BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043544
(619 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B9S2H4|Y232_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0699480
PE=3 SV=1
Length = 578
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/620 (60%), Positives = 461/620 (74%), Gaps = 50/620 (8%)
Query: 1 MDSEQRRKRKRVYRPYSRAQ-YLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVS 59
M+SEQRRKRKR+Y+P S + + S RS+ CL F VFLLF+SSDR PI+ VSF+PVL+V
Sbjct: 1 MESEQRRKRKRIYKPDSTSNSFFSVRSLTACLSFFVFLLFISSDRSPIKTVSFRPVLNVP 60
Query: 60 SLSLLSS--NSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLN 117
+SLL + +DSF KS L +E+RVL PDH+LL+VSNKV +++LDCVY L N
Sbjct: 61 -VSLLPTPLGLTRDSFDT--KSLPLIVEDRVLLPDHVLLIVSNKVATSQNLDCVYSNLYN 117
Query: 118 DSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLM 177
+ DV ++P SV++Y + I RC LPP NYSA V LR +A +
Sbjct: 118 --------SHDVVLKPALSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEA-----AEGV 164
Query: 178 NNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGF 237
+V WD++ Y A+LD T VFVKGLNLRPH+ESD + FRC FGL ++KDEG
Sbjct: 165 AAAAPASVVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDSSKFRCHFGLSKFDKDEGI 224
Query: 238 AFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAV--VNVNDKALDDRKPVTSVAGIRN 295
F TEA+ AAQEV+RCLLPRSI NP KA+GIRV V +N + +D
Sbjct: 225 VFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTVSRINAGEDGVD------------- 271
Query: 296 SRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIM 355
+PSVA+++ +KS+++R GK+ELC CTMLWNQAS + EWI
Sbjct: 272 ----------------APLPSVAKVYGAKSYEKRSNRGKYELCACTMLWNQASFLHEWIT 315
Query: 356 YHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNE 415
YHAWLGV+RWFIYDNNSDDGIQ+V++ELNL+NYNV+RH+WPWIK QEAGFSHCAL AR+E
Sbjct: 316 YHAWLGVQRWFIYDNNSDDGIQEVVDELNLQNYNVTRHSWPWIKAQEAGFSHCALRARSE 375
Query: 416 CKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSH 475
CKW+GFFDVDEFFY PR +LGENSLR+LVAN+S S T AEIRT CHSFGPSGL+S
Sbjct: 376 CKWLGFFDVDEFFYLPRHRGQDMLGENSLRTLVANYSDSSTYAEIRTICHSFGPSGLTSA 435
Query: 476 PAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHY 535
P+QGVTVGYTCRLQ+PERHKSIVRP+LL+++LLNVVHHF+LK GYRYLN+PE+ AV+NHY
Sbjct: 436 PSQGVTVGYTCRLQAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVPESTAVVNHY 495
Query: 536 KYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGL 595
KYQVW+TF+AKFFRRV+TYV +WQE+QN GSKDRAPGLGT AIEPP+WRL+FCEVWDTGL
Sbjct: 496 KYQVWDTFKAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLRFCEVWDTGL 555
Query: 596 RDFVLSTFADPATESLPWER 615
+DFVL+ FAD A+ LPWER
Sbjct: 556 KDFVLANFADTASGYLPWER 575
>sp|Q94K98|Y1720_ARATH UPF0392 protein At1g27200 OS=Arabidopsis thaliana GN=At1g27200 PE=2
SV=2
Length = 575
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/621 (54%), Positives = 429/621 (69%), Gaps = 61/621 (9%)
Query: 4 EQRRKRKRVYRPYSRAQYLSGRSVILCLCFLVFLLFL-SSDR---LPIRPVSFKPVLSVS 59
E +KRK + + Q+LS R +ILC C LLF SSDR L +R S +P L V
Sbjct: 5 ENGKKRKVRNKQQVKVQFLSQRYLILCFCCFFVLLFFLSSDRISTLSVRSDSLRPSLRVP 64
Query: 60 SLSLLSSNSIQDSF-RLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTE-SLDCVYYKLLN 117
+LS+LSS+ DSF R F L +E+RV FPDHLLL++S+ + + E +L CVY +
Sbjct: 65 TLSVLSSS--MDSFHRGRFPP--LSVEDRVQFPDHLLLILSHGIGKGEKNLVCVYRGVKE 120
Query: 118 DSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLM 177
++ + P S DE+DEFR I RCP P+NYS+ VDL+ R D +
Sbjct: 121 ETL----------VLPSISSDEFDEFRSIVRCPNAPLNYSSSVDLQFRGDLVKKKM---- 166
Query: 178 NNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGF 237
++ VH W+K+ Y AV+DG T VVFVKGL RPH+ESD + ++CQF + + E+ E
Sbjct: 167 -KKQSRRVHNWEKVGYEAVIDGDTVVVFVKGLTRRPHKESDPSYYKCQFEIENSEEKE-- 223
Query: 238 AFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSR 297
VT+A+AAAQEVVRC LP S+ NP RV+V++++ +
Sbjct: 224 --VTQAIAAAQEVVRCGLPESLKLNPEMM--FRVSVIHIDPRG----------------- 262
Query: 298 YHIQGKNQRLSRDYVSMPSVARIHNSKS--HKQRKGGGKFELCVCTMLWNQASLIREWIM 355
R ++PSVARI+ S S K++K G K ELCVCTMLWNQA +REWIM
Sbjct: 263 -----------RTTPALPSVARIYGSDSIEKKEKKSGVKHELCVCTMLWNQAPFLREWIM 311
Query: 356 YHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNE 415
YH+WLGVERWFIYDNNSDDGIQ+ IE L+ ENYNVSRH WPWIKTQEAGFSHCA+ A+ E
Sbjct: 312 YHSWLGVERWFIYDNNSDDGIQEEIELLSSENYNVSRHVWPWIKTQEAGFSHCAVRAKEE 371
Query: 416 CKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSH 475
C WVGFFDVDEF+YFP GL +N+L+SLV+N++S V EIRT CHS+GPSGL+S
Sbjct: 372 CNWVGFFDVDEFYYFPTHRSQGLPSKNALKSLVSNYTSWDLVGEIRTDCHSYGPSGLTSV 431
Query: 476 PAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHY 535
P+QGVTVGYTCR +PERHKSI+RP+LL SSLLN VHHF+LK G ++++ E++AV+NHY
Sbjct: 432 PSQGVTVGYTCRQANPERHKSIIRPELLTSSLLNEVHHFQLKEGVGHMSLVESVAVVNHY 491
Query: 536 KYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGL 595
KYQVW+TF+AKF+RRVATYVVDWQENQN GSKDRAPGLGTEAIEPP+W+ +FCEVWDTGL
Sbjct: 492 KYQVWDTFKAKFYRRVATYVVDWQENQNQGSKDRAPGLGTEAIEPPDWKRRFCEVWDTGL 551
Query: 596 RDFVLSTFADPATESLPWERH 616
+D V+S FAD T LPW+R
Sbjct: 552 KDLVMSNFADQVTGYLPWQRQ 572
>sp|B9SLR1|Y231_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0530710
PE=3 SV=1
Length = 552
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/542 (45%), Positives = 326/542 (60%), Gaps = 65/542 (11%)
Query: 81 TLKIEERVLFPDHLLLMV----SNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFS 136
++ I E V+ PD +L+ V S+++ E CVY+ + ++T + E +P
Sbjct: 67 SISIRETVMLPDQVLIFVNYPQSSRLFTKEDFSCVYF---SRNSTSLSETQ--LKKPPNQ 121
Query: 137 VDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAV 196
+D D I RCPL P +S ++L+ Y++ H WD + Y A+
Sbjct: 122 IDGTDVNNQIVRCPLNPRGFSVSLELK-----SGGGYIN------PGPTHRWDSLVYEAM 170
Query: 197 LD-GKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWE-KDEGFAFVTEAVAAAQEVVRCL 254
+D T VVFVKG NLR R + + F C +G W+ + F + ++ AQE+VRC
Sbjct: 171 IDRDNTTVVFVKGFNLRADRIYNASKFECVYG---WDFRKTKFVLRSNVISIAQEIVRCQ 227
Query: 255 LPRSISKNPNKAK-GIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVS 313
P SI N K I+V++ ++GK S ++
Sbjct: 228 TPLSILNNQLKVNNAIKVSI-------------------------RLKGKGTLHS---IA 259
Query: 314 MPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSD 373
P V + + +G E+C+CTML NQ ++EW+MYH+ +GVERWFIYDNNS+
Sbjct: 260 RPGVQLL--TDPEPGLRGEKPHEMCICTMLRNQGRFLKEWVMYHSQIGVERWFIYDNNSE 317
Query: 374 DGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRD 433
D I VIE L +N+SRH WPW+K QEAGF+HCAL AR C+WVGF DVDEFF+ P
Sbjct: 318 DDIDSVIESLIDAKFNISRHVWPWVKAQEAGFAHCALRARGLCEWVGFIDVDEFFHLP-- 375
Query: 434 HRLGLLGENSLRSLVANFSSS-KTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPE 492
GL +L+ V N S+S VAE+R SCHSFGPSGL PAQGVTVGYTCR+ PE
Sbjct: 376 --TGL----NLQDAVKNQSNSGNNVAELRVSCHSFGPSGLKHVPAQGVTVGYTCRMMLPE 429
Query: 493 RHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVA 552
RHKSIV+P+ LNS+L+NVVHHF L+ G+RY+N + I VINHYKYQVWE F+ KF+RRVA
Sbjct: 430 RHKSIVKPEALNSTLINVVHHFHLRDGFRYVNADKGILVINHYKYQVWEVFKEKFYRRVA 489
Query: 553 TYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLP 612
TYVVDWQ QN GSKDRAPGLGT A+EPP+W +FCEV DTGLRD +L F DP T+ LP
Sbjct: 490 TYVVDWQNEQNVGSKDRAPGLGTRAVEPPDWSSRFCEVSDTGLRDRILQNFLDPLTDLLP 549
Query: 613 WE 614
W+
Sbjct: 550 WQ 551
>sp|Q6YRM6|Y8219_ORYSJ UPF0392 protein Os08g0121900 OS=Oryza sativa subsp. japonica
GN=Os08g0121900 PE=2 SV=1
Length = 584
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/577 (41%), Positives = 337/577 (58%), Gaps = 72/577 (12%)
Query: 51 SFKPVLSVS----SLSLLSSN-SIQDSFRLTFKSF--TLKIEERVLFPDHLLLMVSNK-- 101
SF+PVL + +L+ +SS Q + ++ + ++ I+ V PDH+LLM+ +
Sbjct: 66 SFRPVLKTAWPSATLNAVSSERGAQQAGMVSVDAVLPSVHIQHAVALPDHVLLMLRDGSL 125
Query: 102 VDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVD 161
+ + +C+Y + ++ +R QP SV + + CP P + V
Sbjct: 126 LPASGQFECLYSPV---------NSSQLRRQP-LSVATLPDGPSLVHCPAGPSRVA--VS 173
Query: 162 LRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGK--TAVVFVKGLNLRPHRESDH 219
L L + P WD++ Y A++D K + VVF KG+NLRP R
Sbjct: 174 LSLAQSVPVAPLQ-------------WDRLVYTALIDSKDNSTVVFAKGMNLRPGRLGVP 220
Query: 220 TLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDK 279
+ + C FG + V+AAQE+ RC+ P I + G + +V N
Sbjct: 221 SRYECVFGRDF--SKPKLVVTSPVVSAAQEIFRCVTPVRIRRYLRMTTGGKNSVNN---- 274
Query: 280 ALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVAR---IHNSKSHKQRKGGGKFE 336
D KP+ + IR R ++PS+A+ + H +RK
Sbjct: 275 ---DDKPM--LVSIRTK-----------GRGSSTLPSIAQPEPLPRYNKHWRRKA---HS 315
Query: 337 LCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWP 396
+CVCTML NQA +REWI+YH+ +GV+RWFIYDNNSDDGI++V+ ++ YNV+R+ WP
Sbjct: 316 MCVCTMLRNQARFLREWIIYHSRIGVQRWFIYDNNSDDGIEEVLNTMDSSRYNVTRYLWP 375
Query: 397 WIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKT 456
W+K+QEAGF+HCAL AR C+WVGF D+DEF +FP G +L+ ++ N+S
Sbjct: 376 WMKSQEAGFAHCALRARESCEWVGFIDIDEFLHFP--------GNQTLQDVLRNYSVKPR 427
Query: 457 VAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRL 516
+ E+RT+CHSFGPSG + P +GVT GYTCRL +PERHKSIVRPD LN SL+NVVHHF L
Sbjct: 428 IGELRTACHSFGPSGRTKIPKKGVTTGYTCRLAAPERHKSIVRPDALNPSLINVVHHFHL 487
Query: 517 KAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTE 576
K G +Y+N+ + + +INHYKYQVWE F+ KF RVATYV DWQ+ +N GS+DRAPGLGT+
Sbjct: 488 KEGMKYVNIGQGMMLINHYKYQVWEVFKDKFSGRVATYVADWQDEENVGSRDRAPGLGTK 547
Query: 577 AIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPW 613
+EP +W +FCEV+D GL+DFV F DP T +LPW
Sbjct: 548 PVEPEDWPRRFCEVYDNGLKDFVQKVFTDPHTGNLPW 584
>sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Homo
sapiens GN=QPRT PE=1 SV=3
Length = 297
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 18/106 (16%)
Query: 151 LPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLN 210
LPPV +A+VD LR D P NY +L++ W K VL G+
Sbjct: 10 LPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAK--SPGVLAGQ---------- 57
Query: 211 LRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEA-VAAAQEVVRCLL 255
P ++ T CQ W EG V A VA + CLL
Sbjct: 58 --PFFDAIFTQLNCQV---SWFLPEGSKLVPVARVAEVRGPAHCLL 98
>sp|Q3T063|NADC_BOVIN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Bos
taurus GN=QPRT PE=2 SV=1
Length = 299
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 18/106 (16%)
Query: 151 LPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLN 210
LPP +A+ D LR D P NY++L++ W K VL G
Sbjct: 10 LPPATLAALADSWLREDCPGLNYVALVSGTAPSQAVLWAK--SPGVLAG----------- 56
Query: 211 LRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEA-VAAAQEVVRCLL 255
RP ++ CQ W EG V A VA + CLL
Sbjct: 57 -RPFLDAIFAQVNCQV---SWFLPEGSKLVPVAKVAEVRGPAHCLL 98
>sp|A7Z4M3|TRMD_BACA2 tRNA (guanine-N(1)-)-methyltransferase OS=Bacillus
amyloliquefaciens (strain FZB42) GN=trmD PE=3 SV=1
Length = 243
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 501 DLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVW---ETFRAKFFRR 550
D ++ LL H+ R A YR L +PE + NH K Q W E+ R F RR
Sbjct: 169 DSFSTGLLEHPHYTR-PADYRGLKVPETLLSGNHAKIQKWRNKESIRRTFLRR 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,586,941
Number of Sequences: 539616
Number of extensions: 9386790
Number of successful extensions: 18647
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 18621
Number of HSP's gapped (non-prelim): 9
length of query: 619
length of database: 191,569,459
effective HSP length: 124
effective length of query: 495
effective length of database: 124,657,075
effective search space: 61705252125
effective search space used: 61705252125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)