++||+||.|+++|+++.. +|...+++++.++.+.+..++++
T Consensus 398 ~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~-~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 398 AARQTASRWKKVDEIPFDFDRRRLSVVVENRAE-VTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred chhhHhhcCceEEEeccCCCcCEEEEEEEcCCc-eEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHH
Confidence 122334567889999999999999999886544 4789999999999999987644 66777888888889999999999
Q ss_pred hcchhhhhhhhccCCCCcc---cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 475 AGSLQCLAFAHKQVPVPEE---ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 475 ~~g~rvl~~a~k~l~~~~~---~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
.+|+|++++|||+++..+. +..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus 476 ~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID 555 (867)
T ss_pred hcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999998865321 1247899999999999999999999999999999999999999999999999999997
Q ss_pred ch------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 552 KP------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 552 ~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
.. ++++++++++.+.+++..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+
T Consensus 556 ~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvA 634 (867)
T TIGR01524 556 ANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIA 634 (867)
T ss_pred CCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHH
Confidence 42 67788899999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHh
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l 705 (881)
|++||+|++++++..+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++++|++|+|+++| +|++++
T Consensus 635 k~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al 713 (867)
T TIGR01524 635 KEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTL 713 (867)
T ss_pred HHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhh
Confidence 9999999999999999999999999999999999999999999998888887777678999999999999999 699999
Q ss_pred cccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHH----HHHHHHhhccccCC-CcccchhHHHHHHHHHHHHhh
Q 043535 706 VTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAV----LLTLLFKGESVLGV-NENVKDTMIFNTFVLCQVFNE 780 (881)
Q Consensus 706 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~t~~f~~~v~~~~~~~ 780 (881)
++|+|++++|++||+ ++.+.+.+.+ ...|.+.++. ++++++... ..+. .....+|..|.+++++|+++.
T Consensus 714 ~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~f~~~~~~~~~~~ 787 (867)
T TIGR01524 714 PWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVSSIFDIATFLLMWFVFS-ANTVEEQALFQSGWFVVGLLSQTLVV 787 (867)
T ss_pred cCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHHHHHHHHHHHHHHHHhc-ccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999986665 6665443333 3334333222 222222111 0011 012246888999999999999
Q ss_pred HhhhccccccccccCcchHHHHHHHHHHHHHHHHHH--HH--hhhhhcCCCC--ChhhHHHHHHHHHHHHHHHHHHHhcc
Q 043535 781 FNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMV--EI--LKKFADTEGL--NWIQWGSCIGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 781 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~--~~~~f~~~~l--~~~~~~~~~~~~~~~~~~~~l~k~~~ 854 (881)
+++|+.+ . ++|+|++.+.+++++++++++.+ ++ ++.+|++.|+ ++..|++++.+++. ++.++.|.+-
T Consensus 788 ~~~R~~~-~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 788 HMIRTEK-I----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred HhhCcCC-C----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 9999742 2 44568877777777777665543 44 4789999987 55677777766554 5677777553
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.6e-116 Score=1079.19 Aligned_cols=769 Identities=30% Similarity=0.450 Sum_probs=654.0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeC
Q 043535 79 VVDTFKSFTVLILFVCAILSLAFG-----------LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRN 145 (881)
Q Consensus 79 l~~~f~~~~~~~ll~~ail~~~~~-----------~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd 145 (881)
+++||++|++++|+++++++++.+ |...+.+++++++++...++++++.++.++++.+ +.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999885 3334444555556666666666666666666643 458999999
Q ss_pred CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCC-------------CCceeecccEEe
Q 043535 146 KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSS-------------QNPFLLSGTKVV 208 (881)
Q Consensus 146 g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~-------------~~~~l~aGt~v~ 208 (881)
|++++|+++||||||+|.+++||+|||||++++|+++.|||| |+ .|+.+. .+|++|+||.+.
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES-~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGES-VSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCC-CcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999988899998 22 333322 238899999999
Q ss_pred eCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hH----H--
Q 043535 209 DGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----------DL----N-- 272 (881)
Q Consensus 209 ~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----------~~----~-- 272 (881)
+|++.++|++||.+|+.|++.+++.+.+.+++|+++.+++++..+..+.++++++.++++. ++ .
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 9999999999999999999999998888889999999999999888877776666555431 01 1
Q ss_pred -----HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCC------
Q 043535 273 -----AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSN------ 341 (881)
Q Consensus 273 -----~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~------ 341 (881)
.++..+|||+||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.++...
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 111333999999999999999999999999999999999999999999999999999999998775210
Q ss_pred ----------CC----------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCC
Q 043535 342 ----------IA----------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMD 395 (881)
Q Consensus 342 ----------~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~ 395 (881)
.+ +...+.+..+.++|+++.....+... .....|||+|.|+++++. +.|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~--~~~~~gdp~E~ALl~~~~-~~g~~ 396 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG--VYEKVGEATEAALKVLVE-KMGLP 396 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC--ceeeccChhHHHHHHHHH-HcCCC
Confidence 00 11134455566778776553211111 234468999999999887 66655
Q ss_pred hhh----------------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCC
Q 043535 396 MEQ----------------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLE 459 (881)
Q Consensus 396 ~~~----------------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~ 459 (881)
... .++.+++++.+||+|+||||+++++.+ +++++|+|||||.|+++|+++...+|...+++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~--~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 397 ATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS--TGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred chhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC--CcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 432 245678999999999999999999864 33889999999999999998877668888999
Q ss_pred hHHHHHHHHHHHHHHh-cchhhhhhhhccCCCCc----------ccccccCceeeeeccccCCCCccHHHHHHHHHhCCC
Q 043535 460 VGARERFEQIIQGMAA-GSLQCLAFAHKQVPVPE----------EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV 528 (881)
Q Consensus 460 ~~~~~~~~~~~~~~~~-~g~rvl~~a~k~l~~~~----------~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi 528 (881)
++.++.+.+.++++++ +|+||+++|||.++.++ .+.+|+|++|+|+++++||+|++++++|++||++|+
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI 554 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGI 554 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCC
Confidence 9999999999999999 99999999999986421 245689999999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCch------------hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEE
Q 043535 529 NIKMITGDNIFTAKAIATQCGILKP------------EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVA 596 (881)
Q Consensus 529 ~v~~~TGd~~~~a~~ia~~~gi~~~------------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~ 596 (881)
+++|+|||+.++|.++|+++|+..+ +++.+++++......+..+|+|++|+||.++|+.+|+.|++|+
T Consensus 555 ~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va 634 (917)
T TIGR01116 555 RVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVA 634 (917)
T ss_pred EEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEE
Confidence 9999999999999999999999752 4556667777788888899999999999999999999999999
Q ss_pred EEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 597 VTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 597 ~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+|||.||+|||++|||||||+ +|++.++++||+++.++++..+.+++++||++|.|+++++.|.+++|+..+++.+++
T Consensus 635 ~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~ 713 (917)
T TIGR01116 635 MTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLT 713 (917)
T ss_pred EecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043535 677 AVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV 756 (881)
Q Consensus 677 ~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (881)
.++..+.|++++|++|+|++++.+|+++++.++|++++|++||+.++++++++.++..|+..+++++++.+..+++....
T Consensus 714 ~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 793 (917)
T TIGR01116 714 AALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLL 793 (917)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888899999999999999999999999999999999999999999999999999999999999997754333221110
Q ss_pred cCC-----------------------CcccchhHHHHHHHHHHHHhhHhhhccccccccc-cCcchHHHHHHHHHHHHHH
Q 043535 757 LGV-----------------------NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFK-GIHKNKSFLGIIGITIVLQ 812 (881)
Q Consensus 757 ~~~-----------------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~ 812 (881)
.+. ....++|++|.+++++|++|.+++|+. +.++|+ ++++|++++.+++++++++
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~l~ 872 (917)
T TIGR01116 794 THFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAICLSMALH 872 (917)
T ss_pred cCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHHHHHHHHH
Confidence 010 123568999999999999999999994 556665 7889999999999988888
Q ss_pred HHH--HHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 813 VVM--VEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 813 ~~~--~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+++ +|+++.+|++.|++|.+|+++++++++.+++.+++|+++|
T Consensus 873 ~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 873 FLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 776 6889999999999999999999999999999999998863
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-113 Score=948.34 Aligned_cols=843 Identities=25% Similarity=0.349 Sum_probs=716.2
Q ss_pred HHHHHHHHhhCChhHHHhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHH
Q 043535 12 PKTLIEIVKQKNLDLLQQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLIL 91 (881)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~l 91 (881)
++++++.. +++..-+|-.+++|+++++++|..+|||.++ +.+++.+.|+|.+++|+..+-|..|.+|+++-+.+++
T Consensus 25 ~~~l~~~k--~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill 100 (1019)
T KOG0203|consen 25 KKELDDLK--KEVSMDDHKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILL 100 (1019)
T ss_pred hhhHHHHh--hheeeccccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHH
Confidence 34455542 2233335677999999999999999999999 9999999999999999888888889999999999999
Q ss_pred HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEeCCEEEEEeccc
Q 043535 92 FVCAILSLAFGL--------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNS--IQVDVVRNKRRQQILLSN 155 (881)
Q Consensus 92 l~~ail~~~~~~--------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~v~V~Rdg~~~~I~~~~ 155 (881)
|++++++++.+. ...+++..+++++++..|+|+.+..+..+..++. ..++|+|||+.+.+..+|
T Consensus 101 ~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~ee 180 (1019)
T KOG0203|consen 101 WIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEE 180 (1019)
T ss_pred HHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhh
Confidence 999999988763 1223334455667777888988888878877764 489999999999999999
Q ss_pred cccCcEEEEcCCCeeccceeEEeccceeeecC------Ccccccc--------CCCCceeecccEEeeCceeEEEEEEec
Q 043535 156 VVVGDVICLKIGDQVPADGIFLDGHSLQIQES------DHNVEVN--------SSQNPFLLSGTKVVDGYGRMLATAVGM 221 (881)
Q Consensus 156 Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes------~~~v~~~--------~~~~~~l~aGt~v~~g~~~~~V~~tG~ 221 (881)
||+||+|.++-||+||||.+++++..+.+|+| +| .... .+..|+-|.+|.+++|.++++|++||.
T Consensus 181 lVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP-~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd 259 (1019)
T KOG0203|consen 181 LVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEP-QTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGD 259 (1019)
T ss_pred cccccceeeccCCcccceeEEEEecceeEeccccccccCC-ccCCccccccCchhheeeeeeeeEEecceEEEEEEecCC
Confidence 99999999999999999999999999999987 44 2211 235678999999999999999999999
Q ss_pred cchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hHHH----HHHh--h-ccccchHHHHHH
Q 043535 222 NTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----DLNA----VVNL--I-IPEGLPLAVTVT 290 (881)
Q Consensus 222 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----~~~~----~l~i--~-iP~~L~~~~~~~ 290 (881)
+|.+|++..........++|++..++++..++...++.+++..|++.+ .+.. ++.+ + +|+||+..++.+
T Consensus 260 ~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~ 339 (1019)
T KOG0203|consen 260 RTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVC 339 (1019)
T ss_pred ceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhh
Confidence 999999999888888999999999999999999998888888776554 2222 1111 2 999999999999
Q ss_pred HHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCC------------------CCChHHHHHHHH
Q 043535 291 IAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS------------------NIAPKVVELIQQ 352 (881)
Q Consensus 291 ~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~------------------~~~~~~~~~l~~ 352 (881)
+....+||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.-. ...+.....+..
T Consensus 340 LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r 419 (1019)
T KOG0203|consen 340 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSR 419 (1019)
T ss_pred HHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999998511 111334455667
Q ss_pred HhhhccccceeeccCCC-CcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC--CCe
Q 043535 353 GFALNTTAGFYKRTSGS-GLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA--DNT 429 (881)
Q Consensus 353 ~~~~~~~~~~~~~~~~~-~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~--~~~ 429 (881)
+.++|+.+.....+.+- ..+....|++.|.||++++. ..-.+....|+.++.+.++||+|.+|..-.+.+..+ +.+
T Consensus 420 ~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~ 498 (1019)
T KOG0203|consen 420 IATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPR 498 (1019)
T ss_pred HHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcc
Confidence 77888887765422222 13456789999999999987 444455788899999999999999999988877654 345
Q ss_pred EEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-----------cccccc
Q 043535 430 VHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-----------EELNEE 498 (881)
Q Consensus 430 ~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-----------~~~~e~ 498 (881)
+.+.+|||||.++++|+.+.. +|+..|+++..++.+.+...++...|.||++|+++.+++.+ .+..-.
T Consensus 499 ~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~ 577 (1019)
T KOG0203|consen 499 FLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTD 577 (1019)
T ss_pred ceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcch
Confidence 888899999999999998766 78889999999999999999999999999999999998532 234557
Q ss_pred CceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------- 553 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------- 553 (881)
++.|+|++++-||||..+++++.+||++||||+|+|||++.||+++|++.||...
T Consensus 578 nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~ 657 (1019)
T KOG0203|consen 578 NLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAK 657 (1019)
T ss_pred hccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccc
Confidence 8999999999999999999999999999999999999999999999999997653
Q ss_pred -------hhhcCCHHHHHHHHhhhe--eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH
Q 043535 554 -------EFRNYTEEEKMEKVEKIY--VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV 624 (881)
Q Consensus 554 -------~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~ 624 (881)
++.+++.+++++.+.+.. ||||.+|+||..+|+.+|++|.+|+++|||.||+||||+||||||||..|+|+
T Consensus 658 a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv 737 (1019)
T KOG0203|consen 658 AAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 737 (1019)
T ss_pred eEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchH
Confidence 566778888998887654 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHH
Q 043535 625 AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704 (881)
Q Consensus 625 a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~ 704 (881)
+|++||++++||||.+|+..+++||.+|+|+||.+.|.++.|+..+.+.+++.+++.|.|+.++++|.+++.+|+.|+++
T Consensus 738 sKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 738 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred HHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCccccccCCCC-CCCCCccHHHHH-HHHHHHHHHHHHHHHHHHhhccccCC-----------------------
Q 043535 705 LVTEQPTKELMEKPPVR-LTEPLITNVMWR-NLLAQAFYQIAVLLTLLFKGESVLGV----------------------- 759 (881)
Q Consensus 705 l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 759 (881)
|++|+|+.++|+|+|++ .+.++++.+++. .....|.+|++..|+.||......|+
T Consensus 818 LAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~Ds 897 (1019)
T KOG0203|consen 818 LAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDS 897 (1019)
T ss_pred HhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhh
Confidence 99999999999999998 567788877653 44445777776666555433211111
Q ss_pred ---C---------cccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHHhhhhhcC
Q 043535 760 ---N---------ENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEILKKFADT 825 (881)
Q Consensus 760 ---~---------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 825 (881)
. +.+.+|..|.+++.+|+.+++.+++ ++.++|+.-++|+.+++++++..++..++ +|.....+++
T Consensus 898 yGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~ 976 (1019)
T KOG0203|consen 898 YGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGM 976 (1019)
T ss_pred ccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhcc
Confidence 0 3456788999999999999999887 67888886699999998888766665444 4667888999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHhcccCCcccccc
Q 043535 826 EGLNWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSYL 863 (881)
Q Consensus 826 ~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~~ 863 (881)
.|+.|.+|+..++.+++.|+.++++|++-| ..|=+|.
T Consensus 977 ~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR-~~P~gw~ 1013 (1019)
T KOG0203|consen 977 YPLKFQWWLVAFPFGILIFVYDEVRKLFIR-RYPGGWL 1013 (1019)
T ss_pred CCCCcEEEEecccceeeeeeHHHHHhHhhh-hCCCchh
Confidence 999999999999999999999999999876 3333443
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.1e-108 Score=1022.90 Aligned_cols=751 Identities=22% Similarity=0.299 Sum_probs=610.5
Q ss_pred CCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 043535 45 HGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQ 123 (881)
Q Consensus 45 ~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~ 123 (881)
..|||++| +++|+++||+|+++.+ .+++|+++++++.+|+++++++++++|+..++ ...+.++++++++....+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~~~~~~~~i~~i~~~~~~~~~~~ 213 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSLCIVFMSSTSISLSVYQ 213 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 46999988 9999999999999986 58999999999999999999999888887763 44444555555566666666
Q ss_pred HHHHHHHHHhhh-cCCceEEEeCCEEEEEeccccccCcEEEEc--CCCeeccceeEEeccceeeecC------Ccccccc
Q 043535 124 NKKFEKLLSKVS-NSIQVDVVRNKRRQQILLSNVVVGDVICLK--IGDQVPADGIFLDGHSLQIQES------DHNVEVN 194 (881)
Q Consensus 124 ~~~~~~~l~~~~-~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~--~G~~vPaD~~ll~g~~l~vdes------~~~v~~~ 194 (881)
+++..+.++++. ++..++|+|||++++|+++||||||+|.++ +|++|||||++++|+ +.|||| .| +.|.
T Consensus 214 ~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P-v~K~ 291 (1054)
T TIGR01657 214 IRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP-VLKF 291 (1054)
T ss_pred HHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc-eecc
Confidence 666555576654 345899999999999999999999999999 999999999999996 599998 33 3332
Q ss_pred C----------------CCCceeecccEEee-------CceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHH
Q 043535 195 S----------------SQNPFLLSGTKVVD-------GYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTS 251 (881)
Q Consensus 195 ~----------------~~~~~l~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~ 251 (881)
. ++++++|+||.|.+ |.+.++|++||.+|..|++.+.+.+++...+++++...++..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~ 371 (1054)
T TIGR01657 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFIL 371 (1054)
T ss_pred cCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHH
Confidence 1 13467999999995 789999999999999999999998888889999999999888
Q ss_pred HHHHHHHHHHHHHHHHHh----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEE
Q 043535 252 LVDLIGLAITFSGLLMIL----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVI 320 (881)
Q Consensus 252 ~~~~i~l~~~~~~~~~~~----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i 320 (881)
.+..++++.++.+++... + ...++++++|++||++++++++.++.||+|+|++||++.++|.+|++|++
T Consensus 372 ~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vi 451 (1054)
T TIGR01657 372 FLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVC 451 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEE
Confidence 777666554444433222 1 22333555999999999999999999999999999999999999999999
Q ss_pred EecCccccccCceEEeecCCCCCh------------HHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcc
Q 043535 321 CTDKTGTLTLNQMKGAADHSNIAP------------KVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWP 388 (881)
Q Consensus 321 ~~DKTGTLT~~~m~v~~~~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~ 388 (881)
|||||||||+|+|++.++...... .....+..+++.||+..... .+..|||+|.|++++.
T Consensus 452 cfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~--------~~~~Gdp~E~al~~~~ 523 (1054)
T TIGR01657 452 CFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLE--------GKLVGDPLDKKMFEAT 523 (1054)
T ss_pred EEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEEC--------CEEecCHHHHHHHHhC
Confidence 999999999999999886321100 11233455667777654321 1568999999999986
Q ss_pred cccCCCChh---h-----------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCc
Q 043535 389 ILGMSMDME---Q-----------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGN 454 (881)
Q Consensus 389 ~~~~~~~~~---~-----------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~ 454 (881)
.+....+.+ . ....+++++.+||+|++||||++++..+++++++|+|||||.|+++|++.
T Consensus 524 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------ 597 (1054)
T TIGR01657 524 GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------ 597 (1054)
T ss_pred CCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------
Confidence 543222100 0 02468899999999999999999998766678899999999999999842
Q ss_pred eecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC--------cccccccCceeeeeccccCCCCccHHHHHHHHHhC
Q 043535 455 VKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP--------EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYA 526 (881)
Q Consensus 455 ~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~--------~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~ 526 (881)
..++++.+.+++++++|+||+++|||+++.. +++..|+|++|+|+++++|++||+++++|++|+++
T Consensus 598 ------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~a 671 (1054)
T TIGR01657 598 ------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRA 671 (1054)
T ss_pred ------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHC
Confidence 2256788899999999999999999998632 24567899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCchhh---------------------------------------------------
Q 043535 527 GVNIKMITGDNIFTAKAIATQCGILKPEF--------------------------------------------------- 555 (881)
Q Consensus 527 Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--------------------------------------------------- 555 (881)
||+++|+|||++.||.++|+++||..++-
T Consensus 672 gi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1054)
T TIGR01657 672 SIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASR 751 (1054)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccc
Confidence 99999999999999999999999964310
Q ss_pred -------------hcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCc
Q 043535 556 -------------RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGT 622 (881)
Q Consensus 556 -------------~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~ 622 (881)
.++.++++.+.+.++.||||++|+||.++|+.+|+.|+.|+|+|||+||+||||+|||||||+ ++
T Consensus 752 ~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~- 829 (1054)
T TIGR01657 752 YHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-EA- 829 (1054)
T ss_pred eEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-cc-
Confidence 012234566777888999999999999999999999999999999999999999999999998 43
Q ss_pred HHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Q 043535 623 AVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGA 702 (881)
Q Consensus 623 ~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~ 702 (881)
+ |..+||+++.+++++++++++++||+++.++++.++|.+.+++...+...+ ++..+.|++++|++|+|++++.+++
T Consensus 830 d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~ 906 (1054)
T TIGR01657 830 E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVA 906 (1054)
T ss_pred c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHH
Confidence 3 558899999999999999999999999999999999999999887555443 3334589999999999999999999
Q ss_pred HHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc--cccC------C----CcccchhHHHH
Q 043535 703 LALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGE--SVLG------V----NENVKDTMIFN 770 (881)
Q Consensus 703 l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~----~~~~~~t~~f~ 770 (881)
++++.++|++++|++|| ..+++++.++..++.++++++++.+..++... .|+. . .....+|++|
T Consensus 907 l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f- 982 (1054)
T TIGR01657 907 LLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF- 982 (1054)
T ss_pred HHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-
Confidence 99999999999999999 46899999999999999999887766655332 2321 1 0123358888
Q ss_pred HHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHH----HHHHhhhhhcCCCCCh
Q 043535 771 TFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVV----MVEILKKFADTEGLNW 830 (881)
Q Consensus 771 ~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~l~~ 830 (881)
.++.+|.+..+.+++ ...+|.+++++|+++++++++.+++++. ++++++.+|++.|++.
T Consensus 983 ~~~~~~~~~~~~~~~-~g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 983 FVSSFQYLITAIVNS-KGPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred HHHHHHHHHheEEEc-CCcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 555666666666666 3667777999999888887776665542 2478899999999985
No 14
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.6e-107 Score=975.58 Aligned_cols=713 Identities=22% Similarity=0.350 Sum_probs=587.7
Q ss_pred CCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 043535 47 GIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG-LNLFIAVSIYISVSASSKYMQNK 125 (881)
Q Consensus 47 GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~-~~~~~~i~~~~~i~~~~~~~~~~ 125 (881)
|||++| +++|+++||+|+++++ .++.|..|+++|++|++++++++++++++.+ +...+.+++++++++..++++++
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALENWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhcchhhhhhhhhhhHHHHHHHHHHHH
Confidence 899998 9999999999999985 4567888999999999999999999999886 43344444555666666777777
Q ss_pred HHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCc
Q 043535 126 KFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNP 199 (881)
Q Consensus 126 ~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~ 199 (881)
+.++.++++.+ +.+++|+|||++++|+++||||||+|.+++||+|||||++++|+++.+||| |+ .|+.+..++
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES-~PV~K~~~~ 156 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGES-LPVTKKTGD 156 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCc-cceEeccCC
Confidence 77666666654 458999999999999999999999999999999999999999997899998 44 666666899
Q ss_pred eeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHH--
Q 043535 200 FLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-----DLN-- 272 (881)
Q Consensus 200 ~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-----~~~-- 272 (881)
.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++|+|+.+++++.++.+++++++++.+++++ ++.
T Consensus 157 ~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 236 (755)
T TIGR01647 157 IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREG 236 (755)
T ss_pred eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999998888788999999999999998888777776666543 222
Q ss_pred -----HHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCC-hHH
Q 043535 273 -----AVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIA-PKV 346 (881)
Q Consensus 273 -----~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~~~ 346 (881)
.++..+|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|++.+...... .+.
T Consensus 237 ~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~ 316 (755)
T TIGR01647 237 LQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDK 316 (755)
T ss_pred HHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCH
Confidence 22234499999999999999999999999999999999999999999999999999999999988743211 112
Q ss_pred HHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC
Q 043535 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA 426 (881)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~ 426 (881)
.+.+..+ ++|+. ..++||+|.|+++++. +. ...+..++..+..||++.+|+|+++++..+
T Consensus 317 ~~~l~~a-~~~~~--------------~~~~~pi~~Ai~~~~~-~~----~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~ 376 (755)
T TIGR01647 317 DDVLLYA-ALASR--------------EEDQDAIDTAVLGSAK-DL----KEARDGYKVLEFVPFDPVDKRTEATVEDPE 376 (755)
T ss_pred HHHHHHH-HHhCC--------------CCCCChHHHHHHHHHH-Hh----HHHHhcCceEEEeccCCCCCeEEEEEEeCC
Confidence 2333322 22221 1246899999999765 22 223456788999999999999999998765
Q ss_pred CCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeec
Q 043535 427 DNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLL 506 (881)
Q Consensus 427 ~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i 506 (881)
+++.++++||+||.|+++|+.. ++.++.+.+..++++.+|+|++++|||+ .|++++|+|++
T Consensus 377 ~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli 437 (755)
T TIGR01647 377 TGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLL 437 (755)
T ss_pred CceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEe
Confidence 4557788999999999999742 2456778888899999999999999973 25789999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------hhhcCCHHHHHHHHhhheeeec
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-----------EFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
+++||+||+++++|++||++||+++|+|||++.+|.++|+++||... +.+.++++++.+.+++..+|+|
T Consensus 438 ~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 438 PLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred eccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 99999999999999999999999999999999999999999999752 2346778889999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHH
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNI 655 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 655 (881)
++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||+ +|++.+|++||+++.++++..+++++++||++|+|+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni 596 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRM 596 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHH
Q 043535 656 QKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNL 735 (881)
Q Consensus 656 ~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 735 (881)
++++.|.++.|+..+++.+++.++.+ .|++|+|++|+|+++|. +++++++|++++. ++|..+ .+ ...+..+
T Consensus 597 ~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~---~~-~~~~~~~ 667 (755)
T TIGR01647 597 KSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRW---NL-REVFTMS 667 (755)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCcc---ch-HHHHHHH
Confidence 99999999999998877777766544 45999999999999997 6999999998742 333322 23 3566666
Q ss_pred HHHHHHHHHHHHHHHHhhcc---c---cC--CCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHH
Q 043535 736 LAQAFYQIAVLLTLLFKGES---V---LG--VNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGI 807 (881)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~---~---~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~ 807 (881)
+..|.+.++..+.++++... + ++ .+....+|++|..+++.|.++.+++|+. + .+|+. ..++++..+.++
T Consensus 668 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~-~-~~~~~-~p~~~l~~~~~~ 744 (755)
T TIGR01647 668 TVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTH-G-FFWSE-RPGKLLFIAFVI 744 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccC-C-CCccc-CCcHHHHHHHHH
Confidence 66777766655544432221 1 11 1234678999999999999999999973 3 33432 366666666655
Q ss_pred HHHHHHHH
Q 043535 808 TIVLQVVM 815 (881)
Q Consensus 808 ~~~~~~~~ 815 (881)
..++..++
T Consensus 745 ~~~~~~~~ 752 (755)
T TIGR01647 745 AQIIATFI 752 (755)
T ss_pred HHHHHHHH
Confidence 55544443
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.8e-98 Score=930.87 Aligned_cols=765 Identities=21% Similarity=0.239 Sum_probs=591.8
Q ss_pred cCCCccCCCCCCcH---HHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 62 FGSNTYKKPPTESF---FSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKFEKLLS 132 (881)
Q Consensus 62 yG~N~i~~~~~~~~---~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~ 132 (881)
|.+|.+...|++.+ ++.+++||++++|++|++++++++++.+ ..++|++++++++++.+++++.++++ .+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~-~d 79 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRR-RD 79 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHH-hH
Confidence 67899998888766 7889999999999999999999999763 67888999999999999999999999 66
Q ss_pred hhhcCCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccc----eeeecC------Ccccccc-------
Q 043535 133 KVSNSIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS----LQIQES------DHNVEVN------- 194 (881)
Q Consensus 133 ~~~~~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~----l~vdes------~~~v~~~------- 194 (881)
+..|+..++|+|+ |++++++++||+|||+|.|++||+||||++++++++ +.+|++ .| +.|.
T Consensus 80 ~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~-~~k~~~~~~~~ 158 (1057)
T TIGR01652 80 KEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNL-KLRQALEETQK 158 (1057)
T ss_pred HHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecc-eEeecchhhhc
Confidence 6667889999997 899999999999999999999999999999998654 578876 12 1111
Q ss_pred ---------------------------------------CCCCceeecccEEee-CceeEEEEEEeccchhhHHHhhhcc
Q 043535 195 ---------------------------------------SSQNPFLLSGTKVVD-GYGRMLATAVGMNTTWGQIMRQTSY 234 (881)
Q Consensus 195 ---------------------------------------~~~~~~l~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~~~~ 234 (881)
.+.+|++++||.+.+ |++.|+|++||.+|.+++. ...
T Consensus 159 ~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n---~~~ 235 (1057)
T TIGR01652 159 MLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN---ATQ 235 (1057)
T ss_pred cCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc---CCC
Confidence 012367899999999 9999999999999977654 445
Q ss_pred CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------hH----------------HHHH------Hhhccccc
Q 043535 235 NTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---------DL----------------NAVV------NLIIPEGL 283 (881)
Q Consensus 235 ~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~---------~~----------------~~~l------~i~iP~~L 283 (881)
.+.+++++++.++++...++.++++++++.+++.. .+ ..++ ..++|++|
T Consensus 236 ~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL 315 (1057)
T TIGR01652 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISL 315 (1057)
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceee
Confidence 67789999999999999888877777666555321 01 0111 23399999
Q ss_pred hHHHHHHHHHHH------HHHhhc----cccccCchhhhhccceEEEEecCccccccCceEEeecCC-------CC----
Q 043535 284 PLAVTVTIAYSM------KRLMID----HAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS-------NI---- 342 (881)
Q Consensus 284 ~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~-------~~---- 342 (881)
++.++++....+ .+|.++ ++.+|+++++|+||++++||+|||||||+|+|+++++.. ..
T Consensus 316 ~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~ 395 (1057)
T TIGR01652 316 YVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395 (1057)
T ss_pred eehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHH
Confidence 999999999888 778764 599999999999999999999999999999999987620 00
Q ss_pred ---------------------------C-------------hHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHH
Q 043535 343 ---------------------------A-------------PKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEK 382 (881)
Q Consensus 343 ---------------------------~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~ 382 (881)
+ .+....+..++++||++.....+++.+...+..+||+|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ 475 (1057)
T TIGR01652 396 DAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEA 475 (1057)
T ss_pred HHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHH
Confidence 0 011233456778888776542111111123557999999
Q ss_pred HHHhcccccCCCChhh--------------hhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhcccc
Q 043535 383 AILSWPILGMSMDMEQ--------------IRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSY 448 (881)
Q Consensus 383 al~~~~~~~~~~~~~~--------------~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~ 448 (881)
|+++++. ..|+.... ....+++++.+||+|+||||||+++++++ ++++|+|||||.|+++|+..
T Consensus 476 ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 476 ALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeCcHHHHHHHhhcc
Confidence 9999887 66654321 22468899999999999999999998654 48899999999999999741
Q ss_pred ccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------ccccccCceee
Q 043535 449 YDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------EELNEENLILL 503 (881)
Q Consensus 449 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~~~~e~~l~~l 503 (881)
++..++.+.+.+++++.+|+||+++|||++++++ .+.+|+|++|+
T Consensus 554 ----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~l 623 (1057)
T TIGR01652 554 ----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILL 623 (1057)
T ss_pred ----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEE
Confidence 2345678889999999999999999999987531 13468999999
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----------c----------------
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----------N---------------- 557 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------~---------------- 557 (881)
|+++++|++|++++++|++|+++||++||+|||+++||.++|++||+...+.. +
T Consensus 624 G~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~ 703 (1057)
T TIGR01652 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTS 703 (1057)
T ss_pred EEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999764210 0
Q ss_pred ---------------CCHH------------HHHHHHhhh--eeeeccCHHHHHHHHHHHhhc-CCEEEEEcCCccCHHH
Q 043535 558 ---------------YTEE------------EKMEKVEKI--YVMARASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPA 607 (881)
Q Consensus 558 ---------------~~~~------------~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~-g~~v~~iGDg~ND~~~ 607 (881)
.+.+ ++.+...++ .||||++|+||.++|+.+|+. |++|+|+|||+||++|
T Consensus 704 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~m 783 (1057)
T TIGR01652 704 EEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSM 783 (1057)
T ss_pred HhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHH
Confidence 0001 112233333 499999999999999999998 9999999999999999
Q ss_pred HHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---C
Q 043535 608 LEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL-NWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGK---N 683 (881)
Q Consensus 608 l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~---~ 683 (881)
|++|||||++.+.+..+|+.+||+++.+ |..+.+++ .|||++|.|+++.+.|.+++|+..+++.+++.+++++ +
T Consensus 784 lk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~ 861 (1057)
T TIGR01652 784 IQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQT 861 (1057)
T ss_pred HhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 9999999998656656899999999985 89999887 8899999999999999999999999999999988765 4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcc--cCCCccccccCCC----CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc-
Q 043535 684 PLTAVQLLWMNLIVLTLGALALVT--EQPTKELMEKPPV----RLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV- 756 (881)
Q Consensus 684 pl~~~q~l~~~~~~~~~~~l~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 756 (881)
++.+++++|+|++++.+|+++++. +++++++|.++|+ .+..+.++.+.+..|+..|++++++++++.+.....
T Consensus 862 ~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~ 941 (1057)
T TIGR01652 862 LYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILG 941 (1057)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 577889999999999999999974 3556788888887 456788999888889999999998876554322211
Q ss_pred --c--CC--CcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHHHHhhhh--------
Q 043535 757 --L--GV--NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMVEILKKF-------- 822 (881)
Q Consensus 757 --~--~~--~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-------- 822 (881)
. |. +.....++.|.++++...+..+..-+ .++++.+.++.+++++.+++......+
T Consensus 942 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~ 1011 (1057)
T TIGR01652 942 DFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEIN----------RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYK 1011 (1057)
T ss_pred ccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh----------HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHH
Confidence 0 11 12233455666665555544433211 112222233333333332222111111
Q ss_pred -hcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 823 -ADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 823 -f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+....-++.+|+.+++..++++++..+++.+++
T Consensus 1012 ~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~ 1045 (1057)
T TIGR01652 1012 AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQR 1045 (1057)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111123577899888888889999999998875
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.5e-93 Score=877.69 Aligned_cols=768 Identities=18% Similarity=0.202 Sum_probs=581.1
Q ss_pred cccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 60 GLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKFEKL 130 (881)
Q Consensus 60 ~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~~~~ 130 (881)
.+|..|.+...|++ .+++.+++||+++.|+||++++++++++.+ +.++|+++++++++++++.++.++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k- 163 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHR- 163 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 35888999988776 445678999999999999999999998864 67899999999999999999999999
Q ss_pred HHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccc----eeeecC----Ccccccc--------
Q 043535 131 LSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS----LQIQES----DHNVEVN-------- 194 (881)
Q Consensus 131 l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~----l~vdes----~~~v~~~-------- 194 (881)
.|+..|+..++|+|+|++++++|++|+|||+|.|++||+||||++++++++ ..+|++ |+ .+|.
T Consensus 164 ~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt-~~k~k~~~~~~~ 242 (1178)
T PLN03190 164 SDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGES-NLKTRYAKQETL 242 (1178)
T ss_pred hHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCee-eeeEecccchhh
Confidence 777778889999999999999999999999999999999999999998433 367766 11 0100
Q ss_pred -------------------------------------CCCCceeecccEEeeC-ceeEEEEEEeccchhhHHHhhhccCC
Q 043535 195 -------------------------------------SSQNPFLLSGTKVVDG-YGRMLATAVGMNTTWGQIMRQTSYNT 236 (881)
Q Consensus 195 -------------------------------------~~~~~~l~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~ 236 (881)
...+|++++||.+.+. .++|+|++||.+|. ++.+...++
T Consensus 243 ~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~~~~ 319 (1178)
T PLN03190 243 SKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNNSGAP 319 (1178)
T ss_pred hcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcCCCCC
Confidence 0134678888888876 69999999999996 454555667
Q ss_pred CccChHHHHHHHHHHHHHHHHHHHHHHHHHHH---hh----------------------------------HHHH-----
Q 043535 237 SEWTLLKARVRKLTSLVDLIGLAITFSGLLMI---LD----------------------------------LNAV----- 274 (881)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~---~~----------------------------------~~~~----- 274 (881)
.|.+++++.++++...++.+.+++|+++.+.. .. +..+
T Consensus 320 ~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~li 399 (1178)
T PLN03190 320 SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVI 399 (1178)
T ss_pred CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 89999999999999988888777766654331 00 0111
Q ss_pred -HHhhccccchHHHHHHHHHHHHHHhhcc----------ccccCchhhhhccceEEEEecCccccccCceEEeecC----
Q 043535 275 -VNLIIPEGLPLAVTVTIAYSMKRLMIDH----------AMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADH---- 339 (881)
Q Consensus 275 -l~i~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~---- 339 (881)
+..+||.+|++.+.+.....+..+.++. +.||+++.+|+||+|++||+|||||||+|+|+++++.
T Consensus 400 l~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~ 479 (1178)
T PLN03190 400 VFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479 (1178)
T ss_pred HHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCE
Confidence 1234999999999999976566666544 7799999999999999999999999999999988751
Q ss_pred ---CCC---------------------------C-------------h--HHHHHHHHHhhhccccceeeccCC-C---C
Q 043535 340 ---SNI---------------------------A-------------P--KVVELIQQGFALNTTAGFYKRTSG-S---G 370 (881)
Q Consensus 340 ---~~~---------------------------~-------------~--~~~~~l~~~~~~~~~~~~~~~~~~-~---~ 370 (881)
... + + ...+.+..++++||++.....+.. + +
T Consensus 480 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~ 559 (1178)
T PLN03190 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVK 559 (1178)
T ss_pred EcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcccc
Confidence 000 0 0 012335567888998765321111 1 1
Q ss_pred cceeecCChHHHHHHhcccccCCC------------ChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCH
Q 043535 371 LEIELSGSSIEKAILSWPILGMSM------------DMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAA 438 (881)
Q Consensus 371 ~~~~~~~~p~e~al~~~~~~~~~~------------~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~ 438 (881)
...+.++||+|.||++++. ..|+ +....+..|++++++||+|+||||||+++.+++ ++++|+||||
T Consensus 560 ~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~-~~~l~~KGA~ 637 (1178)
T PLN03190 560 LMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDK-TVKVFVKGAD 637 (1178)
T ss_pred ceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCC-cEEEEEecCc
Confidence 2346677999999999998 7886 444556789999999999999999999997654 4899999999
Q ss_pred HHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------c
Q 043535 439 EIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------E 493 (881)
Q Consensus 439 e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~ 493 (881)
|.|+++|++.. ++..++.+.+.+++++++|+||+++|||++++++ .
T Consensus 638 e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~ 708 (1178)
T PLN03190 638 TSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVA 708 (1178)
T ss_pred HHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhH
Confidence 99999997532 2335677889999999999999999999996421 1
Q ss_pred cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-----------------
Q 043535 494 ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----------------- 556 (881)
Q Consensus 494 ~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----------------- 556 (881)
+.+|+||+++|+++++|++|++++++|++|+++||++||+|||+.+||.+||++||+.+++.+
T Consensus 709 ~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~ 788 (1178)
T PLN03190 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLE 788 (1178)
T ss_pred HhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999999754110
Q ss_pred c----------------------------------------CCH----HHHHHHHhhhe--eeeccCHHHHHHHHHHHhh
Q 043535 557 N----------------------------------------YTE----EEKMEKVEKIY--VMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 557 ~----------------------------------------~~~----~~~~~~~~~~~--v~~~~~p~~K~~~v~~l~~ 590 (881)
+ +.+ +++.+...++. ||||++|+||+++|+.+|+
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~ 868 (1178)
T PLN03190 789 DALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKN 868 (1178)
T ss_pred HHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHh
Confidence 0 000 12223333333 7999999999999999999
Q ss_pred c-CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 043535 591 K-GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSS 669 (881)
Q Consensus 591 ~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~ 669 (881)
. +++|+|+|||+||++||++|||||++.+.++.+|+.+|||++.+.++...+ ++.|||++|.|+.+.+.|.|++|++.
T Consensus 869 ~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rL-LlvHGr~~y~R~s~~i~y~fYKN~~~ 947 (1178)
T PLN03190 869 RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPL-LLVHGHWNYQRMGYMILYNFYRNAVF 947 (1178)
T ss_pred cCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8 579999999999999999999999987777779999999999986654444 67799999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChh---HHHHHHHHHHHHHHHHHHhc-cc--CCCccccccCCCC---CCCCCccHHHHHHHHHHHH
Q 043535 670 VLFNFLAAVLVGKNPLT---AVQLLWMNLIVLTLGALALV-TE--QPTKELMEKPPVR---LTEPLITNVMWRNLLAQAF 740 (881)
Q Consensus 670 i~~~~~~~~~~~~~pl~---~~q~l~~~~~~~~~~~l~l~-~~--~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~ 740 (881)
+++++++.+++++++.+ .+-+.++|++++.+|.++++ +| .|++.+++.|-.+ +....++.+.+..|++.|+
T Consensus 948 ~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i 1027 (1178)
T PLN03190 948 VLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTL 1027 (1178)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHH
Confidence 99999999999988865 55588899999999999985 44 3455666666544 3456788888889999999
Q ss_pred HHHHHHHHHHHhhccccCCCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHHH----
Q 043535 741 YQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVMV---- 816 (881)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---- 816 (881)
+|++++|++.+........+.....++++.+.++...+.+....+ .++++.++++.+++++.+++.
T Consensus 1028 ~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~----------~wt~~~~~~i~~Si~~~~i~~~~~~ 1097 (1178)
T PLN03190 1028 WQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDII----------RWNWITHAAIWGSIVATFICVIVID 1097 (1178)
T ss_pred HHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887755432211111111222334444444333333222111 112211222222322222111
Q ss_pred --HH---hhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 817 --EI---LKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 817 --~~---~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
+. ...++. ..-++.+|+.++++.++++++..++|.+++
T Consensus 1098 ~~~~~~~~~~~~~-~~~~~~fwl~ill~~~~~l~p~~~~~~~~~ 1140 (1178)
T PLN03190 1098 AIPTLPGYWAIFH-IAKTGSFWLCLLAIVVAALLPRFVVKVLYQ 1140 (1178)
T ss_pred hcccchhHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 011111 112577899888888889999999998875
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-94 Score=807.41 Aligned_cols=772 Identities=20% Similarity=0.270 Sum_probs=593.7
Q ss_pred CCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 043535 45 HGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQ 123 (881)
Q Consensus 45 ~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~ 123 (881)
..||+..+ +.+|+..||+|.+..+ .++++.++.++..+|++.++.+..++|.+..+ .+...++++...+.....++
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y~~YA~cI~iisv~Si~~sv~e 234 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADSYYYYAFCIVIISVYSIVLSVYE 234 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 46998877 9999999999999987 67899999999999999999999999988875 44555555556666555555
Q ss_pred HHHHHHHHHhhh-cCCceEEEeCCEEEEEeccccccCcEEEEcC-CCeeccceeEEeccceeeecC---CccccccC---
Q 043535 124 NKKFEKLLSKVS-NSIQVDVVRNKRRQQILLSNVVVGDVICLKI-GDQVPADGIFLDGHSLQIQES---DHNVEVNS--- 195 (881)
Q Consensus 124 ~~~~~~~l~~~~-~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~-G~~vPaD~~ll~g~~l~vdes---~~~v~~~~--- 195 (881)
.|+...-+.++. ...+|+|+|||.+++|+++|||||||+++.+ |-..|||+++++|++ .|||| ++++|+.+
T Consensus 235 ~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 235 TRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCCcccccccCC
Confidence 444443355554 3459999999999999999999999999999 999999999999998 89998 22244432
Q ss_pred ----------------CCCceeecccEEee------CceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHH
Q 043535 196 ----------------SQNPFLLSGTKVVD------GYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLV 253 (881)
Q Consensus 196 ----------------~~~~~l~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 253 (881)
...+.+|+||.+++ +.+.+.|+|||.+|..|++.|++.+++.....+-+...+|...+
T Consensus 314 ~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l 393 (1140)
T KOG0208|consen 314 PMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFL 393 (1140)
T ss_pred ccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHH
Confidence 24578999999986 56899999999999999999999999888888888887777777
Q ss_pred HHHHHHHHHHHHHHHh----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEe
Q 043535 254 DLIGLAITFSGLLMIL----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICT 322 (881)
Q Consensus 254 ~~i~l~~~~~~~~~~~----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~ 322 (881)
..++++..+...+... + ..+++++.+|+|||.+++++..++..||.|+||+|.+++.+...|++|++||
T Consensus 394 ~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cF 473 (1140)
T KOG0208|consen 394 VIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCF 473 (1140)
T ss_pred HHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEE
Confidence 6666554443333322 2 2234466799999999999999999999999999999999999999999999
Q ss_pred cCccccccCceEEeecCCC-----CCh----------------------HHHHHHHHHhhhccccceeeccCCCCcceee
Q 043535 323 DKTGTLTLNQMKGAADHSN-----IAP----------------------KVVELIQQGFALNTTAGFYKRTSGSGLEIEL 375 (881)
Q Consensus 323 DKTGTLT~~~m~v~~~~~~-----~~~----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (881)
|||||||++.+.+..+... ..+ .....+..+++.||+.... ....
T Consensus 474 DKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v--------~g~l 545 (1140)
T KOG0208|consen 474 DKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLV--------DGTL 545 (1140)
T ss_pred cCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEe--------CCee
Confidence 9999999999987664210 000 0112344455556533222 2356
Q ss_pred cCChHHHHHHhcccccCCC---Chh---------------------hhh----hcceEEEEecCCCCCceEEEEEeeCCC
Q 043535 376 SGSSIEKAILSWPILGMSM---DME---------------------QIR----QSCVILQVEAFNSHRKQSRVMMRKKAD 427 (881)
Q Consensus 376 ~~~p~e~al~~~~~~~~~~---~~~---------------------~~~----~~~~~~~~~~F~s~~k~~sviv~~~~~ 427 (881)
.|||+|..+++...|.+.. +.+ ... +.+.+++.+||+|..+|||||+..+++
T Consensus 546 ~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e 625 (1140)
T KOG0208|consen 546 VGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGE 625 (1140)
T ss_pred ccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCC
Confidence 8889888888766554311 000 000 147789999999999999999999988
Q ss_pred CeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC--------cccccccC
Q 043535 428 NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP--------EEELNEEN 499 (881)
Q Consensus 428 ~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~--------~~~~~e~~ 499 (881)
++..+|+|||||.|.+.|++ +..++++.+.++.|+.+|+|++|+|+|+++.. .++..|+|
T Consensus 626 ~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~ 693 (1140)
T KOG0208|consen 626 DKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESN 693 (1140)
T ss_pred CceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcc
Confidence 88999999999999999985 34467899999999999999999999999864 47889999
Q ss_pred ceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------------------
Q 043535 500 LILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------- 553 (881)
Q Consensus 500 l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------- 553 (881)
++|+|++.||+++|++++.+|++|++++||++|+||||..||..+||+||+..+
T Consensus 694 l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve 773 (1140)
T KOG0208|consen 694 LEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVE 773 (1140)
T ss_pred ceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEcc
Confidence 999999999999999999999999999999999999999999999999999876
Q ss_pred ---h-------------------------------------hhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCC
Q 043535 554 ---E-------------------------------------FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGH 593 (881)
Q Consensus 554 ---~-------------------------------------~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~ 593 (881)
. +.+..++.+..++.+..|||||+|+||.++|+.+|+.|+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y 853 (1140)
T KOG0208|consen 774 SQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGY 853 (1140)
T ss_pred CccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCc
Confidence 0 001122445666777889999999999999999999999
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFN 673 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~ 673 (881)
.|+|||||+|||.|||+||+||+.+ ..+|.-+|.|...-.+..++.+.|++||+.+...-..++|...+.+...+..
T Consensus 854 ~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv 930 (1140)
T KOG0208|consen 854 KVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISV 930 (1140)
T ss_pred EEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999997 3457778999998889999999999999999999999999887766543322
Q ss_pred HHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043535 674 FLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKG 753 (881)
Q Consensus 674 ~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (881)
+ .++.....+++.|.++++++..++-++++++.+|...+-..|| +..+++...+...++|.++..++.+..++..
T Consensus 931 ~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~ 1005 (1140)
T KOG0208|consen 931 V--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIV 1005 (1140)
T ss_pred h--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheee
Confidence 2 2344567899999999999999999999999999988877776 5678888888888888887777766665433
Q ss_pred c--cccCC--------CcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHHHHH--HHH---
Q 043535 754 E--SVLGV--------NENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQVVM--VEI--- 818 (881)
Q Consensus 754 ~--~~~~~--------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~--- 818 (881)
. .|+-. ......|..|..-.+..+++.+... ...++.+++|+|+.|...+....+..+.+ +..
T Consensus 1006 ~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S--~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~ 1083 (1140)
T KOG0208|consen 1006 EPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS--KGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFI 1083 (1140)
T ss_pred ccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec--cCCcccCchhcCceeeeehhhHHhhhhhhhhccccch
Confidence 2 33331 1223346666655555555554432 25567779999987765443333222222 111
Q ss_pred hhhhhcCCCCChhh-HHHHHHHHHHHHHHHHHH
Q 043535 819 LKKFADTEGLNWIQ-WGSCIGIAAISWPIGWFV 850 (881)
Q Consensus 819 ~~~~f~~~~l~~~~-~~~~~~~~~~~~~~~~l~ 850 (881)
...+++.++.+-.. -++++.+....+....+.
T Consensus 1084 ~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~ 1116 (1140)
T KOG0208|consen 1084 EWKLLQLTYIPTTFDRFIILLVVISYFALNYIQ 1116 (1140)
T ss_pred hhhhhceeccCcchhHHHHHHHHHHHHHHHHhh
Confidence 12456677766533 333333333344333333
No 18
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-87 Score=724.54 Aligned_cols=768 Identities=22% Similarity=0.254 Sum_probs=607.3
Q ss_pred HHhcccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 57 RRQGLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFGL------NLFIAVSIYISVSASSKYMQNKKF 127 (881)
Q Consensus 57 ~r~~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~~------~~~~~i~~~~~i~~~~~~~~~~~~ 127 (881)
.++++|-+|.+.+.|++ .++..+++||+-+.|+++++.++.++++.+ +++.|+.++.+++.+++..++.++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45778889999988776 556789999999999999999999998864 788889999999999999998888
Q ss_pred HHHHHhhhcCCceEEE-eCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccce----e--eec----C---------
Q 043535 128 EKLLSKVSNSIQVDVV-RNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSL----Q--IQE----S--------- 187 (881)
Q Consensus 128 ~~~l~~~~~~~~v~V~-Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l----~--vde----s--------- 187 (881)
.+ .|+..|+...+++ |||-..+ |++++++||+|.++.+++||||++++..++- . .|+ .
T Consensus 154 ~~-rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp 231 (1051)
T KOG0210|consen 154 RR-RDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVP 231 (1051)
T ss_pred HH-hhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccch
Confidence 88 8888888777776 5665554 9999999999999999999999999976520 0 111 0
Q ss_pred -------------------Cccc----------------cccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhh
Q 043535 188 -------------------DHNV----------------EVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQT 232 (881)
Q Consensus 188 -------------------~~~v----------------~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 232 (881)
.|+. +....-.|.++++|.+.+|.+.++|++||.+|+. ..+.
T Consensus 232 ~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs---vMNt 308 (1051)
T KOG0210|consen 232 RTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS---VMNT 308 (1051)
T ss_pred hhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH---Hhcc
Confidence 1100 0001135789999999999999999999999954 3445
Q ss_pred ccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHhhccccchHHHHHHHHHHHHHHhhc-
Q 043535 233 SYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL----------DLNAVVNLIIPEGLPLAVTVTIAYSMKRLMID- 301 (881)
Q Consensus 233 ~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~----------~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~- 301 (881)
..++.|...++..+|.+.+.+....++++++...+-. .+.-+++.+||.+|.+-+.++...-.....++
T Consensus 309 s~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~ 388 (1051)
T KOG0210|consen 309 SRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDK 388 (1051)
T ss_pred CCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCC
Confidence 5788888999999999999998888887776655432 23344466699999999999988777666654
Q ss_pred ---cccccCchhhhhccceEEEEecCccccccCceEEeecC-----------------------C-------------CC
Q 043535 302 ---HAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADH-----------------------S-------------NI 342 (881)
Q Consensus 302 ---~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~-----------------------~-------------~~ 342 (881)
|..+|++...|+||++.++.+|||||||+|+|++++.+ + ..
T Consensus 389 ~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~ 468 (1051)
T KOG0210|consen 389 NIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKD 468 (1051)
T ss_pred CCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCc
Confidence 67899999999999999999999999999999998851 0 01
Q ss_pred ChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChh-------------hhhhcceEEEEe
Q 043535 343 APKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDME-------------QIRQSCVILQVE 409 (881)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 409 (881)
.......+..++++||++.....++ +...|+..+|+|.|++++.. ..|...- ....+|+++..+
T Consensus 469 ~s~rv~~~V~alalCHNVTPv~e~~--ge~sYQAaSPDEVAiVkwTe-~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vF 545 (1051)
T KOG0210|consen 469 MSARVRNAVLALALCHNVTPVFEDD--GEVSYQAASPDEVAIVKWTE-TVGLKLAKRDRHAITLRVPLDDELNYQILQVF 545 (1051)
T ss_pred ccHHHHHHHHHHHHhccCCcccCCC--ceEEeecCCCCeEEEEEeee-ecceEEeecccceEEEecCCCcceeEEEEEEe
Confidence 1122334556788999887654222 23668899999999999987 7776432 122479999999
Q ss_pred cCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCC
Q 043535 410 AFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVP 489 (881)
Q Consensus 410 ~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~ 489 (881)
||+|+.|||++||+++..+++..|.|||+..|..... ..+++++...+++.+|+|++.+|.|.++
T Consensus 546 PFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWleEE~gNMAREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 546 PFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLEEECGNMAREGLRTLVVAKKVLS 610 (1051)
T ss_pred ccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhhhhhhhhhhhcceEEEEEecccC
Confidence 9999999999999999888899999999998865443 2468899999999999999999999998
Q ss_pred CCc--------------------------ccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 043535 490 VPE--------------------------EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA 543 (881)
Q Consensus 490 ~~~--------------------------~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ 543 (881)
+.+ +..+|.|++++|++++||+++++++.+++.||+||||+||+|||+.+||..
T Consensus 611 ~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~c 690 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAIC 690 (1051)
T ss_pred HHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheee
Confidence 632 125689999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCch------------------hhh---------------------cCCHHHHHHHHhhh--eeeeccCHHHHH
Q 043535 544 IATQCGILKP------------------EFR---------------------NYTEEEKMEKVEKI--YVMARASPDDKL 582 (881)
Q Consensus 544 ia~~~gi~~~------------------~~~---------------------~~~~~~~~~~~~~~--~v~~~~~p~~K~ 582 (881)
+|+..++... +++ +.-++|+.+...++ .++||++|+||+
T Consensus 691 iAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 691 IAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred eehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 9999999764 111 01134555554443 489999999999
Q ss_pred HHHHHHhhc-CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH-HHHHhHHHHHHHHHHHH
Q 043535 583 AMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT-LLNWGRCVYVNIQKFIQ 660 (881)
Q Consensus 583 ~~v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~-~i~~gR~~~~~i~~~i~ 660 (881)
++++.+|++ |.+|++||||.||+.|+++||+||++.++++.+|.-+||+.+.+ |+.+.+ ++.|||.+|.|..+.-+
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laq 848 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQ 848 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHH
Confidence 999999987 89999999999999999999999999889999999999999997 555555 56789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHHHHHHHHhcccCC--CccccccCCCC---CCCCCccHHHH
Q 043535 661 FHLTISVSSVLFNFLAAVLVGKNPLTAVQ---LLWMNLIVLTLGALALVTEQP--TKELMEKPPVR---LTEPLITNVMW 732 (881)
Q Consensus 661 ~~~~~n~~~i~~~~~~~~~~~~~pl~~~q---~l~~~~~~~~~~~l~l~~~~~--~~~~~~~~p~~---~~~~~~~~~~~ 732 (881)
|.+...++...++.+++..+.+.|...+| +..+..+++++|.+++..+.. ++..+..|..+ .+++.++-+.+
T Consensus 849 fViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF 928 (1051)
T KOG0210|consen 849 FVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTF 928 (1051)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhh
Confidence 99999999999999998888888888888 555788899999999988764 33334444322 24567788888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCcccchhHHHHHHHHHHHHhhHhhhccccccccccCcchHHHHHHHHHHHHHH
Q 043535 733 RNLLAQAFYQIAVLLTLLFKGESVLGVNENVKDTMIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKSFLGIIGITIVLQ 812 (881)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 812 (881)
..|+..++||+.++.+..+. .+..+.....++.|.++++..+......-+ .+++.+..+-+.++.+.
T Consensus 929 ~iwvLISiYQG~vim~g~~~---l~~~ef~~ivaisFtaLi~tELiMVaLtv~----------tw~~~m~vae~lsL~~Y 995 (1051)
T KOG0210|consen 929 FIWVLISIYQGSVIMYGALL---LFDTEFIHIVAISFTALILTELIMVALTVR----------TWHWLMVVAELLSLALY 995 (1051)
T ss_pred hhhhhHHHHcccHHHHHHHH---HhhhhheEeeeeeeHHHHHHHHHHHhhhhh----------hhhHHHHHHHHHHHHHH
Confidence 89999999999876543221 233334455788888888888766543322 24555556666777777
Q ss_pred HHHHHHhhhhhcCCCC-ChhhHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q 043535 813 VVMVEILKKFADTEGL-NWIQWGSCIGIAAISWPIGWFVKCIPVPAKSLSY 862 (881)
Q Consensus 813 ~~~~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~~~~l~k~~~~~~~~~~~ 862 (881)
++.++++.++|+...+ +|.+.+...++.++..++.++.|.++|+.+|=.|
T Consensus 996 ivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSY 1046 (1051)
T KOG0210|consen 996 IVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSY 1046 (1051)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch
Confidence 7777888888776543 4556666777888888999999999985555444
No 19
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.3e-81 Score=727.52 Aligned_cols=524 Identities=22% Similarity=0.318 Sum_probs=420.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---ce
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGLN----------------LFIAVSIYISVSASSKYMQNKKFEKLLSKVSNSI---QV 140 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~~----------------~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~---~v 140 (881)
..+|++|+.++++++++++++.+.. +++.+++..+++.+.|.+++++.++.++++++.. ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 4678999999999999999876531 1233334444555555555666666677665432 46
Q ss_pred E-EEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCC---ceeecccEEeeCce
Q 043535 141 D-VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQN---PFLLSGTKVVDGYG 212 (881)
Q Consensus 141 ~-V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~---~~l~aGt~v~~g~~ 212 (881)
+ |.|||++++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.+ +.+|+||.+.+|++
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES-~PV~K~~g~d~~~V~aGT~v~~G~~ 184 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGES-APVIKESGGDFDNVIGGTSVASDWL 184 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCC-CceeccCCCccCeeecCceeecceE
Confidence 5 7799999999999999999999999999999999999987 99998 44 55555565 67999999999999
Q ss_pred eEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHH-------HHHHhhccccc
Q 043535 213 RMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMI--LDLN-------AVVNLIIPEGL 283 (881)
Q Consensus 213 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~~-------~~l~i~iP~~L 283 (881)
.++|+++|.+|++||+.++++..+.+++|+|.....+...+..+.+++.+..+.+. .++. .+...+|||+|
T Consensus 185 ~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 185 EVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 99999999999999999999988889999998777665554443333222221111 0111 11123389999
Q ss_pred hHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhcccccee
Q 043535 284 PLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFY 363 (881)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 363 (881)
+..+++....++++|+++|+++|+++++|++|++|++|||||||||+|++.+.+..+....+..+.+.. ...|+.
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~-a~~~~~---- 339 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKA-AYESSI---- 339 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHH-HHHhcC----
Confidence 999999999999999999999999999999999999999999999998877665432222222233332 223321
Q ss_pred eccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHH
Q 043535 364 KRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILA 443 (881)
Q Consensus 364 ~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~ 443 (881)
. +.||.++|+++++. +.+.+.... ..+..||++++|+|++.++ +. .+.||+++.+++
T Consensus 340 --~---------s~~P~~~AIv~~a~-~~~~~~~~~-----~~~~~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~ 396 (673)
T PRK14010 340 --A---------DDTPEGRSIVKLAY-KQHIDLPQE-----VGEYIPFTAETRMSGVKFT---TR---EVYKGAPNSMVK 396 (673)
T ss_pred --C---------CCChHHHHHHHHHH-HcCCCchhh-----hcceeccccccceeEEEEC---CE---EEEECCHHHHHH
Confidence 1 23799999999886 544443211 1235799999999998753 22 345999999999
Q ss_pred hccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHH
Q 043535 444 MCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDC 523 (881)
Q Consensus 444 ~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l 523 (881)
+|+. +|... +..+.+..++++++|+|+++++ .|++++|+++++|++|||++++|++|
T Consensus 397 ~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~v~-------------~~~~~lG~i~l~Dp~R~~a~e~I~~L 453 (673)
T PRK14010 397 RVKE----AGGHI------PVDLDALVKGVSKKGGTPLVVL-------------EDNEILGVIYLKDVIKDGLVERFREL 453 (673)
T ss_pred Hhhh----cCCCC------chHHHHHHHHHHhCCCeEEEEE-------------ECCEEEEEEEeecCCcHHHHHHHHHH
Confidence 9974 12111 1235566778899999999876 37799999999999999999999999
Q ss_pred HhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCcc
Q 043535 524 QYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIK 603 (881)
Q Consensus 524 ~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~N 603 (881)
|++||+++|+|||++.||.++|+++|++. +|+|++|+||.++|+.+|++|+.|+|+|||.|
T Consensus 454 r~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvN 514 (673)
T PRK14010 454 REMGIETVMCTGDNELTAATIAKEAGVDR-------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTN 514 (673)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChh
Confidence 99999999999999999999999999987 99999999999999999999999999999999
Q ss_pred CHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 604 DAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 604 D~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+|||++|||||||| +|++.||++||+|++++|+..+++++++||++|.|+++++.|.++.|+...+..+..
T Consensus 515 DAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a 586 (673)
T PRK14010 515 DAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPA 586 (673)
T ss_pred hHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999999999999999776554443
No 20
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-82 Score=684.45 Aligned_cols=630 Identities=23% Similarity=0.356 Sum_probs=514.2
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----
Q 043535 28 QQFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG----- 102 (881)
Q Consensus 28 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~----- 102 (881)
.+-+.+|++.+.|.+... |||++| +++|+++||+|++.+++.+.+.+ |+.-|.+|..+..-.+|++...+.
T Consensus 18 l~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lK-Fl~Fm~~PlswVMEaAAimA~~Lang~~~ 93 (942)
T KOG0205|consen 18 LEAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLK-FLGFMWNPLSWVMEAAAIMAIGLANGGGR 93 (942)
T ss_pred cccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHH-HHHHHhchHHHHHHHHHHHHHHHhcCCCC
Confidence 466789999999988755 999999 99999999999999876655554 466688888888888888876553
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEE
Q 043535 103 ---LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVSNS--IQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFL 177 (881)
Q Consensus 103 ---~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~~--~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll 177 (881)
|.-|..+...+++++...|.+|.++-.+.+.+... .+..|+|||+|.++++++||||||+.++.||+||||++++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 34555555555667766777887777666665443 4899999999999999999999999999999999999999
Q ss_pred eccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHH
Q 043535 178 DGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLV 253 (881)
Q Consensus 178 ~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~ 253 (881)
+|+-+++|+| |+ .++++++++.+|+||.|.+|++.++|++||.+|..|+-+..+.. ......+++-++.+..++
T Consensus 174 ~gD~LkiDQSAlTGES-LpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~c 251 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGES-LPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFC 251 (942)
T ss_pred cCCccccchhhhcCCc-cccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHH
Confidence 9999999998 44 88888899999999999999999999999999999999998866 677788999988887766
Q ss_pred HHHHHHHHHHHHHHHh----h-HH----HHH-H-hh-ccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEE
Q 043535 254 DLIGLAITFSGLLMIL----D-LN----AVV-N-LI-IPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVIC 321 (881)
Q Consensus 254 ~~i~l~~~~~~~~~~~----~-~~----~~l-~-i~-iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~ 321 (881)
.....+..++.+.+.+ . +. .++ + +- +|.++|..+++.++.++.||+++|.++|+..++|+++.+|++|
T Consensus 252 i~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLC 331 (942)
T KOG0205|consen 252 ICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (942)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEe
Confidence 5443332222222222 1 11 111 2 22 9999999999999999999999999999999999999999999
Q ss_pred ecCccccccCceEEeec-----CCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCCh
Q 043535 322 TDKTGTLTLNQMKGAAD-----HSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDM 396 (881)
Q Consensus 322 ~DKTGTLT~~~m~v~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~ 396 (881)
+|||||||.|++.+.+- ..+.+++.. + ...+..+ .. ...|.+|.|++.... |+
T Consensus 332 SDKTGTLTlNkLSvdknl~ev~v~gv~~D~~--~-L~A~rAs--r~------------en~DAID~A~v~~L~-----dP 389 (942)
T KOG0205|consen 332 SDKTGTLTLNKLSVDKNLIEVFVKGVDKDDV--L-LTAARAS--RK------------ENQDAIDAAIVGMLA-----DP 389 (942)
T ss_pred ecCcCceeecceecCcCcceeeecCCChHHH--H-HHHHHHh--hh------------cChhhHHHHHHHhhc-----CH
Confidence 99999999999998772 223333322 1 1122221 11 123689999998654 45
Q ss_pred hhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhc
Q 043535 397 EQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAG 476 (881)
Q Consensus 397 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 476 (881)
.+.+..++.++..||++..||-+..+.+++|+ .+-.+|||||.|++.|.. +.+.++...+.+++++++
T Consensus 390 Keara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeR 457 (942)
T KOG0205|consen 390 KEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAER 457 (942)
T ss_pred HHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHh
Confidence 77888999999999999999999999998877 666699999999999974 245678888999999999
Q ss_pred chhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch---
Q 043535 477 SLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--- 553 (881)
Q Consensus 477 g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--- 553 (881)
|+|-+++|++..++...+.......|+|+.-+-||||.+..++|++....|.+|.|+|||...-++..++++|+-..
T Consensus 458 GlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp 537 (942)
T KOG0205|consen 458 GLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (942)
T ss_pred cchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC
Confidence 99999999999998888777888999999999999999999999999999999999999999999999999998654
Q ss_pred --hh------hcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHH
Q 043535 554 --EF------RNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVA 625 (881)
Q Consensus 554 --~~------~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a 625 (881)
++ +.+......+.+++..-|+.+.|++|.++|+.||++++.++|+|||.||+|+||.||+|||+. .+++.+
T Consensus 538 ss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaa 616 (942)
T KOG0205|consen 538 SSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAA 616 (942)
T ss_pred chhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhh
Confidence 11 112223566777788889999999999999999999999999999999999999999999999 999999
Q ss_pred HhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 043535 626 KESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLT 699 (881)
Q Consensus 626 ~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~ 699 (881)
+.++|+|+++..++.+..++..+|.+|+|++.+..|.++..+-.++...+.. .....-++|...+++.++.|.
T Consensus 617 r~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~a-lIw~~df~pfmvliiailnd~ 689 (942)
T KOG0205|consen 617 RSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSPFMVLIIAILNDG 689 (942)
T ss_pred cccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999998887775442222221 112233555555665555553
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.2e-79 Score=707.90 Aligned_cols=516 Identities=21% Similarity=0.299 Sum_probs=416.4
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCceE
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGL---------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN---SIQVD 141 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~---------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~---~~~v~ 141 (881)
..||++|+.++++++++++++.++ .+.+.+++.+++..+.+.+++.+.++.++++.+ ..+++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 568999999999999999987651 222334444555555565666555554555544 23699
Q ss_pred EEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCce---eecccEEeeCcee
Q 043535 142 VVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPF---LLSGTKVVDGYGR 213 (881)
Q Consensus 142 V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~---l~aGt~v~~g~~~ 213 (881)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.++. +|+||.+.+|++.
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES-~PV~K~~G~~~~~V~aGT~v~~G~~~ 185 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGES-APVIRESGGDFSSVTGGTRVLSDWIV 185 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCC-CceEeCCCCccCeEEeceEEEeeeEE
Confidence 999988 8999999999999999999999999999999975 99998 44 5555556555 9999999999999
Q ss_pred EEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---h-----HHHHHHhhccccch
Q 043535 214 MLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLM-IL---D-----LNAVVNLIIPEGLP 284 (881)
Q Consensus 214 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~-~~---~-----~~~~l~i~iP~~L~ 284 (881)
++|+++|.+|.+||+.+.++..+.+++|++...+.+...+..+.++++...+.+ ++ . ...++.++|||+|+
T Consensus 186 i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg 265 (679)
T PRK01122 186 IRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIG 265 (679)
T ss_pred EEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhh
Confidence 999999999999999999998888899999888887766655444333332222 11 1 11222444999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceee
Q 043535 285 LAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYK 364 (881)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 364 (881)
..++.....++++++++|+++|+.+++|++|++|++|||||||||+|+|++.+.......+..+ +.....+|+.+
T Consensus 266 ~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~-ll~~a~~~s~~---- 340 (679)
T PRK01122 266 GLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEE-LADAAQLSSLA---- 340 (679)
T ss_pred hHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHH-HHHHHHHhcCC----
Confidence 9999999999999999999999999999999999999999999999999998764321111222 33333333211
Q ss_pred ccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHh
Q 043535 365 RTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAM 444 (881)
Q Consensus 365 ~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~ 444 (881)
+.||.++|+++++....+.+.. +..++..+..||++.+++|++.+. + ..+.||++|.+++.
T Consensus 341 -----------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF~s~~~~~gv~~~---g---~~~~kGa~e~il~~ 401 (679)
T PRK01122 341 -----------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPFSAQTRMSGVDLD---G---REIRKGAVDAIRRY 401 (679)
T ss_pred -----------CCCchHHHHHHHHHhhcCCCch--hhccccceeEeecCcCceEEEEEC---C---EEEEECCHHHHHHH
Confidence 2368899999987621333221 222456778999999988887542 2 46799999999999
Q ss_pred ccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHH
Q 043535 445 CSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQ 524 (881)
Q Consensus 445 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~ 524 (881)
|... |. ..++++.+..++++++|.|++++|+ |++++|+++++|++|||++++|++||
T Consensus 402 ~~~~----g~------~~~~~~~~~~~~~a~~G~~~l~va~-------------~~~~lG~i~l~D~~R~~~~eai~~Lr 458 (679)
T PRK01122 402 VESN----GG------HFPAELDAAVDEVARKGGTPLVVAE-------------DNRVLGVIYLKDIVKPGIKERFAELR 458 (679)
T ss_pred HHhc----CC------cChHHHHHHHHHHHhCCCcEEEEEE-------------CCeEEEEEEEeccCchhHHHHHHHHH
Confidence 9641 21 1235677788899999999999993 67899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccC
Q 043535 525 YAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKD 604 (881)
Q Consensus 525 ~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND 604 (881)
++||+++|+|||++.||.++|+++|++. +++|++|+||.++|+.+|++|+.|+|+|||.||
T Consensus 459 ~~GI~vvMiTGDn~~TA~aIA~elGId~-------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvND 519 (679)
T PRK01122 459 KMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTND 519 (679)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcch
Confidence 9999999999999999999999999987 999999999999999999999999999999999
Q ss_pred HHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 043535 605 APALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664 (881)
Q Consensus 605 ~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (881)
+|||++|||||||+ +|++.+|++||+|++++|+..+++++++||+..-.-...-.|++.
T Consensus 520 APALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 520 APALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 99999999999999 999999999999999999999999999999999654455667765
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=6.7e-82 Score=748.21 Aligned_cols=676 Identities=22% Similarity=0.291 Sum_probs=542.9
Q ss_pred HhcccCCCccCCCCCC---cHHHHHHHHhhHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 58 RQGLFGSNTYKKPPTE---SFFSFVVDTFKSFTVLILFVCAILSLAFG-----LNLFIAVSIYISVSASSKYMQNKKFEK 129 (881)
Q Consensus 58 r~~~yG~N~i~~~~~~---~~~~~l~~~f~~~~~~~ll~~ail~~~~~-----~~~~~~i~~~~~i~~~~~~~~~~~~~~ 129 (881)
+...|-.|.+...|++ .+++.+++||+++.|++|++.+++++++- +..++|+++++.++++++..++.++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~ 107 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFVLGITAIKDAIEDYRRHK 107 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeeeehHHHHHHHHhhhhhhh
Confidence 5569999999988776 55688999999999999999999999872 167889999999999999999999999
Q ss_pred HHHhhhcCCceEEEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccc-----------------eeeecC----
Q 043535 130 LLSKVSNSIQVDVVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS-----------------LQIQES---- 187 (881)
Q Consensus 130 ~l~~~~~~~~v~V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~-----------------l~vdes---- 187 (881)
.|+..|+.++.|.|++. +++..|++|++||+|.+..++.+|||.++++++. +.+..+
T Consensus 108 -~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~ 186 (1151)
T KOG0206|consen 108 -QDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECT 186 (1151)
T ss_pred -ccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhh
Confidence 99988999999999644 8999999999999999999999999999998763 111000
Q ss_pred -------------------Cccc---------c----c-cCCCCceeecccEEeeC-ceeEEEEEEeccchhhHHHhhhc
Q 043535 188 -------------------DHNV---------E----V-NSSQNPFLLSGTKVVDG-YGRMLATAVGMNTTWGQIMRQTS 233 (881)
Q Consensus 188 -------------------~~~v---------~----~-~~~~~~~l~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 233 (881)
.|+. . . ...+.+++++|+.+.+. .+.+.|+.||.+|.. +++..
T Consensus 187 ~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~---~~n~~ 263 (1151)
T KOG0206|consen 187 SKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL---MQNSG 263 (1151)
T ss_pred hcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH---HHhcC
Confidence 0000 0 0 11245678999999987 579999999999965 44455
Q ss_pred cCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------h------HHHHH------Hhhccccc
Q 043535 234 YNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------------------D------LNAVV------NLIIPEGL 283 (881)
Q Consensus 234 ~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------------------~------~~~~l------~i~iP~~L 283 (881)
.++.+++++++.++.....+..+.+.++++..+... + +..++ ..++|.+|
T Consensus 264 ~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISL 343 (1151)
T KOG0206|consen 264 KPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISL 343 (1151)
T ss_pred CCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEE
Confidence 688999999999999988877777766665554322 0 11112 22399999
Q ss_pred hHHHHHHHHHHHHH------Hh----hccccccCchhhhhccceEEEEecCccccccCceEEeecCC-------------
Q 043535 284 PLAVTVTIAYSMKR------LM----IDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHS------------- 340 (881)
Q Consensus 284 ~~~~~~~~~~~~~~------l~----~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~------------- 340 (881)
.+.+.+.....+.. |. ...+.+|+.+..|+||+|++|++|||||||+|.|++.++..
T Consensus 344 yvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~ 423 (1151)
T KOG0206|consen 344 YVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVE 423 (1151)
T ss_pred EEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhh
Confidence 98888776655422 22 23688999999999999999999999999999999888510
Q ss_pred ------C---------------------------CChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhc
Q 043535 341 ------N---------------------------IAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSW 387 (881)
Q Consensus 341 ------~---------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~ 387 (881)
. ........+..++++||++..+.. .++....|...+|+|.|+++.
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~-~~~~~~~Y~A~SPDE~AlV~a 502 (1151)
T KOG0206|consen 424 AALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD-EDSGKLSYEAESPDEAALVEA 502 (1151)
T ss_pred cccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC-CCccceeeecCCCcHHHHHHH
Confidence 0 011223345667888988766541 222245788999999999998
Q ss_pred ccccCCCChh------------hhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCce
Q 043535 388 PILGMSMDME------------QIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNV 455 (881)
Q Consensus 388 ~~~~~~~~~~------------~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~ 455 (881)
++ ..|..+. ...+.|++++..+|+|.|||||||+|.+++ ++.+|||||+..|.++++..
T Consensus 503 Ar-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g-~i~LycKGADsvI~erL~~~------- 573 (1151)
T KOG0206|consen 503 AR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDG-RILLYCKGADSVIFERLSKN------- 573 (1151)
T ss_pred HH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCC-cEEEEEcCcchhhHhhhhhc-------
Confidence 87 7776442 124579999999999999999999999877 59999999999999999851
Q ss_pred ecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc-------------------------ccccccCceeeeeccccC
Q 043535 456 KHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE-------------------------EELNEENLILLGLLGIKD 510 (881)
Q Consensus 456 ~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~-------------------------~~~~e~~l~~lG~i~~~D 510 (881)
....++.-.+++++|+.+|+|++++|||++++++ .+.+|+||+++|.+++||
T Consensus 574 ---~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIED 650 (1151)
T KOG0206|consen 574 ---GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIED 650 (1151)
T ss_pred ---chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeec
Confidence 2456677788999999999999999999998733 246799999999999999
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-----cCC--------------------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR-----NYT-------------------------- 559 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~-------------------------- 559 (881)
+++++++++|++|++||||+||+|||+.+||.+|+.+|++..++.. ..+
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 730 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELE 730 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999999999999999999999875111 000
Q ss_pred -------------------------HH---HHHHH--HhhheeeeccCHHHHHHHHHHHhhc-CCEEEEEcCCccCHHHH
Q 043535 560 -------------------------EE---EKMEK--VEKIYVMARASPDDKLAMVKCLKLK-GHVVAVTGNGIKDAPAL 608 (881)
Q Consensus 560 -------------------------~~---~~~~~--~~~~~v~~~~~p~~K~~~v~~l~~~-g~~v~~iGDg~ND~~~l 608 (881)
++ .+.+. -++..++||++|.||+.+|+..++. +..+++||||+||++|+
T Consensus 731 ~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMI 810 (1151)
T KOG0206|consen 731 EAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMI 810 (1151)
T ss_pred HHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchhe
Confidence 00 00111 1234599999999999999999855 88999999999999999
Q ss_pred HhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---h
Q 043535 609 EEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNP---L 685 (881)
Q Consensus 609 ~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~p---l 685 (881)
++|||||++++.++.+|..+||+.+.+..+.... ++.|||+.|.|+.+++.|.+|+|+.+.+.+|++.++++++. +
T Consensus 811 Q~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~y 889 (1151)
T KOG0206|consen 811 QEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLY 889 (1151)
T ss_pred eeCCcCeeeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Confidence 9999999999999999999999999998887777 88999999999999999999999999999999999998765 4
Q ss_pred hHHHHHHHHHHHHHHHHHHhc---ccCCCccccccCCCCC---CCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 686 TAVQLLWMNLIVLTLGALALV---TEQPTKELMEKPPVRL---TEPLITNVMWRNLLAQAFYQIAVLLTLLF 751 (881)
Q Consensus 686 ~~~q~l~~~~~~~~~~~l~l~---~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (881)
..+++.++|++++.+|.+.++ .|.+++.+++.|-.++ ....++...++.|+..++++++++|++.+
T Consensus 890 d~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 890 DDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred cceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 466788899999999999996 3455666677765443 34478888888899999999988775443
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.7e-75 Score=677.38 Aligned_cols=519 Identities=20% Similarity=0.298 Sum_probs=414.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCc
Q 043535 80 VDTFKSFTVLILFVCAILSLAFGL-----------------NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN---SIQ 139 (881)
Q Consensus 80 ~~~f~~~~~~~ll~~ail~~~~~~-----------------~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~---~~~ 139 (881)
..||++|..++++++++++++.++ .+.+.+++.+++..+.+.+++++.++.++++.+ ...
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 468999999999999999987632 112223333344444444455444444555543 335
Q ss_pred eEEEe-CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCc---eeecccEEeeCc
Q 043535 140 VDVVR-NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNP---FLLSGTKVVDGY 211 (881)
Q Consensus 140 v~V~R-dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~---~l~aGt~v~~g~ 211 (881)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .+||| |+ .|+.++.++ .+|+||.+.+|+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES-~PV~K~~g~~~~~V~aGT~v~~G~ 184 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGES-APVIKESGGDFASVTGGTRILSDW 184 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCC-CceeecCCCCcceeecCcEEEeeE
Confidence 78886 8999999999999999999999999999999999965 99998 33 555444554 399999999999
Q ss_pred eeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-h-------HHHHHHhhcccc
Q 043535 212 GRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMI-L-D-------LNAVVNLIIPEG 282 (881)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~-~-~-------~~~~l~i~iP~~ 282 (881)
+.++|+++|.+|++||+.+.++..+.+++|+|...+.+...+..+.+++.+..+.+. + . ...++.++|||+
T Consensus 185 ~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~aiP~a 264 (675)
T TIGR01497 185 LVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264 (675)
T ss_pred EEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhCchh
Confidence 999999999999999999999988888999998888877666554443333322221 1 1 112224459999
Q ss_pred chHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccce
Q 043535 283 LPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGF 362 (881)
Q Consensus 283 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 362 (881)
|+...+.....++++++++|+++|+.+++|++|++|++|||||||||+|+|++.+.......+..+. ....++++.
T Consensus 265 Lg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~l-l~~aa~~~~--- 340 (675)
T TIGR01497 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTL-ADAAQLASL--- 340 (675)
T ss_pred hhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHH-HHHHHHhcC---
Confidence 8888887777899999999999999999999999999999999999999999988643221122222 233333321
Q ss_pred eeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHH
Q 043535 363 YKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIIL 442 (881)
Q Consensus 363 ~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~ 442 (881)
. +.||.++|+++++. +.+.+... ..++..+..||++.+++|++.+. ++ ..+.||++|.++
T Consensus 341 ---~---------s~hP~a~Aiv~~a~-~~~~~~~~--~~~~~~~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~ 400 (675)
T TIGR01497 341 ---A---------DDTPEGKSIVILAK-QLGIREDD--VQSLHATFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIK 400 (675)
T ss_pred ---C---------CCCcHHHHHHHHHH-HcCCCccc--cccccceEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHH
Confidence 1 24699999999887 55544322 12345678999999887776543 22 467899999999
Q ss_pred HhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHH
Q 043535 443 AMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVED 522 (881)
Q Consensus 443 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~ 522 (881)
+.|.. +|.. .++.+++.+++++++|.|++++|+ |.+++|+++++|++||+++++|++
T Consensus 401 ~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~-------------~~~~lG~i~l~D~~Rp~a~eaI~~ 457 (675)
T TIGR01497 401 RHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE-------------DNRIYGVIYLKDIVKGGIKERFAQ 457 (675)
T ss_pred HHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-------------CCEEEEEEEecccchhHHHHHHHH
Confidence 88853 1211 124567778899999999999995 468999999999999999999999
Q ss_pred HHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCc
Q 043535 523 CQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGI 602 (881)
Q Consensus 523 l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ 602 (881)
||++|++++|+|||+..+|.++|+++|++. +++|++|++|.++++.+|++|+.|+|+|||.
T Consensus 458 l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~ 518 (675)
T TIGR01497 458 LRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGT 518 (675)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 999999999999999999999999999987 8999999999999999999999999999999
Q ss_pred cCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 043535 603 KDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISV 667 (881)
Q Consensus 603 ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~ 667 (881)
||+|||++||+||||+ ++++.++++||++++++|+..+++++++||+.+-+-.....|++..++
T Consensus 519 NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 519 NDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred chHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 9999999999999999 999999999999999999999999999999999998888889887655
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-75 Score=640.33 Aligned_cols=786 Identities=18% Similarity=0.215 Sum_probs=563.4
Q ss_pred CHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHHHHH
Q 043535 32 GTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFGL--NLFIAV 109 (881)
Q Consensus 32 ~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~~--~~~~~i 109 (881)
.+++....++.+ +|++ ++.+++.-.++||+|....+ .++|..+|+++-..|++.++.++..+|+...+ ..+..+
T Consensus 149 p~~~~~g~~~k~--~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDeyWYySlFtL 224 (1160)
T KOG0209|consen 149 PTDEPFGYFQKS--TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLDEYWYYSLFTL 224 (1160)
T ss_pred CcCCcchhhhhc--cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhHHHHHHHHHHH
Confidence 445556666654 5777 45457777788999999987 57889999999999999888888888887653 344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ceEEEeCCEEEEEeccccccCcEEEEcC---CCeeccceeEEeccceeee
Q 043535 110 SIYISVSASSKYMQNKKFEKLLSKVSNSI-QVDVVRNKRRQQILLSNVVVGDVICLKI---GDQVPADGIFLDGHSLQIQ 185 (881)
Q Consensus 110 ~~~~~i~~~~~~~~~~~~~~~l~~~~~~~-~v~V~Rdg~~~~I~~~~Lv~GDII~l~~---G~~vPaD~~ll~g~~l~vd 185 (881)
++++.+.+...+++-+.+.. .+++.++. .+.|+|+++|+.+.++||.|||+|.+.. ...||||.+++.|++ .||
T Consensus 225 fMli~fE~tlV~Qrm~~lse-~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVn 302 (1160)
T KOG0209|consen 225 FMLIAFEATLVKQRMRTLSE-FRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVN 302 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eec
Confidence 55566677667777777777 67776654 8999999999999999999999999987 568999999999998 899
Q ss_pred cC---CccccccC-----------------CCCceeecccEEee-------------CceeEEEEEEeccchhhHHHhhh
Q 043535 186 ES---DHNVEVNS-----------------SQNPFLLSGTKVVD-------------GYGRMLATAVGMNTTWGQIMRQT 232 (881)
Q Consensus 186 es---~~~v~~~~-----------------~~~~~l~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~ 232 (881)
|+ ++++|.-+ ++.+.+|+||.+++ |-+.+.|++||.+|..|+++|.+
T Consensus 303 EaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRti 382 (1160)
T KOG0209|consen 303 EAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTI 382 (1160)
T ss_pred hhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeE
Confidence 87 11133211 14467999999985 56889999999999999999998
Q ss_pred ccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hHHHHH------HhhccccchHHHHHHHHHHHHHHhh
Q 043535 233 SYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL------DLNAVV------NLIIPEGLPLAVTVTIAYSMKRLMI 300 (881)
Q Consensus 233 ~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~------~~~~~l------~i~iP~~L~~~~~~~~~~~~~~l~~ 300 (881)
....++.|.-.+..--|.-++.+++++.+..+|.-+. .+.-++ +-++|+-||+-++++...+...|+|
T Consensus 383 lf~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak 462 (1160)
T KOG0209|consen 383 LFSAERVTANNRETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAK 462 (1160)
T ss_pred EecceeeeeccHHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHH
Confidence 8877766654433322222222222222221111111 122222 3449999999999999999999999
Q ss_pred ccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChH--------HHHHHHHHhhhccccceeeccCCCCcc
Q 043535 301 DHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPK--------VVELIQQGFALNTTAGFYKRTSGSGLE 372 (881)
Q Consensus 301 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (881)
.+++|..+-.+.-.|++|+.|||||||||+..|.+.++.....++ ....-.+.++.||+.... +
T Consensus 463 ~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~l--------e 534 (1160)
T KOG0209|consen 463 LGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLL--------E 534 (1160)
T ss_pred hceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHh--------c
Confidence 999999999999999999999999999999999998863311110 011112234445442221 2
Q ss_pred eeecCChHHHHHHhcccccCCCCh-----hhhhhcceEEEEecCCCCCceEEEEEeeCCC---CeEEEEEeCCHHHHHHh
Q 043535 373 IELSGSSIEKAILSWPILGMSMDM-----EQIRQSCVILQVEAFNSHRKQSRVMMRKKAD---NTVHVHWKGAAEIILAM 444 (881)
Q Consensus 373 ~~~~~~p~e~al~~~~~~~~~~~~-----~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~---~~~~l~~KGa~e~i~~~ 444 (881)
....|||.|+|.++...|...-+- +...+..++.+.+.|+|..|||+|++..... .++.+.+|||||.|.++
T Consensus 535 ~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~m 614 (1160)
T KOG0209|consen 535 DKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEM 614 (1160)
T ss_pred CcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHH
Confidence 247999999999998765443221 1111246789999999999999999986542 35899999999999987
Q ss_pred ccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--------CcccccccCceeeeeccccCCCCccH
Q 043535 445 CSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV--------PEEELNEENLILLGLLGIKDPCRPGL 516 (881)
Q Consensus 445 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~--------~~~~~~e~~l~~lG~i~~~D~~r~~~ 516 (881)
.. +.++++++...+|+.+|.||+|++||.+.. .+++..|+||+|.|++.|.-|+|+|+
T Consensus 615 l~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds 680 (1160)
T KOG0209|consen 615 LR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDS 680 (1160)
T ss_pred HH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccH
Confidence 65 346788999999999999999999999974 34788999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-------------------hh---------------------
Q 043535 517 KKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------------------FR--------------------- 556 (881)
Q Consensus 517 ~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------------------~~--------------------- 556 (881)
+++|+.|++.+++++|+||||+.||.++|+++|+.... .+
T Consensus 681 ~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~d 760 (1160)
T KOG0209|consen 681 KKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHD 760 (1160)
T ss_pred HHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhh
Confidence 99999999999999999999999999999999997640 00
Q ss_pred ---------cC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH--
Q 043535 557 ---------NY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV-- 624 (881)
Q Consensus 557 ---------~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-- 624 (881)
.+ ..+.+.+.+.++.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||.- ++.+.
T Consensus 761 lcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~ 839 (1160)
T KOG0209|consen 761 LCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESK 839 (1160)
T ss_pred hhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhh
Confidence 00 012345667778899999999999999999999999999999999999999999999986 33221
Q ss_pred ---------------------------------------------------------------------HHhhcCeeecc
Q 043535 625 ---------------------------------------------------------------------AKESSDIIILD 635 (881)
Q Consensus 625 ---------------------------------------------------------------------a~~~ad~vl~~ 635 (881)
|.-+|.+.-..
T Consensus 840 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~ 919 (1160)
T KOG0209|consen 840 KDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKL 919 (1160)
T ss_pred hHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccccccccc
Confidence 11234444444
Q ss_pred CCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhcccCCCcccc
Q 043535 636 DNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALALVTEQPTKELM 715 (881)
Q Consensus 636 ~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~ 715 (881)
.+.+++.+.|+.||+...+.-+.+...-...++.. ...+.++.-..-+++.|...-.+++ ....+.+...+|-+.+.
T Consensus 920 asv~~v~~IIrQGRctLVtTlQMfKILALN~LisA--YslSvlyldGVKfgD~QaTisGlLl-a~cFlfISrskPLetLS 996 (1160)
T KOG0209|consen 920 ASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISA--YSLSVLYLDGVKFGDTQATISGLLL-AACFLFISRSKPLETLS 996 (1160)
T ss_pred chHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCceecchhHhHHHHHH-HHHHhheecCCchhhHh
Confidence 56788899999999999987776654433222221 1222344444556666655533332 22345566788888888
Q ss_pred ccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc----cC------CCcccchhHHHHHHHHHHHHhhHhhhc
Q 043535 716 EKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESV----LG------VNENVKDTMIFNTFVLCQVFNEFNARK 785 (881)
Q Consensus 716 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------~~~~~~~t~~f~~~v~~~~~~~~~~r~ 785 (881)
+.+|. .++++.-.+..++.|-..++...+++.-..... .+ ++++..+|.+|..-...|+..+.. .
T Consensus 997 keRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAV--N 1071 (1160)
T KOG0209|consen 997 KERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAV--N 1071 (1160)
T ss_pred hcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhh--h
Confidence 87773 457777777777777666666555443222111 11 125556788888777778876543 2
Q ss_pred cccccccccCcchHHHHHHHHHHHHHHHHHH----HHhhhhhcCCCCChhhHHHH----HHHHHHHHHHHHHHHhcc
Q 043535 786 LEKKNVFKGIHKNKSFLGIIGITIVLQVVMV----EILKKFADTEGLNWIQWGSC----IGIAAISWPIGWFVKCIP 854 (881)
Q Consensus 786 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~~l~~~~~~~~----~~~~~~~~~~~~l~k~~~ 854 (881)
..+.||...+..|+.+..+++++..+.+.+. +=++..|...+++-.+-..+ .+-.+++|++..+.+++-
T Consensus 1072 Y~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f 1148 (1160)
T KOG0209|consen 1072 YQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFF 1148 (1160)
T ss_pred ccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2366788889999988777776655444433 33566788888874332222 222345566665555543
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-72 Score=651.44 Aligned_cols=456 Identities=25% Similarity=0.353 Sum_probs=389.3
Q ss_pred CCceEEEe-CCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCc
Q 043535 137 SIQVDVVR-NKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGY 211 (881)
Q Consensus 137 ~~~v~V~R-dg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~ 211 (881)
+.++++++ ||++++||.+||+|||+|.|+|||+||+||++++|++ .+||| |+ +|+.+..|+.+++||.+.+|.
T Consensus 210 p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs-~PV~k~~Gd~V~aGtiN~~G~ 287 (713)
T COG2217 210 PKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGES-LPVEKKPGDEVFAGTVNLDGS 287 (713)
T ss_pred CCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCC-CCEecCCCCEEeeeEEECCcc
Confidence 34776776 5668999999999999999999999999999999999 99999 55 888888999999999999999
Q ss_pred eeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hHH-------HHHHhhc
Q 043535 212 GRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL-----DLN-------AVVNLII 279 (881)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~-----~~~-------~~l~i~i 279 (881)
.+.+|+++|.+|.+++|.+.+++++..++|.|+..++++.++++..+++++++|++|+ ++. .++.++|
T Consensus 288 l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaC 367 (713)
T COG2217 288 LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIAC 367 (713)
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeC
Confidence 9999999999999999999999999999999999999999999999998888888663 222 3334559
Q ss_pred cccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccc
Q 043535 280 PEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTT 359 (881)
Q Consensus 280 P~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~ 359 (881)
||+|.+++|+++..++.+.+++|+++|+.+++|.++++|+++||||||||+|+|++.++..... +..+.+..+.++.
T Consensus 368 PCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~laAalE-- 444 (713)
T COG2217 368 PCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALAAALE-- 444 (713)
T ss_pred ccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999999999999765433 3344444443332
Q ss_pred cceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHH
Q 043535 360 AGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAE 439 (881)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e 439 (881)
..+.||+.+|+++++. ..+.. . .+..+.+| ..++..+. ++..+.+ |+++
T Consensus 445 --------------~~S~HPiA~AIv~~a~-~~~~~--~----~~~~~~i~------G~Gv~~~v-~g~~v~v---G~~~ 493 (713)
T COG2217 445 --------------QHSEHPLAKAIVKAAA-ERGLP--D----VEDFEEIP------GRGVEAEV-DGERVLV---GNAR 493 (713)
T ss_pred --------------hcCCChHHHHHHHHHH-hcCCC--C----ccceeeec------cCcEEEEE-CCEEEEE---cCHH
Confidence 2356899999999776 33311 0 01122222 33444433 3444544 9998
Q ss_pred HHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHH
Q 043535 440 IILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKA 519 (881)
Q Consensus 440 ~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~ 519 (881)
.+.+.-... + . ..+..+.+..+|..++.++ .|.+++|+++++|++|++++++
T Consensus 494 ~~~~~~~~~----------~----~-~~~~~~~~~~~G~t~v~va-------------~dg~~~g~i~~~D~~R~~a~~a 545 (713)
T COG2217 494 LLGEEGIDL----------P----L-LSERIEALESEGKTVVFVA-------------VDGKLVGVIALADELRPDAKEA 545 (713)
T ss_pred HHhhcCCCc----------c----c-hhhhHHHHHhcCCeEEEEE-------------ECCEEEEEEEEeCCCChhHHHH
Confidence 886532110 0 1 3455677788888877777 4669999999999999999999
Q ss_pred HHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEc
Q 043535 520 VEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTG 599 (881)
Q Consensus 520 I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iG 599 (881)
|++||+.|++++|+|||+..+|.++|+++||+. +++.+.|++|.++|+.+|++|++|+|+|
T Consensus 546 I~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------v~AellPedK~~~V~~l~~~g~~VamVG 606 (713)
T COG2217 546 IAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------VRAELLPEDKAEIVRELQAEGRKVAMVG 606 (713)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------heccCCcHHHHHHHHHHHhcCCEEEEEe
Confidence 999999999999999999999999999999987 9999999999999999999999999999
Q ss_pred CCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 600 NGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 600 Dg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
||.||+|+|..|||||||| .|+|.++++||++++++|+..++++++.+|++++++++|+.|++.+|.+.+.+..++
T Consensus 607 DGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 607 DGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 799999999999999999999999999999999999999999999999998877765
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.7e-68 Score=635.93 Aligned_cols=476 Identities=20% Similarity=0.273 Sum_probs=395.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC--
Q 043535 112 YISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES-- 187 (881)
Q Consensus 112 ~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes-- 187 (881)
++.+....+.+++++.++.++++.+ +.+++|+|||++++|++++|+|||+|.|++||+|||||++++|+. .+|||
T Consensus 215 l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~l 293 (741)
T PRK11033 215 LFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-Eeecccc
Confidence 3444555555555555555666543 358999999999999999999999999999999999999999986 99998
Q ss_pred --CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 188 --DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGL 265 (881)
Q Consensus 188 --~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~ 265 (881)
|+ .|+.+..|+.+|+||.+.+|.++++|+++|.+|.+||+.+.+++.+.+++|+|+.+++++.+++++.++++++++
T Consensus 294 TGEs-~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~ 372 (741)
T PRK11033 294 TGES-IPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVI 372 (741)
T ss_pred cCCC-CCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 666666999999999999999999999999999999999999998889999999999999999999999888888
Q ss_pred HHHh-----h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCce
Q 043535 266 LMIL-----D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQM 333 (881)
Q Consensus 266 ~~~~-----~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m 333 (881)
+++. + ..+++.+.|||+|.+++|+++..+..+++|+|+++|+.+++|+|+++|++|||||||||+|+|
T Consensus 373 ~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~ 452 (741)
T PRK11033 373 LVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKP 452 (741)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCce
Confidence 7652 1 223445569999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCC
Q 043535 334 KGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNS 413 (881)
Q Consensus 334 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s 413 (881)
++.+.......+..+.+..+.... ..+.||+++|+++++. +.+.+ +||.+
T Consensus 453 ~v~~~~~~~~~~~~~~l~~aa~~e----------------~~s~hPia~Ai~~~a~-~~~~~-------------~~~~~ 502 (741)
T PRK11033 453 QVTDIHPATGISESELLALAAAVE----------------QGSTHPLAQAIVREAQ-VRGLA-------------IPEAE 502 (741)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHH-hcCCC-------------CCCCc
Confidence 998874322111223333222111 1246899999999876 33322 35555
Q ss_pred CCceE---EEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC
Q 043535 414 HRKQS---RVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV 490 (881)
Q Consensus 414 ~~k~~---sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~ 490 (881)
+++.+ ++.... ++..+. -|+++.+.+ ++ +.+.+.++++..+|++++++|+
T Consensus 503 ~~~~~~g~Gv~~~~-~g~~~~---ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~----- 555 (741)
T PRK11033 503 SQRALAGSGIEGQV-NGERVL---ICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR----- 555 (741)
T ss_pred ceEEEeeEEEEEEE-CCEEEE---Eecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE-----
Confidence 55554 222222 343343 488887643 11 2234456778899999999994
Q ss_pred CcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh
Q 043535 491 PEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI 570 (881)
Q Consensus 491 ~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 570 (881)
|.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+.
T Consensus 556 --------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------- 608 (741)
T PRK11033 556 --------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------- 608 (741)
T ss_pred --------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------
Confidence 56899999999999999999999999999999999999999999999999996
Q ss_pred eeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHH
Q 043535 571 YVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRC 650 (881)
Q Consensus 571 ~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~ 650 (881)
.+++..|++|.++++.+++. +.|+|+|||.||+|||+.|||||+|+ ++++.++++||+++.++++..+.++++.||+
T Consensus 609 -~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~ 685 (741)
T PRK11033 609 -FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRA 685 (741)
T ss_pred -eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 46789999999999999965 58999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 651 VYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 651 ~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
++.|+++++.|.+.+|++.+.+.+++
T Consensus 686 ~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 686 THANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999887766543
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.3e-67 Score=610.90 Aligned_cols=459 Identities=36% Similarity=0.521 Sum_probs=391.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC---
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES--- 187 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes--- 187 (881)
+..+++...+++.++..+++.++..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes~LT 85 (499)
T TIGR01494 8 LFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDESNLT 85 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEccccc
Confidence 344455555555555555533333456799999999 9999999999999999999999999999999976 99998
Q ss_pred -CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHH-HHHHHHHHHHHHHHH
Q 043535 188 -DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLT-SLVDLIGLAITFSGL 265 (881)
Q Consensus 188 -~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~l~~~~~~~ 265 (881)
|+ .|+.+.+++.+++||.+.+|+..+.|+++|.+|..+++...+......++++++..+++. .++.++.++++++.+
T Consensus 86 GEs-~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~ 164 (499)
T TIGR01494 86 GES-VPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVF 164 (499)
T ss_pred CCC-CCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 666666899999999999999999999999999999999988777777899999999998 677777666666665
Q ss_pred HHHh----h---H-------HHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccC
Q 043535 266 LMIL----D---L-------NAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLN 331 (881)
Q Consensus 266 ~~~~----~---~-------~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~ 331 (881)
+++. + + ..++.++|||+|+++++++...+..+++++|+++|+++++|+||++|++|||||||||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~ 244 (499)
T TIGR01494 165 LFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKN 244 (499)
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccC
Confidence 5442 1 1 123345599999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecC
Q 043535 332 QMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAF 411 (881)
Q Consensus 332 ~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F 411 (881)
+|++.++..... .+.++||+|.|+++++. . +.+...||
T Consensus 245 ~~~v~~~~~~~~-----------------------------~~~s~hp~~~ai~~~~~-~------------~~~~~~~f 282 (499)
T TIGR01494 245 EMSFKKVSVLGG-----------------------------EYLSGHPDERALVKSAK-W------------KILNVFEF 282 (499)
T ss_pred ceEEEEEEecCC-----------------------------CcCCCChHHHHHHHHhh-h------------cCcceecc
Confidence 999987632110 12467899999999876 2 11356799
Q ss_pred CCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCC
Q 043535 412 NSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVP 491 (881)
Q Consensus 412 ~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~ 491 (881)
++.+++|+++++.+++ .++||+++.+.++|.+ +.+..++++.+|+|++++|++.
T Consensus 283 ~~~~~~~~~~~~~~~~----~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~---- 336 (499)
T TIGR01494 283 SSVRKRMSVIVRGPDG----TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE---- 336 (499)
T ss_pred CCCCceEEEEEecCCc----EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC----
Confidence 9999999999986322 3689999999998852 1233456778999999999643
Q ss_pred cccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhe
Q 043535 492 EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIY 571 (881)
Q Consensus 492 ~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 571 (881)
+++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ---------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------- 386 (499)
T TIGR01494 337 ---------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------- 386 (499)
T ss_pred ---------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------
Confidence 79999999999999999999999999999999999999999999999986
Q ss_pred eeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHH
Q 043535 572 VMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCV 651 (881)
Q Consensus 572 v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~ 651 (881)
+++++|++|.++++.+|+.|+.|+|+|||.||++|++.|||||+|+ ++++||+++.++++..+..++.+||+.
T Consensus 387 -~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~ 459 (499)
T TIGR01494 387 -FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKT 459 (499)
T ss_pred -eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999996 688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 652 YVNIQKFIQFHLTISVSSVLFNFLAA 677 (881)
Q Consensus 652 ~~~i~~~i~~~~~~n~~~i~~~~~~~ 677 (881)
++++++++.|.+++|+..+.+.+++.
T Consensus 460 ~~~i~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 460 FSTIKSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877776543
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.3e-66 Score=609.81 Aligned_cols=505 Identities=24% Similarity=0.339 Sum_probs=403.6
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCceEEEeCC-EEEEEeccccccCcEEEEcC
Q 043535 91 LFVCAILSLAFGL-NLFIAVSIYISVSASSKYMQNKKFEKLLSKVSN--SIQVDVVRNK-RRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 91 ll~~ail~~~~~~-~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~v~V~Rdg-~~~~I~~~~Lv~GDII~l~~ 166 (881)
..++++++++.+. .....++++.++....+++++++.++.++++.+ +..++|+||| ++++|++++|+|||+|.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~ 84 (556)
T TIGR01525 5 MALATIAAYAMGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRP 84 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECC
Confidence 3444455555543 333344445555566666666665555666543 3479999996 99999999999999999999
Q ss_pred CCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChH
Q 043535 167 GDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLL 242 (881)
Q Consensus 167 G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 242 (881)
||+|||||++++|+. .+||| |+ .|+.+.+++.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++++
T Consensus 85 G~~iP~Dg~vi~g~~-~vdes~lTGEs-~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~ 162 (556)
T TIGR01525 85 GERIPVDGVVISGES-EVDESALTGES-MPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPI 162 (556)
T ss_pred CCEeccceEEEecce-EEeehhccCCC-CCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcH
Confidence 999999999999986 99998 44 6666668999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh------h---HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhh
Q 043535 243 KARVRKLTSLVDLIGLAITFSGLLMIL------D---LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313 (881)
Q Consensus 243 ~~~~~~~~~~~~~i~l~~~~~~~~~~~------~---~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 313 (881)
++.+++++.++.+++++++++.+++++ . ..+++.+.|||+|++++|+++..+..+++++|+++|+++++|.
T Consensus 163 ~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~ 242 (556)
T TIGR01525 163 QRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEK 242 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHH
Confidence 999999999999999988888888774 1 2233445599999999999999999999999999999999999
Q ss_pred ccceEEEEecCccccccCceEEeecCCCCChH--HHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhccccc
Q 043535 314 MGSATVICTDKTGTLTLNQMKGAADHSNIAPK--VVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILG 391 (881)
Q Consensus 314 lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 391 (881)
+|++|++|||||||||+|+|++.+........ ..+.+..+..+. ..+.||++.|+++++. +
T Consensus 243 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e----------------~~~~hp~~~Ai~~~~~-~ 305 (556)
T TIGR01525 243 LAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE----------------QSSSHPLARAIVRYAK-K 305 (556)
T ss_pred hhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh----------------ccCCChHHHHHHHHHH-h
Confidence 99999999999999999999998864322111 222222211111 1246899999999887 4
Q ss_pred CCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCC-CeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHH
Q 043535 392 MSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKAD-NTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQII 470 (881)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~-~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 470 (881)
.+.+... . + ..+.++ .+ ++.... ++ .++ ..|+++.+. .. +. . ...+.+..
T Consensus 306 ~~~~~~~--~-~-~~~~~~----~~--gi~~~~-~g~~~~---~lg~~~~~~--~~------~~--~-----~~~~~~~~ 356 (556)
T TIGR01525 306 RGLELPK--Q-E-DVEEVP----GK--GVEATV-DGQEEV---RIGNPRLLE--LA------AE--P-----ISASPDLL 356 (556)
T ss_pred cCCCccc--c-c-CeeEec----CC--eEEEEE-CCeeEE---EEecHHHHh--hc------CC--C-----chhhHHHH
Confidence 4443221 0 0 111111 11 222222 22 223 348877651 10 00 0 11123445
Q ss_pred HHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcC
Q 043535 471 QGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAG-VNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~g 549 (881)
+++.++|+|++.++ .|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++.++++++|
T Consensus 357 ~~~~~~g~~~~~v~-------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 357 NEGESQGKTVVFVA-------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred HHHhhCCcEEEEEE-------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 67788999999888 366899999999999999999999999999 9999999999999999999999
Q ss_pred CCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhc
Q 043535 550 ILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESS 629 (881)
Q Consensus 550 i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~a 629 (881)
+.. +|++..|++|.++++.+++.++.|+|+|||.||++|++.||+|+++| ++.+.+++.|
T Consensus 424 i~~-------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~A 483 (556)
T TIGR01525 424 IDE-------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAA 483 (556)
T ss_pred CCe-------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhC
Confidence 986 89999999999999999999999999999999999999999999999 8999999999
Q ss_pred CeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 630 DIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 630 d~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
|+++.++++..+.++++.||+.+.|+++++.|.+.+|+..+.+.+++
T Consensus 484 d~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 484 DIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred CEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988766654
No 29
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-67 Score=596.65 Aligned_cols=515 Identities=23% Similarity=0.313 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHHHH---HHhhhc--CCceEEEeCCE-EEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC---
Q 043535 117 ASSKYMQNKKFEKL---LSKVSN--SIQVDVVRNKR-RQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES--- 187 (881)
Q Consensus 117 ~~~~~~~~~~~~~~---l~~~~~--~~~v~V~Rdg~-~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes--- 187 (881)
.+.+|.+.+...+. +.++.+ +..+.++-+|+ +++|+.+.|++||+|.|.||++||+||++++|++ .||||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iT 430 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLIT 430 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhcc
Confidence 34455555443332 333322 34788999986 8899999999999999999999999999999999 99998
Q ss_pred -CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 188 -DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLL 266 (881)
Q Consensus 188 -~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~ 266 (881)
|+ +|+.++.++.+.+||.+.+|...+.++++|.+|.+++|.+.+++++..++|+|+.+|+++.++++..+++++++++
T Consensus 431 GEs-~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~ 509 (951)
T KOG0207|consen 431 GES-MPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFV 509 (951)
T ss_pred CCc-eecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHH
Confidence 55 7777779999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHhh-----------HHHHH-----------HhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecC
Q 043535 267 MILD-----------LNAVV-----------NLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDK 324 (881)
Q Consensus 267 ~~~~-----------~~~~l-----------~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 324 (881)
+|.- +...+ .++|||+|.++.|++...+....+++|+++|..+.+|.+.++++++|||
T Consensus 510 ~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDK 589 (951)
T KOG0207|consen 510 VWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDK 589 (951)
T ss_pred HHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcC
Confidence 8761 11111 2339999999999999999999999999999999999999999999999
Q ss_pred ccccccCceEEeecCCCCCh-HHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcc
Q 043535 325 TGTLTLNQMKGAADHSNIAP-KVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSC 403 (881)
Q Consensus 325 TGTLT~~~m~v~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~ 403 (881)
|||||+|++.+.+.....++ ...+.+.-..+. ++ -+.||+.+|+++|++ +..... ...
T Consensus 590 TGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~---------Es-------~SeHPig~AIv~yak-~~~~~~----~~~ 648 (951)
T KOG0207|consen 590 TGTLTEGKPTVVDFKSLSNPISLKEALALVAAM---------ES-------GSEHPIGKAIVDYAK-EKLVEP----NPE 648 (951)
T ss_pred CCceecceEEEEEEEecCCcccHHHHHHHHHHH---------hc-------CCcCchHHHHHHHHH-hccccc----Ccc
Confidence 99999999999987443332 122222111111 11 246899999999998 433111 111
Q ss_pred eEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhh
Q 043535 404 VILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAF 483 (881)
Q Consensus 404 ~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~ 483 (881)
.......|..+... +-+.. +++++ +-|+-+.+...-.. ..+++++.+++....|..+..+
T Consensus 649 ~~~~~~~~pg~g~~--~~~~~-~~~~i---~iGN~~~~~r~~~~--------------~~~~i~~~~~~~e~~g~tvv~v 708 (951)
T KOG0207|consen 649 GVLSFEYFPGEGIY--VTVTV-DGNEV---LIGNKEWMSRNGCS--------------IPDDILDALTESERKGQTVVYV 708 (951)
T ss_pred ccceeecccCCCcc--cceEE-eeeEE---eechHHHHHhcCCC--------------CchhHHHhhhhHhhcCceEEEE
Confidence 11222222222211 22222 22233 34888888653221 1234667777788899999888
Q ss_pred hhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHH
Q 043535 484 AHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEK 563 (881)
Q Consensus 484 a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 563 (881)
+ .|.+++|++.++|++|+|+..+|+.||+.|++++|+||||..+|.++|+++|++.
T Consensus 709 ~-------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------- 764 (951)
T KOG0207|consen 709 A-------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------- 764 (951)
T ss_pred E-------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------
Confidence 8 4779999999999999999999999999999999999999999999999999887
Q ss_pred HHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH
Q 043535 564 MEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 564 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
|++...|+||.+.|+.+|+++..|+|+|||.||+|+|.+|||||+|+ .|++.|.++||+|++.||+.+++.
T Consensus 765 --------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 765 --------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred --------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHH
Confidence 99999999999999999999999999999999999999999999999 889999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHhcc
Q 043535 644 LLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLAAVLVG--KNPLTAVQLLWMNLIVLTLGALALVT 707 (881)
Q Consensus 644 ~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~~~~~~--~~pl~~~q~l~~~~~~~~~~~l~l~~ 707 (881)
++..+|++..|++.|+.|++.||+..+.+.....+..+ -.|..+.-.+..+.+..++.++.|-+
T Consensus 836 ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~ 901 (951)
T KOG0207|consen 836 AIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKR 901 (951)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhh
Confidence 99999999999999999999999998877665543333 12333333455566666666666643
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.3e-65 Score=597.40 Aligned_cols=488 Identities=22% Similarity=0.314 Sum_probs=394.0
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCceEEEeCCEEEEEeccccccCcEEEEcC
Q 043535 90 ILFVCAILSLAFG-LNLFIAVSIYISVSASSKYMQNKKFEKLLSKVS--NSIQVDVVRNKRRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 90 ~ll~~ail~~~~~-~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~~--~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~ 166 (881)
+++++++++++.+ +.....+++++++....+.+++++.++.++++. ++.+++|+|||+++++++++|+|||+|.+++
T Consensus 4 l~~~a~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~ 83 (536)
T TIGR01512 4 LMALAALGAVAIGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKP 83 (536)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcC
Confidence 3445555555554 322233334444555555556666655576665 3468999999999999999999999999999
Q ss_pred CCeeccceeEEeccceeeecC----CccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChH
Q 043535 167 GDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLL 242 (881)
Q Consensus 167 G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 242 (881)
||+|||||++++|+. .|||| |+ .|..+..++.+|+||.+.+|+++++|++||.+|++|++.+.+.+.+.+++++
T Consensus 84 G~~iP~Dg~ii~g~~-~vdes~lTGEs-~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~ 161 (536)
T TIGR01512 84 GERVPVDGVVLSGTS-TVDESALTGES-VPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKT 161 (536)
T ss_pred CCEeecceEEEeCcE-EEEecccCCCC-CcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChH
Confidence 999999999999987 99998 44 6666668999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---h-------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhh
Q 043535 243 KARVRKLTSLVDLIGLAITFSGLLMIL---D-------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACE 312 (881)
Q Consensus 243 ~~~~~~~~~~~~~i~l~~~~~~~~~~~---~-------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 312 (881)
++.+++++.++.++.++++++.+++++ . ..+++.++|||+|++++|+++..+..+++++|+++|+++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le 241 (536)
T TIGR01512 162 QRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALE 241 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHH
Confidence 999999999999999888887777654 1 223334459999999999999999999999999999999999
Q ss_pred hccceEEEEecCccccccCceEEeecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccC
Q 043535 313 TMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGM 392 (881)
Q Consensus 313 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~ 392 (881)
++|++|++|||||||||+|+|++.+... .+.+..+.++. ..+.||.+.|+++++. +.
T Consensus 242 ~l~~v~~i~fDKTGTLT~~~~~v~~~~~------~~~l~~a~~~e----------------~~~~hp~~~Ai~~~~~-~~ 298 (536)
T TIGR01512 242 ALAKIKTVAFDKTGTLTTGRPKVVDVVP------AEVLRLAAAAE----------------QASSHPLARAIVDYAR-KR 298 (536)
T ss_pred hhcCCCEEEECCCCCCcCCceEEEEeeH------HHHHHHHHHHh----------------ccCCCcHHHHHHHHHH-hc
Confidence 9999999999999999999999988643 12332222111 1246899999999876 32
Q ss_pred CCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHH
Q 043535 393 SMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQG 472 (881)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 472 (881)
+ .....+..| ..++.... ++.++. .|+++.+.+... ..
T Consensus 299 ~--------~~~~~~~~~------g~gi~~~~-~g~~~~---ig~~~~~~~~~~------------------------~~ 336 (536)
T TIGR01512 299 E--------NVESVEEVP------GEGVRAVV-DGGEVR---IGNPRSLEAAVG------------------------AR 336 (536)
T ss_pred C--------CCcceEEec------CCeEEEEE-CCeEEE---EcCHHHHhhcCC------------------------cc
Confidence 2 111112221 11222222 333333 488876533110 03
Q ss_pred HHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCC
Q 043535 473 MAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 473 ~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
+..+|.+++.++ .|..++|.+.++|++||+++++|++|+++|+ +++|+|||+..++..+++++|+.
T Consensus 337 ~~~~~~~~~~v~-------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~ 403 (536)
T TIGR01512 337 PESAGKTIVHVA-------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID 403 (536)
T ss_pred hhhCCCeEEEEE-------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh
Confidence 445566655544 5789999999999999999999999999999 99999999999999999999998
Q ss_pred chhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe
Q 043535 552 KPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI 631 (881)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~ 631 (881)
. +|++..|++|.++++.+++.++.|+|+|||.||++|++.||+||++|.++++.++..||+
T Consensus 404 ~-------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 404 E-------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred h-------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 6 789999999999999999999999999999999999999999999986688999999999
Q ss_pred eeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 632 IILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVLFNFLA 676 (881)
Q Consensus 632 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~~~~~~ 676 (881)
++.++++..+.+++..||++++++++++.|.+.+|++.+.+.+++
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999888776654
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=8.8e-65 Score=592.27 Aligned_cols=471 Identities=25% Similarity=0.329 Sum_probs=383.7
Q ss_pred HHHHHHHHHHHHHHHhhhc--CCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----Ccc
Q 043535 118 SSKYMQNKKFEKLLSKVSN--SIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHN 190 (881)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~--~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~ 190 (881)
+.+.+.+++.++.++++.+ +.+++|+|+ |++++|++++|+|||+|.|++||+|||||++++|++ .+||| |+
T Consensus 69 ~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs- 146 (562)
T TIGR01511 69 WLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGES- 146 (562)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCC-
Confidence 3333333344443555543 347888885 677999999999999999999999999999999997 99998 55
Q ss_pred ccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 043535 191 VEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL- 269 (881)
Q Consensus 191 v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~- 269 (881)
.|+.+..++.+|+||.+.+|+++++|+++|.+|.+|++.+.+.+.+.+++++++.+++++.+++++.++++++.+++|.
T Consensus 147 ~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~ 226 (562)
T TIGR01511 147 LPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLF 226 (562)
T ss_pred CcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777779999999999999999999999999999999999999888899999999999999999998888888777654
Q ss_pred ---hHHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHH
Q 043535 270 ---DLNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKV 346 (881)
Q Consensus 270 ---~~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~ 346 (881)
...+++.+.|||+|++++|+++..++.+++++|+++|+++++|.|+++|++|||||||||+|+|++.+.......+.
T Consensus 227 ~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~ 306 (562)
T TIGR01511 227 ALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDR 306 (562)
T ss_pred HHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCH
Confidence 23345566699999999999999999999999999999999999999999999999999999999988643222112
Q ss_pred HHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCC
Q 043535 347 VELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKA 426 (881)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~ 426 (881)
.+.+..+.+++ ..+.||.++|+++++. +.+.+... ....+..| ..++.... +
T Consensus 307 ~~~l~~aa~~e----------------~~s~HPia~Ai~~~~~-~~~~~~~~----~~~~~~~~------g~Gi~~~~-~ 358 (562)
T TIGR01511 307 TELLALAAALE----------------AGSEHPLAKAIVSYAK-EKGITLVE----VSDFKAIP------GIGVEGTV-E 358 (562)
T ss_pred HHHHHHHHHHh----------------ccCCChHHHHHHHHHH-hcCCCcCC----CCCeEEEC------CceEEEEE-C
Confidence 23333222221 1245899999999876 44433211 11111111 22333333 2
Q ss_pred CCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeec
Q 043535 427 DNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLL 506 (881)
Q Consensus 427 ~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i 506 (881)
+.++ ..|+++.+.+... .++ ++.++|.+++.++ .|.+++|.+
T Consensus 359 g~~~---~iG~~~~~~~~~~----------~~~------------~~~~~g~~~~~~~-------------~~~~~~g~~ 400 (562)
T TIGR01511 359 GTKI---QLGNEKLLGENAI----------KID------------GKAEQGSTSVLVA-------------VNGELAGVF 400 (562)
T ss_pred CEEE---EEECHHHHHhCCC----------CCC------------hhhhCCCEEEEEE-------------ECCEEEEEE
Confidence 3333 4599988754211 011 1235677777665 577999999
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
.++|++||+++++|++|++.|++++|+|||+..++.++++++|+. ++++..|++|.+.++
T Consensus 401 ~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--------------------~~~~~~p~~K~~~v~ 460 (562)
T TIGR01511 401 ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--------------------VRAEVLPDDKAALIK 460 (562)
T ss_pred EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--------------------EEccCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999995 678899999999999
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTIS 666 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 666 (881)
.+++.++.|+|+|||.||++|++.||+||+|+ ++++.+++.||+++.++++..+.++++.||++++++++++.|++.+|
T Consensus 461 ~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n 539 (562)
T TIGR01511 461 ELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYN 539 (562)
T ss_pred HHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 043535 667 VSSVLFNFLAA 677 (881)
Q Consensus 667 ~~~i~~~~~~~ 677 (881)
++.+.+.+.+.
T Consensus 540 ~~~i~la~~~~ 550 (562)
T TIGR01511 540 VIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHhhh
Confidence 99877666543
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1e-63 Score=610.90 Aligned_cols=461 Identities=26% Similarity=0.327 Sum_probs=383.7
Q ss_pred HHhhhc--CCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----CccccccCCCCceeecc
Q 043535 131 LSKVSN--SIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DHNVEVNSSQNPFLLSG 204 (881)
Q Consensus 131 l~~~~~--~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~~v~~~~~~~~~l~aG 204 (881)
++++.+ +.+++|+|||++++|+.++|+|||+|.|++||+|||||++++|+. .+||| |+ .|+.+..++.+|+|
T Consensus 314 ~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs-~pv~k~~gd~V~aG 391 (834)
T PRK10671 314 LEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEP-IPQQKGEGDSVHAG 391 (834)
T ss_pred HHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCC-CCEecCCCCEEEec
Confidence 555443 357899999999999999999999999999999999999999976 99998 54 67777799999999
Q ss_pred cEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h----------H
Q 043535 205 TKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLLMIL---D----------L 271 (881)
Q Consensus 205 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~~~---~----------~ 271 (881)
|.+.+|.+.++|+++|.+|.+|++.+.+++.+..++++++.+++++.+++++.++++++.+++|+ . .
T Consensus 392 t~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a 471 (834)
T PRK10671 392 TVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIA 471 (834)
T ss_pred ceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 99999999999999999999999999999888889999999999999999988888877766553 1 1
Q ss_pred HHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEeecCCCCChHHHHHHH
Q 043535 272 NAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGAADHSNIAPKVVELIQ 351 (881)
Q Consensus 272 ~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~ 351 (881)
..++.++|||+|++++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|++.+.......+..+.+.
T Consensus 472 ~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~ 551 (834)
T PRK10671 472 TTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALR 551 (834)
T ss_pred HHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHHHH
Confidence 23334559999999999999999999999999999999999999999999999999999999998764321111223333
Q ss_pred HHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEE
Q 043535 352 QGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVH 431 (881)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~ 431 (881)
.+.+++. .+.||+++|+++++. ..... ...+|+... ..++.... ++.
T Consensus 552 ~a~~~e~----------------~s~hp~a~Ai~~~~~-~~~~~-----------~~~~~~~~~-g~Gv~~~~-~g~--- 598 (834)
T PRK10671 552 LAAALEQ----------------GSSHPLARAILDKAG-DMTLP-----------QVNGFRTLR-GLGVSGEA-EGH--- 598 (834)
T ss_pred HHHHHhC----------------CCCCHHHHHHHHHHh-hCCCC-----------CcccceEec-ceEEEEEE-CCE---
Confidence 3333221 145899999998764 22110 011222222 12332222 332
Q ss_pred EEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCC
Q 043535 432 VHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDP 511 (881)
Q Consensus 432 l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~ 511 (881)
.+.+|+++.+.+... + ++.+.+..+++.++|.+++.+++ |..++|++.+.|+
T Consensus 599 ~~~~G~~~~~~~~~~------------~---~~~~~~~~~~~~~~g~~~v~va~-------------~~~~~g~~~l~d~ 650 (834)
T PRK10671 599 ALLLGNQALLNEQQV------------D---TKALEAEITAQASQGATPVLLAV-------------DGKAAALLAIRDP 650 (834)
T ss_pred EEEEeCHHHHHHcCC------------C---hHHHHHHHHHHHhCCCeEEEEEE-------------CCEEEEEEEccCc
Confidence 235699998754211 1 13355566778889999998884 5579999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
+||+++++|++|++.|++++|+|||+..++..+++++|+.. ++++..|++|.++++.++.+
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-------------------~~~~~~p~~K~~~i~~l~~~ 711 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-------------------VIAGVLPDGKAEAIKRLQSQ 711 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------------EEeCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999986 89999999999999999999
Q ss_pred CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 592 GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLTISVSSVL 671 (881)
Q Consensus 592 g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~i~ 671 (881)
++.|+|+|||.||++|++.||+||+|| ++++.++++||+++.++++.++.+++++||+.+.++++|+.|++.+|++.+.
T Consensus 712 ~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 712 GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999999999998877
Q ss_pred HHH
Q 043535 672 FNF 674 (881)
Q Consensus 672 ~~~ 674 (881)
+.+
T Consensus 791 ~a~ 793 (834)
T PRK10671 791 IAA 793 (834)
T ss_pred HHH
Confidence 665
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-54 Score=456.28 Aligned_cols=470 Identities=23% Similarity=0.322 Sum_probs=367.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceEEEeC-CEEEEEeccccccCcEEEEcCCCeeccceeEEeccceeeecC----Cc
Q 043535 115 VSASSKYMQNKKFEKLLSKVSNSIQVDVVRN-KRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQIQES----DH 189 (881)
Q Consensus 115 i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd-g~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~vdes----~~ 189 (881)
.+++.|-+-+.++.. +++.+....++++++ |.++.+++.+|+.||+|.|++||.||+||.+++|.+ .|||| |+
T Consensus 82 aEa~AEGrgKAqAds-Lr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGES 159 (681)
T COG2216 82 AEAVAEGRGKAQADS-LRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGES 159 (681)
T ss_pred HHHHHcccchHHHHH-HHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCC
Confidence 334444444444444 665555567777876 899999999999999999999999999999999998 99998 22
Q ss_pred cccccCCCC---ceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043535 190 NVEVNSSQN---PFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIGLAITFSGLL 266 (881)
Q Consensus 190 ~v~~~~~~~---~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~ 266 (881)
-|+-++.| +-+-.||.+++.+.+.++++...+|.+.|+...++.++.++||-+-.+..+..-+.++.++.....+-
T Consensus 160 -aPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p 238 (681)
T COG2216 160 -APVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYP 238 (681)
T ss_pred -cceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33332233 56899999999999999999999999999999999999999998877776665554443332222211
Q ss_pred --HHh-----h---HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhhccceEEEEecCccccccCceEEe
Q 043535 267 --MIL-----D---LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACETMGSATVICTDKTGTLTLNQMKGA 336 (881)
Q Consensus 267 --~~~-----~---~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~ 336 (881)
.+. + ...++...+|-.+.-.++.--..++.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.
T Consensus 239 ~a~y~~g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~ 318 (681)
T COG2216 239 FAIYSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS 318 (681)
T ss_pred HHHHcCCCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhh
Confidence 111 1 123334448988887777777779999999999999999999999999999999999999987666
Q ss_pred ecCCCCChHHHHHHHHHhhhccccceeeccCCCCcceeecCChHHHHHHhcccccCCCChhhhhhcceEEEEecCCCCCc
Q 043535 337 ADHSNIAPKVVELIQQGFALNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGMSMDMEQIRQSCVILQVEAFNSHRK 416 (881)
Q Consensus 337 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k 416 (881)
+..+...-+..+... +..+++ +. ++ -|.-+.+++.++ +.+.+....... ......||+.+.|
T Consensus 319 ~f~p~~gv~~~~la~-aa~lsS---l~---De---------TpEGrSIV~LA~-~~~~~~~~~~~~-~~~~fvpFtA~TR 380 (681)
T COG2216 319 EFIPVPGVSEEELAD-AAQLAS---LA---DE---------TPEGRSIVELAK-KLGIELREDDLQ-SHAEFVPFTAQTR 380 (681)
T ss_pred heecCCCCCHHHHHH-HHHHhh---hc---cC---------CCCcccHHHHHH-HhccCCCccccc-ccceeeecceecc
Confidence 654433323333332 222322 11 11 144566777776 555443322211 1356789999888
Q ss_pred eEEEEEeeCCCCeEEEEEeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCccccc
Q 043535 417 QSRVMMRKKADNTVHVHWKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELN 496 (881)
Q Consensus 417 ~~sviv~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~ 496 (881)
++++-... + +-.-|||.+.+.+..++. +. +.++.++..+++-+..|-..++++
T Consensus 381 mSGvd~~~--~---~~irKGA~dai~~~v~~~----~g------~~p~~l~~~~~~vs~~GGTPL~V~------------ 433 (681)
T COG2216 381 MSGVDLPG--G---REIRKGAVDAIRRYVRER----GG------HIPEDLDAAVDEVSRLGGTPLVVV------------ 433 (681)
T ss_pred cccccCCC--C---ceeecccHHHHHHHHHhc----CC------CCCHHHHHHHHHHHhcCCCceEEE------------
Confidence 77775432 2 344799999999876531 11 235677888899999999888887
Q ss_pred ccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc
Q 043535 497 EENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA 576 (881)
Q Consensus 497 e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~ 576 (881)
.|-.++|++.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|++. ..+++
T Consensus 434 -~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-------------------fiAea 493 (681)
T COG2216 434 -ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------FIAEA 493 (681)
T ss_pred -ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------hhhcC
Confidence 5778999999999999999999999999999999999999999999999999997 78999
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHhHHHHH
Q 043535 577 SPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWGRCVYV 653 (881)
Q Consensus 577 ~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 653 (881)
+||+|.++++.-|..|+-|+|+|||.||+|+|.+||||+||. +|++.||+++++|=+|.|...+.+.++.|+...-
T Consensus 494 tPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 494 TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred ChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999997653
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.96 E-value=5.5e-28 Score=253.10 Aligned_cols=201 Identities=32% Similarity=0.495 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--CCc-eEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEe-ccceeeec
Q 043535 111 IYISVSASSKYMQNKKFEKLLSKVSN--SIQ-VDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLD-GHSLQIQE 186 (881)
Q Consensus 111 ~~~~i~~~~~~~~~~~~~~~l~~~~~--~~~-v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~-g~~l~vde 186 (881)
++++++.+.+++++++.++..+++.+ ..+ ++|+|||++++++++||+|||+|.+++||++||||++++ |+. .+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~vd~ 82 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YVDE 82 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EEEC
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cccc
Confidence 33444555555565555554555433 234 899999999999999999999999999999999999999 655 9998
Q ss_pred C----CccccccCC-----CCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCCccChHHHHHHHHHHHHHHHH
Q 043535 187 S----DHNVEVNSS-----QNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTSEWTLLKARVRKLTSLVDLIG 257 (881)
Q Consensus 187 s----~~~v~~~~~-----~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~i~ 257 (881)
+ ++ .++.+. .++.+|+||.+.+|++.++|++||.+|..|++.+...+++.+++++++.++++..++.++.
T Consensus 83 s~ltGes-~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 83 SALTGES-EPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp HHHHSBS-SEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 7 33 555555 8999999999999999999999999999999999998888888999999999999999888
Q ss_pred HHHHHHHHHHHhh-------------HHHHHHhhccccchHHHHHHHHHHHHHHhhccccccCchhhhh
Q 043535 258 LAITFSGLLMILD-------------LNAVVNLIIPEGLPLAVTVTIAYSMKRLMIDHAMVRKLSACET 313 (881)
Q Consensus 258 l~~~~~~~~~~~~-------------~~~~l~i~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 313 (881)
++++++++++++- ...++..+||++||+++++++..+++++.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 162 LAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 8888777765431 2233355599999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=3.3e-22 Score=207.02 Aligned_cols=97 Identities=48% Similarity=0.796 Sum_probs=91.8
Q ss_pred CceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA-- 576 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~-- 576 (881)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||.. ..++++.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----------------~~v~a~~~~ 177 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----------------SIVFARVIG 177 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----------------EEEEESHET
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----------------ccccccccc
Confidence 789999999999999999999999999999999999999999999999999954 3489999
Q ss_pred CHHHH--HHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 043535 577 SPDDK--LAMVKCLKLKGHVVAVTGNGIKDAPALEEAN 612 (881)
Q Consensus 577 ~p~~K--~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~ 612 (881)
+|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99999 9999999977779999999999999999997
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.87 E-value=1.9e-21 Score=195.80 Aligned_cols=171 Identities=37% Similarity=0.587 Sum_probs=142.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCCCccccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc
Q 043535 682 KNPLTAVQLLWMNLIVLTLGALALVTEQPTKELMEKPPVRLTEPLITNVMWRNLLAQAFYQIAVLLTLLFKGESVLGVNE 761 (881)
Q Consensus 682 ~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (881)
|.|+++.|+||+|+++|.+|+++++.|+|++++|++||+++++++++++++..++.+|+++++..+..++.....+|.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988888776665566654
Q ss_pred c-------cchhHHHHHHHHHHHHhhHhhhcccccccc--ccCcchHHHHHHHHHHHHHHHHHH--HHhhhhhcCCCCCh
Q 043535 762 N-------VKDTMIFNTFVLCQVFNEFNARKLEKKNVF--KGIHKNKSFLGIIGITIVLQVVMV--EILKKFADTEGLNW 830 (881)
Q Consensus 762 ~-------~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~--~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~ 830 (881)
. .++|++|.+++++|+++.+++|+.+ .+.+ +++++|++++.+++++++++++++ |+++++|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 3899999999999999999999854 3444 488899999999999888887775 45899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc
Q 043535 831 IQWGSCIGIAAISWPIGWFVKCI 853 (881)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~l~k~~ 853 (881)
.+|+.+++.+++.+++.|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.87 E-value=7e-19 Score=192.04 Aligned_cols=267 Identities=14% Similarity=0.249 Sum_probs=204.9
Q ss_pred CCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC----------------Cc-------
Q 043535 436 GAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV----------------PE------- 492 (881)
Q Consensus 436 Ga~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~----------------~~------- 492 (881)
|-.+...+.|+.+|+ +.+..|++...+....+.+......|+ +++||||+... .+
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 556778889999987 567789999999999888888888885 89999996532 00
Q ss_pred -------------c-------------------cccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHH
Q 043535 493 -------------E-------------------ELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT 540 (881)
Q Consensus 493 -------------~-------------------~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~ 540 (881)
+ +..-++.+|.|++....+.+++....|+.|-++.|+.+..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCch--------------------------------------------hhhcCCHHH--------------
Q 043535 541 AKAIATQCGILKP--------------------------------------------EFRNYTEEE-------------- 562 (881)
Q Consensus 541 a~~ia~~~gi~~~--------------------------------------------~~~~~~~~~-------------- 562 (881)
.+-.|+++|+... +...+..++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999764 000000000
Q ss_pred ------------HHH-------HHh-------hheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCHH--HHHhCCcc
Q 043535 563 ------------KME-------KVE-------KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAP--ALEEANVG 614 (881)
Q Consensus 563 ------------~~~-------~~~-------~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~--~l~~A~vg 614 (881)
+.. .+. -+..|.+++|+.-.++++.+|++|++++.+|...|--. .+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 000 000 11279999999999999999999999999999988433 45789999
Q ss_pred EeeCCCCcHH------------------------------HHhhcCeeeccCCchHHHHHHHHhHHHHHHHHHHHHHHHH
Q 043535 615 LSMGIQGTAV------------------------------AKESSDIIILDDNFATAVTLLNWGRCVYVNIQKFIQFHLT 664 (881)
Q Consensus 615 Iam~~~~~~~------------------------------a~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (881)
||+..-.... ..-++|+.......-.+..+|+-+|.....+|+.+.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 9886321110 1123445444445566778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHH
Q 043535 665 ISVSSVLFNFLAAVLVGKNPLTAVQLLWMNLIVLTLGALA 704 (881)
Q Consensus 665 ~n~~~i~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~ 704 (881)
..+...+.+++..++..|..++..+++|.+.+-..+..+.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~ 1135 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHH
Confidence 9999999999999999998899999999998865444444
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.55 E-value=3e-14 Score=126.24 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=108.4
Q ss_pred ceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 500 LILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 500 l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
....+.++---++-++++++|++|++. +++++.|||...+....|+-.|++.. .+++...|+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-----------------rv~a~a~~e 80 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-----------------RVFAGADPE 80 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-----------------eeecccCHH
Confidence 356778888889999999999999999 99999999999999999999999862 389999999
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCC--CCcHHHHhhcCeeeccCCchHHHHH
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGI--QGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
.|.++++.|++.++.|.|+|||.||.+||++||+||+.-+ +..+.+..+||+++.+ ...++++
T Consensus 81 ~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 81 MKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred HHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 9999999999999999999999999999999999988643 3445667899999874 4444443
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.41 E-value=5.4e-13 Score=116.87 Aligned_cols=87 Identities=30% Similarity=0.451 Sum_probs=69.6
Q ss_pred hccccceeeccCCCCcceeecCChHHHHHHhcccccC--CCChhhhhhcceEEEEecCCCCCceEEEEEeeCCCCeEEEE
Q 043535 356 LNTTAGFYKRTSGSGLEIELSGSSIEKAILSWPILGM--SMDMEQIRQSCVILQVEAFNSHRKQSRVMMRKKADNTVHVH 433 (881)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~--~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~l~ 433 (881)
+|+.+.+...+... .....|+|+|.||+.++. .. +.+....+..+++++.+||+|+||+|+++++ +++.+.+|
T Consensus 2 LCn~a~~~~~~~~~--~~~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~ 76 (91)
T PF13246_consen 2 LCNDAEIEYDDESK--TEEIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILY 76 (91)
T ss_pred CccccEeecCCCCc--cccccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEE
Confidence 56666654322211 223899999999999998 77 5567788999999999999999999999998 33357789
Q ss_pred EeCCHHHHHHhccc
Q 043535 434 WKGAAEIILAMCSS 447 (881)
Q Consensus 434 ~KGa~e~i~~~c~~ 447 (881)
+|||||.|+++|++
T Consensus 77 ~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 77 VKGAPEVILDRCTH 90 (91)
T ss_pred cCCChHHHHHhcCC
Confidence 99999999999985
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.30 E-value=4.3e-12 Score=105.22 Aligned_cols=68 Identities=25% Similarity=0.429 Sum_probs=64.4
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHH
Q 043535 29 QFGGTGAVATALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILS 98 (881)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~ 98 (881)
+..+++++++.|+||..+|||++| +.+|+++||+|+++.++.+++|+.++++|.+|+++++++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 456899999999999999999988 99999999999999999999999999999999999999999886
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.30 E-value=1.6e-11 Score=128.54 Aligned_cols=137 Identities=20% Similarity=0.205 Sum_probs=103.1
Q ss_pred cCC-CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hh--h------cC-----------
Q 043535 509 KDP-CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EF--R------NY----------- 558 (881)
Q Consensus 509 ~D~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~--~------~~----------- 558 (881)
.|. +.+.+.++|++++++|++++++|||+...+..+++.+|+..+ .. . .+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 788999999999999999999999999999999999998753 00 0 00
Q ss_pred ----------------------------CHHHHHHHHhhh----ee-----eeccCHH--HHHHHHHHHhhc----CCEE
Q 043535 559 ----------------------------TEEEKMEKVEKI----YV-----MARASPD--DKLAMVKCLKLK----GHVV 595 (881)
Q Consensus 559 ----------------------------~~~~~~~~~~~~----~v-----~~~~~p~--~K~~~v~~l~~~----g~~v 595 (881)
..++..+.+.+. .+ +....|. .|...++.+.++ ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 001111111111 00 1122232 477778777665 3468
Q ss_pred EEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 596 AVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 596 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+++||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++++
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999 999999999999999999999998875
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.30 E-value=1.2e-11 Score=132.83 Aligned_cols=67 Identities=22% Similarity=0.229 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ .+.|+++|||.||.+||+.|++|+||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 466777776654 246899999999999999999999999 9999999999999999999999988753
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.29 E-value=1.3e-11 Score=132.63 Aligned_cols=135 Identities=12% Similarity=0.116 Sum_probs=100.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------h-h---
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------------E-F--- 555 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------------~-~--- 555 (881)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ + .
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5899999999999999999999999999999999999998643 0 0
Q ss_pred --------------hcCCH-----------------------------------HH---HHHHHhh-----hee------
Q 043535 556 --------------RNYTE-----------------------------------EE---KMEKVEK-----IYV------ 572 (881)
Q Consensus 556 --------------~~~~~-----------------------------------~~---~~~~~~~-----~~v------ 572 (881)
....+ +. +.+.+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00000 00 0000100 000
Q ss_pred eeccCHH--HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe--eeccCCchHHHHH
Q 043535 573 MARASPD--DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI--IILDDNFATAVTL 644 (881)
Q Consensus 573 ~~~~~p~--~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~--vl~~~~~~~i~~~ 644 (881)
+...+|. .|+..++.+.++ | ..|+++|||.||.+||+.|+.||||+ |+.+.+|+.||+ ++.+++.+++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 1122232 477778777665 2 46899999999999999999999999 999999999997 7778899999987
Q ss_pred HH
Q 043535 645 LN 646 (881)
Q Consensus 645 i~ 646 (881)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
No 44
>PRK10976 putative hydrolase; Provisional
Probab=99.29 E-value=1.8e-11 Score=131.16 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------h-hh--
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------------------------E-FR-- 556 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------------------------~-~~-- 556 (881)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..+ + ..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4889999999999999999999999999999999999998643 0 00
Q ss_pred ----------------cCCH------------------------------------HHHH---HHHhh-----hee----
Q 043535 557 ----------------NYTE------------------------------------EEKM---EKVEK-----IYV---- 572 (881)
Q Consensus 557 ----------------~~~~------------------------------------~~~~---~~~~~-----~~v---- 572 (881)
...+ ++.. +.+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 0000 0000 00000 000
Q ss_pred --eeccCH--HHHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC--eeeccCCchHHH
Q 043535 573 --MARASP--DDKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD--IIILDDNFATAV 642 (881)
Q Consensus 573 --~~~~~p--~~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad--~vl~~~~~~~i~ 642 (881)
+....| ..|+..++.+.++ | +.|+++|||.||.+||+.|+.|+||+ |+.+.+|+.|| +|+.+++.+++.
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHH
Confidence 111122 2467777776654 2 46899999999999999999999999 99999999988 788899999999
Q ss_pred HHHH
Q 043535 643 TLLN 646 (881)
Q Consensus 643 ~~i~ 646 (881)
++|+
T Consensus 258 ~~l~ 261 (266)
T PRK10976 258 HYLR 261 (266)
T ss_pred HHHH
Confidence 8875
No 45
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.28 E-value=2e-11 Score=130.67 Aligned_cols=143 Identities=23% Similarity=0.268 Sum_probs=108.7
Q ss_pred eeccccCC-CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------------------------
Q 043535 504 GLLGIKDP-CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------------------------- 553 (881)
Q Consensus 504 G~i~~~D~-~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------------------- 553 (881)
|.+.-.|. +.+.+.++|+++++.|++++++|||+...+..+.+++|+..+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999864
Q ss_pred -----h-------------------hh------------------------------cCCHH---HHHHHHhh-----he
Q 043535 554 -----E-------------------FR------------------------------NYTEE---EKMEKVEK-----IY 571 (881)
Q Consensus 554 -----~-------------------~~------------------------------~~~~~---~~~~~~~~-----~~ 571 (881)
+ .. ....+ +..+.+.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 00 00001 11111111 11
Q ss_pred ee-------eccCH--HHHHHHHHHHhhc-CC---EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCc
Q 043535 572 VM-------ARASP--DDKLAMVKCLKLK-GH---VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNF 638 (881)
Q Consensus 572 v~-------~~~~p--~~K~~~v~~l~~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~ 638 (881)
.+ ....| .+|+..++.+.++ |- .|+++||+.||.+||+.|+.||||+ |+.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 11 22233 3688888888874 43 5999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHH
Q 043535 639 ATAVTLLNW 647 (881)
Q Consensus 639 ~~i~~~i~~ 647 (881)
+++.+++++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999998875
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.26 E-value=2.3e-11 Score=125.93 Aligned_cols=133 Identities=19% Similarity=0.203 Sum_probs=100.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--------------h--hhcCC---------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--------------E--FRNYT--------------- 559 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--------------~--~~~~~--------------- 559 (881)
++.+.+.++|++|+++|++++++|||+...+..+++.+++..+ . .....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998744 0 00000
Q ss_pred --------------------HHHHHHHHhhh--ee-----eeccC--HHHHHHHHHHHhhc----CCEEEEEcCCccCHH
Q 043535 560 --------------------EEEKMEKVEKI--YV-----MARAS--PDDKLAMVKCLKLK----GHVVAVTGNGIKDAP 606 (881)
Q Consensus 560 --------------------~~~~~~~~~~~--~v-----~~~~~--p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~ 606 (881)
.+.+.+.+.+. .+ +..++ ...|+..++.+.++ ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00111111111 01 11222 24788888888765 235899999999999
Q ss_pred HHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHH
Q 043535 607 ALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 607 ~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999998888888765
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.22 E-value=6.8e-11 Score=123.33 Aligned_cols=135 Identities=21% Similarity=0.247 Sum_probs=100.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------------h------hhcCCH------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------E------FRNYTE------------ 560 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~------~~~~~~------------ 560 (881)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+ . ...+.+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4788999999999999999999999999999999999996543 0 000000
Q ss_pred ------------------------HHHHHHHhhhe----e-----eeccCH--HHHHHHHHHHhhc----CCEEEEEcCC
Q 043535 561 ------------------------EEKMEKVEKIY----V-----MARASP--DDKLAMVKCLKLK----GHVVAVTGNG 601 (881)
Q Consensus 561 ------------------------~~~~~~~~~~~----v-----~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg 601 (881)
+.......+.. + +....| ..|...++.+.++ .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 01111111110 0 112222 3688888887765 3568999999
Q ss_pred ccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH----HHHHHH
Q 043535 602 IKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT----AVTLLN 646 (881)
Q Consensus 602 ~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 646 (881)
.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++..+ +.+.++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999999888888 776654
No 48
>PLN02887 hydrolase family protein
Probab=99.18 E-value=9.9e-11 Score=135.75 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
.|+..++.+.++ | +.|+++|||.||.+||+.|++||||+ |+.+.+|+.||+|+.+++.+++.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 355556666554 2 36899999999999999999999999 9999999999999999999999988863
No 49
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.18 E-value=9.5e-11 Score=124.11 Aligned_cols=136 Identities=21% Similarity=0.243 Sum_probs=102.8
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-----------------------------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------------------------------- 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------------------------------- 553 (881)
...+.+.+.+++++++++|++++++|||++..+..+.+++++..+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345789999999999999999999999999999999999998743
Q ss_pred ---------------hhhc------------------------------------CCHHH-------HHHHHhhhee---
Q 043535 554 ---------------EFRN------------------------------------YTEEE-------KMEKVEKIYV--- 572 (881)
Q Consensus 554 ---------------~~~~------------------------------------~~~~~-------~~~~~~~~~v--- 572 (881)
.... ...+. +.+.......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000 00111 1111111111
Q ss_pred ----eeccCH--HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHH
Q 043535 573 ----MARASP--DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 573 ----~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+..++| ..|+..++.+.++ .+.++++||+.||.+||+.||.|+||+ |+.+.+++.||+++...+..++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 122233 4699998888864 357899999999999999999999999 99999999999999988889988
Q ss_pred HHH
Q 043535 643 TLL 645 (881)
Q Consensus 643 ~~i 645 (881)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.16 E-value=2.3e-10 Score=123.11 Aligned_cols=66 Identities=23% Similarity=0.353 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
.|...++.+.++ | +.++++||+.||.+|++.|++|+||+ |+.+.+|..||+++.+++.+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655544 2 46899999999999999999999999 899999999999999999999998875
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.11 E-value=3.2e-10 Score=123.14 Aligned_cols=131 Identities=18% Similarity=0.258 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-ccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-RASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... +.+.-+ .....+. ..+.. -+..+.|.+.++.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~-~an~le-i~dg~lt-g~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA-VANELE-IMDGKLT-GNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE-EEeEEE-EECCEEE-eEecCccCCcccHHHHHHHHH
Confidence 5799999999999999999999999998889999999998641 000000 0000000 00000 123467888888887
Q ss_pred hc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 590 LK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 590 ~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++ .+.++++|||.||.+|++.||+|||| |+.+.+++.||+++..+++++++.++.
T Consensus 258 ~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 258 QEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 65 35799999999999999999999999 789999999999999999999986654
No 52
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.10 E-value=1.6e-10 Score=94.44 Aligned_cols=62 Identities=31% Similarity=0.470 Sum_probs=57.8
Q ss_pred HhCCCCCCCCChhHHHHHHHhcccCCCccCCCCCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 043535 39 ALQTDIHGGIDGSEEDRARRQGLFGSNTYKKPPTESFFSFVVDTFKSFTVLILFVCAILSLAFG 102 (881)
Q Consensus 39 ~l~~~~~~GLs~~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~ll~~ail~~~~~ 102 (881)
.|++|++.|||++| +++|+++||+|+++.++.+++|..++++|.+|+.++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57889889999988 999999999999999988999999999999999999999999998764
No 53
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.09 E-value=6.4e-10 Score=113.14 Aligned_cols=130 Identities=12% Similarity=0.043 Sum_probs=99.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.|+.+++.| +++++||.....+..+++++|+... +.+ +.-+. ...+... . ...++.|...++.++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~-~g~~tG~-~--~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD-SDRVVGY-Q--LRQKDPKRQSVIAFK 141 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec-CCeeECe-e--ecCcchHHHHHHHHH
Confidence 58999999999999985 9999999999999999999999741 110 00000 0000000 0 034678999999998
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
+.+..+.++|||.||.+|++.||+||++. +.+..+++||-.-.-.+.+.+..++.++
T Consensus 142 ~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 142 SLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 88888999999999999999999999995 6777777777666656788888777664
No 54
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.02 E-value=1.2e-09 Score=107.11 Aligned_cols=104 Identities=15% Similarity=0.215 Sum_probs=84.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHHHhhcCCEE
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKCLKLKGHVV 595 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~l~~~g~~v 595 (881)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+-...+++.+.-..+.+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------~f~~~kpkp~~~~~~~~~l~~~~~ev 101 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------FHEGIKKKTEPYAQMLEEMNISDAEV 101 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------EEecCCCCHHHHHHHHHHcCcCHHHE
Confidence 47899999999999999999999999999999985 33333 2333334444443334679
Q ss_pred EEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHH
Q 043535 596 AVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATA 641 (881)
Q Consensus 596 ~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 641 (881)
+++||+.||.+|++.|++++||+ |+.+.++..|++++..++-.+.
T Consensus 102 ~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 102 CYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred EEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 99999999999999999999999 9999999999999876665544
No 55
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.00 E-value=1.6e-09 Score=115.42 Aligned_cols=133 Identities=22% Similarity=0.260 Sum_probs=99.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------------------------------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP------------------------------------- 553 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------------------------------- 553 (881)
++.+++.++|++++++|++++++|||+...+..+.+++|+..+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5888999999999999999999999999999999999998743
Q ss_pred ------------hhhcC-------------------------------------CHH---HHHHHHhh------hee---
Q 043535 554 ------------EFRNY-------------------------------------TEE---EKMEKVEK------IYV--- 572 (881)
Q Consensus 554 ------------~~~~~-------------------------------------~~~---~~~~~~~~------~~v--- 572 (881)
..... +++ ++.+.+.+ ..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 00000 000 01111110 101
Q ss_pred ---eeccCH--HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHH
Q 043535 573 ---MARASP--DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 573 ---~~~~~p--~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
+....| ..|+..++.+.++ .+.++++||+.||++|++.|+.|+||+ |+.+.+|+.||+++.+++.+++.+
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 112222 2588888887765 246899999999999999999999999 999999999999999999888876
Q ss_pred H
Q 043535 644 L 644 (881)
Q Consensus 644 ~ 644 (881)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.95 E-value=6.3e-09 Score=110.74 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=95.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch-------------h--h--------hcCCHHHHHHHHh
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP-------------E--F--------RNYTEEEKMEKVE 568 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------~--~--------~~~~~~~~~~~~~ 568 (881)
..+.+.++|++++++|++++++|||+...+..+.+++|+..+ . . ..++.+...+.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999998643 0 0 0012111111000
Q ss_pred -----------------------------------------------------------h--hee-----eeccCH--HH
Q 043535 569 -----------------------------------------------------------K--IYV-----MARASP--DD 580 (881)
Q Consensus 569 -----------------------------------------------------------~--~~v-----~~~~~p--~~ 580 (881)
+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 000 000111 24
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCccEeeCCCCc---HHHHhh--c-CeeeccCCchHHHHHHHH
Q 043535 581 KLAMVKCLKLK------GHVVAVTGNGIKDAPALEEANVGLSMGIQGT---AVAKES--S-DIIILDDNFATAVTLLNW 647 (881)
Q Consensus 581 K~~~v~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~~ 647 (881)
|+..++.+.++ .+.++++||+.||.+|++.||+||||+ |+. +.+|+. | ++|+.+++.+++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 66666666544 456999999999999999999999999 887 478886 4 599999999999988864
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.94 E-value=4.1e-09 Score=102.60 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=84.2
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
+|++|+++|+++.++||++...+..+.+++|+.. .+... ..|.+.++.+.++ .+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------~~~~~--~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------LYQGQ--SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------EEecc--cchHHHHHHHHHHcCCCHHH
Confidence 8999999999999999999999999999999975 33322 3455555555432 457
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchH-HHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFAT-AVT 643 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~-i~~ 643 (881)
++++||+.||.+|++.|+++++|. ++.+..+..||+++.++.-.+ +.+
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~ 143 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVRE 143 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHH
Confidence 999999999999999999999998 888999999999998765444 443
No 58
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.92 E-value=6.6e-09 Score=111.49 Aligned_cols=136 Identities=10% Similarity=-0.004 Sum_probs=95.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc-h----------hh-h------------cCCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK-P----------EF-R------------NYTEEEKMEK 566 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~-~----------~~-~------------~~~~~~~~~~ 566 (881)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+.. + .. . .++.+...+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 355789999999999999999999999999999999999852 2 00 0 0111111000
Q ss_pred H-------------------------------------------------------------h--hhee-----eeccCH
Q 043535 567 V-------------------------------------------------------------E--KIYV-----MARASP 578 (881)
Q Consensus 567 ~-------------------------------------------------------------~--~~~v-----~~~~~p 578 (881)
+ . .+.+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 0 0 0000 011122
Q ss_pred --HHHHHHHHHHhhc-------CCEEEEEcCCccCHHHHHhCCccEeeCCCCc-HH-----HHhhcCeeeccCCchHHHH
Q 043535 579 --DDKLAMVKCLKLK-------GHVVAVTGNGIKDAPALEEANVGLSMGIQGT-AV-----AKESSDIIILDDNFATAVT 643 (881)
Q Consensus 579 --~~K~~~v~~l~~~-------g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~-~~-----a~~~ad~vl~~~~~~~i~~ 643 (881)
..|+..++.+.++ ...|+++|||.||.+||+.|++||||+ ++. +. .+..+|+++...+-+++.+
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~ 262 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWRE 262 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHH
Confidence 2466666666553 357999999999999999999999999 444 32 4457999999999999998
Q ss_pred HHHH
Q 043535 644 LLNW 647 (881)
Q Consensus 644 ~i~~ 647 (881)
++++
T Consensus 263 ~l~~ 266 (271)
T PRK03669 263 GLDH 266 (271)
T ss_pred HHHH
Confidence 8764
No 59
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.85 E-value=1.1e-08 Score=106.19 Aligned_cols=128 Identities=20% Similarity=0.279 Sum_probs=93.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeec-cCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMAR-ASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~-~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+... +.. ...+ ...+ ...+... ..+..|..+++.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~--~~~~-~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE--DGKL-TGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE--CCEE-EEEecCcccCCcccHHHHHHH
Confidence 5899999999999999999999999999999999999998751 000 0000 0000 0000001 1123477777766
Q ss_pred hhcC----CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCchHHHHH
Q 043535 589 KLKG----HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 589 ~~~g----~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
.++. +.+.++||+.||++|.+.||++++++ +.+.++++||+++.++++..+..+
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 5542 35889999999999999999999985 578888999999999998877654
No 60
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.83 E-value=5.3e-09 Score=106.93 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=88.5
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++..--..+..++ ..+....+--.+..+.|.+.++.+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--G~ltG~v~g~~~~~~~K~~~l~~~~ 153 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--GKLTGRVVGPICDGEGKAKALRELA 153 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC--CEEeceeeeeecCcchHHHHHHHHH
Confidence 67899999999999999999999999999999999999999863000000000 0011111122344578888886666
Q ss_pred hc-CC---EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeecc
Q 043535 590 LK-GH---VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 590 ~~-g~---~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~ 635 (881)
+. |. .+.++|||.||.|||+.||.++++. +.+..+..|+.....
T Consensus 154 ~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 154 AELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred HHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 54 44 5889999999999999999999995 566666666665543
No 61
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.80 E-value=3.6e-08 Score=105.99 Aligned_cols=136 Identities=17% Similarity=0.124 Sum_probs=96.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch----------hhh---------------------cC
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP----------EFR---------------------NY 558 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~----------~~~---------------------~~ 558 (881)
+.+.+++.++|++|+++|++++++|||....+..+++++|+..+ ... .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 45678899999999999999999999999999999999998643 000 01
Q ss_pred CHHHHHHHH---------------------------------h---h--he-eee-ccCH--------------------
Q 043535 559 TEEEKMEKV---------------------------------E---K--IY-VMA-RASP-------------------- 578 (881)
Q Consensus 559 ~~~~~~~~~---------------------------------~---~--~~-v~~-~~~p-------------------- 578 (881)
+.+...+.+ . . .. ++. .-++
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 111110000 0 0 00 000 0011
Q ss_pred ---------HHHHHHHHHHhhc----C-CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHH----hhc-Ceee--ccCC
Q 043535 579 ---------DDKLAMVKCLKLK----G-HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAK----ESS-DIII--LDDN 637 (881)
Q Consensus 579 ---------~~K~~~v~~l~~~----g-~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~----~~a-d~vl--~~~~ 637 (881)
..|...++.+.++ . ..|+++||+.||.+|++.|++|+||+ |+.+.+| .+| +.++ ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 1566666666543 4 88999999999999999999999999 9999999 666 6777 5677
Q ss_pred chHHHHHHH
Q 043535 638 FATAVTLLN 646 (881)
Q Consensus 638 ~~~i~~~i~ 646 (881)
-+++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 889988775
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.75 E-value=3.2e-08 Score=99.35 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=81.1
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CC
Q 043535 518 KAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GH 593 (881)
Q Consensus 518 ~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~ 593 (881)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.+. ..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------~f~--g~~~k~~~l~~~~~~~gl~~~ 113 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------LYQ--GQSNKLIAFSDLLEKLAIAPE 113 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------eec--CCCcHHHHHHHHHHHhCCCHH
Confidence 68999999999999999999999999999999875 343 224466665555433 35
Q ss_pred EEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC
Q 043535 594 VVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN 637 (881)
Q Consensus 594 ~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 637 (881)
.++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+.
T Consensus 114 ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 114 QVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 7999999999999999999999987 788888999999997544
No 63
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.75 E-value=3.2e-08 Score=91.70 Aligned_cols=113 Identities=19% Similarity=0.262 Sum_probs=91.7
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc----CCE
Q 043535 519 AVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK----GHV 594 (881)
Q Consensus 519 ~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~----g~~ 594 (881)
.|+.+++.|+++.++|||+...+..-|+++|+.. +|- --++|....+.+.++ -+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------------------~~q--G~~dK~~a~~~L~~~~~l~~e~ 101 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------------------LYQ--GISDKLAAFEELLKKLNLDPEE 101 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------------------eee--chHhHHHHHHHHHHHhCCCHHH
Confidence 5899999999999999999999999999999986 443 346777777666654 357
Q ss_pred EEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCCch----HHHHHHHHhHHHHH
Q 043535 595 VAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDNFA----TAVTLLNWGRCVYV 653 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~~~----~i~~~i~~gR~~~~ 653 (881)
|+++||..||.|+|+..++++|+. ++.+..++.||+|+....-. .+.++|..++..+.
T Consensus 102 ~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 102 VAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred hhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 999999999999999999999999 99999999999999865433 33445555554443
No 64
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.63 E-value=1.1e-07 Score=99.90 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC----eeeccCCchHHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD----IIILDDNFATAVTLLNW 647 (881)
Q Consensus 580 ~K~~~v~~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~~ 647 (881)
.|...++.+.++ | ..++++||+.||.+|++.+++||+|+ |+.+.+|+.|| +++.+++-.++.++|.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 577778777664 2 25889999999999999999999999 99999999999 88888888999988864
No 65
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.57 E-value=2.3e-07 Score=98.30 Aligned_cols=138 Identities=16% Similarity=0.157 Sum_probs=99.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh----------------------------------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE---------------------------------- 554 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~---------------------------------- 554 (881)
..+..|...+++++++++|+.++++|||+...+..+.+++++..++
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3457799999999999999999999999999999999998876540
Q ss_pred -------hhcC-----------------CHHH----H---HHHHhh----hee-ee-----ccCH--HHHHHHHHHHhhc
Q 043535 555 -------FRNY-----------------TEEE----K---MEKVEK----IYV-MA-----RASP--DDKLAMVKCLKLK 591 (881)
Q Consensus 555 -------~~~~-----------------~~~~----~---~~~~~~----~~v-~~-----~~~p--~~K~~~v~~l~~~ 591 (881)
+..+ ..+. . .+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000 1 111111 111 11 2233 3688888888764
Q ss_pred ----CCEEEEEcCCccCHHHHHh-CCccEeeCCCCcHHHHhhcC-------eeeccCCchHHHHHHHH
Q 043535 592 ----GHVVAVTGNGIKDAPALEE-ANVGLSMGIQGTAVAKESSD-------IIILDDNFATAVTLLNW 647 (881)
Q Consensus 592 ----g~~v~~iGDg~ND~~~l~~-A~vgIam~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~~ 647 (881)
...|+++||+.||.+|++. ++.|++|+ |+.+.+|+.++ ++.....-+++.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 3578999999999999998 67999999 99999887654 77777778888888764
No 66
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.55 E-value=5e-07 Score=92.69 Aligned_cols=126 Identities=20% Similarity=0.219 Sum_probs=89.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee--ccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA--RASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~--~~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+... +...-. ...+..+.. ...|+.|...++.+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~~~~-----~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCHSLE-----VDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcceEE-----ECCCCeEECccccccchHHHHHHHH
Confidence 4689999999999999 99999999999999999999998641 100000 000000111 12467888999999
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCe-eeccCCchHHHHHHH
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDI-IILDDNFATAVTLLN 646 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~-vl~~~~~~~i~~~i~ 646 (881)
+..+..++|+|||.||.+|.+.|++|+..+ ...+.....+++ ++. ++..+...+.
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~ 196 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAID 196 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHH
Confidence 888899999999999999999999999886 433334445565 333 4555554443
No 67
>PRK08238 hypothetical protein; Validated
Probab=98.53 E-value=3.7e-05 Score=88.20 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=70.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+.-+.. + -..+..|+.|.+.++....
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigs-d------------~~~~~kg~~K~~~l~~~l~ 138 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFAS-D------------GTTNLKGAAKAAALVEAFG 138 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeC-C------------CccccCCchHHHHHHHHhC
Confidence 47899999999999999999999999999999999999973210000 0 0113455667665543222
Q ss_pred cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
. +.+.++||+.||.+|++.|+-.++++
T Consensus 139 ~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 139 E-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred c-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 2 22567899999999999999999997
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.48 E-value=2.7e-07 Score=88.45 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh-cCCHHHHHHHHhhheee----eccCHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR-NYTEEEKMEKVEKIYVM----ARASPDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~v~----~~~~p~~K~~~v 585 (881)
.+.|++++.++.|++.|.+|+++||.-..-+..+|.++||+..+.- +...-. ...+..-| .-+....|.+++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd---~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD---KDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---cCCcccccccCCccccCCccHHHH
Confidence 4689999999999999999999999999999999999999863100 000000 00000001 111234699999
Q ss_pred HHHhhc--CCEEEEEcCCccCHHHHHhCCccEeeCCC
Q 043535 586 KCLKLK--GHVVAVTGNGIKDAPALEEANVGLSMGIQ 620 (881)
Q Consensus 586 ~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~ 620 (881)
+.+++. -..++|||||+||.+|+..|+.=|+.+++
T Consensus 165 ~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 165 ALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGN 201 (227)
T ss_pred HHHHhCCChheeEEecCCccccccCCchhhhhccCCc
Confidence 999885 35789999999999999998887877643
No 69
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.45 E-value=6.7e-07 Score=91.32 Aligned_cols=116 Identities=20% Similarity=0.200 Sum_probs=79.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
+++|++.+.++.|+++|+++.++|+.....+..+++.+|+... +... ..++ .... +-..+....|..|.+.++.+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~-~g~~-~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE-KGFI-QPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC-CCeE-ecceeeEEccccHHHHHHHHH
Confidence 5899999999999999999999999999999999999998641 0000 0000 0000 000111123456777777665
Q ss_pred hc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcC
Q 043535 590 LK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSD 630 (881)
Q Consensus 590 ~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad 630 (881)
+. .+.++++||+.||.+|++.||++++++ ......+.++|
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 43 346899999999999999999999997 43444444444
No 70
>PLN02382 probable sucrose-phosphatase
Probab=98.38 E-value=1.3e-06 Score=98.81 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=92.8
Q ss_pred CCccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh------------------------------------
Q 043535 512 CRPGLKKAV-EDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE------------------------------------ 554 (881)
Q Consensus 512 ~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~------------------------------------ 554 (881)
+.+...+++ +++++.|+.++++|||.+..+..+.++.++..++
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 343445555 8899999999999999999999999999876650
Q ss_pred --hhcC--------------------CHHH-------HHHHHhh----hee------eeccCHH--HHHHHHHHHhhc--
Q 043535 555 --FRNY--------------------TEEE-------KMEKVEK----IYV------MARASPD--DKLAMVKCLKLK-- 591 (881)
Q Consensus 555 --~~~~--------------------~~~~-------~~~~~~~----~~v------~~~~~p~--~K~~~v~~l~~~-- 591 (881)
...+ .++. +.+.+.+ +.+ +..+.|. .|+..++.+.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0000 0001 1111110 111 2233443 599999888765
Q ss_pred -----CCEEEEEcCCccCHHHHHhCC-ccEeeCCCCcHHHHhhc--------Ceeec-cCCchHHHHHHHH
Q 043535 592 -----GHVVAVTGNGIKDAPALEEAN-VGLSMGIQGTAVAKESS--------DIIIL-DDNFATAVTLLNW 647 (881)
Q Consensus 592 -----g~~v~~iGDg~ND~~~l~~A~-vgIam~~~~~~~a~~~a--------d~vl~-~~~~~~i~~~i~~ 647 (881)
...++++||+.||.+||+.|+ .||+|+ |+.+.+|+.+ +++.. +++-+++.+++.+
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 247899999999999999999 699999 9999998753 44433 5567788877754
No 71
>PLN02954 phosphoserine phosphatase
Probab=98.21 E-value=1.1e-05 Score=84.09 Aligned_cols=123 Identities=18% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-hhc---CCHHHHHHHHhhheeeec------cCHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-FRN---YTEEEKMEKVEKIYVMAR------ASPDD 580 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-~~~---~~~~~~~~~~~~~~v~~~------~~p~~ 580 (881)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+.... +.. ..++ ..+... .....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--------g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--------GEYAGFDENEPTSRSGG 155 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--------CcEECccCCCcccCCcc
Confidence 47899999999999999999999999999999999999997311 000 0000 000000 11234
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCccCHHHHHhC--CccEeeCCCC-cHHHHhhcCeeeccCCchHHHH
Q 043535 581 KLAMVKCLKLK--GHVVAVTGNGIKDAPALEEA--NVGLSMGIQG-TAVAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 581 K~~~v~~l~~~--g~~v~~iGDg~ND~~~l~~A--~vgIam~~~~-~~~a~~~ad~vl~~~~~~~i~~ 643 (881)
|.+.++.+.+. .+.++++||+.||+.|.+.+ +++++.++.. .+.....+|+++.+ +..+.+
T Consensus 156 K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 156 KAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 77777777654 35788999999999998884 5555555222 23345568998864 555543
No 72
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.17 E-value=1.1e-05 Score=83.22 Aligned_cols=133 Identities=13% Similarity=0.091 Sum_probs=84.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----cCCHHHHHHHHhhheee--eccCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----NYTEEEKMEKVEKIYVM--ARASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----~~~~~~~~~~~~~~~v~--~~~~p~~K~~ 583 (881)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +. ....+.+....+.-..+ .......|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 46899999999999999999999999999999998888754321 10 00000000000000000 0000235899
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHh--hcCeeeccCCchHHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKE--SSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~--~ad~vl~~~~~~~i~~~i~ 646 (881)
+++.++...+.++|+|||.||.+|.+.||+.+|-+ .-.+..++ .+.+.. +++..+...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 99998888888999999999999999999977743 21121221 122222 45777766553
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.14 E-value=8.5e-06 Score=83.33 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=76.1
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheee-eccCHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVM-ARASPDDKLAMVK 586 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~-~~~~p~~K~~~v~ 586 (881)
..++++++.+.++.++++|++++++||.....+..+++.+|+... +.. +...+ ...... .+. ..+.++.|...++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~-~g~~~g-~~~~~~~~g~~K~~~l~ 161 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE-DGIYTG-NIDGNNCKGEGKVHALA 161 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC-CCEEeC-CccCCCCCChHHHHHHH
Confidence 346899999999999999999999999999999999999999741 000 00000 000000 000 1133567887777
Q ss_pred HHhhc-C---CEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 587 CLKLK-G---HVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 587 ~l~~~-g---~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
.+.+. + +.+.++||+.+|.+|++.||.++++.
T Consensus 162 ~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 162 ELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 66543 3 36889999999999999999999986
No 74
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.14 E-value=2e-05 Score=81.90 Aligned_cols=44 Identities=11% Similarity=0.103 Sum_probs=39.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.+...+++.++|++++++|++++++|||....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999754
No 75
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.11 E-value=6.2e-06 Score=82.32 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=69.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc---CCHHHHHHHHhhheee--eccCHHHHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN---YTEEEKMEKVEKIYVM--ARASPDDKLAMVK 586 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~~~~~~~~~~~v~--~~~~p~~K~~~v~ 586 (881)
++|++.+.++.++++|++++++||.....+..+++.+|+... +.. ..++. .+.. ... ....+..|...++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~~g---~~~g-~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDDNG---LLTG-PIEGQVNPEGECKGKVLK 148 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECCCC---EEeC-ccCCcccCCcchHHHHHH
Confidence 689999999999999999999999999999999999998641 000 00000 0000 000 1234578999998
Q ss_pred HHhhc----CCEEEEEcCCccCHHHHHhC
Q 043535 587 CLKLK----GHVVAVTGNGIKDAPALEEA 611 (881)
Q Consensus 587 ~l~~~----g~~v~~iGDg~ND~~~l~~A 611 (881)
.+++. .+.++++|||.||.+|++.|
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 87654 34689999999999999875
No 76
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.10 E-value=7.9e-06 Score=82.71 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=68.0
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH---HHHHHHHHH--
Q 043535 514 PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD---DKLAMVKCL-- 588 (881)
Q Consensus 514 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~---~K~~~v~~l-- 588 (881)
+++.+.|+.++++|++++++||.....+.++++.+|++...+....... -.+.....+.++. .|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~K~~~l~~~~~ 167 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFD----NGGGIFTGRITGSNCGGKAEALKELYI 167 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEEC----TTCCEEEEEEEEEEESHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeee----cccceeeeeECCCCCCcHHHHHHHHHH
Confidence 8888999999999999999999999999999999999863110000000 0011123333433 399999999
Q ss_pred ----hhcCCEEEEEcCCccCHHHHH
Q 043535 589 ----KLKGHVVAVTGNGIKDAPALE 609 (881)
Q Consensus 589 ----~~~g~~v~~iGDg~ND~~~l~ 609 (881)
+.....++++|||.||.+|+|
T Consensus 168 ~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 168 RDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HhhcCCCCCeEEEEECCHHHHHHhC
Confidence 345789999999999999996
No 77
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.08 E-value=2e-05 Score=81.89 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=36.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
..+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3345899999999999999999999999999999999986
No 78
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.01 E-value=2e-05 Score=81.66 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=72.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh----cCCHHHHHHHHhhheeeeccCH--------
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR----NYTEEEKMEKVEKIYVMARASP-------- 578 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~----~~~~~~~~~~~~~~~v~~~~~p-------- 578 (881)
+++|++.+.++.|+++|+++.++||-....+..+.+.+ +....+- ..+.+.. -...-.|
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~--------~~~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYI--------TITWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCee--------EEeccCCcccccccc
Confidence 58999999999999999999999999999999999887 6431100 0000000 0000011
Q ss_pred --HHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 579 --DDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 579 --~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
..|..+++.++.....+.++|||.||+.|.+.||+.++
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 24888888888777789999999999999999999776
No 79
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.98 E-value=2e-05 Score=79.37 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=74.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCC-------HHH-HHHHHhhheeeec-cCHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYT-------EEE-KMEKVEKIYVMAR-ASPDD 580 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~-------~~~-~~~~~~~~~v~~~-~~p~~ 580 (881)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+... ++..- ++. +.....++..+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV-FIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh-eeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 36899999999999999999999999999999999999988641 11000 000 0000000000011 11235
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKLK-GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~~-g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
|.++++.+++. .+.++++|||.||+.|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 89999999887 8899999999999999999987654
No 80
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.97 E-value=5.9e-05 Score=87.89 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
.-+.+.++|++++++|+.++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4467899999999999999999999999999999999974
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=5.3e-05 Score=78.88 Aligned_cols=126 Identities=20% Similarity=0.280 Sum_probs=85.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc--CHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--SPDDKLAMVKC 587 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~ 587 (881)
.++.|++.+.++.+++.|+++.++||.....+..+.+..|+... ++. ..... -.... .|+--..+++.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~--------~~~~~-~~~~~kp~~~~~~~~~~~ 161 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY-FSV--------VIGGD-SLPNKKPDPAPLLLACEK 161 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC-ccE--------EEcCC-CCCCCCcChHHHHHHHHH
Confidence 45889999999999999999999999999999999999998641 110 00000 00111 22222344444
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCc-cEeeC--CC-CcHHHHhhcCeeeccCCchHHHHHHHH
Q 043535 588 LKLKGHVVAVTGNGIKDAPALEEANV-GLSMG--IQ-GTAVAKESSDIIILDDNFATAVTLLNW 647 (881)
Q Consensus 588 l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i~~ 647 (881)
++...+.++++||+.||+.|.+.||+ +|.+. .+ ..+.....+|+++. ++..+...+.+
T Consensus 162 ~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 162 LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 54446679999999999999999999 55553 11 22344456888874 57777766654
No 82
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=2.8e-05 Score=81.62 Aligned_cols=44 Identities=7% Similarity=0.045 Sum_probs=39.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP 553 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~ 553 (881)
+...+.+.++|++|+++||.++++||+.......+.+++|+..+
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 44667799999999999999999999999999999999998643
No 83
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.95 E-value=5.5e-05 Score=80.71 Aligned_cols=128 Identities=9% Similarity=0.212 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCCch------------h--hhcCCH---------------
Q 043535 511 PCRPGLKKAVEDCQY-AGVNIKMITGDNIFTAKAIATQCGILKP------------E--FRNYTE--------------- 560 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~--~~~~~~--------------- 560 (881)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++.-. + ...++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 7999999999999999988877664210 0 000111
Q ss_pred -------------------------HHHHHH---Hh-h---he-----eeeccCH--HHHHHHHHHHhhc----CCEEEE
Q 043535 561 -------------------------EEKMEK---VE-K---IY-----VMARASP--DDKLAMVKCLKLK----GHVVAV 597 (881)
Q Consensus 561 -------------------------~~~~~~---~~-~---~~-----v~~~~~p--~~K~~~v~~l~~~----g~~v~~ 597 (881)
+.+.+. +. . .. -+..+.| .+|+..++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 111111 10 0 00 1112223 3688888877655 357899
Q ss_pred EcCCccCHHHHHhC----CccEeeCCCCcHHHHhhcCeeeccCCchHHHHHH
Q 043535 598 TGNGIKDAPALEEA----NVGLSMGIQGTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 598 iGDg~ND~~~l~~A----~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+||+.||.+||+.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999 664 34677776 355555444
No 84
>PTZ00174 phosphomannomutase; Provisional
Probab=97.93 E-value=3.2e-05 Score=81.74 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhC-CccEeeCCCCcHHHHhhcCee
Q 043535 580 DKLAMVKCLKLKGHVVAVTGN----GIKDAPALEEA-NVGLSMGIQGTAVAKESSDII 632 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGD----g~ND~~~l~~A-~vgIam~~~~~~~a~~~ad~v 632 (881)
+|+..++.+.++.+.|+++|| |.||.+||+.| -.|++++ |+.+.+|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 688888888887788999999 99999999976 5678887 8999888877654
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.92 E-value=4e-05 Score=72.24 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=74.2
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHH--------HHhhheeeeccCHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKME--------KVEKIYVMARASPD 579 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------~~~~~~v~~~~~p~ 579 (881)
-..++.+++.+.+++|+++|++++++||+....+...++.+|+....-.-...+.... .......+.+-.++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4458899999999999999999999999999999999999998431000000000000 00001122344566
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC-ccEe
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEAN-VGLS 616 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~-vgIa 616 (881)
.+..+.+.+......++++||+.+|+.|.+.++ -+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 666666666655678999999999999999844 3443
No 86
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.91 E-value=3.7e-05 Score=79.73 Aligned_cols=120 Identities=21% Similarity=0.360 Sum_probs=88.8
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-c------cCHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-R------ASPDDK 581 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-~------~~p~~K 581 (881)
...+-|++.++++.|+++|++..++|+++...+..+.+..|+... +.. +++ + -.|...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~-F~~--------------i~g~~~~~~~KP~P~~l 151 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY-FDV--------------IVGGDDVPPPKPDPEPL 151 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc-cce--------------EEcCCCCCCCCcCHHHH
Confidence 456889999999999999999999999999999999999999862 110 122 2 234445
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCC---ccEeeCCC-CcHHHHhhcCeeeccCCchHHHHHH
Q 043535 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEAN---VGLSMGIQ-GTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 582 ~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~---vgIam~~~-~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
..+.+.+....+.++||||..+|+.|=+.|+ +|+..|.+ ........+|+++.+ ...+...+
T Consensus 152 ~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 5555555544457999999999999999999 66777643 344555669999874 55555443
No 87
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.79 E-value=7.8e-05 Score=78.59 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHH-----HHhhc---C-eeeccCCchHHHHHH
Q 043535 579 DDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAV-----AKESS---D-IIILDDNFATAVTLL 645 (881)
Q Consensus 579 ~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 645 (881)
..|...++.++++ .+.|+++||+.||.+||..++-||.++ |+.+. ..... . +......-.+|++.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 4799999999877 245777899999999999999999999 88877 22222 2 444455666777777
Q ss_pred HH
Q 043535 646 NW 647 (881)
Q Consensus 646 ~~ 647 (881)
.|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.76 E-value=0.00017 Score=73.85 Aligned_cols=123 Identities=15% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh-eeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI-YVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~-~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.+++|+++|+++.++|+.....+....+..|+... ++.. +... ....+-.|+--.++++.+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~-f~~i--------~~~~~~~~~KP~~~~~~~~~~~~~ 145 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL-FDHV--------IGSDEVPRPKPAPDIVREALRLLD 145 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh-eeeE--------EecCcCCCCCCChHHHHHHHHHcC
Confidence 6789999999999999999999999999999999999998641 1100 0000 0011222333334444444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccEe-e--CC-CCcHHHHhhcCeeeccCCchHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGLS-M--GI-QGTAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~-~~~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
-..+.+++|||+.+|+.+-+.||+... + |. +..+..+..+|+++.+ +..+..+
T Consensus 146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~ 202 (205)
T TIGR01454 146 VPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLAL 202 (205)
T ss_pred CChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHH
Confidence 445679999999999999999999632 2 21 2233456678998753 5555543
No 89
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.62 E-value=0.00032 Score=72.37 Aligned_cols=119 Identities=13% Similarity=0.182 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+... ++. .+.+ +..|+--.++
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-f~~-------------i~~~~~~~~~Kp~p~~~~~~ 147 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF-FDV-------------VITLDDVEHAKPDPEPVLKA 147 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc-eeE-------------EEecCcCCCCCCCcHHHHHH
Confidence 3789999999999999999999999999999999999998751 110 0111 1223333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc---EeeCCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG---LSMGIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg---Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
++.+......+++|||+.+|+.|-+.||+- +.-+....+ .....+|+++. ++..+.+.+
T Consensus 148 ~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 148 LELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 444444456789999999999999999994 323311222 23345888875 466666543
No 90
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.60 E-value=0.00022 Score=73.03 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=36.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 549 (881)
++.+.+.+++++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 577999999999999999999999999999999988754
No 91
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.54 E-value=0.00043 Score=84.78 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCCc--h----------hh---h------------------
Q 043535 511 PCRPGLKKAVEDCQY-AGVNIKMITGDNIFTAKAIATQCGILK--P----------EF---R------------------ 556 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~-~Gi~v~~~TGd~~~~a~~ia~~~gi~~--~----------~~---~------------------ 556 (881)
.+.+++.+++++|.+ .|+.|+++|||............++.- . +. .
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 699999999999999988776555311 0 00 0
Q ss_pred --------------------cCCHH-------HHHHHHhh------hee-----eeccCH--HHHHHHHHHHhhc--CCE
Q 043535 557 --------------------NYTEE-------EKMEKVEK------IYV-----MARASP--DDKLAMVKCLKLK--GHV 594 (881)
Q Consensus 557 --------------------~~~~~-------~~~~~~~~------~~v-----~~~~~p--~~K~~~v~~l~~~--g~~ 594 (881)
..+++ ++.+.+.. ..+ +..+.| -+|+..++.+.+. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00000 01111111 000 111223 3688888888764 357
Q ss_pred EEEEcCCccCHHHHHhC---CccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 595 VAVTGNGIKDAPALEEA---NVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 595 v~~iGDg~ND~~~l~~A---~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
++++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. ..+...++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 99999999999999986 6889998 53 56788998754 44554443
No 92
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.53 E-value=0.00048 Score=73.84 Aligned_cols=120 Identities=20% Similarity=0.266 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH------HH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK------LA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K------~~ 583 (881)
.++.|++.++++.|+++|+++.++||.+...+..+.++.|+... ++ ..+.+...+..| ..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~-f~-------------~i~~~d~~~~~Kp~p~~~~~ 165 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY-FR-------------WIIGGDTLPQKKPDPAALLF 165 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh-Ce-------------EEEecCCCCCCCCCcHHHHH
Confidence 46789999999999999999999999999999988888887531 10 012222222222 22
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC--CC-CcHHHHhhcCeeeccCCchHHHHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG--IQ-GTAVAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~--~~-~~~~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+.+.+.-..+.+++|||+.||+.|.+.||+. +++. .+ ..+.....+|+++. ++..+.+++
T Consensus 166 ~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 166 VMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2333322346799999999999999999983 4443 12 22234457898884 466665443
No 93
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.51 E-value=0.00038 Score=71.70 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-----cC--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-----AS--PDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-----~~--p~~K~~ 583 (881)
++.|++.+.++.|+++|+++.++|+.+...+..+.++.|+... ++. +++. .. |+-=..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~~--------------~~~~~~~~~~Kp~p~~~~~ 149 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY-FSV--------------LIGGDSLAQRKPHPDPLLL 149 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh-CcE--------------EEecCCCCCCCCChHHHHH
Confidence 5789999999999999999999999999999999999998641 110 1111 12 222223
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe-e--CCCC-cHHHHhhcCeeeccCCchHHH
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS-M--GIQG-TAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~-~~~a~~~ad~vl~~~~~~~i~ 642 (881)
+.+.+.-....++++||+.+|+.|.+.||+... + |... .+.....+|+++.+ +..+.
T Consensus 150 ~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 150 AAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 333333334679999999999999999998643 3 2111 12233468888753 44443
No 94
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.34 E-value=0.0025 Score=63.08 Aligned_cols=133 Identities=21% Similarity=0.326 Sum_probs=90.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh-------hh--cCCH------------------HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE-------FR--NYTE------------------EEK 563 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~-------~~--~~~~------------------~~~ 563 (881)
.+-|++.++++.|++.= ..+++|-.-..-+.++|..+|++..+ ++ ..++ +++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 46799999999998874 45555666677788999999996541 11 1112 222
Q ss_pred HHHHhhheeeeccCHHHHHHHHHHHhhc------------------CCEEEEEcCCccCHHHHHhCC-cc-EeeCCCCcH
Q 043535 564 MEKVEKIYVMARASPDDKLAMVKCLKLK------------------GHVVAVTGNGIKDAPALEEAN-VG-LSMGIQGTA 623 (881)
Q Consensus 564 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~------------------g~~v~~iGDg~ND~~~l~~A~-vg-Iam~~~~~~ 623 (881)
.+.+.. +|.|..|.+-.+++...+.- ....+++||+..|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 67888876655554444332 224578899999999999873 33 666668889
Q ss_pred HHHhhcCeeeccCCchHHHHHHH
Q 043535 624 VAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 624 ~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
-+...||+.+.+.+.......|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 89999999998887777666554
No 95
>PRK11590 hypothetical protein; Provisional
Probab=97.30 E-value=0.002 Score=66.39 Aligned_cols=100 Identities=10% Similarity=0.059 Sum_probs=71.9
Q ss_pred CCCccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCC---Cch---hhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAV-EDCQYAGVNIKMITGDNIFTAKAIATQCGI---LKP---EFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I-~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi---~~~---~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+ +.- +++. ....-..-..+..++|..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~--------~~tg~~~g~~c~g~~K~~ 166 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQR--------RYGGWVLTLRCLGHEKVA 166 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEE--------EEccEECCccCCChHHHH
Confidence 4589999999 578889999999999999999999999995 220 1000 000000112245678888
Q ss_pred HHHHHh-hcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 584 MVKCLK-LKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 584 ~v~~l~-~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
-++..- .......+-||+.||.|||+.|+.+++++
T Consensus 167 ~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 167 QLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 777553 23344556799999999999999999995
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.30 E-value=0.0017 Score=66.73 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=71.7
Q ss_pred CCCccHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch------hhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 511 PCRPGLKKAVE-DCQYAGVNIKMITGDNIFTAKAIATQCGILKP------EFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~-~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~------~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..++... +++.... ....-..+..++|.+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~g--------g~~~g~~c~g~~Kv~ 165 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNG--------GWVLPLRCLGHEKVA 165 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCC--------ceEcCccCCChHHHH
Confidence 46899999996 78889999999999999999999998655221 1110000 000112355678888
Q ss_pred HHHHHhh-cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 584 MVKCLKL-KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 584 ~v~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
-++..-. ......+-||+.||.|||+.||.+++++
T Consensus 166 rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 166 QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7765532 2334556799999999999999999996
No 97
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.28 E-value=0.001 Score=69.10 Aligned_cols=110 Identities=14% Similarity=0.213 Sum_probs=74.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-----cCHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-----ASPDDKLAM 584 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-----~~p~~K~~~ 584 (881)
-++.|++.++++.|+++|+++.++|+........+.++.|+... ++ .+++. ..|.-. -+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f~--------------~~~~~~~~~~~Kp~~~-~~ 154 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY-FD--------------ALASAEKLPYSKPHPE-VY 154 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc-cc--------------EEEEcccCCCCCCCHH-HH
Confidence 35789999999999999999999999999999999999998651 11 01111 112111 22
Q ss_pred HHHHhhc---CCEEEEEcCCccCHHHHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 585 VKCLKLK---GHVVAVTGNGIKDAPALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~---g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
.+.+++. .+.++++||+.||+.+-+.||+....-..+. +.-...+|+++.+
T Consensus 155 ~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 155 LNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 2333333 3568999999999999999998754331221 1223357777653
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.19 E-value=0.0022 Score=68.55 Aligned_cols=118 Identities=10% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH-Hh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC-LK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~-l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+.. .++. .+.+...+ .|.+.+.. ++
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~-------------vi~~~~~~-~k~~~~~~~l~ 206 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSV-------------VQAGTPIL-SKRRALSQLVA 206 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEE-------------EEecCCCC-CCHHHHHHHHH
Confidence 578999999999999999999999999999999999999865 1110 01111111 12233332 22
Q ss_pred h---cCCEEEEEcCCccCHHHHHhCCccEe-e--CCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 590 L---KGHVVAVTGNGIKDAPALEEANVGLS-M--GIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 590 ~---~g~~v~~iGDg~ND~~~l~~A~vgIa-m--~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
+ ..+.+++|||+.+|+.+-+.||+-.. + |.+..+ .....+|+++. ++..+.+.+
T Consensus 207 ~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 207 REGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 2 34579999999999999999998633 2 211222 22346899885 466666543
No 99
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.14 E-value=0.0025 Score=67.36 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=79.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+... ++. .+.+ +-.|+--..+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-Fd~-------------iv~~~~~~~~KP~p~~~~~a 173 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-FQA-------------VIIGSECEHAKPHPDPYLKA 173 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-CcE-------------EEecCcCCCCCCChHHHHHH
Confidence 4688999999999999999999999999999999999998741 110 1122 2223333444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccE-eeCC-CCcH-HHHhhcCeeeccCC
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGL-SMGI-QGTA-VAKESSDIIILDDN 637 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI-am~~-~~~~-~a~~~ad~vl~~~~ 637 (881)
.+.+.-..+.+++|||+.+|+.+-+.||+-. ++.. ...+ .....+|+++.+..
T Consensus 174 ~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~ 229 (248)
T PLN02770 174 LEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYE 229 (248)
T ss_pred HHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccch
Confidence 4555444567999999999999999999853 3321 1112 22346888887544
No 100
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.10 E-value=0.0011 Score=69.02 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=62.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-HHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD----NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS-PDDKLAMV 585 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~-p~~K~~~v 585 (881)
.+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+... +. .+++.-. +..|..-.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f~--------------~i~~~d~~~~~Kp~~~ 178 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-NP--------------VIFAGDKPGQYQYTKT 178 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-ee--------------EEECCCCCCCCCCCHH
Confidence 34555999999999999999999999 77799999999999751 10 1222211 00111112
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
..+++.+ .++|+||+.||..+-+.|++-
T Consensus 179 ~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 179 QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 3445555 478999999999999999884
No 101
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.10 E-value=0.0048 Score=61.03 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=34.9
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 515 GLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.+...+.+|+++|++|+.+|.........+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 47788999999999999999999999999999999873
No 102
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.10 E-value=0.0019 Score=68.22 Aligned_cols=127 Identities=12% Similarity=0.148 Sum_probs=81.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc------CCHHHHHHHHhhheeeeccCH----H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN------YTEEEKMEKVEKIYVMARASP----D 579 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------~~~~~~~~~~~~~~v~~~~~p----~ 579 (881)
-+++||+.+.++.|+++|+++.++||-....+..+.++.|+......- .+++. ..-.-..| .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG--------vltG~~~P~i~~~ 191 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG--------VLKGFKGPLIHTF 191 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC--------eEeCCCCCccccc
Confidence 467999999999999999999999999999999999999986421100 00000 00010112 3
Q ss_pred HHHHHHHH-H----h--hcCCEEEEEcCCccCHHHHHhC---Cc--cEeeCCCCc-----HHHHhhcCeeeccCCchHHH
Q 043535 580 DKLAMVKC-L----K--LKGHVVAVTGNGIKDAPALEEA---NV--GLSMGIQGT-----AVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 580 ~K~~~v~~-l----~--~~g~~v~~iGDg~ND~~~l~~A---~v--gIam~~~~~-----~~a~~~ad~vl~~~~~~~i~ 642 (881)
.|.+.+.. . . .....|+++|||.||++|..-. .- .|+.= |.. +.-+++=|+|+.+|.--.++
T Consensus 192 ~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfl-n~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 192 NKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYL-NDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred ccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEec-ccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 45554432 2 2 1235788999999999995433 11 23332 222 23457889999987666666
Q ss_pred HHH
Q 043535 643 TLL 645 (881)
Q Consensus 643 ~~i 645 (881)
..|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 554
No 103
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.09 E-value=0.003 Score=65.97 Aligned_cols=123 Identities=13% Similarity=0.106 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhh-eeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKI-YVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~-~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+.. .++.. .... .-..+-.|+-=..+++.+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i--------~~~~~~~~~KP~p~~~~~~~~~l~ 165 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVL--------IGGDTLAERKPHPLPLLVAAERIG 165 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEE--------EecCcCCCCCCCHHHHHHHHHHhC
Confidence 578999999999999999999999999988888888888864 11100 0000 0011223333345555555
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccE-ee--CCC-C-cHHHHhhcCeeeccCCchHHHHH
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGL-SM--GIQ-G-TAVAKESSDIIILDDNFATAVTL 644 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgI-am--~~~-~-~~~a~~~ad~vl~~~~~~~i~~~ 644 (881)
-..+.+++|||+.||+.|-+.||+.. ++ |.. . .......+|+++.+ +..+.+.
T Consensus 166 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~ 223 (229)
T PRK13226 166 VAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNP 223 (229)
T ss_pred CChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHH
Confidence 55678999999999999999999873 33 211 1 11233458998854 5555543
No 104
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.06 E-value=0.0033 Score=61.21 Aligned_cols=104 Identities=21% Similarity=0.193 Sum_probs=67.3
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHH-----cCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAK---AIATQ-----CGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~---~ia~~-----~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
+|...+++.+++++++++|++++++|||+...+. ....+ .+++...+-..+...... ..+ .+..+..-+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~-~~~-e~i~~~~~~~ 102 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA-LHR-EVISKKPEVF 102 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh-hhc-ccccCCHHHH
Confidence 4788999999999999999999999999988874 55555 224321000001111100 111 1222222234
Q ss_pred HHHHHHHHhh-----cCCEEEEEcCCccCHHHHHhCCcc
Q 043535 581 KLAMVKCLKL-----KGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 581 K~~~v~~l~~-----~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
|.+.++.+.+ ....++.+||+.+|+.+.+++++.
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 8888887776 345677799999999999887764
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.98 E-value=0.0017 Score=67.42 Aligned_cols=87 Identities=22% Similarity=0.206 Sum_probs=63.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN----IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~ 584 (881)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|++..+.. ..+++.-++ ..|..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-------------~vil~gd~~~K~~K~~- 179 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-------------PVIFAGDKPGQYTKTQ- 179 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-------------eEEEcCCCCCCCCHHH-
Confidence 477889999999999999999999975 6688899998999431100 013333222 33444
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
.+++.+ .++++||..+|..+-+.||+-
T Consensus 180 --~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 180 --WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 444555 478899999999999999984
No 106
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.96 E-value=0.004 Score=64.44 Aligned_cols=121 Identities=21% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC--chhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL--KPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVK 586 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~ 586 (881)
.++.||+.+.+++|+++|+++.++|+.....+..+.+.+|+. . .++.. +....+ ..+-.|+-=...++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~-~f~~i--------~~~~~~~~~KP~p~~~~~a~~ 156 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGD-DVDAV--------VCPSDVAAGRPAPDLILRAME 156 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhc-cCCEE--------EcCCcCCCCCCCHHHHHHHHH
Confidence 378999999999999999999999999999999999999986 2 11100 000000 01122222223333
Q ss_pred HHhhc-CCEEEEEcCCccCHHHHHhCCccE--eeCCCC--c-HH-HHhhcCeeeccCCchHHH
Q 043535 587 CLKLK-GHVVAVTGNGIKDAPALEEANVGL--SMGIQG--T-AV-AKESSDIIILDDNFATAV 642 (881)
Q Consensus 587 ~l~~~-g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~--~-~~-a~~~ad~vl~~~~~~~i~ 642 (881)
.+.-. .+.++++||+.+|+.+-+.||+.. ++. .+ . +. ....+|+++.+ +..+.
T Consensus 157 ~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~ 216 (220)
T TIGR03351 157 LTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLP 216 (220)
T ss_pred HcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHH
Confidence 33322 367999999999999999999986 332 22 1 12 23357777643 44444
No 107
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.96 E-value=0.0034 Score=66.66 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+... ++.. +....+ ..+-.|+-=...++.+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-Fd~i--------i~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-FSVV--------LAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-CcEE--------EecccCCCCCCCHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999999998641 1100 000000 11222332234444444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHHHhhcCeeecc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a~~~ad~vl~~ 635 (881)
-....+++|||+.+|+.+-+.||+- |++.+.........+|+++.+
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 4456799999999999999999984 344323333333457887654
No 108
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.92 E-value=0.0014 Score=66.60 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=66.2
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+... ++.. +....+..+-.|+--..+++.+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-f~~~--------~~~~~~~~KP~p~~~~~~~~~~ 174 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL-FPVQ--------IWMEDCPPKPNPEPLILAAKAL 174 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh-CCEE--------EeecCCCCCcCHHHHHHHHHHh
Confidence 345677789999999999999999999999999999999998641 1100 0000011133444445555555
Q ss_pred hhcCCEEEEEcCCccCHHHHHhC
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEA 611 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A 611 (881)
.-....+++|||+.+|+.+-+.|
T Consensus 175 ~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 175 GVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCcccEEEEeCCHHHHHHHHhC
Confidence 55567899999999999887654
No 109
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.89 E-value=0.0022 Score=69.94 Aligned_cols=107 Identities=11% Similarity=-0.032 Sum_probs=75.4
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHH-HHhhheeeeccCHHHHHHHHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKME-KVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~v~~~~~p~~K~~~v~ 586 (881)
..+++.+++.+.+++|++.|++++++||++...+..+.+.+|+....++......... .+... ---+-.|+-+...++
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~-~~~kp~p~~~~~~l~ 262 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQ-GDKRPDDVVKEEIFW 262 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccC-CCCCCcHHHHHHHHH
Confidence 5678999999999999999999999999999999999999888741111100000000 00000 012444666777776
Q ss_pred HHhh-cCCEEEEEcCCccCHHHHHhCCccE
Q 043535 587 CLKL-KGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 587 ~l~~-~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
.+.. ....++|+||..+|+.+-+.||+-.
T Consensus 263 ~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 263 EKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 6543 3478999999999999999999874
No 110
>PRK06769 hypothetical protein; Validated
Probab=96.82 E-value=0.0041 Score=61.75 Aligned_cols=98 Identities=14% Similarity=-0.009 Sum_probs=59.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF--------TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
+.|++.+++++|++.|+++.++|+.... .+....+..|+... +..... ..+..-..+-.|+-=.+
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~------~~~~~~~~KP~p~~~~~ 101 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHK------HGDGCECRKPSTGMLLQ 101 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCC------CCCCCCCCCCCHHHHHH
Confidence 6899999999999999999999987641 23333455666530 000000 00000001122222234
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+++.+....+.+++|||+.+|+.+-+.|++-..
T Consensus 102 ~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 102 AAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 444444334679999999999999999998533
No 111
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.80 E-value=0.0079 Score=64.40 Aligned_cols=90 Identities=12% Similarity=0.022 Sum_probs=62.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~~ 584 (881)
++-|++.+.++.|+++|+++.++||.....+..+.+..|+....+ +..+.+. -.|+-=...
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-------------d~i~~~~~~~~~KP~p~~~~~a 167 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-------------DHVVTTDDVPAGRPYPWMALKN 167 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-------------eEEEcCCcCCCCCCChHHHHHH
Confidence 467999999999999999999999999998888888776643100 0111111 122222233
Q ss_pred HHHHhhc-CCEEEEEcCCccCHHHHHhCCc
Q 043535 585 VKCLKLK-GHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 585 v~~l~~~-g~~v~~iGDg~ND~~~l~~A~v 613 (881)
.+.+.-. .+.++||||+.+|+.+-+.||+
T Consensus 168 ~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 168 AIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 3333322 3569999999999999999998
No 112
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.79 E-value=0.0075 Score=63.98 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=65.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+...-++.. +....+ ..+-.|+-=....+.+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~i--------i~~~~~~~~KP~p~~~~~a~~~l~ 170 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYN--------VTTDDVPAGRPAPWMALKNAIELG 170 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceE--------EccccCCCCCCCHHHHHHHHHHcC
Confidence 468999999999999999999999999999999988888765100000 000000 11122332233334443
Q ss_pred hc-CCEEEEEcCCccCHHHHHhCCcc
Q 043535 590 LK-GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 590 ~~-g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
-. .+.+++|||+.+|+.+-+.||+.
T Consensus 171 ~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 171 VYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CCCchheEEECCcHHHHHHHHHCCCe
Confidence 22 35699999999999999999975
No 113
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.74 E-value=0.0083 Score=56.58 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN--------IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKL 582 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 582 (881)
++.|++.++++.|+++|+++.++|+.. ...+..+.+.+|+... ...... -..+-.|+-=.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-----------~~~KP~~~~~~ 92 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP-----------HCRKPKPGMFL 92 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC-----------CCCCCChHHHH
Confidence 578999999999999999999999998 7788888898888631 000000 00111222223
Q ss_pred HHHHHHh-hcCCEEEEEcC-CccCHHHHHhCCcc
Q 043535 583 AMVKCLK-LKGHVVAVTGN-GIKDAPALEEANVG 614 (881)
Q Consensus 583 ~~v~~l~-~~g~~v~~iGD-g~ND~~~l~~A~vg 614 (881)
.+++.++ -..+.++|||| ..+|+.+-+.+|+-
T Consensus 93 ~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 93 EALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 4444442 34567999999 69999999999874
No 114
>PRK11587 putative phosphatase; Provisional
Probab=96.74 E-value=0.0077 Score=62.31 Aligned_cols=114 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+.++.|+++|+++.++|+.....+...-+..|+... ... ..+.. -..+-.|+-=....+.+.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~--~~i~~~~~~--------~~~KP~p~~~~~~~~~~g 152 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP--EVFVTAERV--------KRGKPEPDAYLLGAQLLG 152 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc--cEEEEHHHh--------cCCCCCcHHHHHHHHHcC
Confidence 4789999999999999999999999987777776677777421 100 00000 011122222233334444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc-HHHHhhcCeeecc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT-AVAKESSDIIILD 635 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~-~~a~~~ad~vl~~ 635 (881)
-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|+++.+
T Consensus 153 ~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 153 LAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred CCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 4457899999999999999999984 5665 332 2233457777654
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.63 E-value=0.012 Score=65.17 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.||+.+.++.|+++|+++.++|+.....+..+.+..|+... ++. .+.+ .-.|+-=...
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-Fd~-------------Iv~sddv~~~KP~Peifl~A 281 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-FSV-------------IVAAEDVYRGKPDPEMFIYA 281 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-ceE-------------EEecCcCCCCCCCHHHHHHH
Confidence 4679999999999999999999999999999999999998651 110 0111 1123333344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcHHH-HhhcCeeecc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTAVA-KESSDIIILD 635 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~~a-~~~ad~vl~~ 635 (881)
++.+.-....++|+||+.+|+.+-+.||+- |++. .+.+.. ...||+++.+
T Consensus 282 ~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 282 AQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC
Confidence 455554567899999999999999999995 3443 332222 2347887754
No 116
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.56 E-value=0.0093 Score=69.13 Aligned_cols=123 Identities=12% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+... ++.. +....+-....|+--...++.+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~-f~~i--------~~~d~v~~~~kP~~~~~al~~l-- 398 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW-VTET--------FSIEQINSLNKSDLVKSILNKY-- 398 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh-ccee--------EecCCCCCCCCcHHHHHHHHhc--
Confidence 5789999999999999999999999999999999999998641 1110 0000000112232111222222
Q ss_pred cCCEEEEEcCCccCHHHHHhCCcc-EeeCC-CCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 591 KGHVVAVTGNGIKDAPALEEANVG-LSMGI-QGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
..+.++++||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+.+.
T Consensus 399 ~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 399 DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 245799999999999999999984 44431 122222345888875 4666665553
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.52 E-value=0.0093 Score=61.72 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=66.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee----ccCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA----RASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~----~~~p--~~K~~~ 584 (881)
++.|++.++++.|+++|++++++|+-+...+....+.+|+... ++ . .+.+ +..| +-=..+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f~------------~-i~~~~~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF-FD------------A-VITSEEEGVEKPHPKIFYAA 159 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh-cc------------E-EEEeccCCCCCCCHHHHHHH
Confidence 5789999999999999999999999998888888888888641 11 0 0111 1122 222233
Q ss_pred HHHHhhcCCEEEEEcCCc-cCHHHHHhCCcc-EeeC
Q 043535 585 VKCLKLKGHVVAVTGNGI-KDAPALEEANVG-LSMG 618 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~ 618 (881)
.+.+.-....+++|||+. +|+.+-+.||+- |.+.
T Consensus 160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333333346799999998 999999999984 5554
No 118
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.51 E-value=0.0099 Score=60.41 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+... ++.. +....+ ..+-.|+-=..+.+.+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-fd~i--------~~s~~~~~~KP~~~~~~~~~~~~~ 162 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-FDAV--------LSADAVRAYKPAPQVYQLALEALG 162 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-hhee--------EehhhcCCCCCCHHHHHHHHHHhC
Confidence 4789999999999999999999999999999999999998541 1110 000000 01112221123334444
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
-..+.+++|||+.+|+.+-+.||+-.
T Consensus 163 ~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 163 VPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred CChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 34567899999999999999999863
No 119
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.45 E-value=0.022 Score=57.02 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=69.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheee--
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVM-- 573 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~-- 573 (881)
.+.|++.+++++|+++|+++.++|..+. .....+.+..|+... .++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-----------------~i~~~ 91 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-----------------GIYYC 91 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-----------------eEEEC
Confidence 3689999999999999999999998763 112223334444210 011
Q ss_pred ----------eccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCcH---HHHhhc--CeeeccCC
Q 043535 574 ----------ARASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGTA---VAKESS--DIIILDDN 637 (881)
Q Consensus 574 ----------~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~~---~a~~~a--d~vl~~~~ 637 (881)
.+-.|+--..+.+.+.-..+.++||||+.+|+.+-+.||+. |.+. .+.. .....+ |+++.+
T Consensus 92 ~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~-- 168 (181)
T PRK08942 92 PHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS-- 168 (181)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--
Confidence 11223333344444444457899999999999999999985 3332 2211 122235 777643
Q ss_pred chHHHHHH
Q 043535 638 FATAVTLL 645 (881)
Q Consensus 638 ~~~i~~~i 645 (881)
+..+.+.+
T Consensus 169 l~el~~~l 176 (181)
T PRK08942 169 LADLPQAL 176 (181)
T ss_pred HHHHHHHH
Confidence 55555444
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.33 E-value=0.017 Score=57.00 Aligned_cols=112 Identities=7% Similarity=-0.033 Sum_probs=72.8
Q ss_pred eeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 502 LLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGD-NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 502 ~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
......-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+.... ... .+.+.+. ..+.++..+..
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~-~~~---~~~~~Fd-~iv~~~~~~~~ 110 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG-KTV---PMHSLFD-DRIEIYKPNKA 110 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC-Ccc---cHHHhce-eeeeccCCchH
Confidence 44444555678899999999999999999999987 888999999999985100 000 0000111 11222221112
Q ss_pred H--HHHHHHHhhc------CCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 581 K--LAMVKCLKLK------GHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 581 K--~~~v~~l~~~------g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
| ..+.+.+.+. .+.++|+||+..|+.+-+.|++-+..-
T Consensus 111 kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 111 KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 2 2344544432 357999999999999999999976543
No 121
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.33 E-value=0.0084 Score=57.69 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CCchhhhcCCHHH-HHHHHhhheeeeccC--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG----ILKPEFRNYTEEE-KMEKVEKIYVMARAS--PDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~-~~~~~~~~~v~~~~~--p~~K~~ 583 (881)
.++|+-++.++.+++++++++++|+....-...+-+..+ +...+ -.+.+. +...-+...++..-+ ..+|..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~id--i~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCID--IVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeE--EeecCceEcCCCceeeecCCccccCCCcch
Confidence 479999999999999999999999988877777777665 22110 000000 000000000111112 247999
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
.|+.+++..+.+.++|||+.|++|-+.+|+=.|=
T Consensus 151 vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 151 VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred hHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999999999999999999999999999887753
No 122
>PLN02580 trehalose-phosphatase
Probab=96.22 E-value=0.029 Score=62.22 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhc-C-----C-EEEEEcCCccCHHHHHh-----CCccEeeCCCCcHHHHhhcCeeeccCCchHHHHHHH
Q 043535 580 DKLAMVKCLKLK-G-----H-VVAVTGNGIKDAPALEE-----ANVGLSMGIQGTAVAKESSDIIILDDNFATAVTLLN 646 (881)
Q Consensus 580 ~K~~~v~~l~~~-g-----~-~v~~iGDg~ND~~~l~~-----A~vgIam~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 646 (881)
+|+..++.+.++ | . .++++||+.||..||+. +++||+|+ ++.... .|++.+.+ ...+...+.
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCCc--cceEEcCC--HHHHHHHHH
Confidence 788888887765 2 1 24899999999999996 69999998 654422 57887764 555665553
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.20 E-value=0.011 Score=61.35 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec----cCH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR----ASP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~----~~p--~~K~~~ 584 (881)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.. .++ ..+.+. ..| +-=..+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd-------------~iv~s~~~~~~KP~p~~~~~~ 158 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLD-------------LLLSTHTFGYPKEDQRLWQAV 158 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCC-------------EEEEeeeCCCCCCCHHHHHHH
Confidence 578999999999999999999999999888888888888754 111 011111 122 111222
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc--EeeC
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG--LSMG 618 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg--Iam~ 618 (881)
.+.+.-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 159 ~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 159 AEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 233333345799999999999999999996 4444
No 124
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.12 E-value=0.016 Score=71.36 Aligned_cols=50 Identities=8% Similarity=0.029 Sum_probs=37.4
Q ss_pred CceeeeeccccCCCCccHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHHc
Q 043535 499 NLILLGLLGIKDPCRPGLKKAVEDC-QYAGVNIKMITGDNIFTAKAIATQC 548 (881)
Q Consensus 499 ~l~~lG~i~~~D~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~~a~~ia~~~ 548 (881)
|.+++-.....-.+.++..+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 4444433222335678999999997 7889999999999999998877543
No 125
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.07 E-value=0.024 Score=61.25 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=72.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
++.|++.+.++.|++.|+++.++|+.+......+-+..+.... .+.....++ .-..+-.|+-=..+.+.+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~--------~~~~KP~p~~~~~a~~~~ 215 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD--------VPKKKPDPDIYNLAAETL 215 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc--------cCCCCCCHHHHHHHHHHh
Confidence 5789999999999999999999999998888877665532110 000000000 001122232333444444
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccEeeCCCCc--HHHHhhcCeeecc
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGLSMGIQGT--AVAKESSDIIILD 635 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~--~~a~~~ad~vl~~ 635 (881)
.-....+++|||+.+|+.+-+.||+.......+. ......+|+++.+
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 4445679999999999999999998644321321 1112357888754
No 126
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.06 E-value=0.02 Score=56.70 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCH--HHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN-IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASP--DDKLAMVKC 587 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~ 587 (881)
.+.+++.+++++|++.|++++++|+.+ ...+..+.+.+|+.. .+....| +-=..+.+.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------------------~~~~~KP~p~~~~~~l~~ 103 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------------------LPHAVKPPGCAFRRAHPE 103 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------EcCCCCCChHHHHHHHHH
Confidence 578999999999999999999999988 677788888888753 1111223 222223333
Q ss_pred HhhcCCEEEEEcCCc-cCHHHHHhCCcc
Q 043535 588 LKLKGHVVAVTGNGI-KDAPALEEANVG 614 (881)
Q Consensus 588 l~~~g~~v~~iGDg~-ND~~~l~~A~vg 614 (881)
+.-....++||||.. .|+.+-+.||+-
T Consensus 104 ~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 104 MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 333345699999998 799999999984
No 127
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.05 E-value=0.012 Score=58.87 Aligned_cols=87 Identities=15% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----ccCHHH--HHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----RASPDD--KLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----~~~p~~--K~~ 583 (881)
++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+... ++. +++ +..|.. =..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~-f~~--------------v~~~~~~~~~kp~~~~~~~ 150 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY-FDA--------------IVDADEVKEGKPHPETFLL 150 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH-CCE--------------eeehhhCCCCCCChHHHHH
Confidence 68999999999999999999999987 567778888887541 111 111 112221 112
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
+.+.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 151 ~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 151 AAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 2222222245688999999999999999885
No 128
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.93 E-value=0.013 Score=58.64 Aligned_cols=93 Identities=16% Similarity=0.238 Sum_probs=59.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCC-HHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYT-EEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. .++..- .++ .-..+-.|+-=..+.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~-~f~~~~~~~~--------~~~~kp~p~~~~~~~~~~~ 155 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLID-YFDAIVDPAE--------IKKGKPDPEIFLAAAEGLG 155 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHh-hCcEEEehhh--------cCCCCCChHHHHHHHHHcC
Confidence 5789999999999999999999997643 456678888754 111100 000 0011112222122333333
Q ss_pred hcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 590 LKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
-....+++|||+.+|+.+-+.||+-
T Consensus 156 ~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 156 VSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2345689999999999999999985
No 129
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.89 E-value=0.013 Score=57.71 Aligned_cols=92 Identities=15% Similarity=0.254 Sum_probs=68.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~ 583 (881)
.++.|++.+.+++|+++|++++++|+.+........+++|+... ++. .+.+. -.|+-=..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f~~-------------i~~~~~~~~~Kp~~~~~~~ 141 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-FDE-------------IISSDDVGSRKPDPDAYRR 141 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-CSE-------------EEEGGGSSSSTTSHHHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-ccc-------------ccccchhhhhhhHHHHHHH
Confidence 35789999999999999999999999999999999999998731 110 01111 11222334
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 142 ~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 142 ALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 44444444677999999999999999998753
No 130
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.85 E-value=0.038 Score=55.06 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.+++|+++|++++++|+..... ..+..++|+... ++. .+++ +-.|+--..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f~~-------------i~~~~~~~~~KP~~~~~~~~ 149 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-FDV-------------VIFSGDVGRGKPDPDIYLLA 149 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-CCE-------------EEEcCCCCCCCCCHHHHHHH
Confidence 578999999999999999999999988887 566556887531 111 1111 1222223344
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
.+.+.-....++++||...|+.+-+.+|+-
T Consensus 150 ~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 150 LKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 444444467899999999999999999873
No 131
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.84 E-value=0.027 Score=54.24 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNI---------------FTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
++.|++.++++.|+++|+++.++|..+. ..+..+.+.+|+.... ..++.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------------~~~~~ 90 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----------------VLFCP 90 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----------------EEECC
Confidence 4789999999999999999999998762 4556677788875200 01110
Q ss_pred c-------CHHHHHHHHHH-Hhh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 576 A-------SPDDKLAMVKC-LKL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 576 ~-------~p~~K~~~v~~-l~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
. ...-+.++... +++ ..+.+++|||...|+.+-+.+++-..
T Consensus 91 ~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 91 HHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0 01112223222 222 34579999999999999999988543
No 132
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.67 E-value=0.041 Score=58.22 Aligned_cols=86 Identities=10% Similarity=0.103 Sum_probs=61.2
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
..++-|++.+.++.+++.|+++.++|++... .+....++.|+.....+ .++.|-....|..-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------~lllr~~~~~K~~rr 181 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------HLLLKKDKSSKESRR 181 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------eEEeCCCCCCcHHHH
Confidence 4457899999999999999999999999744 34456677888641111 144443334566666
Q ss_pred HHHhhcCCEEEEEcCCccCHHHH
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPAL 608 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l 608 (881)
+.+.+.-.+++++||..+|....
T Consensus 182 ~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 182 QKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred HHHHhcCCEEEEECCCHHHhhhh
Confidence 66666556799999999998654
No 133
>PRK09449 dUMP phosphatase; Provisional
Probab=95.66 E-value=0.053 Score=56.23 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=74.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc----CH--HHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA----SP--DDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~----~p--~~K~~~ 584 (881)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+.. .++ ..+.+.. .| +-=..+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd-------------~v~~~~~~~~~KP~p~~~~~~ 159 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRD-YFD-------------LLVISEQVGVAKPDVAIFDYA 159 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHH-HcC-------------EEEEECccCCCCCCHHHHHHH
Confidence 47899999999999 689999999999888888888888753 111 1122221 22 222233
Q ss_pred HHHHhhc-CCEEEEEcCCc-cCHHHHHhCCcc-EeeCCCCcH-HHHhhcCeeeccCCchHHHHHH
Q 043535 585 VKCLKLK-GHVVAVTGNGI-KDAPALEEANVG-LSMGIQGTA-VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 585 v~~l~~~-g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~~~~~-~a~~~ad~vl~~~~~~~i~~~i 645 (881)
++.+.-. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++.+ +..+.+++
T Consensus 160 ~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 160 LEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 3333322 25799999998 799999999985 444311211 111246777753 55555443
No 134
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.58 E-value=0.037 Score=57.27 Aligned_cols=114 Identities=13% Similarity=0.105 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~K~~ 583 (881)
++.|++.+.+++|+++ +++.++|+-....+..+.+++|+... ++ .+++ +-.|+-=..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~-fd--------------~i~~~~~~~~~KP~~~~~~~ 160 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF-FD--------------DIFVSEDAGIQKPDKEIFNY 160 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh-cC--------------EEEEcCccCCCCCCHHHHHH
Confidence 5789999999999999 99999999999999999999998641 11 0221 112222233
Q ss_pred HHHHH-hhcCCEEEEEcCCc-cCHHHHHhCCcc-EeeCC-CCcHHHHhhcCeeeccCCchHHH
Q 043535 584 MVKCL-KLKGHVVAVTGNGI-KDAPALEEANVG-LSMGI-QGTAVAKESSDIIILDDNFATAV 642 (881)
Q Consensus 584 ~v~~l-~~~g~~v~~iGDg~-ND~~~l~~A~vg-Iam~~-~~~~~a~~~ad~vl~~~~~~~i~ 642 (881)
.++.+ .-....+++|||+. +|+.+-+.+|+- |.... ...+.....+|+++. ++..+.
T Consensus 161 ~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 221 (224)
T TIGR02254 161 ALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELY 221 (224)
T ss_pred HHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHH
Confidence 34444 32345799999998 899999999974 33321 111122234566654 344443
No 135
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.57 E-value=0.058 Score=53.72 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=63.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHcCCCchhhhcCC--HHHHHHHHhhheeee
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF---------------TAKAIATQCGILKPEFRNYT--EEEKMEKVEKIYVMA 574 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~v~~ 574 (881)
+.|++.+++++|+++|+++.++|.-+.. ....+..+.|+.-..+-... .... .......-..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ 105 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV-EEFRQVCDCR 105 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc-ccccCCCCCC
Confidence 5789999999999999999999977631 11122223332210000000 0000 0000000001
Q ss_pred ccCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccE--eeCCCCcH---HHHhhcCeeecc
Q 043535 575 RASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL--SMGIQGTA---VAKESSDIIILD 635 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI--am~~~~~~---~a~~~ad~vl~~ 635 (881)
+-.|+-=....+.+.-....++||||..+|+.+-+.|++.. .+. .+.. .....+|+++.+
T Consensus 106 KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred CCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 11222222333333333567889999999999999999853 433 2221 122348888753
No 136
>PLN02940 riboflavin kinase
Probab=95.56 E-value=0.038 Score=62.19 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=72.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT-QCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l 588 (881)
++.|++.+.+++|++.|+++.++|+.....+....+ ..|+.. .++.. +....+ ..+-.|+-=..+++.+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~i--------i~~d~v~~~KP~p~~~~~a~~~l 163 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVI--------VGGDEVEKGKPSPDIFLEAAKRL 163 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEE--------EehhhcCCCCCCHHHHHHHHHHc
Confidence 467999999999999999999999999888877665 567643 11100 000000 1112233333444444
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCCc--HHHHhhcCeeec
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQGT--AVAKESSDIIIL 634 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~~--~~a~~~ad~vl~ 634 (881)
.-..+.+++|||+.+|+.+-+.||+. |++. .+. ......+|.++.
T Consensus 164 gv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 164 NVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVIN 211 (382)
T ss_pred CCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeC
Confidence 44456799999999999999999986 4443 322 222334666554
No 137
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.42 E-value=0.036 Score=54.27 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDN---------------IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA- 574 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~- 574 (881)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.- +. .+++
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~-------------ii~~~ 92 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---DD-------------VLICP 92 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---eE-------------EEECC
Confidence 467899999999999999999999752 345566677777751 10 0122
Q ss_pred ----ccCH--HHHHHHHHHHh-hc---CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 575 ----RASP--DDKLAMVKCLK-LK---GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 575 ----~~~p--~~K~~~v~~l~-~~---g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
.... .-|..++..+. +. ...+.||||+.+|+.+-+.|++...
T Consensus 93 ~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 93 HFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 1100 11223333332 22 3569999999999999999999644
No 138
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.36 E-value=0.05 Score=52.03 Aligned_cols=110 Identities=14% Similarity=0.186 Sum_probs=77.7
Q ss_pred HHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC
Q 043535 470 IQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 470 ~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g 549 (881)
.+.+..+|.+.+.+-. |-+++..= ..+..|++.+=+++++++|++++++|..+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~Dl-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDL-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEec-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 4567777877766542 22333221 23567889999999999999999999999999999999999
Q ss_pred CCchhhhcCCHHHHHHHHhhheeeeccCHHHH--HHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCc
Q 043535 550 ILKPEFRNYTEEEKMEKVEKIYVMARASPDDK--LAMVKCLKLKGHVVAVTGNG-IKDAPALEEANV 613 (881)
Q Consensus 550 i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~g~~v~~iGDg-~ND~~~l~~A~v 613 (881)
++. ++--..|-.+ .+.++.++-..+.|+||||- ..|+-+=..||+
T Consensus 85 v~f-------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF-------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce-------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 986 5444455443 24444444456789999997 457666555555
No 139
>PLN03017 trehalose-phosphatase
Probab=95.23 E-value=0.25 Score=54.41 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=37.1
Q ss_pred CceeeeeccccC--CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 043535 499 NLILLGLLGIKD--PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA 545 (881)
Q Consensus 499 ~l~~lG~i~~~D--~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia 545 (881)
|.+++-++.-.| .+.++..++|++|. +|++++++|||....+..+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 556665554333 47899999999999 78999999999999998874
No 140
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.17 E-value=0.084 Score=54.66 Aligned_cols=102 Identities=22% Similarity=0.326 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-------CCHHHHHH-HHhhheeeeccCH-H
Q 043535 511 PCRPGLKKAVEDC--QYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-------YTEEEKME-KVEKIYVMARASP-D 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l--~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-------~~~~~~~~-~~~~~~v~~~~~p-~ 579 (881)
|+.|+..+.++.+ ++.|+.+.++|--+..--..+-+.-|+... +.+ ..+..... ......-+.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~-f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC-FSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc-cceEEeCCceecCCceEEEeCccCCCCCcCCCcc
Confidence 5788999999999 568999999999999999999999998652 100 00000000 0000012233333 3
Q ss_pred HHHHHHHHHhhc----C---CEEEEEcCCccCHH-HHH--hCCc
Q 043535 580 DKLAMVKCLKLK----G---HVVAVTGNGIKDAP-ALE--EANV 613 (881)
Q Consensus 580 ~K~~~v~~l~~~----g---~~v~~iGDg~ND~~-~l~--~A~v 613 (881)
=|..+++.+++. | .+|.+||||.||.. +++ .+|+
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~ 193 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDV 193 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCE
Confidence 589999888765 4 68999999999954 433 4554
No 141
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.15 E-value=0.025 Score=54.84 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=56.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
...+++.+.++.|+++|+++.++|+.....+....+.. +.. .+... .....+..+-.|+-=..+.+.+.-
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~-~f~~i--------~~~~~~~~Kp~~~~~~~~~~~~~~ 133 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD-YFDLI--------LGSDEFGAKPEPEIFLAALESLGL 133 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh-cCcEE--------EecCCCCCCcCHHHHHHHHHHcCC
Confidence 34578999999999999999999999999988877764 322 00000 000001111122222222233322
Q ss_pred cCCEEEEEcCCccCHHHHHhCC
Q 043535 591 KGHVVAVTGNGIKDAPALEEAN 612 (881)
Q Consensus 591 ~g~~v~~iGDg~ND~~~l~~A~ 612 (881)
.. .+++|||+.+|+.+-+.||
T Consensus 134 ~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 134 PP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CC-CEEEEeCCHHHHHHHHHcc
Confidence 24 7899999999999988775
No 142
>PLN02423 phosphomannomutase
Probab=95.09 E-value=0.082 Score=55.70 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhcCCEEEEEcC----CccCHHHHHh-CCccEeeC
Q 043535 580 DKLAMVKCLKLKGHVVAVTGN----GIKDAPALEE-ANVGLSMG 618 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGD----g~ND~~~l~~-A~vgIam~ 618 (881)
+|+..++.|+ ..+.|+++|| |.||.+||+. --.|+++.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 6899999999 7778999999 8999999997 55688886
No 143
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.03 E-value=0.065 Score=54.62 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++-|++.++++.|+++|+++.++|+-... .....+.+|+... ++.. +....+ ..+-.|+-=..+++.+.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-fd~i--------~~s~~~~~~KP~~~~~~~~~~~~~ 174 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-FDFV--------VTSYEVGAEKPDPKIFQEALERAG 174 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-cceE--------EeecccCCCCCCHHHHHHHHHHcC
Confidence 57899999999999999999999986654 4667777887531 1100 000000 01112221122333333
Q ss_pred hcCCEEEEEcCCc-cCHHHHHhCCcc
Q 043535 590 LKGHVVAVTGNGI-KDAPALEEANVG 614 (881)
Q Consensus 590 ~~g~~v~~iGDg~-ND~~~l~~A~vg 614 (881)
-....+++|||+. +|+.+-+.||+-
T Consensus 175 ~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 175 ISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred CChhHEEEECCCchHHHHHHHHcCCe
Confidence 3356799999997 899998888864
No 144
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.97 E-value=0.017 Score=55.69 Aligned_cols=92 Identities=16% Similarity=0.029 Sum_probs=64.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec-cCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR-ASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~-~~p~~K~~~v~~l 588 (881)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+...-+. .++++ .....|-.+.+.+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~--------------~i~~~~d~~~~KP~~~k~l 108 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY--------------RRLFRDECVFVKGKYVKDL 108 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee--------------eEEECccccccCCeEeecH
Confidence 357999999999999 5799999999999999999999887531001 02222 1111222244444
Q ss_pred hh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 589 KL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 589 ~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+. ..+.+++|||..+|..+-+.+++-|.
T Consensus 109 ~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 109 SLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred HHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 43 35689999999999999777766654
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.87 E-value=0.12 Score=53.25 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=57.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-H------H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFT---AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS-P------D 579 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~-p------~ 579 (881)
-+.-|++.+.++.++++|++|+++|||.... +..-.++.|++.. + .++-|.. . .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~--------------~LiLR~~~d~~~~~~~ 182 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--K--------------HLILRGLEDSNKTVVT 182 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--C--------------eeeecCCCCCCchHhH
Confidence 4788999999999999999999999999755 3344456777641 0 1333321 1 1
Q ss_pred HHHHHHHHHhhcCCE-EEEEcCCccCH
Q 043535 580 DKLAMVKCLKLKGHV-VAVTGNGIKDA 605 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~-v~~iGDg~ND~ 605 (881)
-|.+.-+.+.+.|++ ++.+||-.+|.
T Consensus 183 yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 183 YKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred HHHHHHHHHHhCCceEEEEECCChHHh
Confidence 277777777777765 56689998886
No 146
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.85 E-value=0.077 Score=54.72 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=65.7
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCG---ILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMV 585 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 585 (881)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +.. .++. .+ ...+...-.|+-=..+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~~--------~f-d~~~g~KP~p~~y~~i~ 162 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFSG--------YF-DTTVGLKTEAQSYVKIA 162 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcce--------EE-EeCcccCCCHHHHHHHH
Confidence 44689999999999999999999999998887777666542 221 0110 00 01112222333333444
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 586 KCLKLKGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 586 ~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+.+.-..+.++++||...|+.+-++||+-..
T Consensus 163 ~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 163 GQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 4444445679999999999999999999643
No 147
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.81 E-value=0.26 Score=51.79 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=61.8
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAK--AIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK 581 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 581 (881)
|.+.-.+.+-|++.+++++|+++|+++.++|......+. ...+++|+..+.++. +++.. ....
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~--------------Ii~s~-~~~~ 81 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEM--------------IISSG-EIAV 81 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccce--------------EEccH-HHHH
Confidence 555667788999999999999999999999986655444 567888886411111 22111 1111
Q ss_pred HHHHHHHhh---cCCEEEEEcCCccCHHHHHhCCc
Q 043535 582 LAMVKCLKL---KGHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 582 ~~~v~~l~~---~g~~v~~iGDg~ND~~~l~~A~v 613 (881)
..+.+.+++ .+..+.++||+.+|...+..++.
T Consensus 82 ~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 82 QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 122222232 24679999999999988865443
No 148
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.72 E-value=0.089 Score=49.34 Aligned_cols=86 Identities=7% Similarity=0.098 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC-------CCchhhhcCCHHHHHHHHhhheeeeccCHHHH-
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD-NIFTAKAIATQCG-------ILKPEFRNYTEEEKMEKVEKIYVMARASPDDK- 581 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 581 (881)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..| +.. .+. ..+..+..|.-+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~-------------~f~-~~~~~~~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAE-------------YFD-PLTIGYWLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHh-------------hhh-hhhhcCCCcHHHH
Confidence 68999999999999999999999999 7877777777776 211 010 001222223222
Q ss_pred -HHHHHHHh--hcCCEEEEEcCCccCHHHHHh
Q 043535 582 -LAMVKCLK--LKGHVVAVTGNGIKDAPALEE 610 (881)
Q Consensus 582 -~~~v~~l~--~~g~~v~~iGDg~ND~~~l~~ 610 (881)
..+++.+. -..+.++|+||...|...++.
T Consensus 95 ~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 95 LVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 23333333 334789999999999877654
No 149
>PLN02811 hydrolase
Probab=94.69 E-value=0.11 Score=53.82 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCCchhhhcCCHHHHHHHHhhheeeec--------cCHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA-IATQCGILKPEFRNYTEEEKMEKVEKIYVMAR--------ASPDDK 581 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~--------~~p~~K 581 (881)
++.|++.+.|+.|+++|+++.++||-....... ..+..++.. ... ..+.+. -.|+-=
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-------------~f~-~i~~~~~~~~~~~KP~p~~~ 143 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-------------LMH-HVVTGDDPEVKQGKPAPDIF 143 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-------------hCC-EEEECChhhccCCCCCcHHH
Confidence 468999999999999999999999987654432 221122221 010 112222 122222
Q ss_pred HHHHHHHh---hcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 582 LAMVKCLK---LKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 582 ~~~v~~l~---~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
...++.+. -..+.+++|||+..|+.+-+.||+..
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 33344443 22467999999999999999999963
No 150
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.40 E-value=0.12 Score=65.73 Aligned_cols=124 Identities=18% Similarity=0.248 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
.+.|++.+.++.|+++|+++.++|+.....+....++.|+....++. .+.+ +-.|+-=...
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~-------------iv~~~~~~~~KP~Pe~~~~a 227 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA-------------IVSADAFENLKPAPDIFLAA 227 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE-------------EEECcccccCCCCHHHHHHH
Confidence 35799999999999999999999999999999999999986211111 0111 1122222334
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeCCCC---cHHHHhhcCeeeccCCchHHHHHHHHh
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMGIQG---TAVAKESSDIIILDDNFATAVTLLNWG 648 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~~~~---~~~a~~~ad~vl~~~~~~~i~~~i~~g 648 (881)
++.+.-..+.+++|||..+|+.+-+.|++- |++. .+ .+.....+|+++.+-..-.+..++..|
T Consensus 228 ~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 228 AKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 444444456799999999999999999984 4443 22 223344678887664443444444433
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.32 E-value=0.14 Score=50.35 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeecc---
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIF------------TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARA--- 576 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~--- 576 (881)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+... ..+.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~----------------~ii~~~~~~~ 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQ----------------VLAATHAGLY 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEE----------------EEEecCCCCC
Confidence 3489999999999999999999975542 45667788887531 0111111
Q ss_pred -CH--HHHHHHHHHHh--hcCCEEEEEcCCc--------cCHHHHHhCCccE
Q 043535 577 -SP--DDKLAMVKCLK--LKGHVVAVTGNGI--------KDAPALEEANVGL 615 (881)
Q Consensus 577 -~p--~~K~~~v~~l~--~~g~~v~~iGDg~--------ND~~~l~~A~vgI 615 (881)
.| +-=..+.+.+. -..+.++||||.. +|+.+-+.||+-.
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 12 11122333332 1235799999986 6999988888754
No 152
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.99 E-value=0.14 Score=45.73 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=55.5
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA---IATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+++-|++.++|++|+++|++++++|.....+... -.+++|+.... + .++. |.+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-~--------------~i~t---s~~ 68 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-D--------------EIIT---SGM 68 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G-G--------------GEEE---HHH
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc-C--------------EEEC---hHH
Confidence 6677788899999999999999999999999876444333 33678876421 0 1232 211
Q ss_pred HHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCc
Q 043535 581 KLAMVKCLKL--KGHVVAVTGNGIKDAPALEEANV 613 (881)
Q Consensus 581 K~~~v~~l~~--~g~~v~~iGDg~ND~~~l~~A~v 613 (881)
...+.+++ .+..|.++|.. .....++.+|+
T Consensus 69 --~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 69 --AAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --HHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred --HHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22334444 47789998876 55566666653
No 153
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.95 E-value=0.51 Score=50.09 Aligned_cols=49 Identities=24% Similarity=0.304 Sum_probs=38.5
Q ss_pred eeccccCC----CCccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCCc
Q 043535 504 GLLGIKDP----CRPGLKKAVEDCQYAGVNIKMITGDNIFT---AKAIATQCGILK 552 (881)
Q Consensus 504 G~i~~~D~----~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~---a~~ia~~~gi~~ 552 (881)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 45555555 88999999999999999999999976554 555566778754
No 154
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.90 E-value=0.14 Score=56.25 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=68.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ----CGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
++.+++.+++++|+++|+++.++|.-+...+..+.++ +|+.. .+ ......++-|.+.++
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~-~f----------------~~~~~~~~pk~~~i~ 93 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAE-DF----------------DARSINWGPKSESLR 93 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHH-He----------------eEEEEecCchHHHHH
Confidence 4578999999999999999999999999999999888 77653 11 111122334544444
Q ss_pred HHhh----cCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 587 CLKL----KGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 587 ~l~~----~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
...+ ....++|+||...|+.+.+.+...+.+-
T Consensus 94 ~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 94 KIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred HHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 4433 3468999999999999999988887554
No 155
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.81 E-value=0.19 Score=55.44 Aligned_cols=90 Identities=20% Similarity=0.145 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGD---------------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
++.|++.+++++|+++|+++.++|+- ....+..+.+..|+.... .+++-
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~----------------i~i~~ 93 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDE----------------VLICP 93 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceee----------------EEEeC
Confidence 57899999999999999999999983 233455566666664200 01110
Q ss_pred -----c--CHHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 576 -----A--SPDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 576 -----~--~p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
. ...-|..++....+. ...+.||||+.+|..+-+.|++-..
T Consensus 94 ~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 94 HFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred CcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 001123334333222 4689999999999999999999643
No 156
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.71 E-value=0.081 Score=55.73 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=48.5
Q ss_pred eccCHHHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhC--------CccEeeCCCCcHHHHhhcCeeeccCCchHH
Q 043535 574 ARASPDDKLAMVKCLKLK----GHVVAVTGNGIKDAPALEEA--------NVGLSMGIQGTAVAKESSDIIILDDNFATA 641 (881)
Q Consensus 574 ~~~~p~~K~~~v~~l~~~----g~~v~~iGDg~ND~~~l~~A--------~vgIam~~~~~~~a~~~ad~vl~~~~~~~i 641 (881)
.+..+.+|...++.+.+. ...++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++.+ ...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHH
Confidence 334456898888887665 34789999999999999998 5788885 33 245668998874 5555
Q ss_pred HHHH
Q 043535 642 VTLL 645 (881)
Q Consensus 642 ~~~i 645 (881)
.+.+
T Consensus 236 ~~~L 239 (244)
T TIGR00685 236 LEFL 239 (244)
T ss_pred HHHH
Confidence 5444
No 157
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.50 E-value=0.51 Score=49.87 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=42.3
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCCch
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITG---DNIFTAKAIATQCGILKP 553 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TG---d~~~~a~~ia~~~gi~~~ 553 (881)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999995 888888888899998653
No 158
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.39 E-value=0.27 Score=48.07 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=66.8
Q ss_pred cCCCCccHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH
Q 043535 509 KDPCRPGLKKAVEDCQYAGV--NIKMITGD-------NIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD 579 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi--~v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 579 (881)
++++.++..+.+++|++.+. +|+++|-. +...|..+.+.+|+.. ..+....|.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv------------------l~h~~kKP~ 118 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV------------------LRHRAKKPG 118 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE------------------EEeCCCCCc
Confidence 56788999999999999987 49999987 4899999999999874 023345787
Q ss_pred HHHHHHHHHhhc-----CCEEEEEcCC-ccCHHHHHhCC
Q 043535 580 DKLAMVKCLKLK-----GHVVAVTGNG-IKDAPALEEAN 612 (881)
Q Consensus 580 ~K~~~v~~l~~~-----g~~v~~iGDg-~ND~~~l~~A~ 612 (881)
-..++.+.++.+ .+.+++|||= ..|+-|=...|
T Consensus 119 ~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 119 CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 677888888765 6689999996 45666544444
No 159
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.05 E-value=0.55 Score=45.26 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=69.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHc-----CCCchhhhcCCHHHHHHHHhhheeeeccCHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKA---IATQC-----GILKPEFRNYTEEEKMEKVEKIYVMARASPDDK 581 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 581 (881)
|..++++.+..++++++|++++.+|+|+.-.+.. ...+. +++..- -.++++.+...+... +..+-..+.|
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp-v~~sP~~l~~al~rE-vi~~~p~~fK 103 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP-VLLSPDSLFSALHRE-VISKDPEEFK 103 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC-EEECCcchhhhhhcc-ccccChHHHH
Confidence 6899999999999999999999999999665544 33333 443311 111222222222111 3344445689
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCcc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
...++.++.. ...+++.|...+|+.+.+++++-
T Consensus 104 ~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 104 IACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 9999998865 34567789999999999988775
No 160
>PRK10444 UMP phosphatase; Provisional
Probab=93.05 E-value=0.49 Score=49.91 Aligned_cols=48 Identities=19% Similarity=0.281 Sum_probs=41.1
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH---cCCC
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ---CGIL 551 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~---~gi~ 551 (881)
|++.-.+.+-|++.+++++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66666778899999999999999999999999998877777666 5764
No 161
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.84 E-value=0.25 Score=49.39 Aligned_cols=137 Identities=15% Similarity=0.240 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EEEEEcCCCHHHHH
Q 043535 464 ERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NIKMITGDNIFTAK 542 (881)
Q Consensus 464 ~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v~~~TGd~~~~a~ 542 (881)
+...+..+.+.++|.|.--+.. +.=.=|+-|+..++|+.+++.|. .+.++|--|.-...
T Consensus 57 e~M~rv~k~Lheqgv~~~~ik~--------------------~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe 116 (256)
T KOG3120|consen 57 ELMDRVFKELHEQGVRIAEIKQ--------------------VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIE 116 (256)
T ss_pred HHHHHHHHHHHHcCCCHHHHHH--------------------HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHH
Confidence 4556677888888876432221 11112678999999999999997 99999999999999
Q ss_pred HHHHHcCCCchhhhc-C-CHHHHHH------HHh-hheeeeccCHH--HHHHHHHHHhhcC-------CEEEEEcCCccC
Q 043535 543 AIATQCGILKPEFRN-Y-TEEEKME------KVE-KIYVMARASPD--DKLAMVKCLKLKG-------HVVAVTGNGIKD 604 (881)
Q Consensus 543 ~ia~~~gi~~~~~~~-~-~~~~~~~------~~~-~~~v~~~~~p~--~K~~~v~~l~~~g-------~~v~~iGDg~ND 604 (881)
.+.+..|+..- +.+ . ++..+++ ... .-.-+.+ .|. =|..++..++..+ +++.++|||.||
T Consensus 117 ~~Lea~~~~d~-F~~IfTNPa~~da~G~L~v~pyH~~hsC~~-CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD 194 (256)
T KOG3120|consen 117 EILEAAGIHDL-FSEIFTNPACVDASGRLLVRPYHTQHSCNL-CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGAND 194 (256)
T ss_pred HHHHHccHHHH-HHHHhcCCcccCCCCcEEeecCCCCCccCc-CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCC
Confidence 99888887541 000 0 0000000 000 0012233 233 3777776665431 278999999999
Q ss_pred -HHHHHhCCccEeeCCCCc
Q 043535 605 -APALEEANVGLSMGIQGT 622 (881)
Q Consensus 605 -~~~l~~A~vgIam~~~~~ 622 (881)
||+++...--+||-..+-
T Consensus 195 ~CP~l~Lr~~D~ampRkgf 213 (256)
T KOG3120|consen 195 FCPVLRLRACDVAMPRKGF 213 (256)
T ss_pred cCcchhcccCceecccCCC
Confidence 567776666667764443
No 162
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.44 E-value=0.16 Score=52.06 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=57.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-------ccCHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFT--AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-------RASPDD 580 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-------~~~p~~ 580 (881)
-++.|++.+.+++|+++|+++.++|...... ........++.. .+.. +++ +-.|+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~-------------~fd~--v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA-------------LFDA--VVESCLEGLRKPDPRI 157 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh-------------hCCE--EEEeeecCCCCCCHHH
Confidence 3578999999999999999999999875432 222222233321 1111 111 112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc-EeeC
Q 043535 581 KLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG-LSMG 618 (881)
Q Consensus 581 K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg-Iam~ 618 (881)
=..+.+.+.-....+++|||...|+.+-+.||+- |.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 2233333333345688899999999999999995 4443
No 163
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.21 E-value=0.21 Score=51.68 Aligned_cols=91 Identities=10% Similarity=0.118 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee------ccCHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA------RASPDDKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~------~~~p~~K~~~ 584 (881)
++.|++.+.++.| ++++.++|+.....+...-+..|+.. .++ ...+.+ +-.|+-=..+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~-~F~------------~~v~~~~~~~~~KP~p~~~~~a 151 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLH-YFP------------DKLFSGYDIQRWKPDPALMFHA 151 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHH-hCc------------ceEeeHHhcCCCCCChHHHHHH
Confidence 4568999999998 48999999999888888888888864 111 000111 1122222333
Q ss_pred HHHHhhcCCEEEEEcCCccCHHHHHhCCccEee
Q 043535 585 VKCLKLKGHVVAVTGNGIKDAPALEEANVGLSM 617 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam 617 (881)
.+.+.-..+.+++|||+.+|+.+=+.||+.+..
T Consensus 152 ~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 152 AEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 333333345689999999999999999987653
No 164
>PLN02645 phosphoglycolate phosphatase
Probab=91.80 E-value=0.42 Score=52.29 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=60.7
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA---TQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+.+-|++.++|++|+++|++++++|++...+...++ +++|+... .++ ++... .-
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~------~~~---------I~ts~--~~ 99 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT------EEE---------IFSSS--FA 99 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC------hhh---------EeehH--HH
Confidence 666666788899999999999999999999999966666655 56777531 111 22211 11
Q ss_pred HHHHHHHHhh-cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKL-KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~-~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
....++.... .++.|+. ++...|...++.+++-+.
T Consensus 100 ~~~~l~~~~~~~~~~V~v-iG~~~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 100 AAAYLKSINFPKDKKVYV-IGEEGILEELELAGFQYL 135 (311)
T ss_pred HHHHHHhhccCCCCEEEE-EcCHHHHHHHHHCCCEEe
Confidence 1222222211 1345555 455678999998887543
No 165
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=91.15 E-value=0.62 Score=46.53 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeee-----------ccCHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMA-----------RASPD 579 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~-----------~~~p~ 579 (881)
++.+++.+++++|+ .+++++|+.+...+....+.+|+.. .++. +++ +-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~--------------i~~~~~~~~~~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIED-CFDG--------------IFCFDTANPDYLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHh-hhCe--------------EEEeecccCccCCCCCCHH
Confidence 36789999999998 4789999999999999999999854 1110 221 22222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 580 DKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 580 ~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
-=..+++.+......+++|||...|+.+=+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223444445444677899999999999999988754
No 166
>PLN02151 trehalose-phosphatase
Probab=90.94 E-value=1.7 Score=47.95 Aligned_cols=47 Identities=9% Similarity=0.067 Sum_probs=34.6
Q ss_pred CceeeeeccccC--CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 043535 499 NLILLGLLGIKD--PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT 546 (881)
Q Consensus 499 ~l~~lG~i~~~D--~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~ 546 (881)
|.+++-+..--| .+.+++.++|++|. ++..|+++|||+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 445554333333 35678999999999 457999999999998887754
No 167
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.90 E-value=0.59 Score=47.43 Aligned_cols=91 Identities=5% Similarity=0.079 Sum_probs=57.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCchhhhcCCHHHHHHHHhhheeeec------cCHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKPEFRNYTEEEKMEKVEKIYVMAR------ASPDDKLA 583 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~v~~~------~~p~~K~~ 583 (881)
++.|++.+++++|+++|+++.++|.-+.......... .++.. .... .+.+. -.|+-=..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~-------------~fd~-v~~s~~~~~~KP~p~~~~~ 149 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA-------------AADH-IYLSQDLGMRKPEARIYQH 149 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH-------------hcCE-EEEecccCCCCCCHHHHHH
Confidence 4689999999999999999999999876654433222 12211 1111 11111 11222223
Q ss_pred HHHHHhhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 584 MVKCLKLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 584 ~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
+++.+.-..+.++++||...|+.+-+.||+..
T Consensus 150 ~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 150 VLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 33444334567899999999999999999954
No 168
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=90.38 E-value=0.96 Score=42.09 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=28.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTA 541 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a 541 (881)
+++.+++.+++++++++|++++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 66889999999999999999999999987654
No 169
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=90.27 E-value=1.6 Score=43.39 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=42.6
Q ss_pred eeeeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCCc
Q 043535 501 ILLGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA---TQCGILK 552 (881)
Q Consensus 501 ~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia---~~~gi~~ 552 (881)
.+-|.+.++|..-|++.|+++.|++++.+|..+|....++-..+. +++|+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 466999999999999999999999999999999877665555544 4567654
No 170
>PHA02597 30.2 hypothetical protein; Provisional
Probab=89.85 E-value=0.74 Score=46.57 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH-Hh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC-LK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~-l~ 589 (881)
++.|++.+.+++|++.+ +.+++|..+........+.+|+.. .+. ... +..+.++... .|.+++.. ++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~-~f~--------~~f-~~i~~~~~~~-~kp~~~~~a~~ 141 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNA-LFP--------GAF-SEVLMCGHDE-SKEKLFIKAKE 141 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHH-hCC--------Ccc-cEEEEeccCc-ccHHHHHHHHH
Confidence 36899999999999985 566667655444444455565532 000 000 0112222221 13344333 33
Q ss_pred hcC-CEEEEEcCCccCHHHHHhC--CccE
Q 043535 590 LKG-HVVAVTGNGIKDAPALEEA--NVGL 615 (881)
Q Consensus 590 ~~g-~~v~~iGDg~ND~~~l~~A--~vgI 615 (881)
+.| +.+++|||..+|+.+-++| |+-.
T Consensus 142 ~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 142 KYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 333 4688999999999999999 9963
No 171
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.12 E-value=0.95 Score=45.26 Aligned_cols=91 Identities=15% Similarity=0.171 Sum_probs=59.8
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcC-CHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNY-TEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
.|+ .+.++.|++. +++.++||.....+....++.|+... ++.. ..++ . -..+-.|+-=....+.+...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-fd~i~~~~~-------~-~~~KP~p~~~~~~~~~~~~~ 158 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-FDAVVAADD-------V-QHHKPAPDTFLRCAQLMGVQ 158 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-ceEEEehhh-------c-cCCCCChHHHHHHHHHcCCC
Confidence 444 6889999875 89999999999999999999998641 1110 0000 0 01112232233344444433
Q ss_pred CCEEEEEcCCccCHHHHHhCCcc
Q 043535 592 GHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 592 g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
...+++|||..+|+.+-+.||+-
T Consensus 159 ~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 159 PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHeEEEeccHhhHHHHHHCCCE
Confidence 45688999999999999999985
No 172
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=88.65 E-value=1.3 Score=46.19 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHhhcC-------CEEEEEcCCccCHHHHHhC------CccEeeCCCCcHHHHhhcCeeecc
Q 043535 577 SPDDKLAMVKCLKLKG-------HVVAVTGNGIKDAPALEEA------NVGLSMGIQGTAVAKESSDIIILD 635 (881)
Q Consensus 577 ~p~~K~~~v~~l~~~g-------~~v~~iGDg~ND~~~l~~A------~vgIam~~~~~~~a~~~ad~vl~~ 635 (881)
.-..|+..++.+.+.. ..++++||...|-.|++.. +++|-++......-..+|+|-+.+
T Consensus 162 ~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 162 PGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3345999999887663 2689999999999999763 567777722222334456665543
No 173
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.50 E-value=3.2 Score=48.21 Aligned_cols=94 Identities=14% Similarity=-0.014 Sum_probs=61.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCCch---hhhcCCHHHHHHHHhhheeeec------cCHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQ-CGILKP---EFRNYTEEEKMEKVEKIYVMAR------ASPDDK 581 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~-~gi~~~---~~~~~~~~~~~~~~~~~~v~~~------~~p~~K 581 (881)
+++++.+ .++++|.+ +++|+-...-+..+|++ +|++.- +++.. .+-..-.+ +.-++|
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~---------~~G~~TG~i~g~~~c~Ge~K 177 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVS---------KSGRATGFMKKPGVLVGDHK 177 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEEC---------cCCEEeeeecCCCCCccHHH
Confidence 5666554 44567754 99999999999999987 898841 11100 00001111 234568
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCccEeeC
Q 043535 582 LAMVKCLKLKGHVVAVTGNGIKDAPALEEANVGLSMG 618 (881)
Q Consensus 582 ~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vgIam~ 618 (881)
.+-++..........+.||+.||.|||+.|+.+.+++
T Consensus 178 v~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 178 RDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred HHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeC
Confidence 8777643321122257799999999999999999997
No 174
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=88.41 E-value=5.5 Score=42.76 Aligned_cols=92 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHH
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDD 580 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 580 (881)
|++.-.+.+-+++.++|++|+++|++++++|++... ....-.+++|+.... + .++. +..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~------~---------~i~t---s~~ 72 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA------E---------QLFS---SAL 72 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh------h---------hEec---HHH
Confidence 445556778889999999999999999999997643 333344667875410 0 0221 111
Q ss_pred HHHHHHHHhh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 581 KLAMVKCLKL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 581 K~~~v~~l~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
-..+.|++ .+..|.++|+. .....++.+++-+.
T Consensus 73 --~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 73 --CAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred --HHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 12233444 25689999985 34566777766553
No 175
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=87.83 E-value=0.95 Score=43.60 Aligned_cols=90 Identities=19% Similarity=0.242 Sum_probs=62.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHH-HHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFT----AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPD-DKLAMVK 586 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~K~~~v~ 586 (881)
+++-+++.|..-++.|=+++.+|||.+.. +..+|+...|... .-.+|+...|. .+..-..
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------~pv~f~Gdk~k~~qy~Kt~ 179 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------NPVIFAGDKPKPGQYTKTQ 179 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------cceeeccCCCCcccccccH
Confidence 56778899999999999999999998643 4445666665431 11245444441 2223345
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCc-cEee
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEEANV-GLSM 617 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~A~v-gIam 617 (881)
.+++++-.+-. ||+.||+.|-++|++ ||-+
T Consensus 180 ~i~~~~~~IhY-GDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 180 WIQDKNIRIHY-GDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHHhcCceEEe-cCCchhhhHHHhcCccceeE
Confidence 66777766655 999999999999987 5654
No 176
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=85.87 E-value=3 Score=43.11 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhc-CCHHHHHHHHhhheeeeccCHHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRN-YTEEEKMEKVEKIYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 588 (881)
.++.|++.+.+++|++.|+.+.+.|+.....+..+.+..|+... ++. ...++. .-.+-.|+-=....+.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~-f~~~v~~~dv--------~~~KP~Pd~yL~Aa~~L 155 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY-FDVIVTADDV--------ARGKPAPDIYLLAAERL 155 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh-cchhccHHHH--------hcCCCCCHHHHHHHHHc
Confidence 46899999999999999999999999999999999999998762 111 000000 11133455445555666
Q ss_pred hhcCCEEEEEcCCccCHHHHHhCCccE
Q 043535 589 KLKGHVVAVTGNGIKDAPALEEANVGL 615 (881)
Q Consensus 589 ~~~g~~v~~iGDg~ND~~~l~~A~vgI 615 (881)
.-....+.++.|+.|.+.+-++||.-+
T Consensus 156 gv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 156 GVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCChHHeEEEecchhHHHHHHHCCCEE
Confidence 555677889999999999999999864
No 177
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.58 E-value=0.9 Score=47.24 Aligned_cols=82 Identities=21% Similarity=0.265 Sum_probs=56.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC--------H
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIF---TAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS--------P 578 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~--------p 578 (881)
++.-|++.+.++.++++|++|+++|||+.. ....=.++.|+...+ .++.|.. .
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----------------~l~lr~~~~~~~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----------------HLILRPDKDPSKKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----------------CGEEEEESSTSS----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----------------hhcccccccccccccc
Confidence 466788999999999999999999999744 223334556654310 1222221 2
Q ss_pred HHHHHHHHHHhhcCC-EEEEEcCCccCHHH
Q 043535 579 DDKLAMVKCLKLKGH-VVAVTGNGIKDAPA 607 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~-~v~~iGDg~ND~~~ 607 (881)
+-|..--+.+++.|+ +++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 348888888888865 56779999999765
No 178
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=84.84 E-value=4.2 Score=42.89 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=53.6
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-------
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFT----AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS------- 577 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~------- 577 (881)
+.|.-|++.+..+.+++.|++|+++|||.... ...+ ++.|+...+ .++-|..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~----------------~LiLR~~~D~~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWE----------------KLILKDPQDNSAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcc----------------eeeecCCCCCccch
Confidence 45678899999999999999999999998543 2332 346775310 1333322
Q ss_pred -HHHHHHHHHHHhhcCC-EEEEEcCCccCH
Q 043535 578 -PDDKLAMVKCLKLKGH-VVAVTGNGIKDA 605 (881)
Q Consensus 578 -p~~K~~~v~~l~~~g~-~v~~iGDg~ND~ 605 (881)
.+.|...-+.+.+.|+ +++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 1235555556666666 467799999886
No 179
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.60 E-value=2.7 Score=41.64 Aligned_cols=92 Identities=22% Similarity=0.274 Sum_probs=56.3
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCH----HHHHHHHhh------heeeeccCHHH-
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTE----EEKMEKVEK------IYVMARASPDD- 580 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~----~~~~~~~~~------~~v~~~~~p~~- 580 (881)
+.+++.+++.+++++|++++|+|-- -|+....+..-.- +.....+.. ...+|.-.|++
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 5789999999999999999999852 2232211100000 001111111 11344444442
Q ss_pred -------HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCcc
Q 043535 581 -------KLAMVKCLKLKG---HVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 581 -------K~~~v~~l~~~g---~~v~~iGDg~ND~~~l~~A~vg 614 (881)
..-+.+.+++.+ ....+|||...|+.+-..|+++
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 345556666654 6789999999999998888886
No 180
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.42 E-value=1.7 Score=46.20 Aligned_cols=41 Identities=7% Similarity=0.086 Sum_probs=38.5
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 512 CR-PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 512 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
+| |++.+++++|+++|+++.++|+.....+....+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999985
No 181
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=80.36 E-value=4.1 Score=47.63 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=32.8
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNI------------FTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~------------~~a~~ia~~~gi~ 551 (881)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998554 3466677777765
No 182
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=80.11 E-value=13 Score=39.58 Aligned_cols=109 Identities=20% Similarity=0.273 Sum_probs=69.5
Q ss_pred eeeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc----CCCchhhhcCCHHHHHHHHhhheeeeccCH
Q 043535 503 LGLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC----GILKPEFRNYTEEEKMEKVEKIYVMARASP 578 (881)
Q Consensus 503 lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p 578 (881)
=|++.-.+.+-|++.++|++|+++|++++++|-....+...+++++ +++.. ++. ++. +
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~------~~~---------i~T---S 77 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT------PDD---------IVT---S 77 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC------HHH---------eec---H
Confidence 3788888999999999999999999999999988766666444433 33220 000 121 1
Q ss_pred HHHHHHHHHHhhc--CCEEEEEcCCccCHHHHHhCCccEeeCCCCcHHHHhhcCeeeccCC
Q 043535 579 DDKLAMVKCLKLK--GHVVAVTGNGIKDAPALEEANVGLSMGIQGTAVAKESSDIIILDDN 637 (881)
Q Consensus 579 ~~K~~~v~~l~~~--g~~v~~iGDg~ND~~~l~~A~vgIam~~~~~~~a~~~ad~vl~~~~ 637 (881)
.+ -....++++ +..|.++|.+ .+...++.+|+-+.-..+. ...|+|+...+
T Consensus 78 ~~--at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~~~~~-----~~~d~Vv~g~d 130 (269)
T COG0647 78 GD--ATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVDEEEP-----ARVDAVVVGLD 130 (269)
T ss_pred HH--HHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEeccCCC-----CcccEEEEecC
Confidence 11 122334443 3689999954 6778888888877653222 11677776433
No 183
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=79.86 E-value=3.2 Score=44.24 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=37.6
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 512 CR-PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 512 ~r-~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 35 899999999999999999999888888899999999975
No 184
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=79.62 E-value=11 Score=40.73 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=34.4
Q ss_pred HHHHHHHhhc-----CCEEEEEcCC-ccCHH---HHHhCCccEeeCCCC---cHHHHhhcCeeeccC
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNG-IKDAP---ALEEANVGLSMGIQG---TAVAKESSDIIILDD 636 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg-~ND~~---~l~~A~vgIam~~~~---~~~a~~~ad~vl~~~ 636 (881)
..+++.++.+ |..|+++|-| .-=.| +|..+|..+.+-.+. ...+...||+++.--
T Consensus 144 ~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsav 210 (301)
T PRK14194 144 SGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAV 210 (301)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEec
Confidence 3445555544 8899999997 43444 466777777654222 234456799998643
No 185
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.85 E-value=0.94 Score=44.36 Aligned_cols=92 Identities=14% Similarity=-0.011 Sum_probs=62.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccC-HHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARAS-PDDKLAMVKCL 588 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~-p~~K~~~v~~l 588 (881)
=..||++.+.+++|.+. +++++.|......|..+.+.++.....+. .+++|-+ ...|...++.+
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~--------------~~l~r~~~~~~~~~~~K~L 105 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS--------------RRLYRESCVFTNGKYVKDL 105 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe--------------EEEEccccEEeCCCEEeEc
Confidence 35799999999999988 99999999999999999999886531110 0222211 11112233333
Q ss_pred hh---cCCEEEEEcCCccCHHHHHhCCccEe
Q 043535 589 KL---KGHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 589 ~~---~g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
.. ....|+++||...|..+-+.+++-+.
T Consensus 106 ~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 106 SLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred hhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 33 34579999999988877666655443
No 186
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=78.39 E-value=3.1 Score=43.52 Aligned_cols=87 Identities=11% Similarity=0.058 Sum_probs=54.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec----cCHH--HHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR----ASPD--DKLAM 584 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~----~~p~--~K~~~ 584 (881)
++-|++.+++++|++. +++.++|..+.. .+..|+.. .++ ..+.+. ..|. -=..+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~-~fd-------------~i~~~~~~~~~KP~p~~~~~a 172 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGD-YFE-------------FVLRAGPHGRSKPFSDMYHLA 172 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHH-hhc-------------eeEecccCCcCCCcHHHHHHH
Confidence 4678999999999975 899999886654 25566643 110 011111 1222 11222
Q ss_pred HHHHhhcCCEEEEEcCC-ccCHHHHHhCCccEee
Q 043535 585 VKCLKLKGHVVAVTGNG-IKDAPALEEANVGLSM 617 (881)
Q Consensus 585 v~~l~~~g~~v~~iGDg-~ND~~~l~~A~vgIam 617 (881)
.+.+.-....++||||+ ..|+.+=+.||+-...
T Consensus 173 ~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 173 AEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 23333334679999999 5999999999986543
No 187
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=75.96 E-value=18 Score=37.69 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=37.8
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHH-cCCC
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMIT---GDNIFTAKAIATQ-CGIL 551 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~T---Gd~~~~a~~ia~~-~gi~ 551 (881)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 5555567778899999999999999999998 7777766555555 6764
No 188
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=74.81 E-value=67 Score=32.70 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 043535 834 GSCIGIAAISWPIGWF 849 (881)
Q Consensus 834 ~~~~~~~~~~~~~~~l 849 (881)
++.++++++.+...+.
T Consensus 181 ~~~iiig~i~~~~~~~ 196 (206)
T PF06570_consen 181 WVYIIIGVIAFALRFY 196 (206)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344555555555443
No 189
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=73.67 E-value=11 Score=38.68 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH--HHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK--LAMVKCL 588 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~~v~~l 588 (881)
++-+++.++++++++. ++++++|--.........+++|+.. .++.. +. ..-.....|+.+ ..+.+.+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~-~Fd~v--------~~-s~~~g~~KP~~~~f~~~~~~~ 167 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD-YFDAV--------FI-SEDVGVAKPDPEIFEYALEKL 167 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh-hhheE--------EE-ecccccCCCCcHHHHHHHHHc
Confidence 5778999999999999 9999999988888899999999754 11110 00 000111223222 2223333
Q ss_pred hhcCCEEEEEcCC-ccCHHHHHhCCcc-EeeC
Q 043535 589 KLKGHVVAVTGNG-IKDAPALEEANVG-LSMG 618 (881)
Q Consensus 589 ~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~ 618 (881)
.-..+.+++|||+ .||+..-+.+|.- |-+.
T Consensus 168 g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 168 GVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred CCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 3335679999997 6674666677764 3443
No 190
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=73.35 E-value=16 Score=38.69 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=35.4
Q ss_pred cccCCCCccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCC
Q 043535 507 GIKDPCRPGLKKAVEDCQYAG-VNIKMITGDNIFTAKAIATQCGI 550 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~G-i~v~~~TGd~~~~a~~ia~~~gi 550 (881)
-....+-++..+.+++|.... .-++|+|||+.........-.|+
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 345567889999999999884 57999999999999888764444
No 191
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.58 E-value=6.2 Score=38.79 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=53.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhhee-eeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYV-MARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v-~~~~~p~~K~~~v~~l~ 589 (881)
++.|++.++++ ++.++|.-+........++.|+... ++ ..+....+ ..+-.|+-=..+.+.+.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~-fd--------~v~~~~~~~~~KP~p~~f~~~~~~~~ 153 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY-FD--------RAFSVDTVRAYKPDPVVYELVFDTVG 153 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH-Hh--------hhccHhhcCCCCCCHHHHHHHHHHHC
Confidence 47889999998 3789999999988889999998641 11 11100000 11222332234444454
Q ss_pred hcCCEEEEEcCCccCHHHHHh
Q 043535 590 LKGHVVAVTGNGIKDAPALEE 610 (881)
Q Consensus 590 ~~g~~v~~iGDg~ND~~~l~~ 610 (881)
-....++||||+..|+.+-++
T Consensus 154 ~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 154 LPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CCHHHeEeEecChhhHHHHhc
Confidence 445679999999999887654
No 192
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=72.06 E-value=21 Score=38.55 Aligned_cols=54 Identities=19% Similarity=0.242 Sum_probs=33.3
Q ss_pred HHHHHHHhhc-----CCEEEEEcCC-ccCH---HHHHhCCccEeeCCC---CcHHHHhhcCeeecc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNG-IKDA---PALEEANVGLSMGIQ---GTAVAKESSDIIILD 635 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg-~ND~---~~l~~A~vgIam~~~---~~~~a~~~ad~vl~~ 635 (881)
..+++.|+.+ |..|+++|-+ .-=. .+|..+|..+.+-.+ ..+.+...||+++.-
T Consensus 143 ~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 143 LGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 4455555543 8899999954 3333 346777777766521 233455678999764
No 193
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=68.50 E-value=22 Score=38.07 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=32.9
Q ss_pred HHHHHHHhhc-----CCEEEEEcC-CccCHH---HHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGN-GIKDAP---ALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGD-g~ND~~---~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
..+++.|+.+ |..++++|- |.-=.| +|..+|.-+.+-...+ ......||+++.-
T Consensus 143 ~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 143 AGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 3445555544 889999999 444444 4666666665532222 2345679999864
No 194
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=68.31 E-value=2 Score=44.68 Aligned_cols=131 Identities=15% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhh------cCCHHHHHHHHhhheeeeccCHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFR------NYTEEEKMEKVEKIYVMARASPDDKLA 583 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~------~~~~~~~~~~~~~~~v~~~~~p~~K~~ 583 (881)
-.+|+++.+.++.|++++|.+.++|+.--.....+-++-|...++.. ..+++....-+..-.++ +-.|..
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH----~~NKn~ 164 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIH----TFNKNE 164 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS-------TT-HHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceE----EeeCCc
Confidence 45799999999999999999999999988888888888776654211 11110000000000000 112222
Q ss_pred H-------HHHHhhcCCEEEEEcCCccCHHHHHhC-Ccc--EeeCC-CC-cH----HHHhhcCeeeccCCchHHHHHH
Q 043535 584 M-------VKCLKLKGHVVAVTGNGIKDAPALEEA-NVG--LSMGI-QG-TA----VAKESSDIIILDDNFATAVTLL 645 (881)
Q Consensus 584 ~-------v~~l~~~g~~v~~iGDg~ND~~~l~~A-~vg--Iam~~-~~-~~----~a~~~ad~vl~~~~~~~i~~~i 645 (881)
- -+.++. ...|+..||+.-|+.|-.-. +.. +.+|- |+ .+ .-+++=|+|+.+|.--.++..|
T Consensus 165 ~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~~i 241 (246)
T PF05822_consen 165 SALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPNAI 241 (246)
T ss_dssp HHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHHHH
T ss_pred ccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHHHH
Confidence 1 112222 34688889999999996544 222 22220 22 22 3456789999987655665544
No 195
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=66.13 E-value=31 Score=36.92 Aligned_cols=45 Identities=13% Similarity=0.214 Sum_probs=30.8
Q ss_pred cCCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCCch
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTAK------AIATQCGILKP 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a~------~ia~~~gi~~~ 553 (881)
.++++++.++.++.+++.|++ +.+..||++.... ..|+++|+...
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 64 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSV 64 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 345677788888888877765 4666787766553 35777887653
No 196
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.64 E-value=39 Score=36.13 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=28.6
Q ss_pred CCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCCch
Q 043535 510 DPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTAK------AIATQCGILKP 553 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a~------~ia~~~gi~~~ 553 (881)
.+++++.++.++.+++.|++ ..+.-||++.+.. ..|+++|+...
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 63 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSL 63 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 45667777778888777764 3566777665543 35677777653
No 197
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=64.41 E-value=18 Score=39.96 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=34.9
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-C
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQC-G 549 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~-g 549 (881)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 679999999999999999999999999999999996 6
No 198
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.25 E-value=40 Score=36.06 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=29.3
Q ss_pred cCCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCCch
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTA------KAIATQCGILKP 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a------~~ia~~~gi~~~ 553 (881)
.++++++.++.++.+++.|++ .++.-||++.+. ...|+++|+...
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 63 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSV 63 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 345667777778888777765 456677776554 335667777653
No 199
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.18 E-value=34 Score=36.92 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=33.9
Q ss_pred cCHHHHHHHHHHHhhc-----CCEEEEEcCCcc---CH-HHHH------hCCccEeeCCCCc--HHHHhhcCeeeccC
Q 043535 576 ASPDDKLAMVKCLKLK-----GHVVAVTGNGIK---DA-PALE------EANVGLSMGIQGT--AVAKESSDIIILDD 636 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~-----g~~v~~iGDg~N---D~-~~l~------~A~vgIam~~~~~--~~a~~~ad~vl~~~ 636 (881)
+||. .+++.++.+ |..|+++|.|.. =. .||. .|.|-++-. +.. ...-..||+++..-
T Consensus 141 cTp~---ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 141 CTPY---GILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAAI 214 (295)
T ss_pred CCHH---HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEec
Confidence 4554 445555543 889999999844 22 2343 356666654 322 23557799998743
No 200
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=62.84 E-value=31 Score=36.97 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=32.8
Q ss_pred HHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc-H--HHHhhcCeeeccC
Q 043535 581 KLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGT-A--VAKESSDIIILDD 636 (881)
Q Consensus 581 K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~-~--~a~~~ad~vl~~~ 636 (881)
=..+++.|+.+ |..|+.+|-|.. =+.||...|.-+.+....+ + ..-..||+++.--
T Consensus 142 p~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~av 209 (285)
T PRK14189 142 PYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAV 209 (285)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcC
Confidence 34455555554 789999999865 2335555555554331222 2 3456799998643
No 201
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=61.47 E-value=39 Score=37.12 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=58.0
Q ss_pred eeccccCCCCccHHHHHHHHHhC----CCEEEEEcCCC---HHH-HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeec
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYA----GVNIKMITGDN---IFT-AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMAR 575 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~----Gi~v~~~TGd~---~~~-a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~ 575 (881)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+.. .++++ +..
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~------~~~~i---------~~s 73 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV------SPLQV---------IQS 73 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC------CHHHH---------Hhh
Confidence 67777888999999999999999 99999998554 444 555668888864 12221 111
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCcc
Q 043535 576 ASPDDKLAMVKCLKLKGHVVAVTGNGIKDAPALEEANVG 614 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~l~~A~vg 614 (881)
.. .+...+++.+..++++|.+. -..+++.+++.
T Consensus 74 ~~-----~~~~ll~~~~~~v~viG~~~-~~~~l~~~G~~ 106 (321)
T TIGR01456 74 HS-----PYKSLVNKYEKRILAVGTGS-VRGVAEGYGFQ 106 (321)
T ss_pred hH-----HHHHHHHHcCCceEEEeChH-HHHHHHHcCCc
Confidence 11 12222333344788899864 46666666544
No 202
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.11 E-value=43 Score=35.90 Aligned_cols=60 Identities=20% Similarity=0.233 Sum_probs=31.9
Q ss_pred cCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHh--CCccEeeCCCCcH--HHHhhcCeeeccC
Q 043535 576 ASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEE--ANVGLSMGIQGTA--VAKESSDIIILDD 636 (881)
Q Consensus 576 ~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~--A~vgIam~~~~~~--~a~~~ad~vl~~~ 636 (881)
+||..=.++++...- .|..|+.+|.|.. =+.||.. |.|-++-. ...+ ..-+.||+++.--
T Consensus 139 cTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~Av 208 (285)
T PRK14191 139 ATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVGV 208 (285)
T ss_pred CcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEec
Confidence 444443444443322 2889999999822 2334544 44444433 2222 2446799988643
No 203
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=59.68 E-value=32 Score=35.45 Aligned_cols=86 Identities=13% Similarity=0.120 Sum_probs=55.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFT----AKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
.+-||+.+-++...++|.+|..+|-|..+. ...-.++.|++... +...++-+ .-..|..-.+
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~-------------~~~~llkk-~~k~Ke~R~~ 187 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL-------------ESHLLLKK-DKKSKEVRRQ 187 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc-------------ccceEEee-CCCcHHHHHH
Confidence 456899999999999999999999998776 34445666776521 11112221 1112332233
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHh
Q 043535 587 CLKLKGHVVAVTGNGIKDAPALEE 610 (881)
Q Consensus 587 ~l~~~g~~v~~iGDg~ND~~~l~~ 610 (881)
.+++--..|+.+||..+|-.....
T Consensus 188 ~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 188 AVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred HHhhccceeeEecCchhhhcchhh
Confidence 333445688999999999765543
No 204
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.29 E-value=50 Score=35.31 Aligned_cols=56 Identities=25% Similarity=0.256 Sum_probs=32.6
Q ss_pred HHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeeccC
Q 043535 581 KLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILDD 636 (881)
Q Consensus 581 K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~~ 636 (881)
=..+++.++.+ |..|+.+|-|.. =+.||...|.-|.+....+. ..-..||+++.--
T Consensus 141 p~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAv 208 (282)
T PRK14166 141 PLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAA 208 (282)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcC
Confidence 34445555543 889999999854 23456555555544322222 3446799998643
No 205
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=59.26 E-value=1.4e+02 Score=32.76 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
+|-++.+.||+..++.|..|.++--|=..|-++.-.++++.
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~ 136 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFW 136 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHH
Confidence 46678999999999999999999999888888877776654
No 206
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.93 E-value=54 Score=35.15 Aligned_cols=44 Identities=25% Similarity=0.332 Sum_probs=26.2
Q ss_pred cCCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTA------KAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a------~~ia~~~gi~~ 552 (881)
.+.++++.++.++++++.|++ ..+.-||++... ...|+++|+..
T Consensus 12 A~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 12 AKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 345566777777777766654 244456665443 34566677654
No 207
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.50 E-value=56 Score=35.06 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=32.4
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHh------CCccEeeCCCCcH--HHHhhcCeeeccC
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIK----DAPALEE------ANVGLSMGIQGTA--VAKESSDIIILDD 636 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~------A~vgIam~~~~~~--~a~~~ad~vl~~~ 636 (881)
..+++.|+.+ |..|..+|-|.. =+.||.. |.|-++.. +..+ ..-..||+++..-
T Consensus 142 ~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~Av 212 (286)
T PRK14184 142 AGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVAI 212 (286)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEec
Confidence 3445555544 889999999844 2334544 56666654 3322 3456799998643
No 208
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=58.40 E-value=60 Score=34.69 Aligned_cols=63 Identities=21% Similarity=0.318 Sum_probs=35.0
Q ss_pred eccCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeeccC
Q 043535 574 ARASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILDD 636 (881)
Q Consensus 574 ~~~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~~ 636 (881)
.-+||..=.++++...- .|..|+++|.|.. =+.||...|.-+.+..+.+. ..-..||+++.--
T Consensus 138 ~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAv 209 (278)
T PRK14172 138 LPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAI 209 (278)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcC
Confidence 33455444444444332 3889999999844 23456555555544422222 2346699998643
No 209
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.82 E-value=57 Score=35.18 Aligned_cols=45 Identities=22% Similarity=0.277 Sum_probs=28.7
Q ss_pred cCCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCCch
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTA------KAIATQCGILKP 553 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a------~~ia~~~gi~~~ 553 (881)
.++++++.++.++.+++.|++ .++.-||++.+. ...|+++|+...
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAI 64 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 345677777777777777764 355667766554 335667777653
No 210
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.41 E-value=43 Score=35.98 Aligned_cols=44 Identities=20% Similarity=0.361 Sum_probs=28.3
Q ss_pred cCCCCccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN---IKMITGDNIFTAK------AIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~---v~~~TGd~~~~a~------~ia~~~gi~~ 552 (881)
.++++++.++.++.+++.|++ .++.-||++.... ..|+++|+..
T Consensus 12 a~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 12 AKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 345667777777777777764 3555777765543 3566777765
No 211
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=53.95 E-value=36 Score=33.47 Aligned_cols=97 Identities=10% Similarity=0.148 Sum_probs=54.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHh
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMIT-GDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLK 589 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 589 (881)
.+-|+++++++.|++.|+++.++| -+.+.-|+.+.+.+++.... ....-..+.--+...-|..|..-.+.++
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~-------~~~~~~~~~F~~~eI~~gsK~~Hf~~i~ 117 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDAD-------GDGVPLIEYFDYLEIYPGSKTTHFRRIH 117 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------CCECEEEESSS-HHHHHHHHH
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccc-------cccccchhhcchhheecCchHHHHHHHH
Confidence 467999999999999999999999 47899999999999998210 0000111111234445667777777777
Q ss_pred hc----CCEEEEEcCCccCHHHHHhCCccEe
Q 043535 590 LK----GHVVAVTGNGIKDAPALEEANVGLS 616 (881)
Q Consensus 590 ~~----g~~v~~iGDg~ND~~~l~~A~vgIa 616 (881)
+. -..++++=|-.......+. +||.
T Consensus 118 ~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 118 RKTGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp HHH---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred HhcCCChhHEEEecCchhcceeeEe--cCcE
Confidence 64 2246676666555554443 4543
No 212
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=53.53 E-value=13 Score=39.00 Aligned_cols=92 Identities=7% Similarity=-0.047 Sum_probs=53.6
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHH---hh-heeeeccCHHHHHHHHHHH
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKV---EK-IYVMARASPDDKLAMVKCL 588 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~---~~-~~v~~~~~p~~K~~~v~~l 588 (881)
-++..++++.+++.|++. ++|......+.......|... +...+ .. ......-.|+-=..+.+.+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~----------~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~ 208 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY----------YAELIKQLGGKVIYSGKPYPAIFHKALKEC 208 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH----------HHHHHHHhCCcEecCCCCCHHHHHHHHHHc
Confidence 478899999999999997 778766554433333333221 11111 11 1112233333223344444
Q ss_pred hhc-CCEEEEEcCC-ccCHHHHHhCCccE
Q 043535 589 KLK-GHVVAVTGNG-IKDAPALEEANVGL 615 (881)
Q Consensus 589 ~~~-g~~v~~iGDg-~ND~~~l~~A~vgI 615 (881)
... .+.++||||. .+|+.+=+.|++-.
T Consensus 209 ~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 209 SNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred CCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 322 3479999999 59999999988753
No 213
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=52.78 E-value=20 Score=29.66 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCcc-EeeCCCCc---HHH---HhhcCeeecc
Q 043535 578 PDDKLAMVKCLKLKGHVVAVTGNG-IKDAPALEEANVG-LSMGIQGT---AVA---KESSDIIILD 635 (881)
Q Consensus 578 p~~K~~~v~~l~~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~~~~~---~~a---~~~ad~vl~~ 635 (881)
|.--..+.+.+.-....++||||. ..|+.+=+.+|+- |.+. .|. +.. ...+|+++.+
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEECC
Confidence 333344455554445679999999 9999999999984 4443 222 222 2578888764
No 214
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.35 E-value=90 Score=33.69 Aligned_cols=54 Identities=22% Similarity=0.271 Sum_probs=29.8
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHh--CCccEeeCCCC-cHHHHhhcCeeecc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIK----DAPALEE--ANVGLSMGIQG-TAVAKESSDIIILD 635 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~--A~vgIam~~~~-~~~a~~~ad~vl~~ 635 (881)
..+++.++.+ |..|+++|-|.. =+.||.. |-|-++-.... -...-..||+++.-
T Consensus 143 ~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 143 AGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3444445443 889999999743 2334544 44444443111 12344679999864
No 215
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.19 E-value=97 Score=33.20 Aligned_cols=74 Identities=23% Similarity=0.171 Sum_probs=38.7
Q ss_pred eeccCHHHHHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeeccCCchH
Q 043535 573 MARASPDDKLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILDDNFAT 640 (881)
Q Consensus 573 ~~~~~p~~K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~~~~~~ 640 (881)
|.-+||. .+++.++++ |+.|..+|-|.. =+.||...|--+.+..+.+. ..-+.||+++.--.-..
T Consensus 138 ~~PcTp~---avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~ 214 (284)
T PRK14177 138 YLPCTPY---GMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPE 214 (284)
T ss_pred CCCCCHH---HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcC
Confidence 3344554 445555544 789999999744 23345544444444322222 34567899876432222
Q ss_pred H--HHHHHHhH
Q 043535 641 A--VTLLNWGR 649 (881)
Q Consensus 641 i--~~~i~~gR 649 (881)
. .+.++.|.
T Consensus 215 ~i~~~~ik~ga 225 (284)
T PRK14177 215 FIKADWISEGA 225 (284)
T ss_pred ccCHHHcCCCC
Confidence 2 23455554
No 216
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=50.10 E-value=60 Score=28.81 Aligned_cols=61 Identities=11% Similarity=0.147 Sum_probs=28.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhccc
Q 043535 795 IHKNKSFLGIIGITIVLQVVMVEILKKFADTEGLNWIQWGSCIGIAAISWPIGWFVKCIPV 855 (881)
Q Consensus 795 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~k~~~~ 855 (881)
.+++..++..++.++++.+++-.+++.+++-..-+-..|.+.+++.-+..-+.-+++++.+
T Consensus 38 ~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 38 IWEGLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455555666666666665554455555443322222454444333333333334555554
No 217
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=48.51 E-value=94 Score=33.25 Aligned_cols=63 Identities=21% Similarity=0.377 Sum_probs=33.7
Q ss_pred eeccCHHHHHHHHHHHhh--cCCEEEEEcCCc-cCHH---HHHhCC--ccEeeCCCCcH--HHHhhcCeeeccC
Q 043535 573 MARASPDDKLAMVKCLKL--KGHVVAVTGNGI-KDAP---ALEEAN--VGLSMGIQGTA--VAKESSDIIILDD 636 (881)
Q Consensus 573 ~~~~~p~~K~~~v~~l~~--~g~~v~~iGDg~-ND~~---~l~~A~--vgIam~~~~~~--~a~~~ad~vl~~~ 636 (881)
|.-+||..=.++++...- .|..|..+|-|. -=-| +|...+ |-++-. +..+ ..-..||+++..-
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIvI~Av 203 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADILVSAA 203 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEEEECC
Confidence 333445443344433321 288999999983 3344 554444 444443 2222 3446799998643
No 218
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.88 E-value=94 Score=33.33 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=25.4
Q ss_pred CCCCccHHHHHHHHHhCCCEE---EEEcCCCHHHH------HHHHHHcCCCc
Q 043535 510 DPCRPGLKKAVEDCQYAGVNI---KMITGDNIFTA------KAIATQCGILK 552 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~v---~~~TGd~~~~a------~~ia~~~gi~~ 552 (881)
++++++.++.++.+++.|++. ++.-||++... ...|+++|+..
T Consensus 13 ~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14193 13 DEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITS 64 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 445666677777777666643 44466665443 33566677654
No 219
>PTZ00445 p36-lilke protein; Provisional
Probab=47.72 E-value=23 Score=35.96 Aligned_cols=65 Identities=11% Similarity=0.204 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcchhhhhhhhccCCCCcccccccCceeee-----e-------ccccCCCCccHHHHHHHHHhCCCEE
Q 043535 463 RERFEQIIQGMAAGSLQCLAFAHKQVPVPEEELNEENLILLG-----L-------LGIKDPCRPGLKKAVEDCQYAGVNI 530 (881)
Q Consensus 463 ~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~~~~~e~~l~~lG-----~-------i~~~D~~r~~~~~~I~~l~~~Gi~v 530 (881)
.+..+..++.+.+.|.|++++-. |.++++ . ..+--.++|+...-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~-------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDF-------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecc-------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 45566777888999999888664 333333 1 1112237999999999999999999
Q ss_pred EEEcCCCHHH
Q 043535 531 KMITGDNIFT 540 (881)
Q Consensus 531 ~~~TGd~~~~ 540 (881)
.++|=-..++
T Consensus 95 ~VVTfSd~~~ 104 (219)
T PTZ00445 95 SVVTFSDKEL 104 (219)
T ss_pred EEEEccchhh
Confidence 9999666544
No 220
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=46.76 E-value=1.3e+02 Score=33.07 Aligned_cols=57 Identities=19% Similarity=0.117 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeeccC
Q 043535 580 DKLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIILDD 636 (881)
Q Consensus 580 ~K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~~ 636 (881)
.=..+++.|+.+ |+.|..+|-+.. =+.||...|.-|.+...-+ ...-..||+++.--
T Consensus 197 Tp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAv 265 (345)
T PLN02897 197 TPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAA 265 (345)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEcc
Confidence 334455555544 889999999743 2335655555444431111 23446799998643
No 221
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.09 E-value=84 Score=33.72 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=32.7
Q ss_pred ccCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeeccC
Q 043535 575 RASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILDD 636 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~~ 636 (881)
-+||..=.++++...- .|..|+.+|-|.. =+.||...|.-|.+....+. ..-..||+++..-
T Consensus 140 PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~av 210 (285)
T PRK10792 140 PCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAV 210 (285)
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcC
Confidence 3444443344443321 2889999999852 22345544444444212222 3446799998643
No 222
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.29 E-value=1.1e+02 Score=32.77 Aligned_cols=55 Identities=25% Similarity=0.239 Sum_probs=30.9
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeeccC
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIILDD 636 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~~ 636 (881)
..+++.|+++ |..|+.+|.|.. =+.||...|--+.+...-+ ...-+.||+++.--
T Consensus 142 ~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~Av 208 (281)
T PRK14183 142 LGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGV 208 (281)
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEec
Confidence 4455555544 889999999832 2334544444443331222 23346799998643
No 223
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=45.04 E-value=1.1e+02 Score=38.06 Aligned_cols=38 Identities=8% Similarity=0.048 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcC
Q 043535 512 CRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCG 549 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~g 549 (881)
+.++..+++++|.+. +..|+++|||+..+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 567889999999865 67899999999999988776543
No 224
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=43.72 E-value=4.2e+02 Score=34.16 Aligned_cols=85 Identities=18% Similarity=0.057 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhcCCceEE-----EeCCEEEEEeccccccCcEEEEcCC
Q 043535 99 LAFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSK------VSNSIQVDV-----VRNKRRQQILLSNVVVGDVICLKIG 167 (881)
Q Consensus 99 ~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~------~~~~~~v~V-----~Rdg~~~~I~~~~Lv~GDII~l~~G 167 (881)
+..+..+++++++..+++.+.+++.++..+++.+. .....+... +.-|....+..-|.+|.|.+.++.+
T Consensus 104 ~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 104 LYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEcc
Confidence 34555666666777778999999888887774431 111222222 2358889999999999999999875
Q ss_pred CeeccceeEEeccceee
Q 043535 168 DQVPADGIFLDGHSLQI 184 (881)
Q Consensus 168 ~~vPaD~~ll~g~~l~v 184 (881)
+ +=+|=-.+.|++..+
T Consensus 184 ~-l~VdeS~LTGES~pv 199 (997)
T TIGR01106 184 G-CKVDNSSLTGESEPQ 199 (997)
T ss_pred C-cEEEccccCCCCCce
Confidence 3 446666677776433
No 225
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=43.38 E-value=2.8e+02 Score=34.46 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=19.5
Q ss_pred ccCcEEEEcCCCeeccceeEEeccc
Q 043535 157 VVGDVICLKIGDQVPADGIFLDGHS 181 (881)
Q Consensus 157 v~GDII~l~~G~~vPaD~~ll~g~~ 181 (881)
+-|....+...|.+|-|.++++..+
T Consensus 98 Rdg~~~~I~~~~Lv~GDiV~l~~Gd 122 (755)
T TIGR01647 98 RDGKWQEIPASELVPGDVVRLKIGD 122 (755)
T ss_pred ECCEEEEEEhhhCcCCCEEEECCCC
Confidence 4477788888999999998887543
No 226
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.35 E-value=1.2e+02 Score=32.68 Aligned_cols=54 Identities=20% Similarity=0.094 Sum_probs=29.6
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
..+++.|+.+ |..|+.+|-|.. =+.||...|--+.+...-+ ...-..||+++.-
T Consensus 145 ~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsA 210 (294)
T PRK14187 145 KGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAA 210 (294)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3445555543 889999998743 2334544444444331222 2334678998764
No 227
>PRK11507 ribosome-associated protein; Provisional
Probab=43.12 E-value=26 Score=28.79 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=22.9
Q ss_pred EEEeCCEEEEEeccccccCcEEEEcC
Q 043535 141 DVVRNKRRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 141 ~V~Rdg~~~~I~~~~Lv~GDII~l~~ 166 (881)
.|..||+...-.-..|+|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779999999999999999999865
No 228
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=42.39 E-value=26 Score=32.01 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=30.9
Q ss_pred CCccHHHHHHHHHhCCCE-EEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVN-IKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~-v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
+.+.+.+.++++.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 566899999999999996 8999999999999999998874
No 229
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=41.96 E-value=98 Score=30.54 Aligned_cols=127 Identities=15% Similarity=0.115 Sum_probs=64.0
Q ss_pred ccCCCCccHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHH
Q 043535 508 IKDPCRPGLKKAVEDC-QYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVK 586 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l-~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 586 (881)
+.+-.-+++.+..+++ .+.|.+|++..|. ||..+.+..+++- +-...+..+-.+.+.
T Consensus 14 v~~~~~e~~v~~a~~~~~~~g~dViIsRG~---ta~~lr~~~~iPV-------------------V~I~~s~~Dil~al~ 71 (176)
T PF06506_consen 14 VIEASLEEAVEEARQLLESEGADVIISRGG---TAELLRKHVSIPV-------------------VEIPISGFDILRALA 71 (176)
T ss_dssp EEE--HHHHHHHHHHHHTTTT-SEEEEEHH---HHHHHHCC-SS-E-------------------EEE---HHHHHHHHH
T ss_pred EEEecHHHHHHHHHHhhHhcCCeEEEECCH---HHHHHHHhCCCCE-------------------EEECCCHhHHHHHHH
Confidence 4444567788888888 8999999999886 5666666666654 333333333333333
Q ss_pred HHhhcCCEEEEEcC------------------------CccCHHH----HHhCCccEeeCCCCcH-HHH-hhcCeeeccC
Q 043535 587 CLKLKGHVVAVTGN------------------------GIKDAPA----LEEANVGLSMGIQGTA-VAK-ESSDIIILDD 636 (881)
Q Consensus 587 ~l~~~g~~v~~iGD------------------------g~ND~~~----l~~A~vgIam~~~~~~-~a~-~~ad~vl~~~ 636 (881)
..++.+.+++.+|. ...|+.. ++..|+.+-+|+.... .|+ .--..++...
T Consensus 72 ~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~G~~viVGg~~~~~~A~~~gl~~v~i~s 151 (176)
T PF06506_consen 72 KAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAEGVDVIVGGGVVCRLARKLGLPGVLIES 151 (176)
T ss_dssp HCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHTT--EEEESHHHHHHHHHTTSEEEESS-
T ss_pred HHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHcCCcEEECCHHHHHHHHHcCCcEEEEEe
Confidence 33333333333332 2223221 2223444444421111 111 1234456666
Q ss_pred CchHHHHHHHHhHHHHHHHH
Q 043535 637 NFATAVTLLNWGRCVYVNIQ 656 (881)
Q Consensus 637 ~~~~i~~~i~~gR~~~~~i~ 656 (881)
+..++..++.+++++.+..+
T Consensus 152 g~esi~~Al~eA~~i~~~~~ 171 (176)
T PF06506_consen 152 GEESIRRALEEALRIARARR 171 (176)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 78899999999998887654
No 230
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.41 E-value=99 Score=33.22 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=34.1
Q ss_pred eeccCHHHHHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeeccC
Q 043535 573 MARASPDDKLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILDD 636 (881)
Q Consensus 573 ~~~~~p~~K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~~ 636 (881)
|.-+||.. +++.++.+ |..|+.+|-|.. =+.||...|--+.+..+-+. ..-..||+++.--
T Consensus 138 ~~PcTp~a---v~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~Av 210 (288)
T PRK14171 138 FIPCTALG---CLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAI 210 (288)
T ss_pred CcCCCHHH---HHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcc
Confidence 33344544 55555544 789999999743 23355555555444322222 2346799998643
No 231
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=40.81 E-value=15 Score=29.84 Aligned_cols=27 Identities=22% Similarity=0.227 Sum_probs=15.2
Q ss_pred EEEeCCEEEEEeccccccCcEEEEcCCC
Q 043535 141 DVVRNKRRQQILLSNVVVGDVICLKIGD 168 (881)
Q Consensus 141 ~V~Rdg~~~~I~~~~Lv~GDII~l~~G~ 168 (881)
.|..||+...-....|.|||+|.+ .|.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCE
Confidence 366799999999999999999999 443
No 232
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=40.56 E-value=2.7e+02 Score=28.50 Aligned_cols=60 Identities=18% Similarity=0.167 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----h---hhcCCceEEE-----eCCEEEEEeccccccCcEEEEcCC
Q 043535 108 AVSIYISVSASSKYMQNKKFEKLLS----K---VSNSIQVDVV-----RNKRRQQILLSNVVVGDVICLKIG 167 (881)
Q Consensus 108 ~i~~~~~i~~~~~~~~~~~~~~~l~----~---~~~~~~v~V~-----Rdg~~~~I~~~~Lv~GDII~l~~G 167 (881)
.+++..++..+.+++.++..+++.+ + .....+.+.+ +-|....+...|.+|.|.+.++.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 5 LILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc
Confidence 3444555666666666666655211 1 1112222222 246777777777888888887744
No 233
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=39.83 E-value=1.5e+02 Score=37.46 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=31.9
Q ss_pred CCccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 043535 512 CRPGLKKAVEDCQYA-GVNIKMITGDNIFTAKAIATQCGI 550 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~-Gi~v~~~TGd~~~~a~~ia~~~gi 550 (881)
+.+++.+++++|.+. +..|+++|||...+.......+++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 457788999999875 678999999999999888766543
No 234
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=39.51 E-value=2.2e+02 Score=30.47 Aligned_cols=164 Identities=14% Similarity=0.103 Sum_probs=99.5
Q ss_pred EeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc---------------ccccc-
Q 043535 434 WKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE---------------EELNE- 497 (881)
Q Consensus 434 ~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---------------~~~~e- 497 (881)
.-|.|..+.+..... +-....-+=-.-........++.++||.++.++.+.-++-. .++.+
T Consensus 73 AHGv~~~~~~~~~~~---gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~ 149 (280)
T TIGR00216 73 AHGVPPEVREELEKK---GLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLEN 149 (280)
T ss_pred CCCCCHHHHHHHHHC---CCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHh
Confidence 347666666544321 11111112223456777889999999999999987765510 00000
Q ss_pred -cCceeeeeccccCCCCccHHHHHHHHHhCC----C----EEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHh
Q 043535 498 -ENLILLGLLGIKDPCRPGLKKAVEDCQYAG----V----NIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVE 568 (881)
Q Consensus 498 -~~l~~lG~i~~~D~~r~~~~~~I~~l~~~G----i----~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 568 (881)
....-+|++.=.-...++..+.++.|++.. + .++-.|-+....+..+|+++.+.-
T Consensus 150 l~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi---------------- 213 (280)
T TIGR00216 150 FKVEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI---------------- 213 (280)
T ss_pred CCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE----------------
Confidence 011236666666666777777777777765 2 255667777777777877766543
Q ss_pred hheeeeccCHHHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhC-CccEeeCC
Q 043535 569 KIYVMARASPDDKLAMVKCLKLKGHVVAVTGNG-IKDAPALEEA-NVGLSMGI 619 (881)
Q Consensus 569 ~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg-~ND~~~l~~A-~vgIam~~ 619 (881)
|...-...+-.++.+..++.|..+..|.+. .-|..+|+.+ .|||.-|.
T Consensus 214 ---VVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAGA 263 (280)
T TIGR00216 214 ---VIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAGA 263 (280)
T ss_pred ---EECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEecC
Confidence 555555556667778888888777777553 2255677755 35887763
No 235
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=39.06 E-value=1.7e+02 Score=32.41 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=33.1
Q ss_pred eeccCHHHHHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCC--ccEeeCCCC-cHHHHhhcCeeecc
Q 043535 573 MARASPDDKLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEAN--VGLSMGIQG-TAVAKESSDIIILD 635 (881)
Q Consensus 573 ~~~~~p~~K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~--vgIam~~~~-~~~a~~~ad~vl~~ 635 (881)
|.-+||.. +++.|+.+ |+.|..+|-+.. =+.||...| |-++-.... -...-..||+++.-
T Consensus 210 f~PCTp~a---vielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsA 281 (364)
T PLN02616 210 FVPCTPKG---CIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISA 281 (364)
T ss_pred CCCCCHHH---HHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 33445544 55556544 889999998743 233454444 444433111 12344678998764
No 236
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=38.97 E-value=58 Score=30.66 Aligned_cols=82 Identities=9% Similarity=0.054 Sum_probs=54.3
Q ss_pred HHHHhcchhhhhhhhccCCCCc-ccccccCceeeeeccccCCCCccHHHHHHHHHhCCC--EEEEEcCCC---HHH---H
Q 043535 471 QGMAAGSLQCLAFAHKQVPVPE-EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV--NIKMITGDN---IFT---A 541 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~~-~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi--~v~~~TGd~---~~~---a 541 (881)
..+...|++|+-++...-++.- +...+.+-..+|+-++.=.--+..++.++.|+++|. .++++-|-. .+. .
T Consensus 23 ~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~ 102 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDV 102 (134)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHH
Confidence 3456788888877754432210 122345677888888877777889999999999997 356676642 122 2
Q ss_pred HHHHHHcCCCc
Q 043535 542 KAIATQCGILK 552 (881)
Q Consensus 542 ~~ia~~~gi~~ 552 (881)
..-++++|+..
T Consensus 103 ~~~l~~~Gv~~ 113 (134)
T TIGR01501 103 EKRFKEMGFDR 113 (134)
T ss_pred HHHHHHcCCCE
Confidence 44578999876
No 237
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=38.63 E-value=34 Score=36.68 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=52.0
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhh-----heeeeccCHHHHHHHHHH
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEK-----IYVMARASPDDKLAMVKC 587 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-----~~v~~~~~p~~K~~~v~~ 587 (881)
-+++.++++.|++.|+ ..++|......... . +... .....+.+.+.. .....+-+|+-=..+++.
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~--~--~~~~-----~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~ 214 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLS--D--GSRT-----PGTGSLVAAIETASGRQPLVVGKPSPYMFECITEN 214 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCc--C--CCcc-----cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHH
Confidence 5689999999999998 56777654322100 0 1100 011111111111 111233444433444455
Q ss_pred HhhcCCEEEEEcCC-ccCHHHHHhCCcc
Q 043535 588 LKLKGHVVAVTGNG-IKDAPALEEANVG 614 (881)
Q Consensus 588 l~~~g~~v~~iGDg-~ND~~~l~~A~vg 614 (881)
+.-..+.++||||. ..|+.+=+.|++-
T Consensus 215 ~~~~~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 215 FSIDPARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred hCCChhhEEEECCChHHHHHHHHHcCCc
Confidence 54446789999999 5999999999985
No 238
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.62 E-value=49 Score=32.06 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=38.3
Q ss_pred cCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.=.+||++.+.++++++. ++++++|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345799999999999955 9999999999999999999998764
No 239
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=37.56 E-value=18 Score=30.77 Aligned_cols=22 Identities=27% Similarity=0.608 Sum_probs=16.2
Q ss_pred EeccccccCcEEEE-cCCCeecc
Q 043535 151 ILLSNVVVGDVICL-KIGDQVPA 172 (881)
Q Consensus 151 I~~~~Lv~GDII~l-~~G~~vPa 172 (881)
+.-.+|.+||.|.+ ++||+||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34568999999998 57999995
No 240
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.22 E-value=94 Score=33.46 Aligned_cols=43 Identities=12% Similarity=0.231 Sum_probs=25.4
Q ss_pred CCCCccHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHcCCCc
Q 043535 510 DPCRPGLKKAVEDCQYA-GVN---IKMITGDNIFTA------KAIATQCGILK 552 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~-Gi~---v~~~TGd~~~~a------~~ia~~~gi~~ 552 (881)
++++++.++.++.+++. |++ .++.-||++... ...|+++|+..
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKS 63 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 34566677777777665 554 355566665544 33566667654
No 241
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.87 E-value=16 Score=36.32 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=12.4
Q ss_pred EEecCccccccCce
Q 043535 320 ICTDKTGTLTLNQM 333 (881)
Q Consensus 320 i~~DKTGTLT~~~m 333 (881)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999998873
No 242
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.51 E-value=1.1e+02 Score=31.96 Aligned_cols=130 Identities=15% Similarity=0.197 Sum_probs=67.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh------hhcCCHHHHHHHHhhh--eeeeccCHHHHHH
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE------FRNYTEEEKMEKVEKI--YVMARASPDDKLA 583 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~------~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~ 583 (881)
+|++..+....|++.+|++.++|..--.....+-++.....+. +....+........+. ..|.+.+.- .+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v--~~ 216 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSV--LQ 216 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHH--HH
Confidence 5889999999999999999999877666555554444333221 1111111110000000 012222111 01
Q ss_pred HH-HHHh--hcCCEEEEEcCCccCHHHHHhC-Ccc----EeeCCCCcH----HHHhhcCeeeccCCchHHHH
Q 043535 584 MV-KCLK--LKGHVVAVTGNGIKDAPALEEA-NVG----LSMGIQGTA----VAKESSDIIILDDNFATAVT 643 (881)
Q Consensus 584 ~v-~~l~--~~g~~v~~iGDg~ND~~~l~~A-~vg----Iam~~~~~~----~a~~~ad~vl~~~~~~~i~~ 643 (881)
.. +.+. +-+..|...||+.-|+.|-.-+ ++| |+......+ .-++.-|+|+..|....+..
T Consensus 217 ~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~ 288 (298)
T KOG3128|consen 217 NESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVAN 288 (298)
T ss_pred hhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhH
Confidence 10 1111 1255788889999999884321 111 222211112 23467899998876655553
No 243
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=35.50 E-value=86 Score=29.15 Aligned_cols=85 Identities=12% Similarity=0.192 Sum_probs=46.5
Q ss_pred ccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH
Q 043535 508 IKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 508 ~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 587 (881)
+-+++.++..+.+++ |+.+.+......+......+.+.. ++++..+.-..++++.
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~---------------------ii~~~~~~~~~~~l~~ 57 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA---------------------IIVGSGTPLTAEVLEA 57 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE---------------------EEESTTSTBSHHHHHH
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE---------------------EEEcCCCCcCHHHHhc
Confidence 345555555555555 777777764444433333222211 3444433222345555
Q ss_pred HhhcCCEEEEEcCCcc--CHHHHHhCCccEeeC
Q 043535 588 LKLKGHVVAVTGNGIK--DAPALEEANVGLSMG 618 (881)
Q Consensus 588 l~~~g~~v~~iGDg~N--D~~~l~~A~vgIam~ 618 (881)
+ ..-+.+...|-|.| |..++++-|+-++-.
T Consensus 58 ~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 58 A-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp H-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred c-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 5 34457777888888 888999999988765
No 244
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=35.21 E-value=1.1e+02 Score=31.90 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=60.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH--HHHHHHHh
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK--LAMVKCLK 589 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~~v~~l~ 589 (881)
+-++..+++++||++|..+.++|-=.... ..+-..+|+.. . ++..+..+.+-. ..|+-+ ...++.+.
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~-~--------fD~vv~S~e~g~-~KPDp~If~~al~~l~ 182 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSA-Y--------FDFVVESCEVGL-EKPDPRIFQLALERLG 182 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHH-h--------hhhhhhhhhhcc-CCCChHHHHHHHHHhC
Confidence 34556699999999998888887544332 25566666642 1 111111111111 122221 23344555
Q ss_pred hcCCEEEEEcCC-ccCHHHHHhCCcc-EeeCCCCcHHHHh
Q 043535 590 LKGHVVAVTGNG-IKDAPALEEANVG-LSMGIQGTAVAKE 627 (881)
Q Consensus 590 ~~g~~v~~iGDg-~ND~~~l~~A~vg-Iam~~~~~~~a~~ 627 (881)
-+.+.++++||. .||...-+.+|.- +-+. +.....++
T Consensus 183 v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~~ 221 (237)
T KOG3085|consen 183 VKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALKE 221 (237)
T ss_pred CChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhhh
Confidence 556779999996 8999998888874 4444 55444443
No 245
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.20 E-value=2.2e+02 Score=30.26 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=47.5
Q ss_pred cCCCCccHHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHcC-CCchhhhcCCHHHHHHHHhhheeeec--------cC
Q 043535 509 KDPCRPGLKKAVEDCQYAGVN-IKMITGDN-IFTAKAIATQCG-ILKPEFRNYTEEEKMEKVEKIYVMAR--------AS 577 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~Gi~-v~~~TGd~-~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~v~~~--------~~ 577 (881)
-|-+-++..+.++.+++.|+. +.++|-.. .+....+++... +.. +.++ .-
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY-------------------~vS~~GvTG~~~~~ 186 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIY-------------------LVSTTGVTGLKTEL 186 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEE-------------------EEcCCCCCCCCccc
Confidence 344445566666666666664 44444443 344445555443 211 1111 11
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCccCHHH---HHhCCc-cEeeC
Q 043535 578 PDDKLAMVKCLKLKGHVVAVTGNGIKDAPA---LEEANV-GLSMG 618 (881)
Q Consensus 578 p~~K~~~v~~l~~~g~~v~~iGDg~ND~~~---l~~A~v-gIam~ 618 (881)
+++-.+.++.+++.-..-.++|-|.|+... +..++. |+-+|
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 344567777777765555667999985544 443423 55555
No 246
>PF15584 Imm44: Immunity protein 44
Probab=34.90 E-value=18 Score=31.09 Aligned_cols=19 Identities=32% Similarity=0.650 Sum_probs=16.0
Q ss_pred cCcEEEEcCCCeeccceeE
Q 043535 158 VGDVICLKIGDQVPADGIF 176 (881)
Q Consensus 158 ~GDII~l~~G~~vPaD~~l 176 (881)
+.+-.+|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556788999999999986
No 247
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.96 E-value=75 Score=34.08 Aligned_cols=60 Identities=17% Similarity=0.193 Sum_probs=31.4
Q ss_pred ccCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeec
Q 043535 575 RASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIIL 634 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~ 634 (881)
-+||..=.++++...- .|..|+.+|-|.. =+.+|...|.-|.+....+ ...-..||+++.
T Consensus 145 PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 145 PCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 3445444444444321 3889999999852 2334554444444331222 223467898875
No 248
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=33.41 E-value=93 Score=25.48 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=24.4
Q ss_pred CCceEEEeCCEEEEEec---cccccCcEEEEcCCC
Q 043535 137 SIQVDVVRNKRRQQILL---SNVVVGDVICLKIGD 168 (881)
Q Consensus 137 ~~~v~V~Rdg~~~~I~~---~~Lv~GDII~l~~G~ 168 (881)
...+.|-.+|..++++. .++.|||-|.+..|.
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 34677888999999974 468899999999994
No 249
>PRK15108 biotin synthase; Provisional
Probab=32.92 E-value=4.3e+02 Score=29.30 Aligned_cols=84 Identities=15% Similarity=0.189 Sum_probs=56.1
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCch--hhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhc
Q 043535 514 PGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKP--EFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLK 591 (881)
Q Consensus 514 ~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 591 (881)
+...+.++.+++.|+.+.+.-|.-......--++.|++.. .++. +++. .. .++..-+.+++.+.++..++.
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~leT-~p~~----f~--~I~~~~~~~~rl~~i~~a~~~ 183 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLDT-SPEF----YG--NIITTRTYQERLDTLEKVRDA 183 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeecccc-ChHh----cC--CCCCCCCHHHHHHHHHHHHHc
Confidence 6788889999999998876667666666666778888743 1222 2221 11 144555778899999999988
Q ss_pred CCEEE---EEcCCccC
Q 043535 592 GHVVA---VTGNGIKD 604 (881)
Q Consensus 592 g~~v~---~iGDg~ND 604 (881)
|..+. ++|=|-.+
T Consensus 184 G~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 184 GIKVCSGGIVGLGETV 199 (345)
T ss_pred CCceeeEEEEeCCCCH
Confidence 86654 55665444
No 250
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=31.45 E-value=52 Score=29.06 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=25.6
Q ss_pred EEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEe
Q 043535 142 VVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLD 178 (881)
Q Consensus 142 V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~ 178 (881)
|.-||+.. -|+.++++||+|.|.-|... -...|+.
T Consensus 36 V~vNG~~a-KpS~~VK~GD~l~i~~~~~~-~~v~Vl~ 70 (100)
T COG1188 36 VKVNGQRA-KPSKEVKVGDILTIRFGNKE-FTVKVLA 70 (100)
T ss_pred EEECCEEc-ccccccCCCCEEEEEeCCcE-EEEEEEe
Confidence 44477766 79999999999999988654 2344444
No 251
>PLN03190 aminophospholipid translocase; Provisional
Probab=31.25 E-value=1.3e+03 Score=30.24 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=51.3
Q ss_pred cHHHHHHHHhhHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hcCCceEE
Q 043535 74 SFFSFVVDTFKSFTVLILFVCAIL------SLAFGL-NLFIAVSIYISVSASSKYMQNKKFEKLLSKV----SNSIQVDV 142 (881)
Q Consensus 74 ~~~~~l~~~f~~~~~~~ll~~ail------~~~~~~-~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~~----~~~~~v~V 142 (881)
.+|.-|.+ +.+.++++..+.-++ .-...+ ..++++++..+-.++.+|.++++-++...+. .+.....+
T Consensus 106 ~L~eQF~r-~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i 184 (1178)
T PLN03190 106 NLFEQFHR-VAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEK 184 (1178)
T ss_pred HHHHHHHh-hhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEE
Confidence 35555443 444444444444322 122333 3444444555667777777766655532222 11212222
Q ss_pred ----EeCCEEEEEeccccccCcEEEEcC
Q 043535 143 ----VRNKRRQQILLSNVVVGDVICLKI 166 (881)
Q Consensus 143 ----~Rdg~~~~I~~~~Lv~GDII~l~~ 166 (881)
++=|....+...|.+|-|.+.+..
T Consensus 185 ~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 185 KWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred eHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 346889999999999999999973
No 252
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=30.51 E-value=2.6e+02 Score=30.31 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=30.4
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 582 LAMVKCLKLK-----GHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 582 ~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
..+++.++.+ |..|+.+|-+.. =+.||...|--|.+....+ +..-..||+++.-
T Consensus 152 ~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~A 217 (299)
T PLN02516 152 KGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAA 217 (299)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3455555554 789999999844 2334544444443331222 2344678998864
No 253
>PLN02591 tryptophan synthase
Probab=30.03 E-value=3.3e+02 Score=28.68 Aligned_cols=90 Identities=18% Similarity=0.190 Sum_probs=55.9
Q ss_pred CCCCccHHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHc-CCCchhhhcCCHHHHHHHHhhheeeec--------cCH
Q 043535 510 DPCRPGLKKAVEDCQYAGVN-IKMITGDN-IFTAKAIATQC-GILKPEFRNYTEEEKMEKVEKIYVMAR--------ASP 578 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~Gi~-v~~~TGd~-~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~v~~~--------~~p 578 (881)
|-+-++..+..+.+++.|+. +.++|-.. .+....+++.. |+.. ..++ ..|
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-------------------~Vs~~GvTG~~~~~~ 174 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-------------------LVSSTGVTGARASVS 174 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-------------------EeeCCCCcCCCcCCc
Confidence 44447788888888888886 45555555 35566676664 2221 1111 125
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCcc---CHHHHHhC-CccEeeC
Q 043535 579 DDKLAMVKCLKLKGHVVAVTGNGIK---DAPALEEA-NVGLSMG 618 (881)
Q Consensus 579 ~~K~~~v~~l~~~g~~v~~iGDg~N---D~~~l~~A-~vgIam~ 618 (881)
.+-.+.++.+++....-.++|-|.+ |+..+... -=|+-+|
T Consensus 175 ~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 175 GRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred hhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 5666778888887666677799988 55555554 3355555
No 254
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.77 E-value=2.5e+02 Score=30.19 Aligned_cols=63 Identities=16% Similarity=0.298 Sum_probs=32.2
Q ss_pred eeccCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHhCCccEeeCCCCcH---HHHhhcCeeecc
Q 043535 573 MARASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEEANVGLSMGIQGTA---VAKESSDIIILD 635 (881)
Q Consensus 573 ~~~~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~~---~a~~~ad~vl~~ 635 (881)
|.-+||..=.++++...- .|..|+.+|-+.. =+.||...|--|.+..+.+. ..-..||+++.-
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsA 205 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVA 205 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 333445443344433321 2789999998744 23355544444433212222 334668998764
No 255
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=29.64 E-value=1.1e+03 Score=30.09 Aligned_cols=111 Identities=12% Similarity=0.098 Sum_probs=63.9
Q ss_pred CcHHHHHHHHhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------h-hc------CC
Q 043535 73 ESFFSFVVDTFKSFTVLILFVCAIL-SLAFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSK------V-SN------SI 138 (881)
Q Consensus 73 ~~~~~~l~~~f~~~~~~~ll~~ail-~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~------~-~~------~~ 138 (881)
..+++-+.+-|.-...+.-++..++ .+..+..+++.+++..+++.+.+++.++..+++.+. . ++ ..
T Consensus 95 ~~~~~~~~~p~~~lL~~aa~ls~~~~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~ 174 (902)
T PRK10517 95 VHLWVCYRNPFNILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENG 174 (902)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCe
Confidence 4455555544443332222222222 244455666667777888888898888777763321 1 12 01
Q ss_pred ceEE----EeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceee
Q 043535 139 QVDV----VRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQI 184 (881)
Q Consensus 139 ~v~V----~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~v 184 (881)
...| +.-|....+..-|.+|-|.+.++. +-+=+|=-.+.|++..+
T Consensus 175 ~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV 223 (902)
T PRK10517 175 WLEIPIDQLVPGDIIKLAAGDMIPADLRILQA-RDLFVAQASLTGESLPV 223 (902)
T ss_pred EEEEEHHhCCCCCEEEECCCCEEeeeEEEEEc-CceEEEecCcCCCCCce
Confidence 1222 224778888899999999888874 33446666667776544
No 256
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=29.23 E-value=85 Score=37.46 Aligned_cols=76 Identities=16% Similarity=0.287 Sum_probs=46.3
Q ss_pred EeccccccCcEEEEc-CCCeec-cceeEEeccceeeecCCccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHH
Q 043535 151 ILLSNVVVGDVICLK-IGDQVP-ADGIFLDGHSLQIQESDHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQI 228 (881)
Q Consensus 151 I~~~~Lv~GDII~l~-~G~~vP-aD~~ll~g~~l~vdes~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i 228 (881)
|.-.||++||-|.|+ +||+|| .++++.+... - +..+ .+ -+...=..||.+...+..+..-+++..+.-++.
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~R~--~-~~~~-~~---~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~aq~ 435 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEKRP--G-NEKP-IP---FPTHCPVCGSELVREEGEVVIRCTNGLNCPAQL 435 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeecccCC--C-CCCC-CC---CCCCCCCCCCeeEeccCceeEecCCCCCChHHH
Confidence 345799999999995 699999 5555555432 1 1111 11 011122578888876666666667756666676
Q ss_pred Hhhhc
Q 043535 229 MRQTS 233 (881)
Q Consensus 229 ~~~~~ 233 (881)
.+.+.
T Consensus 436 ~e~l~ 440 (667)
T COG0272 436 KERLI 440 (667)
T ss_pred hhhee
Confidence 65544
No 257
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=29.06 E-value=1.1e+03 Score=28.43 Aligned_cols=15 Identities=20% Similarity=0.124 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHhcc
Q 043535 840 AAISWPIGWFVKCIP 854 (881)
Q Consensus 840 ~~~~~~~~~l~k~~~ 854 (881)
.+..+++..+.++++
T Consensus 363 ~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 363 CAGAVILGLLFSKIR 377 (599)
T ss_pred HHHHHHHHHHHHHcc
Confidence 333444555555555
No 258
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=28.69 E-value=98 Score=28.18 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=29.8
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
-.+++.++++.+++.|++++.+|++.. ....+.+.|..
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 457899999999999999999998874 44456655544
No 259
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.45 E-value=98 Score=26.22 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=37.9
Q ss_pred ccccCCCCccHHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHcCCCc
Q 043535 506 LGIKDPCRPGLKKAVEDCQYAGVNIKM-ITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 506 i~~~D~~r~~~~~~I~~l~~~Gi~v~~-~TGd~~~~a~~ia~~~gi~~ 552 (881)
+.+.+...+.+.+..+.|++.|+++.+ ..+++...-...|.+.|+..
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~~ 54 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIPY 54 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCE
Confidence 334566778889999999999999987 57777888888899999874
No 260
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.35 E-value=1.5e+02 Score=32.09 Aligned_cols=57 Identities=23% Similarity=0.248 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhhc-----CCEEEEEcCCcc----CHHHHHh------CCccEeeCCCCc--HHHHhhcCeeecc
Q 043535 578 PDDKLAMVKCLKLK-----GHVVAVTGNGIK----DAPALEE------ANVGLSMGIQGT--AVAKESSDIIILD 635 (881)
Q Consensus 578 p~~K~~~v~~l~~~-----g~~v~~iGDg~N----D~~~l~~------A~vgIam~~~~~--~~a~~~ad~vl~~ 635 (881)
|..=..+++.|+.+ |..|+++|-+.. =+.||.. |-|.++-. ... ...-..||+++.-
T Consensus 142 PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs-~T~~l~~~~~~ADIvVsA 215 (297)
T PRK14168 142 PCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHT-RSKNLARHCQRADILIVA 215 (297)
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecC-CCcCHHHHHhhCCEEEEe
Confidence 33334555555554 789999999744 2334433 44555543 222 2344678998863
No 261
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=28.06 E-value=6.7e+02 Score=31.82 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEEeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccc
Q 043535 109 VSIYISVSASSKYMQNKKFEKLLSKVSNSIQVDVVRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHS 181 (881)
Q Consensus 109 i~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~ 181 (881)
+++++++.+...++++++.++.++++ .+.. ..+ +.=++-|....+...|.+|-|.++++..+
T Consensus 86 i~~~i~~~~~i~~~qe~~a~~~l~~L-~~l~-----~~~-----~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 86 ITLAILIVVTVGFVQEYRSEKSLEAL-NKLV-----PPE-----CHLIREGKLEHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHH-hccC-----CCe-----eEEEECCEEEEEEHHHCccCCEEEecCCC
Confidence 33445667777888998887756553 2211 111 11234588889999999999999997543
No 262
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=28.05 E-value=1.6e+02 Score=27.83 Aligned_cols=82 Identities=9% Similarity=0.114 Sum_probs=57.2
Q ss_pred HHHHhcchhhhhhhhccCCCC-cccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-E-EEEEcCCC------HHHH
Q 043535 471 QGMAAGSLQCLAFAHKQVPVP-EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-N-IKMITGDN------IFTA 541 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~-~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~-v~~~TGd~------~~~a 541 (881)
.-+...|++|+.++...-.++ .+...+.+-.++|+-...-...+.+++.+++|++.|. + .+++-|.. +...
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 445678999988875432110 1122345677889988888999999999999999965 2 35555654 4556
Q ss_pred HHHHHHcCCCc
Q 043535 542 KAIATQCGILK 552 (881)
Q Consensus 542 ~~ia~~~gi~~ 552 (881)
..-++++|++.
T Consensus 105 ~~~l~~~G~~~ 115 (137)
T PRK02261 105 EKKFKEMGFDR 115 (137)
T ss_pred HHHHHHcCCCE
Confidence 67888999875
No 263
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=28.03 E-value=3.3e+02 Score=29.48 Aligned_cols=163 Identities=13% Similarity=0.106 Sum_probs=89.3
Q ss_pred EeCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCCCc---------------cc---c
Q 043535 434 WKGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPVPE---------------EE---L 495 (881)
Q Consensus 434 ~KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---------------~~---~ 495 (881)
.-|.|..+.+....- +-.....+=-.-......++++.++||.++.++.+.-++-. .+ .
T Consensus 73 AHGv~~~~~~~~~~~---g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~ 149 (298)
T PRK01045 73 AHGVSPAVREEAKER---GLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAK 149 (298)
T ss_pred CCCCCHHHHHHHHHC---CCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhh
Confidence 347666666544321 11111112223456778889999999999999977655410 00 0
Q ss_pred cc-cCceeeeeccccCCCCccHHHHHHHHHhCCCEE--------EEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHH
Q 043535 496 NE-ENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNI--------KMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEK 566 (881)
Q Consensus 496 ~e-~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v--------~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~ 566 (881)
++ .+..-++++.-.-..+++..+.++.+++..-.+ +..|-+..+.+..+|+++...-
T Consensus 150 l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi-------------- 215 (298)
T PRK01045 150 LEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI-------------- 215 (298)
T ss_pred cccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE--------------
Confidence 10 111234555545555556666666666544222 3345556666666666555432
Q ss_pred HhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHH-hCCccEeeC
Q 043535 567 VEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNG-IKDAPALE-EANVGLSMG 618 (881)
Q Consensus 567 ~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg-~ND~~~l~-~A~vgIam~ 618 (881)
|...-...+-.++.+..++.+..+..|.+- --|...|+ ...|||.-|
T Consensus 216 -----VVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 216 -----VVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred -----EECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 444444455566777777777667776543 22445565 335788776
No 264
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=27.66 E-value=5.2e+02 Score=27.94 Aligned_cols=84 Identities=24% Similarity=0.254 Sum_probs=49.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh-
Q 043535 512 CRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL- 590 (881)
Q Consensus 512 ~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~- 590 (881)
.-.|+...+.+. +..+++=|..+++...+|+..+++.- ..+ .-..-|.|-..=+-.+++
T Consensus 88 si~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VPVi--NgL--------------tD~~HP~Q~LADl~Ti~E~ 147 (310)
T COG0078 88 SIKDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVPVI--NGL--------------TDEFHPCQALADLMTIKEH 147 (310)
T ss_pred cHHHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCceE--ccc--------------ccccCcHHHHHHHHHHHHh
Confidence 334455555544 55689999999999999999998741 110 011235554333333333
Q ss_pred ----cCCEEEEEcCCccCHH--HHHhCCccE
Q 043535 591 ----KGHVVAVTGNGIKDAP--ALEEANVGL 615 (881)
Q Consensus 591 ----~g~~v~~iGDg~ND~~--~l~~A~vgI 615 (881)
.|.+++++|||.|=+. |+-.|-.|+
T Consensus 148 ~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~ 178 (310)
T COG0078 148 FGSLKGLKLAYVGDGNNVANSLLLAAAKLGM 178 (310)
T ss_pred cCcccCcEEEEEcCcchHHHHHHHHHHHhCC
Confidence 3679999999955433 334443443
No 265
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=27.48 E-value=1.8e+02 Score=30.23 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=33.5
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCc
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~ 552 (881)
.+...+.|++|+++||+|-++= |+.......|+++|-+.
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 4678899999999999987776 78888888999999875
No 266
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=26.67 E-value=2.1e+02 Score=29.75 Aligned_cols=69 Identities=17% Similarity=0.254 Sum_probs=46.2
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHH----------HHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHH
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTA----------KAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKL 582 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a----------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 582 (881)
++-.++-|+.+|++||.| .||+..... ...|+++|+..-++.+ -+..+++++|.
T Consensus 40 ~~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~IEiS~--------------G~~~i~~~~~~ 103 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEAVEISD--------------GSMEISLEERC 103 (237)
T ss_pred HHHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCEEEEcC--------------CccCCCHHHHH
Confidence 445889999999999776 588743332 2255666665422111 24567788899
Q ss_pred HHHHHHhhcCCEEEE
Q 043535 583 AMVKCLKLKGHVVAV 597 (881)
Q Consensus 583 ~~v~~l~~~g~~v~~ 597 (881)
++|+..+++|-.|..
T Consensus 104 rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 104 NLIERAKDNGFMVLS 118 (237)
T ss_pred HHHHHHHhCCCeEec
Confidence 999999988777654
No 267
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=26.54 E-value=2.7e+02 Score=35.63 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=28.4
Q ss_pred HHHHHHHHH----hCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 043535 516 LKKAVEDCQ----YAGVNIKMITGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 516 ~~~~I~~l~----~~Gi~v~~~TGd~~~~a~~ia~~~gi~ 551 (881)
.++.++.++ +..+-+++.||++...+..+.++.|++
T Consensus 789 l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp 828 (1050)
T TIGR02468 789 IKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLN 828 (1050)
T ss_pred HHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCC
Confidence 344455565 233778999999999999999999997
No 268
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=25.92 E-value=1e+02 Score=32.98 Aligned_cols=162 Identities=14% Similarity=0.150 Sum_probs=84.1
Q ss_pred eCCHHHHHHhccccccCCCceecCChHHHHHHHHHHHHHHhcchhhhhhhhccCCC--------C-c-------ccc---
Q 043535 435 KGAAEIILAMCSSYYDASGNVKHLEVGARERFEQIIQGMAAGSLQCLAFAHKQVPV--------P-E-------EEL--- 495 (881)
Q Consensus 435 KGa~e~i~~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~rvl~~a~k~l~~--------~-~-------~~~--- 495 (881)
-|.|..+.+..... +-.....+=-.-....+..++++++||.++.++.+.-++ . + .++
T Consensus 72 HGv~~~~~~~l~~~---g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~ 148 (281)
T PF02401_consen 72 HGVPPEVYEELKER---GLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEK 148 (281)
T ss_dssp T---HHHHHHHHHT---TEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHH
T ss_pred CCCCHHHHHHHHHc---CCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcc
Confidence 36666666554321 111222233345677888999999999999999765443 0 0 000
Q ss_pred -cccCceeeeeccccCCCCccHHHHHHHHHhCCCEEE--------EEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHH
Q 043535 496 -NEENLILLGLLGIKDPCRPGLKKAVEDCQYAGVNIK--------MITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEK 566 (881)
Q Consensus 496 -~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi~v~--------~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~ 566 (881)
...+..-++++.=.-...++..+.++.|++..-... -.|-+..+.+..+|+++.+.-
T Consensus 149 l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~mi-------------- 214 (281)
T PF02401_consen 149 LPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAMI-------------- 214 (281)
T ss_dssp GGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEEE--------------
T ss_pred cCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEEE--------------
Confidence 011122344444444555566666666665544433 223344444444544444322
Q ss_pred HhhheeeeccCHHHHHHHHHHHhhcCCEEEEEcCCccCH--HHHHhC-CccEeeCC
Q 043535 567 VEKIYVMARASPDDKLAMVKCLKLKGHVVAVTGNGIKDA--PALEEA-NVGLSMGI 619 (881)
Q Consensus 567 ~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~iGDg~ND~--~~l~~A-~vgIam~~ 619 (881)
|...-...+-.++.+..++.+..+..|.+ ..|+ .+|+.+ .|||.-|.
T Consensus 215 -----VIGg~~SsNT~kL~eia~~~~~~t~~Ie~-~~el~~~~l~~~~~VGItaGA 264 (281)
T PF02401_consen 215 -----VIGGKNSSNTRKLAEIAKEHGKPTYHIET-ADELDPEWLKGVKKVGITAGA 264 (281)
T ss_dssp -----EES-TT-HHHHHHHHHHHHCTTCEEEESS-GGG--HHHHTT-SEEEEEE-T
T ss_pred -----EecCCCCccHHHHHHHHHHhCCCEEEeCC-ccccCHhHhCCCCEEEEEccC
Confidence 55666667788889999999888888855 3454 467766 78888773
No 269
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=25.60 E-value=56 Score=35.30 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=29.3
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCCc
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKA-IATQCGILK 552 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~-ia~~~gi~~ 552 (881)
-+++...-+.|++.|.+++++|.+....+.. ..+.++...
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~~ 102 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQG 102 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhCc
Confidence 4567778899999999999999887555543 455555543
No 270
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=25.07 E-value=6.8e+02 Score=29.59 Aligned_cols=208 Identities=15% Similarity=0.107 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-h------hhcCCceEE----EeCCEEEEEeccccccCcEEEEcCCCeeccc
Q 043535 105 LFIAVSIYISVSASSKYMQNKKFEKLLS-K------VSNSIQVDV----VRNKRRQQILLSNVVVGDVICLKIGDQVPAD 173 (881)
Q Consensus 105 ~~~~i~~~~~i~~~~~~~~~~~~~~~l~-~------~~~~~~v~V----~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD 173 (881)
+++.+++...++...+++.++..+++.+ . +.+....++ ++-|....+...|.+|.|-+.++. + .-+|
T Consensus 24 i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g-~-~~vd 101 (536)
T TIGR01512 24 LLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG-T-STVD 101 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeC-c-EEEE
Confidence 3344455667788888888888777543 1 111212222 346888999999999999999984 3 3477
Q ss_pred eeEEeccceeeecCCccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCCC-ccChHHHHHHHHHHH
Q 043535 174 GIFLDGHSLQIQESDHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNTS-EWTLLKARVRKLTSL 252 (881)
Q Consensus 174 ~~ll~g~~l~vdes~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~-~~~~l~~~~~~~~~~ 252 (881)
--.+.|++..+.-... -... .|..+..|+....-...+.=+..|.= .+..+.....+. -...+++..+.+...
T Consensus 102 es~lTGEs~pv~k~~g-~~v~--aGt~v~~G~~~~~V~~~g~~t~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (536)
T TIGR01512 102 ESALTGESVPVEKAPG-DEVF--AGAINLDGVLTIVVTKLPADSTIAKI---VNLVEEAQSRKAKTQRFIDRFARYYTPV 175 (536)
T ss_pred ecccCCCCCcEEeCCC-CEEE--eeeEECCceEEEEEEEeccccHHHHH---HHHHHHHhhCCChHHHHHHHHHHHHHHH
Confidence 7777787754433211 1122 55566677665543223333333322 233332222222 223345555555554
Q ss_pred HHHHHHHHHHHH---------HHHHhhHH-HHHHhhccccchHHHHHHHHHHH------------HHHhhccccccCchh
Q 043535 253 VDLIGLAITFSG---------LLMILDLN-AVVNLIIPEGLPLAVTVTIAYSM------------KRLMIDHAMVRKLSA 310 (881)
Q Consensus 253 ~~~i~l~~~~~~---------~~~~~~~~-~~l~i~iP~~L~~~~~~~~~~~~------------~~l~~~~ilvk~~~~ 310 (881)
...++++..+.. +....... ...-...|.+.|+++..+..... .++.+-+.+|-+-.-
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTG 255 (536)
T TIGR01512 176 VLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTG 255 (536)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCC
Confidence 443333222211 11233322 22233456666666666665433 445555566655544
Q ss_pred hhhccceEEE
Q 043535 311 CETMGSATVI 320 (881)
Q Consensus 311 ~e~lg~v~~i 320 (881)
--+-|+.++.
T Consensus 256 TLT~~~~~v~ 265 (536)
T TIGR01512 256 TLTTGRPKVV 265 (536)
T ss_pred CCcCCceEEE
Confidence 4444555544
No 271
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.05 E-value=2e+02 Score=30.96 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=28.7
Q ss_pred cCCCCccHHHHHHHHHhC-CCE---EEEEcCCCHHHHHH------HHHHcCCCc
Q 043535 509 KDPCRPGLKKAVEDCQYA-GVN---IKMITGDNIFTAKA------IATQCGILK 552 (881)
Q Consensus 509 ~D~~r~~~~~~I~~l~~~-Gi~---v~~~TGd~~~~a~~------ia~~~gi~~ 552 (881)
.++++++.++.++.+++. |++ .++.-||++....+ .++++|+..
T Consensus 12 a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~ 65 (283)
T PRK14192 12 AKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDS 65 (283)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeE
Confidence 345677778888888766 554 35666777665533 567777765
No 272
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=24.97 E-value=1.2e+02 Score=28.47 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=56.6
Q ss_pred HHHHhcchhhhhhhhccCCCC-cccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EE-EEEcCCCHHHHHHHHHH
Q 043535 471 QGMAAGSLQCLAFAHKQVPVP-EEELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NI-KMITGDNIFTAKAIATQ 547 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~-~~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~~~~a~~ia~~ 547 (881)
..+...|+.|+-.....-++. -+...+.+-..+|+-++...-.+..++.++.|+++|. ++ +++-|-.+..-..-.++
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~ 103 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKE 103 (132)
T ss_pred HHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHH
Confidence 445677888776664322111 1223356778999999999999999999999999987 44 55555455555566888
Q ss_pred cCCCc
Q 043535 548 CGILK 552 (881)
Q Consensus 548 ~gi~~ 552 (881)
+|++.
T Consensus 104 ~Gvd~ 108 (132)
T TIGR00640 104 MGVAE 108 (132)
T ss_pred CCCCE
Confidence 99976
No 273
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=24.78 E-value=6.8e+02 Score=31.84 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhcC-------CceEE----EeCCEEEEEeccccccCcEE
Q 043535 100 AFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSK------VSNS-------IQVDV----VRNKRRQQILLSNVVVGDVI 162 (881)
Q Consensus 100 ~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~------~~~~-------~~v~V----~Rdg~~~~I~~~~Lv~GDII 162 (881)
..++.+++.+++..+++.+.+++.++..+++.+. .... ....| +.-|....+..-|.+|-|.+
T Consensus 112 ~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~ 191 (903)
T PRK15122 112 TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVR 191 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEE
Confidence 4555666777778888999999888877774331 1111 11222 23588889999999999998
Q ss_pred EEcCCCeeccceeEEeccce
Q 043535 163 CLKIGDQVPADGIFLDGHSL 182 (881)
Q Consensus 163 ~l~~G~~vPaD~~ll~g~~l 182 (881)
.++.++ +=+|=-.+.|++.
T Consensus 192 li~g~~-l~VDES~LTGES~ 210 (903)
T PRK15122 192 LIESRD-LFISQAVLTGEAL 210 (903)
T ss_pred EEEcCc-eEEEccccCCCCc
Confidence 887432 3455555555553
No 274
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=24.69 E-value=59 Score=32.52 Aligned_cols=29 Identities=28% Similarity=0.311 Sum_probs=23.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEcCCCHH
Q 043535 511 PCRPGLKKAVEDCQYAGVNIKMITGDNIF 539 (881)
Q Consensus 511 ~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~ 539 (881)
++-||+.+++++|.+.|..++++|++...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56789999999999999999988888653
No 275
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=24.22 E-value=1.1e+02 Score=29.69 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=28.2
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIA 545 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia 545 (881)
.+++..++++.++.|++++-+||++--....++
T Consensus 122 S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 122 SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 568999999999999999999999876555554
No 276
>PRK04980 hypothetical protein; Provisional
Probab=24.11 E-value=82 Score=28.07 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=32.5
Q ss_pred CceEEEeCCEEEEEeccccccCcEEEEc--CCCeeccceeEEeccceeeec
Q 043535 138 IQVDVVRNKRRQQILLSNVVVGDVICLK--IGDQVPADGIFLDGHSLQIQE 186 (881)
Q Consensus 138 ~~v~V~Rdg~~~~I~~~~Lv~GDII~l~--~G~~vPaD~~ll~g~~l~vde 186 (881)
.+..-+||+. .+..+|||++.|. .+.+.-|+..+++-+....++
T Consensus 19 kKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~e 64 (102)
T PRK04980 19 RKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDE 64 (102)
T ss_pred CceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhh
Confidence 3444556642 3579999999997 788899999999877655544
No 277
>PRK08508 biotin synthase; Provisional
Probab=23.82 E-value=5.4e+02 Score=27.50 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=54.2
Q ss_pred CCCCccHHHHHHHHHhCC--CEEEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHH
Q 043535 510 DPCRPGLKKAVEDCQYAG--VNIKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 510 D~~r~~~~~~I~~l~~~G--i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 587 (881)
|+.-+...+.++.+++.+ +.++...|..........++.|++.....-.+. .+..++ +....+++++.+.++.
T Consensus 71 ~~~~e~~~ei~~~ik~~~p~l~i~~s~G~~~~e~l~~Lk~aGld~~~~~lEt~---~~~~~~--i~~~~~~~~~l~~i~~ 145 (279)
T PRK08508 71 DKKLEYVAEAAKAVKKEVPGLHLIACNGTASVEQLKELKKAGIFSYNHNLETS---KEFFPK--ICTTHTWEERFQTCEN 145 (279)
T ss_pred cccHHHHHHHHHHHHhhCCCcEEEecCCCCCHHHHHHHHHcCCCEEcccccch---HHHhcC--CCCCCCHHHHHHHHHH
Confidence 333456678888888764 566667888777777777788886532211111 122222 3334567889999998
Q ss_pred HhhcCCEE---EEEcCCcc
Q 043535 588 LKLKGHVV---AVTGNGIK 603 (881)
Q Consensus 588 l~~~g~~v---~~iGDg~N 603 (881)
.++.|-.| +++|-|-+
T Consensus 146 a~~~Gi~v~sg~I~GlGEt 164 (279)
T PRK08508 146 AKEAGLGLCSGGIFGLGES 164 (279)
T ss_pred HHHcCCeecceeEEecCCC
Confidence 88887544 34455443
No 278
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=23.49 E-value=1.2e+03 Score=29.53 Aligned_cols=111 Identities=11% Similarity=0.081 Sum_probs=65.1
Q ss_pred CcHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hh------cCC
Q 043535 73 ESFFSFVVDTFKSFTVLILFVCAILS-LAFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSK-------VS------NSI 138 (881)
Q Consensus 73 ~~~~~~l~~~f~~~~~~~ll~~ail~-~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~-------~~------~~~ 138 (881)
..++..|.+-|.-...+...+..++. +..+..+++.+++..+++.+.+++.++..+++.+. .+ +..
T Consensus 61 ~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~ 140 (867)
T TIGR01524 61 RLLIRAFNNPFIYILAMLMGVSYLTDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGS 140 (867)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCe
Confidence 34555554444433322222222323 33445666677777888889998888776663221 12 122
Q ss_pred ceEE----EeCCEEEEEeccccccCcEEEEcCCCeeccceeEEeccceee
Q 043535 139 QVDV----VRNKRRQQILLSNVVVGDVICLKIGDQVPADGIFLDGHSLQI 184 (881)
Q Consensus 139 ~v~V----~Rdg~~~~I~~~~Lv~GDII~l~~G~~vPaD~~ll~g~~l~v 184 (881)
...| +.-|....+..-|.+|-|.+.++. +-+=+|=-.+.|++..+
T Consensus 141 ~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g-~~l~VDES~LTGES~PV 189 (867)
T TIGR01524 141 MDEVPIDALVPGDLIELAAGDIIPADARVISA-RDLFINQSALTGESLPV 189 (867)
T ss_pred EEEEEhhcCCCCCEEEECCCCEEcccEEEEec-CceEEEcccccCCCCcc
Confidence 2222 224788899999999999998874 33456777777776544
No 279
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=23.45 E-value=3.4e+02 Score=27.30 Aligned_cols=38 Identities=16% Similarity=0.001 Sum_probs=25.7
Q ss_pred cHHHHHHHHHhCCCEEEEEc-------CC------CHHHHHHHHHHcCCCc
Q 043535 515 GLKKAVEDCQYAGVNIKMIT-------GD------NIFTAKAIATQCGILK 552 (881)
Q Consensus 515 ~~~~~I~~l~~~Gi~v~~~T-------Gd------~~~~a~~ia~~~gi~~ 552 (881)
|..-++..+++.|.+|.-++ ++ +.+.+...|+.+|++.
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl 61 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPL 61 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcE
Confidence 44556667777777754443 22 5678888999999875
No 280
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=23.29 E-value=1.1e+02 Score=23.91 Aligned_cols=27 Identities=26% Similarity=0.190 Sum_probs=20.9
Q ss_pred cCCceEEEeCCEEEEEeccccccCcEEEE
Q 043535 136 NSIQVDVVRNKRRQQILLSNVVVGDVICL 164 (881)
Q Consensus 136 ~~~~v~V~Rdg~~~~I~~~~Lv~GDII~l 164 (881)
....|.| ||+...-+...|.+||.|.+
T Consensus 32 ~~G~V~V--Ng~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 32 QENEVLV--NGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred HcCCEEE--CCEEccCCCCCCCCCCEEEe
Confidence 3345555 89887778899999999976
No 281
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=23.24 E-value=1.2e+02 Score=32.63 Aligned_cols=48 Identities=19% Similarity=0.258 Sum_probs=40.2
Q ss_pred eeccccCCCCccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH---HcCCC
Q 043535 504 GLLGIKDPCRPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIAT---QCGIL 551 (881)
Q Consensus 504 G~i~~~D~~r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~---~~gi~ 551 (881)
|++-..+.+-|++.++++.|++.|-++.++|-....+-...++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7777889999999999999999999999999888777766655 45554
No 282
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=22.90 E-value=2.8e+02 Score=35.93 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhcCCceEE-----EeCCEEEEEeccccccCcEEEEcCC
Q 043535 99 LAFGLNLFIAVSIYISVSASSKYMQNKKFEKLLSK------VSNSIQVDV-----VRNKRRQQILLSNVVVGDVICLKIG 167 (881)
Q Consensus 99 ~~~~~~~~~~i~~~~~i~~~~~~~~~~~~~~~l~~------~~~~~~v~V-----~Rdg~~~~I~~~~Lv~GDII~l~~G 167 (881)
...+..+++++++..+++.+.+++.++..+++.+. .....+... +-=|....+..-|.+|-|...++.+
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~ 160 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETK 160 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeC
Confidence 34455666777777788888888888887773321 111111111 1236777888888888888888743
Q ss_pred CeeccceeEEeccce
Q 043535 168 DQVPADGIFLDGHSL 182 (881)
Q Consensus 168 ~~vPaD~~ll~g~~l 182 (881)
.+=+|=-.|.|++.
T Consensus 161 -~L~VDES~LTGES~ 174 (1053)
T TIGR01523 161 -NFDTDEALLTGESL 174 (1053)
T ss_pred -ceEEEchhhcCCCC
Confidence 34445445555543
No 283
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=22.69 E-value=3.2e+02 Score=30.01 Aligned_cols=85 Identities=18% Similarity=0.282 Sum_probs=63.8
Q ss_pred eccccCCCCccHHHHHHHHH-hCCCEEEEEcCCC--HHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHH
Q 043535 505 LLGIKDPCRPGLKKAVEDCQ-YAGVNIKMITGDN--IFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDK 581 (881)
Q Consensus 505 ~i~~~D~~r~~~~~~I~~l~-~~Gi~v~~~TGd~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 581 (881)
.++|+|+-|-+...++.+.- +.|+.+.+--..= .+.++.+++.+|+++-+ ....-.+.+-+.|++-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl~-----------~anEG~lv~~V~~~~a 287 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPLE-----------LANEGKLVIAVPPEHA 287 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHHH-----------hhcCceEEEEECHHHH
Confidence 77899999999999987765 5667776665553 67889999999999731 2222336667889988
Q ss_pred HHHHHHHhhcC-CEEEEEcC
Q 043535 582 LAMVKCLKLKG-HVVAVTGN 600 (881)
Q Consensus 582 ~~~v~~l~~~g-~~v~~iGD 600 (881)
.+.++.|++++ .....||-
T Consensus 288 ~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 288 EEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred HHHHHHHHhcCCccceeEEE
Confidence 99999999998 56666664
No 284
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=22.67 E-value=1.3e+03 Score=27.28 Aligned_cols=208 Identities=14% Similarity=0.102 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----hhcC-CceEE----EeCCEEEEEeccccccCcEEEEcCCCeec
Q 043535 104 NLFIAVSIYISVSASSKYMQNKKFEKLLS---K----VSNS-IQVDV----VRNKRRQQILLSNVVVGDVICLKIGDQVP 171 (881)
Q Consensus 104 ~~~~~i~~~~~i~~~~~~~~~~~~~~~l~---~----~~~~-~~v~V----~Rdg~~~~I~~~~Lv~GDII~l~~G~~vP 171 (881)
.+++.+++..+++...+++.++..+++.+ . +++. ...++ ++-|....+..-|.+|-|-+.++. + .=
T Consensus 23 ~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g-~-~~ 100 (556)
T TIGR01525 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISG-E-SE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEec-c-eE
Confidence 44555566777888888888877776432 1 1221 22222 235888999999999999998874 3 35
Q ss_pred cceeEEeccceeeecCCccccccCCCCceeecccEEeeCceeEEEEEEeccchhhHHHhhhccCC-CccChHHHHHHHHH
Q 043535 172 ADGIFLDGHSLQIQESDHNVEVNSSQNPFLLSGTKVVDGYGRMLATAVGMNTTWGQIMRQTSYNT-SEWTLLKARVRKLT 250 (881)
Q Consensus 172 aD~~ll~g~~l~vdes~~~v~~~~~~~~~l~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~l~~~~~~~~ 250 (881)
+|--.+.|++..+.-... -... .|..+..|+....-...+.-++.|.-. +..+.....+ .-...+++..+.+.
T Consensus 101 vdes~lTGEs~pv~k~~g-~~v~--aGt~v~~g~~~~~v~~~g~~t~~~~i~---~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 101 VDESALTGESMPVEKKEG-DEVF--AGTINGDGSLTIRVTKLGEDSTLAQIV---KLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred EeehhccCCCCCEecCCc-CEEe--eceEECCceEEEEEEEecccCHHHHHH---HHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 787888888754443311 1222 566667777665433333333334322 2232222222 22334555556655
Q ss_pred HHHHHHHHHHHHHH--------HHHHhhHHHH-HHhhccccchHHHHHHHHHHH------------HHHhhccccccCch
Q 043535 251 SLVDLIGLAITFSG--------LLMILDLNAV-VNLIIPEGLPLAVTVTIAYSM------------KRLMIDHAMVRKLS 309 (881)
Q Consensus 251 ~~~~~i~l~~~~~~--------~~~~~~~~~~-l~i~iP~~L~~~~~~~~~~~~------------~~l~~~~ilvk~~~ 309 (881)
.....++++..+.. +........+ .-...|.+.|+++..+..... .++.+-+.+|-+-.
T Consensus 175 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKT 254 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254 (556)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCC
Confidence 54444333332222 2333332222 233455566666666655433 44444455555544
Q ss_pred hhhhccceEE
Q 043535 310 ACETMGSATV 319 (881)
Q Consensus 310 ~~e~lg~v~~ 319 (881)
---+-|+.++
T Consensus 255 GTLT~~~~~v 264 (556)
T TIGR01525 255 GTLTTGKPTV 264 (556)
T ss_pred CCCcCCceEE
Confidence 4444455443
No 285
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=22.56 E-value=3.8e+02 Score=28.66 Aligned_cols=61 Identities=21% Similarity=0.309 Sum_probs=34.9
Q ss_pred ccCHHHHHHHHHHHhh--cCCEEEEEcCCcc----CHHHHHhCCccEeeCCCCc---HHHHhhcCeeecc
Q 043535 575 RASPDDKLAMVKCLKL--KGHVVAVTGNGIK----DAPALEEANVGLSMGIQGT---AVAKESSDIIILD 635 (881)
Q Consensus 575 ~~~p~~K~~~v~~l~~--~g~~v~~iGDg~N----D~~~l~~A~vgIam~~~~~---~~a~~~ad~vl~~ 635 (881)
-+||..=..+++...- +|..+..+|-|.- =+.||..++..+.+.-..+ ...-+.||+++.-
T Consensus 137 PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~A 206 (283)
T COG0190 137 PCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVA 206 (283)
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEe
Confidence 3555554444444443 4889999988622 2345666666666542222 2344568888754
No 286
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=22.35 E-value=1e+03 Score=25.78 Aligned_cols=52 Identities=15% Similarity=0.310 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-hhHHHHHHHHHHHHHHHHHHh
Q 043535 654 NIQKFIQFHLTISVSSVLFNFLAAVLVGKNP-LTAVQLLWMNLIVLTLGALAL 705 (881)
Q Consensus 654 ~i~~~i~~~~~~n~~~i~~~~~~~~~~~~~p-l~~~q~l~~~~~~~~~~~l~l 705 (881)
+.++.+.+.+.-|..+++..+++.++.+... +++.-=++-+.+...+..+++
T Consensus 19 ~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~ 71 (296)
T COG1230 19 RNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAI 71 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3455677778888888888888887766332 334433444555444444444
No 287
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.18 E-value=2.7e+02 Score=25.53 Aligned_cols=80 Identities=11% Similarity=0.128 Sum_probs=53.1
Q ss_pred HHHhcchhhhhhhhccCCCCc--ccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-E-EEEEcCCCHHHHHHHHHH
Q 043535 472 GMAAGSLQCLAFAHKQVPVPE--EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-N-IKMITGDNIFTAKAIATQ 547 (881)
Q Consensus 472 ~~~~~g~rvl~~a~k~l~~~~--~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~-v~~~TGd~~~~a~~ia~~ 547 (881)
-+...|++|+..+-. .+.++ +...+.+-.++++-.......+.+++.+++|+++|. + .+++-|..+..-..-.++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 345566666655532 11111 111244566788878888889999999999999977 4 466677666655666778
Q ss_pred cCCCc
Q 043535 548 CGILK 552 (881)
Q Consensus 548 ~gi~~ 552 (881)
.|++.
T Consensus 101 ~G~d~ 105 (122)
T cd02071 101 MGVAE 105 (122)
T ss_pred CCCCE
Confidence 99875
No 288
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.88 E-value=82 Score=28.63 Aligned_cols=81 Identities=20% Similarity=0.340 Sum_probs=55.4
Q ss_pred HHHHhcchhhhhhhhccCCCCc--ccccccCceeeeeccccCCCCccHHHHHHHHHhCCC-EE-EEEcCCCHHHHHHHHH
Q 043535 471 QGMAAGSLQCLAFAHKQVPVPE--EELNEENLILLGLLGIKDPCRPGLKKAVEDCQYAGV-NI-KMITGDNIFTAKAIAT 546 (881)
Q Consensus 471 ~~~~~~g~rvl~~a~k~l~~~~--~~~~e~~l~~lG~i~~~D~~r~~~~~~I~~l~~~Gi-~v-~~~TGd~~~~a~~ia~ 546 (881)
.-+...|++|+.+... .+.++ ....+.+-.++|+-...++--+.+.+.++.+|+.+- ++ +++-|.........++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3455678888665522 22111 112345677888888878888999999999999986 44 6777766555456788
Q ss_pred HcCCCc
Q 043535 547 QCGILK 552 (881)
Q Consensus 547 ~~gi~~ 552 (881)
+.|.+.
T Consensus 100 ~~G~D~ 105 (119)
T cd02067 100 EIGVDA 105 (119)
T ss_pred HcCCeE
Confidence 899864
No 289
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=21.12 E-value=3.1e+02 Score=27.90 Aligned_cols=81 Identities=12% Similarity=0.073 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCCEEE----EEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHh-----hheeeeccCHHHHHHHHHH
Q 043535 517 KKAVEDCQYAGVNIK----MITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVE-----KIYVMARASPDDKLAMVKC 587 (881)
Q Consensus 517 ~~~I~~l~~~Gi~v~----~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~-----~~~v~~~~~p~~K~~~v~~ 587 (881)
..+..-|+.+|..|. ++++.-...+..++..+|..+.. -++++.+... +...|.|+...--..++..
T Consensus 74 sas~iilR~~g~~v~p~t~~Lp~~ir~n~~~l~~~lg~~p~y----veedl~~i~kGalnGRfhpCGRCh~~I~~~V~~k 149 (255)
T COG1365 74 SASAIILRWAGFTVDPGTAILPDHIRRNKEELETLLGEVPEY----VEEDLEDIEKGALNGRFHPCGRCHSMIENAVMDK 149 (255)
T ss_pred HHHHHHHHhhceeeccccccCCHHHhHHHHHHHHHHccCHHH----HHHHHHHHHhhhccCCCCCcchHHHHHHHHHHHH
Confidence 444555777775543 33444456666777777776522 2233333333 4457777777666777788
Q ss_pred HhhcCCEEEEEcCC
Q 043535 588 LKLKGHVVAVTGNG 601 (881)
Q Consensus 588 l~~~g~~v~~iGDg 601 (881)
.++.+-.|.++||+
T Consensus 150 ~re~di~~vafGDl 163 (255)
T COG1365 150 ARELDIDVVAFGDL 163 (255)
T ss_pred HHhcCCeEEEEccc
Confidence 88888899999996
No 290
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=21.07 E-value=1.5e+02 Score=25.43 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=37.8
Q ss_pred eccccC---CCCccHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCCc
Q 043535 505 LLGIKD---PCRPGLKKAVEDCQYAGVNIKMI-TGDNIFTAKAIATQCGILK 552 (881)
Q Consensus 505 ~i~~~D---~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~~a~~ia~~~gi~~ 552 (881)
++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++.
T Consensus 4 Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 4 IIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 445555 56677888999999999998877 6667777888888888864
No 291
>PLN02389 biotin synthase
Probab=20.99 E-value=4.8e+02 Score=29.40 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=55.3
Q ss_pred CccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCCchh--hhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhh
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITGDNIFTAKAIATQCGILKPE--FRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKL 590 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TGd~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 590 (881)
.+...+.++.+++.|+.+....|-.........++.|++... ++. +++ ...+ +....+.+++.+.++..++
T Consensus 152 ~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~~~~LeT-s~~----~y~~--i~~~~s~e~rl~ti~~a~~ 224 (379)
T PLN02389 152 FNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAYNHNLDT-SRE----YYPN--VITTRSYDDRLETLEAVRE 224 (379)
T ss_pred HHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEEEeeecC-ChH----HhCC--cCCCCCHHHHHHHHHHHHH
Confidence 568889999999999998888887777777777888988531 111 121 2222 3345688999999999999
Q ss_pred cCCEE
Q 043535 591 KGHVV 595 (881)
Q Consensus 591 ~g~~v 595 (881)
.|-.|
T Consensus 225 ~Gi~v 229 (379)
T PLN02389 225 AGISV 229 (379)
T ss_pred cCCeE
Confidence 98665
No 292
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=20.67 E-value=93 Score=26.87 Aligned_cols=27 Identities=15% Similarity=0.140 Sum_probs=20.5
Q ss_pred ceEEEeCCEEEEEeccccccCcEEEEc
Q 043535 139 QVDVVRNKRRQQILLSNVVVGDVICLK 165 (881)
Q Consensus 139 ~v~V~Rdg~~~~I~~~~Lv~GDII~l~ 165 (881)
+..+.++|+.+.+.+++|++||.|.+.
T Consensus 73 ~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 344556666678999999999999874
No 293
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=20.37 E-value=6.4e+02 Score=27.05 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHhcchhhhhhhhccCCCCc---------------ccccccCc---eeeeeccccCCCCccHHHHHHHHH
Q 043535 463 RERFEQIIQGMAAGSLQCLAFAHKQVPVPE---------------EELNEENL---ILLGLLGIKDPCRPGLKKAVEDCQ 524 (881)
Q Consensus 463 ~~~~~~~~~~~~~~g~rvl~~a~k~l~~~~---------------~~~~e~~l---~~lG~i~~~D~~r~~~~~~I~~l~ 524 (881)
-.......++++++||.++.++.+.-++-. .++. .++ .=++++.=.-...++..+.++.++
T Consensus 102 V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~-~~l~~~~kv~~vsQTT~~~~~~~~iv~~l~ 180 (281)
T PRK12360 102 VKKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEV-ENIPFLDKACVVAQTTIIPELWEDILNVIK 180 (281)
T ss_pred chHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHH-hhCccccCEEEEECCCCcHHHHHHHHHHHH
Confidence 456777889999999999999977655410 0000 011 224444444455556666666666
Q ss_pred hCCCE------EEEEcCCCHHHHHHHHHHcCCCchhhhcCCHHHHHHHHhhheeeeccCHHHHHHHHHHHhhcCCEEEEE
Q 043535 525 YAGVN------IKMITGDNIFTAKAIATQCGILKPEFRNYTEEEKMEKVEKIYVMARASPDDKLAMVKCLKLKGHVVAVT 598 (881)
Q Consensus 525 ~~Gi~------v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~i 598 (881)
+..-+ ++-.|-+..+.+..+|+++.+.- |...-...+-.++.+..++.+..+..|
T Consensus 181 ~~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~mi-------------------VVGg~~SsNT~rL~eia~~~~~~t~~I 241 (281)
T PRK12360 181 LKSKELVFFNTICSATKKRQESAKELSKEVDVMI-------------------VIGGKHSSNTQKLVKICEKNCPNTFHI 241 (281)
T ss_pred HhCcccccCCCcchhhhhHHHHHHHHHHhCCEEE-------------------EecCCCCccHHHHHHHHHHHCCCEEEE
Confidence 54433 23345555566666666555432 444444455566777777777666666
Q ss_pred cCC-ccCHHHHHhC-CccEeeC
Q 043535 599 GNG-IKDAPALEEA-NVGLSMG 618 (881)
Q Consensus 599 GDg-~ND~~~l~~A-~vgIam~ 618 (881)
.+- .-|...|+.+ .|||.-|
T Consensus 242 e~~~el~~~~~~~~~~VGitaG 263 (281)
T PRK12360 242 ETADELDLEMLKDYKIIGITAG 263 (281)
T ss_pred CChHHCCHHHhCCCCEEEEEcc
Confidence 442 3355667643 5788776
No 294
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=20.31 E-value=84 Score=30.52 Aligned_cols=23 Identities=26% Similarity=0.541 Sum_probs=20.4
Q ss_pred CccHHHHHHHHHhCCCEEEEEcC
Q 043535 513 RPGLKKAVEDCQYAGVNIKMITG 535 (881)
Q Consensus 513 r~~~~~~I~~l~~~Gi~v~~~TG 535 (881)
.+++.++|+++++.|++++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999984
No 295
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.19 E-value=1.5e+02 Score=24.58 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=34.8
Q ss_pred cccCCCCccHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCC
Q 043535 507 GIKDPCRPGLKKAVEDCQYAGVNIKMI-TGDNIFTAKAIATQCGIL 551 (881)
Q Consensus 507 ~~~D~~r~~~~~~I~~l~~~Gi~v~~~-TGd~~~~a~~ia~~~gi~ 551 (881)
...+..++.+.+..++|+++|+++.+- .+++.......|+..|+.
T Consensus 8 ~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 8 PLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 345556777888899999999998774 445777778888888875
Done!