Query 043544
Match_columns 619
No_of_seqs 241 out of 945
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 10:06:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 98.7 1.9E-07 6.4E-12 91.1 13.7 94 336-433 2-105 (255)
2 3bcv_A Putative glycosyltransf 98.6 2.9E-07 9.9E-12 88.7 11.1 95 335-433 5-101 (240)
3 2z86_A Chondroitin synthase; G 98.3 4.3E-06 1.5E-10 93.1 14.8 121 334-468 374-496 (625)
4 3ckj_A Putative uncharacterize 98.2 6.6E-06 2.2E-10 85.0 13.0 94 333-432 46-148 (329)
5 1xhb_A Polypeptide N-acetylgal 98.1 2.2E-05 7.5E-10 84.5 14.2 97 335-434 29-132 (472)
6 2d7i_A Polypeptide N-acetylgal 98.0 3.3E-05 1.1E-09 86.1 13.4 106 335-450 112-223 (570)
7 3f1y_A Mannosyl-3-phosphoglyce 97.9 1.7E-05 5.9E-10 84.8 9.0 94 334-433 93-197 (387)
8 4fix_A UDP-galactofuranosyl tr 97.9 3.3E-05 1.1E-09 87.9 11.2 95 334-433 179-285 (657)
9 2z86_A Chondroitin synthase; G 97.8 0.00011 3.7E-09 81.8 13.5 94 335-432 93-190 (625)
10 2ffu_A Ppgalnact-2, polypeptid 97.7 0.00022 7.5E-09 77.6 12.8 95 334-434 65-164 (501)
11 3l7i_A Teichoic acid biosynthe 97.6 9.7E-06 3.3E-10 92.6 0.0 95 336-433 3-100 (729)
12 4hg6_A Cellulose synthase subu 97.1 0.0015 5E-08 75.9 10.6 113 335-462 140-274 (802)
13 2bo4_A Mannosylglycerate synth 96.7 0.0058 2E-07 65.6 10.8 63 363-427 29-104 (397)
14 2nxv_A ATP synthase subunits r 96.6 0.0055 1.9E-07 60.6 8.5 82 335-450 16-101 (249)
15 2wvl_A Mannosyl-3-phosphoglyce 96.4 0.012 4E-07 62.7 10.3 89 335-428 53-172 (391)
16 2zu9_A Mannosyl-3-phosphoglyce 94.7 0.066 2.3E-06 57.5 8.2 88 336-428 52-173 (394)
17 2fy7_A Beta-1,4-galactosyltran 93.8 0.28 9.6E-06 50.0 10.5 76 334-432 64-145 (287)
18 1fo8_A Alpha-1,3-mannosyl-glyc 83.4 2 6.7E-05 45.2 7.2 92 337-433 4-116 (343)
19 2l82_A Designed protein OR32; 80.0 4.3 0.00015 36.3 7.0 52 341-392 83-134 (162)
20 3tqd_A 3-deoxy-manno-octuloson 49.2 91 0.0031 30.7 10.3 77 359-451 46-123 (256)
21 2cxk_A Camta1, calmodulin bind 49.0 17 0.00058 31.2 4.3 44 200-258 21-64 (95)
22 3k8d_A 3-deoxy-manno-octuloson 43.3 1.1E+02 0.0038 30.3 9.9 76 359-452 55-133 (264)
23 3oam_A 3-deoxy-manno-octuloson 42.2 1.2E+02 0.0041 29.3 9.9 78 358-451 38-116 (252)
24 4fcu_A 3-deoxy-manno-octuloson 37.0 1.1E+02 0.0037 30.0 8.7 76 360-451 40-116 (253)
25 1ezi_A CMP-N-acetylneuraminic 34.9 2.7E+02 0.0093 25.8 10.9 79 359-452 41-123 (228)
26 2waw_A MOBA relate protein; un 30.7 56 0.0019 29.6 5.0 83 354-450 38-120 (199)
27 2l69_A Rossmann 2X3 fold prote 29.9 1E+02 0.0035 26.7 6.1 63 333-396 47-110 (134)
28 1h7e_A 3-deoxy-manno-octuloson 27.1 2.8E+02 0.0096 25.9 9.5 80 354-451 34-114 (245)
29 2wee_A MOBA-related protein; u 25.4 81 0.0028 28.5 5.1 79 358-450 42-120 (197)
30 3lw6_A FI08434P, beta-4-galact 23.7 1.1E+02 0.0038 31.3 6.1 75 331-428 47-126 (287)
31 1qwj_A Cytidine monophospho-N- 23.4 3E+02 0.01 25.8 8.9 77 358-451 39-120 (229)
32 4ecm_A Glucose-1-phosphate thy 22.0 2.4E+02 0.0082 27.2 8.1 69 358-428 66-135 (269)
33 2gak_A Beta-1,6-N-acetylglucos 21.2 7.2E+02 0.024 25.9 12.1 109 333-452 82-200 (391)
34 2lci_A Protein OR36; structura 20.5 2.7E+02 0.0091 24.2 6.9 52 341-392 55-106 (134)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=98.68 E-value=1.9e-07 Score=91.08 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=74.2
Q ss_pred EEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCC--------CcchHHHHH
Q 043544 336 ELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWP--------WIKTQEAGF 405 (619)
Q Consensus 336 ~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp--------~~~~Q~~A~ 405 (619)
.++|++.++|++++|.++|++-..+-. -+++|.|++|+|+|.++++.+.+ ...|.++.-+ .......+.
T Consensus 2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~ 80 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALI 80 (255)
T ss_dssp CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHH
Confidence 478888889999999999998765533 27999999999999999999965 3347666555 344556778
Q ss_pred HHHHHHccCCCcEEEEeeCCceeecCCC
Q 043544 406 SHCALTARNECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 406 n~Cl~r~~~~adWVlFlDaDEFL~~P~~ 433 (619)
|.++.. ...+||+|+|.|.++ .|..
T Consensus 81 N~gi~~--a~g~~i~~lD~Dd~~-~~~~ 105 (255)
T 1qg8_A 81 NQAIEM--AEGEYITYATDDNIY-MPDR 105 (255)
T ss_dssp HHHHHH--CCCSEEEEEETTEEE-CTTH
T ss_pred HHHHHH--cCCCEEEEeCCCCcc-ChHH
Confidence 888876 468999999999998 4543
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.56 E-value=2.9e-07 Score=88.71 Aligned_cols=95 Identities=13% Similarity=0.117 Sum_probs=72.4
Q ss_pred eEEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHc
Q 043544 335 FELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTA 412 (619)
Q Consensus 335 ~~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~ 412 (619)
..++|++.++|++++|.++|+.-..+-. -+++|.||+|+|+|.++++.+.+....|.++. ......-.+.|.++..+
T Consensus 5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a 83 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVA 83 (240)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHC
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHc
Confidence 3578888889999999999998765532 27999999999999999999865433455554 22344556777887764
Q ss_pred cCCCcEEEEeeCCceeecCCC
Q 043544 413 RNECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 413 ~~~adWVlFlDaDEFL~~P~~ 433 (619)
..+||+|+|.|.++ .|..
T Consensus 84 --~g~~i~~lD~Dd~~-~~~~ 101 (240)
T 3bcv_A 84 --TGEYVAFCDSDDYV-DSDM 101 (240)
T ss_dssp --CSSEEEECCTTCCC-CTTH
T ss_pred --CCCEEEEECCCCcC-CHHH
Confidence 57999999999988 3543
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.33 E-value=4.3e-06 Score=93.14 Aligned_cols=121 Identities=14% Similarity=0.138 Sum_probs=83.3
Q ss_pred ceEEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHH
Q 043544 334 KFELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALT 411 (619)
Q Consensus 334 k~~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r 411 (619)
...++|++.++|++++|.++|+.-..+-. -+++|.||+|+|+|.++++.+.+....|.++. +.....-.+.|.++..
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~~ 452 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRL 452 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHHh
Confidence 45688888899999999999998665422 28999999999999999999865433355544 2233455677888876
Q ss_pred ccCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHhcCCCCceeEEEEEEEEeC
Q 043544 412 ARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFG 468 (619)
Q Consensus 412 ~~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~~~~~p~vgaI~v~w~~FG 468 (619)
+ ..+||+|+|.|.++ .|. .|..+++.+...+.++.+.-....+.
T Consensus 453 a--~g~~i~~ld~D~~~-~~~----------~l~~~~~~~~~~~~~~~v~~~~~~~~ 496 (625)
T 2z86_A 453 C--RGFYIGQLDSDDFL-EPD----------AVELCLDEFRKDLSLACVYTTNRNID 496 (625)
T ss_dssp C--CSSEEEECCTTCEE-CTT----------HHHHHHHHHHHCTTCSEEEEEEEEEC
T ss_pred c--CCCEEEEECCCccc-Chh----------HHHHHHHHHHhCCCeeEEEeeeEEEC
Confidence 4 57999999999998 454 34555544322234555444333333
No 4
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.25 E-value=6.6e-06 Score=85.02 Aligned_cols=94 Identities=19% Similarity=0.143 Sum_probs=70.5
Q ss_pred CceEEEEEEeecchHHHHHHHHHHHHhc--C-ccEEEEEEcCCCccHHHHHHHHhcCCccE-EE---e-eCCCcchHHHH
Q 043544 333 GKFELCVCTMLWNQASLIREWIMYHAWL--G-VERWFIYDNNSDDGIQKVIEELNLENYNV-SR---H-NWPWIKTQEAG 404 (619)
Q Consensus 333 kk~~L~VctIvkNEA~~L~EWIeyH~al--G-VD~f~IYDNgStD~T~eIL~~y~~~G~~V-t~---~-~Wp~~~~Q~~A 404 (619)
.+..++|++.++||+++|.++|+.-..+ . ..+|+|.||+|+|+|.++++.+. ..+ .. + ..+.....-.+
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~---~~~~~~~~~~~~~~~n~G~~~a 122 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAG---ARVVSREQALPEVPIRPGKGEA 122 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTT---CEEEEHHHHCTTSCCCCSHHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhh---hhhccceeeeccCCCCCCHHHH
Confidence 3456888888999999999999987665 3 46999999999999999999984 222 11 1 02333445567
Q ss_pred HHHHHHHccCCCcEEEEeeCCce-eecCC
Q 043544 405 FSHCALTARNECKWVGFFDVDEF-FYFPR 432 (619)
Q Consensus 405 ~n~Cl~r~~~~adWVlFlDaDEF-L~~P~ 432 (619)
.|.++..+ ..+||+|+|+|.. + .|.
T Consensus 123 ~n~g~~~a--~gd~i~~lD~D~~~~-~p~ 148 (329)
T 3ckj_A 123 LWRSLAAS--RGDIVVFVDSDLINP-HPM 148 (329)
T ss_dssp HHHHHHHC--CCSEEEECCTTEESC-CTT
T ss_pred HHHHHHhC--CCCEEEEECCCCCCc-ChH
Confidence 77887664 5799999999999 6 353
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.12 E-value=2.2e-05 Score=84.52 Aligned_cols=97 Identities=12% Similarity=-0.021 Sum_probs=74.1
Q ss_pred eEEEEEEeecchH-HHHHHHHHHHHhcC-c---cEEEEEEcCCCcc-HHHHHHHHhcCCc-cEEEeeCCCcchHHHHHHH
Q 043544 335 FELCVCTMLWNQA-SLIREWIMYHAWLG-V---ERWFIYDNNSDDG-IQKVIEELNLENY-NVSRHNWPWIKTQEAGFSH 407 (619)
Q Consensus 335 ~~L~VctIvkNEA-~~L~EWIeyH~alG-V---D~f~IYDNgStD~-T~eIL~~y~~~G~-~Vt~~~Wp~~~~Q~~A~n~ 407 (619)
..++|++.++||+ ..|.++|+.-..+- - .+|+|+||+|+|+ |.++|+++.+..- .|.++.-+.......+.|.
T Consensus 29 p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~ 108 (472)
T 1xhb_A 29 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLK 108 (472)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHH
Confidence 4688888899999 99999999866542 1 3899999999995 9999999865322 4766665554455677777
Q ss_pred HHHHccCCCcEEEEeeCCceeecCCCc
Q 043544 408 CALTARNECKWVGFFDVDEFFYFPRDH 434 (619)
Q Consensus 408 Cl~r~~~~adWVlFlDaDEFL~~P~~~ 434 (619)
.+..+ ..+||+|+|.|-.+ .|..-
T Consensus 109 g~~~A--~gd~i~flD~D~~~-~p~~L 132 (472)
T 1xhb_A 109 GAAVS--RGQVITFLDAHCEC-TAGWL 132 (472)
T ss_dssp HHHHC--CSSEEEEEESSEEE-CTTCH
T ss_pred HHHhc--cCCeEEEECCCeEe-CccHH
Confidence 77764 58999999999887 45543
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.02 E-value=3.3e-05 Score=86.05 Aligned_cols=106 Identities=14% Similarity=-0.079 Sum_probs=80.4
Q ss_pred eEEEEEEeecchH-HHHHHHHHHHHhcC-cc---EEEEEEcCCCccH-HHHHHHHhcCCccEEEeeCCCcchHHHHHHHH
Q 043544 335 FELCVCTMLWNQA-SLIREWIMYHAWLG-VE---RWFIYDNNSDDGI-QKVIEELNLENYNVSRHNWPWIKTQEAGFSHC 408 (619)
Q Consensus 335 ~~L~VctIvkNEA-~~L~EWIeyH~alG-VD---~f~IYDNgStD~T-~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~C 408 (619)
..++|++.++||+ .+|.++|+.-...- -+ +|||+||+|+|++ .++|+.|.+....|.++.-+....-..+.|.+
T Consensus 112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~G 191 (570)
T 2d7i_A 112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLG 191 (570)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHHH
Confidence 4688999999998 99999999865542 22 8999999999999 99999986543347766655544555677777
Q ss_pred HHHccCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHh
Q 043544 409 ALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVAN 450 (619)
Q Consensus 409 l~r~~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~ 450 (619)
+..+ ..+||+|+|.|-.+ .|..- ..+.+.+++
T Consensus 192 ~~~A--~gd~i~fLD~D~~~-~p~~L-------~~ll~~l~~ 223 (570)
T 2d7i_A 192 ASVA--TGDVITFLDSHCEA-NVNWL-------PPLLDRIAR 223 (570)
T ss_dssp HHHC--CSSEEEECCSSEEE-CTTCS-------HHHHHHHHH
T ss_pred HHhc--CCCEEEEEcCCccc-cccHH-------HHHHHHHHh
Confidence 7764 57999999999999 56654 355555554
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.94 E-value=1.7e-05 Score=84.77 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=69.1
Q ss_pred ceEEEEEEeecchHHHHHHHHHHHHhc-----CccEEEEEEcCCCccHHHHHHHHhcCCccEEEe-----eCCCcchHHH
Q 043544 334 KFELCVCTMLWNQASLIREWIMYHAWL-----GVERWFIYDNNSDDGIQKVIEELNLENYNVSRH-----NWPWIKTQEA 403 (619)
Q Consensus 334 k~~L~VctIvkNEA~~L~EWIeyH~al-----GVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~-----~Wp~~~~Q~~ 403 (619)
...++|++.++||+++|.++|+.-..+ ...+|+|+||+|+|+|.++++.+. ..+... ..+.....-.
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~---~~v~~~~~~~i~~~~n~G~g~ 169 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHG---AEVYSENELMSGYGDAHGKGD 169 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTT---CEEEEGGGTTGGGCSCCSHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhC---chhcccceeEecCCccCCHHH
Confidence 456888888999999999999976542 467999999999999999999984 222211 1122334446
Q ss_pred HHHHHHHHccCCCcEEEEeeCCce-eecCCC
Q 043544 404 GFSHCALTARNECKWVGFFDVDEF-FYFPRD 433 (619)
Q Consensus 404 A~n~Cl~r~~~~adWVlFlDaDEF-L~~P~~ 433 (619)
+++.++.. ...+||+|+|+|.. + .|..
T Consensus 170 A~n~G~~~--A~gd~i~~lDaD~~~~-~p~~ 197 (387)
T 3f1y_A 170 AMWRALSV--TRGDLVLYIDADTRDF-RPQL 197 (387)
T ss_dssp HHHHHTTT--CCSSEEEECCTTCSSC-CTHH
T ss_pred HHHHHHHh--cCCCEEEEEcCCCCcC-CHHH
Confidence 67777655 36899999999999 6 3543
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=97.91 E-value=3.3e-05 Score=87.91 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=68.3
Q ss_pred ceEEEEEEeecchHHHHHHHHHHHHhc-----CccEEEEEEcCCCcc-----HHHHHHHHhcCCccEEEeeCCCcchHHH
Q 043544 334 KFELCVCTMLWNQASLIREWIMYHAWL-----GVERWFIYDNNSDDG-----IQKVIEELNLENYNVSRHNWPWIKTQEA 403 (619)
Q Consensus 334 k~~L~VctIvkNEA~~L~EWIeyH~al-----GVD~f~IYDNgStD~-----T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~ 403 (619)
+..|+|++.++|++++|.++|+.-..+ ..++|||+||+|+|+ +.++++.+ +..|+++.-+ ...-..
T Consensus 179 ~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~---~~~I~vI~~~-N~G~a~ 254 (657)
T 4fix_A 179 TANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL---GSRLSIHDQP-NLGGSG 254 (657)
T ss_dssp CCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH---GGGEEEEECC-CCHHHH
T ss_pred CCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc---CCCEEEEECC-CCCHHH
Confidence 356888888999999999999985442 355899999999873 44555544 2346666555 444456
Q ss_pred HHHHHHHHccC--CCcEEEEeeCCceeecCCC
Q 043544 404 GFSHCALTARN--ECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 404 A~n~Cl~r~~~--~adWVlFlDaDEFL~~P~~ 433 (619)
++|.++..+.. .+|||+|+|.|-.+ .|..
T Consensus 255 a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~ 285 (657)
T 4fix_A 255 GYSRVMYEALKNTDCQQILFMDDDIRL-EPDS 285 (657)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSSEEE-CTHH
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCcc-ChhH
Confidence 67777665433 68999999999998 3543
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.84 E-value=0.00011 Score=81.82 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=72.1
Q ss_pred eEEEEEEeecchHHHHHHHHHHHHhcC---ccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcc-hHHHHHHHHHH
Q 043544 335 FELCVCTMLWNQASLIREWIMYHAWLG---VERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIK-TQEAGFSHCAL 410 (619)
Q Consensus 335 ~~L~VctIvkNEA~~L~EWIeyH~alG---VD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~-~Q~~A~n~Cl~ 410 (619)
..++|++.++||+..|.++|+.-..+- --+++|+||+|+|++.++++.+.+.. .+.++.-+..+ ....+.|.++.
T Consensus 93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~-~i~~i~~~~~~~g~~~a~N~g~~ 171 (625)
T 2z86_A 93 DGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLL-NIKYVRQKDYGYQLCAVRNLGLR 171 (625)
T ss_dssp CCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTS-CEEEEEECCCSCCHHHHHHHHHH
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcC-CeEEEEeCCCCcchhHHHHHHHH
Confidence 468888889999999999999876552 45899999999999999999985432 35554444333 24466777777
Q ss_pred HccCCCcEEEEeeCCceeecCC
Q 043544 411 TARNECKWVGFFDVDEFFYFPR 432 (619)
Q Consensus 411 r~~~~adWVlFlDaDEFL~~P~ 432 (619)
.+ .++||+|+|.|..+ .|.
T Consensus 172 ~a--~g~~v~~lD~D~~~-~~~ 190 (625)
T 2z86_A 172 AA--KYNYVAILDCDMAP-NPL 190 (625)
T ss_dssp HC--CSSEEEEECTTEEE-CTT
T ss_pred hC--CcCEEEEECCCCCC-CHH
Confidence 64 68999999999998 454
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=97.70 E-value=0.00022 Score=77.59 Aligned_cols=95 Identities=14% Similarity=-0.037 Sum_probs=69.3
Q ss_pred ceEEEEEEeecchHH-HHHHHHHHHHhc-Ccc---EEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHH
Q 043544 334 KFELCVCTMLWNQAS-LIREWIMYHAWL-GVE---RWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHC 408 (619)
Q Consensus 334 k~~L~VctIvkNEA~-~L~EWIeyH~al-GVD---~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~C 408 (619)
...++|++.++||+. +|.++|+.-... .-+ +|+|+||+|+|++.+.+ +. ....|.++.-+.......|.|.+
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~--~~-~~~~v~vi~~~~n~G~~~A~N~G 141 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL--LG-KIEKVRVLRNDRREGLMRSRVRG 141 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG--GG-GBTTEEEEECSSCCHHHHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH--Hh-cCCCEEEEECCCCcCHHHHHHHH
Confidence 346899999999987 999999986554 222 89999999999985332 11 12236666655555667788888
Q ss_pred HHHccCCCcEEEEeeCCceeecCCCc
Q 043544 409 ALTARNECKWVGFFDVDEFFYFPRDH 434 (619)
Q Consensus 409 l~r~~~~adWVlFlDaDEFL~~P~~~ 434 (619)
+..+ ..+||+|+|.|-.+ .|..-
T Consensus 142 ~~~A--~gd~i~flD~D~~~-~p~~L 164 (501)
T 2ffu_A 142 ADAA--QAKVLTFLDSHCEC-NEHWL 164 (501)
T ss_dssp HHHC--CSSEEEECCSSEEE-CTTCH
T ss_pred HHhc--CCCEEEEECCCccc-CccHH
Confidence 8764 58999999999988 46543
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.58 E-value=9.7e-06 Score=92.62 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=0.0
Q ss_pred EEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcC-CccEEEeeCCCcchHHHHHHHHHHHc
Q 043544 336 ELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLE-NYNVSRHNWPWIKTQEAGFSHCALTA 412 (619)
Q Consensus 336 ~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~-G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~ 412 (619)
.++|++.++|++++|.++|++-..+-. -+++|.|++|+|+|.++++.+.+. +..|..+.-+.....-.+.|.++..+
T Consensus 3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A 82 (729)
T 3l7i_A 3 KLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEV 82 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence 478888899999999999998655422 369999999999999999998654 22344443332233345666777653
Q ss_pred cCCCcEEEEeeCCceeecCCC
Q 043544 413 RNECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 413 ~~~adWVlFlDaDEFL~~P~~ 433 (619)
..+||+|+|.|..+ .|..
T Consensus 83 --~gdyI~flD~Dd~~-~p~~ 100 (729)
T 3l7i_A 83 --ETPYFMFLDADDEL-ASYA 100 (729)
T ss_dssp ---------------------
T ss_pred --cCCEEEEECCCCCC-ChhH
Confidence 57999999999999 4644
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=97.09 E-value=0.0015 Score=75.90 Aligned_cols=113 Identities=12% Similarity=0.026 Sum_probs=73.0
Q ss_pred eEEEEEEeecchHHHH-HHHHHHHHhcCcc----EEEEEEcCCCccHH---------------HHHHHHh-cCCccEEEe
Q 043544 335 FELCVCTMLWNQASLI-REWIMYHAWLGVE----RWFIYDNNSDDGIQ---------------KVIEELN-LENYNVSRH 393 (619)
Q Consensus 335 ~~L~VctIvkNEA~~L-~EWIeyH~alGVD----~f~IYDNgStD~T~---------------eIL~~y~-~~G~~Vt~~ 393 (619)
..++|++.++||++.+ .++|+.-..+-.. +|+|.|++|+|+|. +.++.+. +.++ .++
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v--~~i 217 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGV--VYS 217 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTC--EEE
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCc--EEE
Confidence 3678888889998766 8899987655322 79999999999982 3344442 2243 333
Q ss_pred eCCCc-chHHHHHHHHHHHccCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHhcCCCCceeEEEE
Q 043544 394 NWPWI-KTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRT 462 (619)
Q Consensus 394 ~Wp~~-~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~~~~~p~vgaI~v 462 (619)
.-+.. +....+.|.++.. .+.|||+++|+|-.+ .|+ .|..+++.+.+.+.++.+.-
T Consensus 218 ~~~~~~~GKa~alN~gl~~--a~gd~Il~lDaD~~~-~pd----------~L~~lv~~~~~dp~v~~V~~ 274 (802)
T 4hg6_A 218 TRERNEHAKAGNMSAALER--LKGELVVVFDADHVP-SRD----------FLARTVGYFVEDPDLFLVQT 274 (802)
T ss_dssp ECSSCCSHHHHHHHHHHHH--CCCSEEEECCTTEEE-CTT----------HHHHHHHHHHHSSSCCEEEC
T ss_pred EecCCCCcchHHHHHHHHh--cCCCEEEEECCCCCc-ChH----------HHHHHHHHHhcCCCeEEEec
Confidence 22222 3344567788776 468999999999988 343 45555555422245665543
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=96.73 E-value=0.0058 Score=65.62 Aligned_cols=63 Identities=13% Similarity=0.068 Sum_probs=40.7
Q ss_pred cEEEEEEcCCCccHHHHHHHH----h-cCCccEEEeeCC--C--cchHHHHHHHHH----HHccCCCcEEEEeeCCce
Q 043544 363 ERWFIYDNNSDDGIQKVIEEL----N-LENYNVSRHNWP--W--IKTQEAGFSHCA----LTARNECKWVGFFDVDEF 427 (619)
Q Consensus 363 D~f~IYDNgStD~T~eIL~~y----~-~~G~~Vt~~~Wp--~--~~~Q~~A~n~Cl----~r~~~~adWVlFlDaDEF 427 (619)
-+|+|+|+||+|+|.++++++ . +.|..+....-. + ...+-.|++..+ .. ..+|||+++|+|=-
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~--a~gd~vv~mDADlq 104 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEE--TQWERIHFYDADIT 104 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHH--CCCSEEEECCTTCS
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHh--CCCCEEEEEcCCCC
Confidence 479999999999999999943 2 335544322211 2 223334444444 33 46899999999953
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=96.56 E-value=0.0055 Score=60.56 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=54.7
Q ss_pred eEEEEEEeecchHHHHHHHHHHHHh----cCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHH
Q 043544 335 FELCVCTMLWNQASLIREWIMYHAW----LGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCAL 410 (619)
Q Consensus 335 ~~L~VctIvkNEA~~L~EWIeyH~a----lGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~ 410 (619)
..++|+ +++|+++.|.++|++... ...-+++|.||+|+|. .|+ . .|.|..+.
T Consensus 16 ~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~----------~g~----------a---~a~N~Gi~ 71 (249)
T 2nxv_A 16 LMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ----------FHG----------F---SWHKQMLP 71 (249)
T ss_dssp CSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS----------CCT----------T---THHHHHGG
T ss_pred ceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc----------ccH----------H---HHHHHHHH
Confidence 456765 459999999999995432 1225899999999872 122 1 34455554
Q ss_pred HccCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHh
Q 043544 411 TARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVAN 450 (619)
Q Consensus 411 r~~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~ 450 (619)
. ...+|++|+|.|-++ .|..- ..|.+.+++
T Consensus 72 ~--A~g~yl~fln~D~~~-~~~~l-------~~l~~~~~~ 101 (249)
T 2nxv_A 72 R--CKGRYVIFCHEDVEL-VDRGY-------DDLVAAIEA 101 (249)
T ss_dssp G--CCSSEEEEEETTEEC-SSCCH-------HHHHHHHHH
T ss_pred h--cCCCEEEEECCCccc-CccHH-------HHHHHHHHh
Confidence 4 458999999999998 45443 345555554
No 15
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=96.41 E-value=0.012 Score=62.69 Aligned_cols=89 Identities=17% Similarity=0.233 Sum_probs=54.9
Q ss_pred eEEEEEEeecchHHHHHHHHHHHHhcCcc---EEEEEEcCCCccH---HHHHHHHhc-CCccEEEeeCCCcchHHHHHHH
Q 043544 335 FELCVCTMLWNQASLIREWIMYHAWLGVE---RWFIYDNNSDDGI---QKVIEELNL-ENYNVSRHNWPWIKTQEAGFSH 407 (619)
Q Consensus 335 ~~L~VctIvkNEA~~L~EWIeyH~alGVD---~f~IYDNgStD~T---~eIL~~y~~-~G~~Vt~~~Wp~~~~Q~~A~n~ 407 (619)
..++++.-+|||...+.|=|.- +.. +|+|+||+|+|++ .++++.|.+ ..-.+..++- ....-..|++.
T Consensus 53 ~klSIVVPvYNEe~~lLesVl~----qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQ-kn~gls~Ar~~ 127 (391)
T 2wvl_A 53 EQTAIVVPTRNERLKLLEGVLS----GIPHEALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQ-KDPALAEALRA 127 (391)
T ss_dssp TTEEEEEEESSCCHHHHHHHHH----TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEET-TCHHHHHHHHH
T ss_pred hceEEEEeccCcHHHHHHHHHh----cCCCCceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEec-cChHHHHHHHh
Confidence 4577777789998877554432 322 7999999999999 678989964 2222443321 11111122211
Q ss_pred -----------------------HHHHc-cCCCcEEEEeeCCcee
Q 043544 408 -----------------------CALTA-RNECKWVGFFDVDEFF 428 (619)
Q Consensus 408 -----------------------Cl~r~-~~~adWVlFlDaDEFL 428 (619)
-+..+ ....+||.|+|+|-++
T Consensus 128 ~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi 172 (391)
T 2wvl_A 128 GGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYF 172 (391)
T ss_dssp TTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSC
T ss_pred cCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 11111 1368999999999999
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.66 E-value=0.066 Score=57.54 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=54.5
Q ss_pred EEEEEEeecchHHHHHHHHHHHHhc-CccEEEEEEcCCCccH------HHHHHHHhc---CCccEEEeeCCCc-------
Q 043544 336 ELCVCTMLWNQASLIREWIMYHAWL-GVERWFIYDNNSDDGI------QKVIEELNL---ENYNVSRHNWPWI------- 398 (619)
Q Consensus 336 ~L~VctIvkNEA~~L~EWIeyH~al-GVD~f~IYDNgStD~T------~eIL~~y~~---~G~~Vt~~~Wp~~------- 398 (619)
.+++++=++||+..+.+-+. ..+ ...+++|.|++|+|++ .++++.+.+ .+..| .|...
T Consensus 52 ~iSVVIP~yNEE~~lI~~vL--~~i~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~V---l~~~~p~v~~~~ 126 (394)
T 2zu9_A 52 KMAVIVPMKNEKLHLVDGVL--KAIPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIM---IHQKDPGLAKAF 126 (394)
T ss_dssp TEEEEEEESSCCHHHHHHHH--HHSCTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEE---EETTCHHHHHHH
T ss_pred CEEEEEecCcccHHHHHHHH--HcCCCCcEEEEEECcCcccccchhhHHHHHHHHhhccccceEE---EecCCcchhHHh
Confidence 57888888999866533221 122 2457999999997766 677777532 34312 23221
Q ss_pred ----------------chHHHHHHHHHHHc-cCCCcEEEEeeCCcee
Q 043544 399 ----------------KTQEAGFSHCALTA-RNECKWVGFFDVDEFF 428 (619)
Q Consensus 399 ----------------~~Q~~A~n~Cl~r~-~~~adWVlFlDaDEFL 428 (619)
..+-.|...++..+ ....+||+|+|+|=++
T Consensus 127 ~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl~i 173 (394)
T 2zu9_A 127 KEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADNYI 173 (394)
T ss_dssp HHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSC
T ss_pred hhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCCCC
Confidence 24444455566544 2368999999999943
No 17
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=93.80 E-value=0.28 Score=50.05 Aligned_cols=76 Identities=14% Similarity=0.266 Sum_probs=48.6
Q ss_pred ceEEEEEEeecchHHHHHHHHHHHH----hcCcc-EEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHH-HHHHH
Q 043544 334 KFELCVCTMLWNQASLIREWIMYHA----WLGVE-RWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQE-AGFSH 407 (619)
Q Consensus 334 k~~L~VctIvkNEA~~L~EWIeyH~----alGVD-~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~-~A~n~ 407 (619)
...++|++.++|+++.|.++|++-. ....+ +|+|.|+.+++. ++ ..... .++..
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~------------f~--------~a~a~N~G~~~ 123 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTI------------FN--------RAKLLNVGFQE 123 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSC------------CC--------HHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCCc------------cc--------hhhhhhhHHHH
Confidence 4678999999999999999999865 22333 688888843321 10 00001 12222
Q ss_pred HHHHccCCCcEEEEeeCCceeecCC
Q 043544 408 CALTARNECKWVGFFDVDEFFYFPR 432 (619)
Q Consensus 408 Cl~r~~~~adWVlFlDaDEFL~~P~ 432 (619)
++.. ...+|++|+|+|-.+ .|.
T Consensus 124 al~~--A~gd~i~flD~D~i~-~~d 145 (287)
T 2fy7_A 124 ALKD--YDYTCFVFSDVDLIP-MND 145 (287)
T ss_dssp HHHH--SCCCEEEEECTTEEE-SBT
T ss_pred HHHh--CCCCEEEEECCCccc-CCC
Confidence 2233 568999999999988 354
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=83.37 E-value=2 Score=45.20 Aligned_cols=92 Identities=10% Similarity=0.043 Sum_probs=60.0
Q ss_pred EEEEEeecchHHHHHHHHHHHHhc--Cc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCc----------chH-
Q 043544 337 LCVCTMLWNQASLIREWIMYHAWL--GV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWI----------KTQ- 401 (619)
Q Consensus 337 L~VctIvkNEA~~L~EWIeyH~al--GV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~----------~~Q- 401 (619)
+.|+.+++|-.+ |..+|+.-..+ +. ..++|.|+++.+++.++++.|.. .|+....+.. +.+
T Consensus 4 ~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~---~I~~~~~~d~~~~~~~~~N~g~~~ 79 (343)
T 1fo8_A 4 IPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS---AVTHIRQPDLSNIAVQPDHRKFQG 79 (343)
T ss_dssp CCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG---GSEEEECSCCCCCCCCTTCGGGHH
T ss_pred ccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC---ceEEEEcCCccccccchhhcCccc
Confidence 467788899987 99999876554 23 37999999999999999999842 2333211211 110
Q ss_pred --H--HHHHHHHHHc--cCCCcEEEEeeCCceeecCCC
Q 043544 402 --E--AGFSHCALTA--RNECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 402 --~--~A~n~Cl~r~--~~~adWVlFlDaDEFL~~P~~ 433 (619)
. ..+..++... ...++.++++|-|=.+ .|.-
T Consensus 80 y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~-spdF 116 (343)
T 1fo8_A 80 YYKIARHYRWALGQIFHNFNYPAAVVVEDDLEV-APDF 116 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEE-CTTH
T ss_pred chhHhHHHHHHHHHHHHhccCCEEEEEcCCCeE-CHHH
Confidence 0 1222333332 2368999999999888 4643
No 19
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=79.95 E-value=4.3 Score=36.27 Aligned_cols=52 Identities=21% Similarity=0.361 Sum_probs=43.0
Q ss_pred EeecchHHHHHHHHHHHHhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEE
Q 043544 341 TMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSR 392 (619)
Q Consensus 341 tIvkNEA~~L~EWIeyH~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~ 392 (619)
+.+-+.-.+|.+||+--+.-|++-|++|+|..+|.-.+.-+++...|..|..
T Consensus 83 ivttddkewikdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdvrt 134 (162)
T 2l82_A 83 IVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRT 134 (162)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEE
T ss_pred EEecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeee
Confidence 4445667899999998888899999999999888888888888888876644
No 20
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=49.17 E-value=91 Score=30.72 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=43.0
Q ss_pred hcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHcc-CCCcEEEEeeCCceeecCCCcccC
Q 043544 359 WLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTAR-NECKWVGFFDVDEFFYFPRDHRLG 437 (619)
Q Consensus 359 alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~-~~adWVlFlDaDEFL~~P~~~g~~ 437 (619)
..|+++++|..+ ++...++++.+ |.++....-........ ...++.... ...+++++++.|+-+..+.
T Consensus 46 ~~~i~~VvVvt~--~~~i~~~~~~~---g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~----- 114 (256)
T 3tqd_A 46 KSGAEEVVIATD--DKRIRQVAEDF---GAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPD----- 114 (256)
T ss_dssp HTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHH-----
T ss_pred hCCCCEEEEECC--HHHHHHHHHHc---CCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHH-----
Confidence 348999998864 35555555544 76554322112222222 333443321 2579999999999653232
Q ss_pred CcccchHHHHHHhc
Q 043544 438 LLGENSLRSLVANF 451 (619)
Q Consensus 438 ~p~~~sL~dlL~~~ 451 (619)
.|..+++.+
T Consensus 115 -----~i~~li~~~ 123 (256)
T 3tqd_A 115 -----AIRKLAEDL 123 (256)
T ss_dssp -----HHHHHHHHH
T ss_pred -----HHHHHHHHH
Confidence 566666654
No 21
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=49.04 E-value=17 Score=31.18 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=30.4
Q ss_pred CcEEEEEeeccCCCCCCCCCceeEEEeecCcCCCCCceeEEehhhhcccceeecCCCcc
Q 043544 200 KTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRS 258 (619)
Q Consensus 200 ~~~vvf~kg~n~r~~~~~~~~~~~c~~~~~~~~~~~~~~~~t~~~~~~qev~rC~~p~~ 258 (619)
+-+-|.+.|-++..+ +.+.|.||.. . .+|.-....++||..|+.
T Consensus 21 GGTkv~I~G~~L~~g-----s~~~~~fG~~-------~---vpa~~~s~~vl~C~tPp~ 64 (95)
T 2cxk_A 21 GGVKVLITGPWQEAS-----NNYSCLFDQI-------S---VPASLIQPGVLRCYCPAH 64 (95)
T ss_dssp CCCEEEEESSCCCCS-----SCEEEEETTE-------E---EECEEEETTEEEEECCCC
T ss_pred CCEEEEEEeECCCCC-----ccEEEEECCE-------E---EeEEEeECCEEEEEecCC
Confidence 466778899888543 5799999742 1 122225667999999994
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=43.29 E-value=1.1e+02 Score=30.26 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=42.7
Q ss_pred hcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEe--eCCCcchHHHHHHHHHHHcc-CCCcEEEEeeCCceeecCCCcc
Q 043544 359 WLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRH--NWPWIKTQEAGFSHCALTAR-NECKWVGFFDVDEFFYFPRDHR 435 (619)
Q Consensus 359 alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~--~Wp~~~~Q~~A~n~Cl~r~~-~~adWVlFlDaDEFL~~P~~~g 435 (619)
..|+++++|..+ ++...++++.+ |..+... +++. .... ...++.... ...+++++++.|+-+..+
T Consensus 55 ~~~i~~IvV~t~--~~~i~~~~~~~---g~~v~~~~~~~~~--Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~---- 122 (264)
T 3k8d_A 55 ESGAERIIVATD--HEDVARAVEAA---GGEVCMTRADHQS--GTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPA---- 122 (264)
T ss_dssp HTTCSEEEEEES--CHHHHHHHHHT---TCEEEECCTTCCS--HHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCH----
T ss_pred hCCCCEEEEECC--HHHHHHHHHHc---CCEEEEecCCCCC--CHHH-HHHHHHHhccCCCCEEEEEcCCcccCCH----
Confidence 458999998763 45566666554 6545432 2332 1111 222222211 357999999999965323
Q ss_pred cCCcccchHHHHHHhcC
Q 043544 436 LGLLGENSLRSLVANFS 452 (619)
Q Consensus 436 ~~~p~~~sL~dlL~~~~ 452 (619)
..|..+++.+.
T Consensus 123 ------~~i~~li~~~~ 133 (264)
T 3k8d_A 123 ------TIIRQVADNLA 133 (264)
T ss_dssp ------HHHHHHHHHHH
T ss_pred ------HHHHHHHHHHh
Confidence 25666666553
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=42.16 E-value=1.2e+02 Score=29.30 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=42.6
Q ss_pred HhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHcc-CCCcEEEEeeCCceeecCCCccc
Q 043544 358 AWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTAR-NECKWVGFFDVDEFFYFPRDHRL 436 (619)
Q Consensus 358 ~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~-~~adWVlFlDaDEFL~~P~~~g~ 436 (619)
...|+++|+|..+ ++.+.+.+.. .|.++....-........ ...++.... ...+++++++.|+-+..+
T Consensus 38 ~~~~~~~ivVv~~--~~~i~~~~~~---~g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~----- 106 (252)
T 3oam_A 38 MQAGADRVIIATD--DERVEQAVQA---FGGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPP----- 106 (252)
T ss_dssp HHTTCSEEEEEES--CHHHHHHHHH---TTCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCH-----
T ss_pred HhCCCCeEEEECC--HHHHHHHHHH---cCCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCH-----
Confidence 3458999998773 3555555554 476554422111111111 223333321 257999999999955223
Q ss_pred CCcccchHHHHHHhc
Q 043544 437 GLLGENSLRSLVANF 451 (619)
Q Consensus 437 ~~p~~~sL~dlL~~~ 451 (619)
..|.++++.+
T Consensus 107 -----~~i~~l~~~~ 116 (252)
T 3oam_A 107 -----AIIRQVADNL 116 (252)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHH
Confidence 2566666654
No 24
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=37.02 E-value=1.1e+02 Score=30.04 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=42.6
Q ss_pred cCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHcc-CCCcEEEEeeCCceeecCCCcccCC
Q 043544 360 LGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTAR-NECKWVGFFDVDEFFYFPRDHRLGL 438 (619)
Q Consensus 360 lGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~-~~adWVlFlDaDEFL~~P~~~g~~~ 438 (619)
.|+++++|..+ ++.+.++++. .|..+....-...... ..+.+++.... ...+|+++++.|+=+..|.
T Consensus 40 ~~~~~vvVvt~--~~~i~~~~~~---~g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~------ 107 (253)
T 4fcu_A 40 EGFDDLCVATD--DERIAEICRA---EGVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQ------ 107 (253)
T ss_dssp TTCCEEEEEES--CHHHHHHHHT---TTCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHH------
T ss_pred cCCCEEEEECC--HHHHHHHHHH---cCCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHH------
Confidence 48999998875 3445555443 3665543211112222 23445554433 2579999999999552232
Q ss_pred cccchHHHHHHhc
Q 043544 439 LGENSLRSLVANF 451 (619)
Q Consensus 439 p~~~sL~dlL~~~ 451 (619)
.|..+++.+
T Consensus 108 ----~i~~li~~~ 116 (253)
T 4fcu_A 108 ----LVQQVAKLL 116 (253)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHHH
Confidence 566666554
No 25
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=34.85 E-value=2.7e+02 Score=25.81 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=43.6
Q ss_pred hcC-ccEEEEEEcCCCccHHHHHHHHhcCCccEEEee--CC-CcchHHHHHHHHHHHccCCCcEEEEeeCCceeecCCCc
Q 043544 359 WLG-VERWFIYDNNSDDGIQKVIEELNLENYNVSRHN--WP-WIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDH 434 (619)
Q Consensus 359 alG-VD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~--Wp-~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~~~ 434 (619)
..| +++++|..+ .+...++++.+ |..+...+ +. +......+...++.......++++++++|--+..+
T Consensus 41 ~~~~~~~ivvv~~--~~~i~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~--- 112 (228)
T 1ezi_A 41 SSKCFDRIIVSTD--GGLIAEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTG--- 112 (228)
T ss_dssp HHCCCSEEEEEES--CHHHHHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCH---
T ss_pred hCCCCCEEEEECC--CHHHHHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCH---
Confidence 346 799998885 34455555544 65441111 11 11222334444544433357999999999865322
Q ss_pred ccCCcccchHHHHHHhcC
Q 043544 435 RLGLLGENSLRSLVANFS 452 (619)
Q Consensus 435 g~~~p~~~sL~dlL~~~~ 452 (619)
..|..+++...
T Consensus 113 -------~~i~~l~~~~~ 123 (228)
T 1ezi_A 113 -------AHIREAFSLFD 123 (228)
T ss_dssp -------HHHHHHHTTCC
T ss_pred -------HHHHHHHHHHH
Confidence 26778887654
No 26
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=30.69 E-value=56 Score=29.59 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=44.7
Q ss_pred HHHHHhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHccCCCcEEEEeeCCceeecCCC
Q 043544 354 IMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRD 433 (619)
Q Consensus 354 IeyH~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~~ 433 (619)
|+--...|+++++|..+...+ ++.+.+.+.|+.+.... .+......++..++.......+|++++++|--+. +.
T Consensus 38 l~~l~~~~~~~i~vv~~~~~~---~~~~~~~~~~~~~~~~~-~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~-~~- 111 (199)
T 2waw_A 38 LAMARRCPFDQLIVTLGGAAD---EVLEKVELDGLDIVLVD-DAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGI-TA- 111 (199)
T ss_dssp HHHHHTSSCSEEEEEECTTHH---HHHHHSCCTTSEEEECC-CCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTC-CH-
T ss_pred HHHHHhCCCCcEEEEeCCCHH---HHHHHhccCCCEEEECC-CcccCHHHHHHHHHHhhhccCCeEEEEeCCcccC-CH-
Confidence 333344578999998865433 33333333365443321 1112222344455543323579999999998652 22
Q ss_pred cccCCcccchHHHHHHh
Q 043544 434 HRLGLLGENSLRSLVAN 450 (619)
Q Consensus 434 ~g~~~p~~~sL~dlL~~ 450 (619)
..|..+++.
T Consensus 112 --------~~i~~l~~~ 120 (199)
T 2waw_A 112 --------SAVASLIAG 120 (199)
T ss_dssp --------HHHHHHHHH
T ss_pred --------HHHHHHHhh
Confidence 267777765
No 27
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.93 E-value=1e+02 Score=26.73 Aligned_cols=63 Identities=16% Similarity=0.335 Sum_probs=41.6
Q ss_pred CceEEEEEEeecchHHHHHHHHHHHHhcCccE-EEEEEcCCCccHHHHHHHHhcCCccEEEeeCC
Q 043544 333 GKFELCVCTMLWNQASLIREWIMYHAWLGVER-WFIYDNNSDDGIQKVIEELNLENYNVSRHNWP 396 (619)
Q Consensus 333 kk~~L~VctIvkNEA~~L~EWIeyH~alGVD~-f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp 396 (619)
+||.-.++..+-+.-.+-..-|.+.+.+|++- |+|||.+ .....+.-++..+.|++|..+.-|
T Consensus 47 kkynativvvvvddkewaekairfvkslgaqvliiiydqd-qnrleefsrevrrrgfevrtvtsp 110 (134)
T 2l69_A 47 KKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQD-QNRLEEFSREVRRRGFEVRTVTSP 110 (134)
T ss_dssp TCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSC-HHHHHHHHHHHHHTTCCEEEESSH
T ss_pred HHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCc-hhHHHHHHHHHHhcCceEEEecCh
Confidence 34544555555666667777888888999996 5567653 334566666666789887655444
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=27.09 E-value=2.8e+02 Score=25.91 Aligned_cols=80 Identities=6% Similarity=0.021 Sum_probs=43.7
Q ss_pred HHHHHhcCc-cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHccCCCcEEEEeeCCceeecCC
Q 043544 354 IMYHAWLGV-ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPR 432 (619)
Q Consensus 354 IeyH~alGV-D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~ 432 (619)
|+--...|+ ++++|..+. +...+.++.+ |+.+....-++...+..+. .++... ..++++++++|--+..+
T Consensus 34 i~~~~~~~~~~~ivvv~~~--~~i~~~~~~~---~~~~~~~~~~~~~g~~~~~-~~~~~~--~~~~~lv~~~D~P~~~~- 104 (245)
T 1h7e_A 34 YERALQVAGVAEVWVATDD--PRVEQAVQAF---GGKAIMTRNDHESGTDRLV-EVMHKV--EADIYINLQGDEPMIRP- 104 (245)
T ss_dssp HHHHHTCTTCCEEEEEESC--HHHHHHHHHT---TCEEEECCSCCSSHHHHHH-HHHHHS--CCSEEEECCTTCTTCCH-
T ss_pred HHHHHhCCCCCeEEEECCc--HHHHHHHHHc---CCeEEeCCCccCCcHHHHH-HHHHhC--CCCEEEEEcCCcCcCCH-
Confidence 333344575 999988853 4455555443 6544322112223343222 344432 47899999999865322
Q ss_pred CcccCCcccchHHHHHHhc
Q 043544 433 DHRLGLLGENSLRSLVANF 451 (619)
Q Consensus 433 ~~g~~~p~~~sL~dlL~~~ 451 (619)
..|..+++..
T Consensus 105 ---------~~i~~l~~~~ 114 (245)
T 1h7e_A 105 ---------RDVETLLQGM 114 (245)
T ss_dssp ---------HHHHHHHHHH
T ss_pred ---------HHHHHHHHHH
Confidence 2566666654
No 29
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=25.40 E-value=81 Score=28.51 Aligned_cols=79 Identities=11% Similarity=0.084 Sum_probs=41.2
Q ss_pred HhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHccCCCcEEEEeeCCceeecCCCcccC
Q 043544 358 AWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLG 437 (619)
Q Consensus 358 ~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~~~g~~ 437 (619)
...|+++++|..+...+ ++.+.+.+.|+.+.... .+......++..++.......++++++++|--+..+
T Consensus 42 ~~~~~~~i~vv~~~~~~---~~~~~~~~~~~~~~~~~-~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~------ 111 (197)
T 2wee_A 42 RQAGFDQLILTLGGAAS---AVRAAMALDGTDVVVVE-DVERGCAASLRVALARVHPRATGIVLMLGDQPQVAP------ 111 (197)
T ss_dssp HHTTCSEEEEEECTTHH---HHHHHSCCTTSEEEECC-----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCH------
T ss_pred HhcCCCcEEEEeCCCHH---HHHHHhccCCCEEEECC-CcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCH------
Confidence 34589999988765433 33333333355332211 111122344444543322246999999999844222
Q ss_pred CcccchHHHHHHh
Q 043544 438 LLGENSLRSLVAN 450 (619)
Q Consensus 438 ~p~~~sL~dlL~~ 450 (619)
..|..+++.
T Consensus 112 ----~~i~~l~~~ 120 (197)
T 2wee_A 112 ----ATLRRIIDV 120 (197)
T ss_dssp ----HHHHHHHHH
T ss_pred ----HHHHHHHhh
Confidence 257777775
No 30
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=23.67 E-value=1.1e+02 Score=31.35 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=46.3
Q ss_pred CCCceEEEEEEeecchHHHHHHHHHHHH----hcCccE-EEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCcchHHHHH
Q 043544 331 GGGKFELCVCTMLWNQASLIREWIMYHA----WLGVER-WFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGF 405 (619)
Q Consensus 331 ~~kk~~L~VctIvkNEA~~L~EWIeyH~----alGVD~-f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~ 405 (619)
-..++.+||++-++|-.+.|..||.|-. .+.++. |||... .++.. ..++. .+
T Consensus 47 c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ-~~~~~--------------------FNRa~--Ll 103 (287)
T 3lw6_A 47 GASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQ-VDRFR--------------------FNRAS--LI 103 (287)
T ss_dssp CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-CSSSC--------------------CCHHH--HH
T ss_pred cCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEec-CCCCc--------------------cchhh--ee
Confidence 3567899999999999999999998732 236664 444433 22211 11111 12
Q ss_pred HHHHHHccCCCcEEEEeeCCcee
Q 043544 406 SHCALTARNECKWVGFFDVDEFF 428 (619)
Q Consensus 406 n~Cl~r~~~~adWVlFlDaDEFL 428 (619)
|-....+...+|+++|-|+|=.-
T Consensus 104 NvGf~ea~~~~d~~ifHDVDLlP 126 (287)
T 3lw6_A 104 NVGFQFASDVYDYIAMHDVDLLP 126 (287)
T ss_dssp HHHHHHSCTTCCEEEEECTTEEE
T ss_pred cccHHHHhccCCEEEEecccccc
Confidence 22223345568999999999554
No 31
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=23.39 E-value=3e+02 Score=25.79 Aligned_cols=77 Identities=16% Similarity=0.171 Sum_probs=43.0
Q ss_pred HhcC-ccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeC---CC-cchHHHHHHHHHHHccCCCcEEEEeeCCceeecCC
Q 043544 358 AWLG-VERWFIYDNNSDDGIQKVIEELNLENYNVSRHNW---PW-IKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPR 432 (619)
Q Consensus 358 ~alG-VD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~W---p~-~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~ 432 (619)
+..| +++++|..+ ++...++++.+ |+.+..... .+ ...+ .+..+++... ...++++++++|.-+..+
T Consensus 39 ~~~~~~~~ivv~~~--~~~i~~~~~~~---g~~~~~~~~~~~~~~~~~~-~~v~~al~~~-~~~d~vlv~~~D~Pli~~- 110 (229)
T 1qwj_A 39 LDAGVFQSVWVSTD--HDEIENVAKQF---GAQVHRRSSETSKDSSTSL-DAIVEFLNYH-NEVDIVGNIQATSPCLHP- 110 (229)
T ss_dssp HHHTCCSEEEEEES--CHHHHHHHHHT---TCEEEECCGGGSSTTCCHH-HHHHHHHTTC-TTCSEEEEECTTCTTCCH-
T ss_pred HhCCCcCEEEEECC--hHHHHHHHHHc---CCEEEeChhhhcCCCCcHH-HHHHHHHHhc-CCCCEEEEecCCCCcCCH-
Confidence 3447 699998773 35555555544 654422111 11 1222 3444554332 357999999999966322
Q ss_pred CcccCCcccchHHHHHHhc
Q 043544 433 DHRLGLLGENSLRSLVANF 451 (619)
Q Consensus 433 ~~g~~~p~~~sL~dlL~~~ 451 (619)
..|..+++.+
T Consensus 111 ---------~~i~~l~~~~ 120 (229)
T 1qwj_A 111 ---------TDLQKVAEMI 120 (229)
T ss_dssp ---------HHHHHHHHHH
T ss_pred ---------HHHHHHHHHH
Confidence 2577777654
No 32
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=21.96 E-value=2.4e+02 Score=27.24 Aligned_cols=69 Identities=6% Similarity=-0.037 Sum_probs=36.1
Q ss_pred HhcCccEEEEEEcCCC-ccHHHHHHHHhcCCccEEEeeCCCcchHHHHHHHHHHHccCCCcEEEEeeCCcee
Q 043544 358 AWLGVERWFIYDNNSD-DGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFF 428 (619)
Q Consensus 358 ~alGVD~f~IYDNgSt-D~T~eIL~~y~~~G~~Vt~~~Wp~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL 428 (619)
...|+++|+|..+... +...+.+......|+++....-+.......++..++... ..++++++..|.++
T Consensus 66 ~~~g~~~iivv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~--~~~~~lv~~~D~~~ 135 (269)
T 4ecm_A 66 KQCDITDIMIITGKEHMGDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFV--GNDRMVVILGDNIF 135 (269)
T ss_dssp HHTTCCEEEEEECTTTHHHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHH--TTSEEEEEETTEEE
T ss_pred HHCCCCEEEEECChhhHHHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhc--CCCcEEEEeCCccC
Confidence 3459999999887532 333333322112244454432222223333443333322 26899999999966
No 33
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=21.16 E-value=7.2e+02 Score=25.91 Aligned_cols=109 Identities=8% Similarity=0.044 Sum_probs=64.9
Q ss_pred CceEEEEEEeecchHHHHHHHHHHHHhcCccEEEE-EEcCCCccHHHHHHHHhcCCccEEEe------eCCCcchHHHHH
Q 043544 333 GKFELCVCTMLWNQASLIREWIMYHAWLGVERWFI-YDNNSDDGIQKVIEELNLENYNVSRH------NWPWIKTQEAGF 405 (619)
Q Consensus 333 kk~~L~VctIvkNEA~~L~EWIeyH~alGVD~f~I-YDNgStD~T~eIL~~y~~~G~~Vt~~------~Wp~~~~Q~~A~ 405 (619)
.++.||...++......|...+..... .-..++| +|..+.+...+.+..+...-.+|.+. .|.+ ..|.+|.
T Consensus 82 ~~~kiAflil~h~d~~~l~rll~~ly~-p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg-~S~v~A~ 159 (391)
T 2gak_A 82 VGFPIAYSIVVHHKIEMLDRLLRAIYM-PQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYAS-WTRVKAD 159 (391)
T ss_dssp HTSCEEEEEEECSCHHHHHHHHHHHCC-TTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTS-HHHHHHH
T ss_pred cCCCEEEEEEecCCHHHHHHHHHHHhC-CCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCC-chHHHHH
Confidence 346788888888887778777763211 2334444 45555555555544333222245543 2332 2455555
Q ss_pred HHHHHHc---cCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHhcC
Q 043544 406 SHCALTA---RNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFS 452 (619)
Q Consensus 406 n~Cl~r~---~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~~~ 452 (619)
-+|+... ....+|++.+-...+- +.+.. .|.++|....
T Consensus 160 l~ll~~aL~~~~~w~yfilLSgsD~P-Lkt~~--------~i~~~l~~~~ 200 (391)
T 2gak_A 160 LNCMKDLYRMNANWKYLINLCGMDFP-IKTNL--------EIVRKLKCST 200 (391)
T ss_dssp HHHHHHHHHHCSCCCEEEEEETTCEE-SSCHH--------HHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCEEEEecCCCcc-ccCHH--------HHHHHHHhcC
Confidence 5665432 3478999999999998 45554 7889988754
No 34
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.53 E-value=2.7e+02 Score=24.16 Aligned_cols=52 Identities=13% Similarity=0.402 Sum_probs=42.1
Q ss_pred EeecchHHHHHHHHHHHHhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEE
Q 043544 341 TMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSR 392 (619)
Q Consensus 341 tIvkNEA~~L~EWIeyH~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~ 392 (619)
.|..|.-+.|.|.++.-..+|..-|.+..+....+..+.-+.....|+.|.-
T Consensus 55 liisndkqllkemlelisklgykvflllqdqdeneleefkrkiesqgyevrk 106 (134)
T 2lci_A 55 LIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRK 106 (134)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCCEEEEEECSCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEcCcHHHHHHHHHHHHHhCceeEEEeecCchhHHHHHHHHHHhCCeeeee
Confidence 4557888999999998888899988888877666778888888888997643
Done!