BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043543
         (381 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
           GN=At1g04910 PE=1 SV=1
          Length = 519

 Score =  231 bits (589), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 211/387 (54%), Gaps = 35/387 (9%)

Query: 2   VAVAHIMNATLVIPQLDKRSFWKDSSTFSDMFDEVHFIKTLRGDLRIAKELP-------- 53
           V  A IMNATLV+P+LD  SFW D S F  ++D  HFI+TL+ D++I  ++P        
Sbjct: 111 VLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKT 170

Query: 54  KELES--VPRARKHFTSWSGVGYYEEMTQLFKEYQVIHVAKSDSRLANNDLPLDIQRLRC 111
           K++++  +   R     W    Y     +  +E+  I++     RLA      + QRLRC
Sbjct: 171 KKIKAFQIRPPRDAPIEW----YLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRC 226

Query: 112 RALYYALRFSPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKEL 171
           R  Y+ALRF P I  L E +V++LRS  G ++++HLR+E DML+F GC       E K L
Sbjct: 227 RVNYHALRFKPHIMKLSESIVDKLRS-QGHFMSIHLRFEMDMLAFAGCFDIFNPEEQKIL 285

Query: 172 TIMRENTNHWKVKKINSTEQRIGGYCPLTPKEVGIFLQALGYPPSTIIYIAAGEIYGGNT 231
              R+   ++  K++   E+R  G CPLTP+EVG+ L+A+ +  ST IY+AAGE++GG  
Sbjct: 286 RKYRKE--NFADKRLIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQ 343

Query: 232 HLSELMYRFPNLVFKETLATKEELKAFANHASQTAALDYLISVESDVFIPSHSG--NMAR 289
            +      FP L    ++   EEL A  +     +A+DY++ + SD+F+P++ G  N A 
Sbjct: 344 FMKPFRTLFPRLDNHSSVDPSEELSA-TSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFAN 402

Query: 290 AVEGHRRFLGHRKTITPDRRGLVELFDKLKSGKLREGPSFSQRVQQIHENWQGGPRKRKG 349
            + GHR + G R TI PDR+ L  +F   + GK R G   + R   +  N+ GGP KR  
Sbjct: 403 NLLGHRLYYGFRTTIRPDRKALAPIFIAREKGK-RAGFEEAVRRVMLKTNF-GGPHKRVS 460

Query: 350 PLPGIKGRARFRTEESFYENPYPECIC 376
           P             ESFY N +PEC C
Sbjct: 461 P-------------ESFYTNSWPECFC 474


>sp|Q00248|PDI_ASPOR Protein disulfide-isomerase OS=Aspergillus oryzae (strain ATCC
           42149 / RIB 40) GN=pdiA PE=3 SV=1
          Length = 515

 Score = 33.1 bits (74), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 75  YEEMTQLFKEYQVIHVAKSDSRLANNDLPLDIQRLRCRALYYALRFSPPIEILGEKLVER 134
           YEE+  L+K+   + +AK D+    ND+P  I       L+ A     P+E  G + VE 
Sbjct: 403 YEELASLYKDIPEVTIAKIDATA--NDVPDSITGFPTIKLFAAGAKDSPVEYEGSRTVED 460

Query: 135 LRSL 138
           L + 
Sbjct: 461 LANF 464


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.137    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,707,324
Number of Sequences: 539616
Number of extensions: 6131411
Number of successful extensions: 14012
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 14005
Number of HSP's gapped (non-prelim): 4
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)