Query 043552
Match_columns 154
No_of_seqs 118 out of 1002
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 10:16:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043552.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043552hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 9.5E-42 3.3E-46 258.4 5.7 109 27-136 2-115 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 1.8E-41 6.2E-46 247.6 6.3 106 27-133 1-108 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 4.8E-40 1.6E-44 242.4 6.8 105 29-134 2-110 (116)
4 2cbp_A Cucumber basic protein; 100.0 1.1E-38 3.7E-43 228.0 7.5 96 29-128 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 1.1E-34 3.7E-39 205.5 8.7 91 29-128 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.4 8.6E-13 3E-17 97.6 9.7 97 26-128 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.3 1.6E-11 5.6E-16 83.5 7.7 85 30-128 4-91 (91)
8 1pmy_A Pseudoazurin; electron 99.2 4.2E-11 1.5E-15 88.0 8.3 75 50-131 21-96 (123)
9 2cal_A Rusticyanin; iron respi 99.2 2.9E-11 9.9E-16 91.8 7.0 77 51-128 62-154 (154)
10 1paz_A Pseudoazurin precursor; 99.2 6.6E-11 2.3E-15 86.9 8.0 73 50-130 21-95 (123)
11 3ef4_A Pseudoazurin, blue copp 99.1 5.2E-11 1.8E-15 88.0 5.7 87 34-133 10-99 (124)
12 3tu6_A Pseudoazurin (blue copp 99.1 8.2E-11 2.8E-15 87.1 6.2 77 50-133 23-100 (127)
13 3erx_A Pseudoazurin; copper pr 99.1 1.2E-10 4.1E-15 85.7 6.8 75 50-131 21-96 (123)
14 1iuz_A Plastocyanin; electron 99.1 3.7E-10 1.3E-14 78.6 7.0 91 29-128 2-98 (98)
15 2gim_A Plastocyanin; beta shee 99.0 4.8E-10 1.6E-14 78.4 6.9 88 30-128 5-105 (106)
16 2aan_A Auracyanin A; cupredoxi 99.0 2.2E-09 7.4E-14 79.1 10.7 95 27-128 17-139 (139)
17 1plc_A Plastocyanin; electron 99.0 7.7E-10 2.6E-14 76.7 7.5 90 30-128 2-99 (99)
18 1kdj_A Plastocyanin; electron 99.0 2.2E-09 7.7E-14 74.6 7.9 91 30-128 2-102 (102)
19 2plt_A Plastocyanin; electron 98.9 1.5E-09 5.1E-14 74.9 6.2 91 29-128 2-98 (98)
20 1b3i_A PETE protein, protein ( 98.9 2.8E-09 9.7E-14 73.5 7.2 88 30-128 4-97 (97)
21 1byp_A Protein (plastocyanin); 98.9 3.3E-09 1.1E-13 73.4 7.1 90 30-128 2-99 (99)
22 1pcs_A Plastocyanin; electron 98.8 7.6E-09 2.6E-13 71.4 6.1 90 30-128 4-98 (98)
23 2ux6_A Pseudoazurin; type-1 co 98.6 1.1E-07 3.8E-12 69.4 6.4 74 50-132 21-95 (122)
24 3c75_A Amicyanin; copper prote 98.6 2.1E-07 7.1E-12 68.5 7.6 71 50-128 60-132 (132)
25 4hci_A Cupredoxin 1; structura 98.4 1.6E-07 5.6E-12 65.3 4.1 67 50-128 28-100 (100)
26 3cvb_A Plastocyanin; cupredoxi 98.4 1.6E-06 5.6E-11 59.9 8.3 89 30-128 4-104 (105)
27 1cuo_A Protein (azurin ISO-2); 98.3 4.4E-06 1.5E-10 61.6 9.8 92 30-129 4-129 (129)
28 3ay2_A Lipid modified azurin p 98.3 2.6E-06 8.8E-11 65.7 7.9 93 29-129 43-167 (167)
29 1id2_A Amicyanin; beta barrel, 98.2 4.1E-06 1.4E-10 59.0 7.2 70 50-128 34-106 (106)
30 2ov0_A Amicyanin; beta-sandwic 98.2 3.9E-06 1.3E-10 58.9 6.7 67 50-128 33-105 (105)
31 2iaa_C Azurin; quinoprotein, t 98.1 2E-05 6.7E-10 58.1 9.0 90 31-128 4-127 (128)
32 1nwp_A Azurin; electron transp 98.1 7.8E-06 2.7E-10 60.2 6.5 91 30-128 4-128 (128)
33 2ccw_A Azurin II, AZN-2; elect 98.0 2.1E-05 7.1E-10 58.0 8.5 91 30-128 4-128 (129)
34 1iko_P Ephrin-B2; greek KEY, g 97.5 8.6E-05 2.9E-09 57.9 4.1 82 53-134 25-145 (178)
35 2x11_B Ephrin-A5; receptor-sig 97.4 0.00036 1.2E-08 54.3 6.5 80 51-133 51-166 (177)
36 1iby_A Nitrosocyanin; RED copp 97.4 0.00057 2E-08 47.8 7.0 68 50-129 38-112 (112)
37 2cua_A Protein (CUA); CUA cent 97.3 0.0014 4.9E-08 48.3 8.6 68 50-129 60-135 (135)
38 3czu_B Ephrin-A1; ATP-binding, 96.9 0.002 6.7E-08 50.3 6.5 79 51-132 49-163 (182)
39 3fsa_A Azurin; copper, cupredo 96.8 0.015 5E-07 42.7 10.0 88 31-128 5-125 (125)
40 1shx_A Ephrin-A5; ephrin signa 96.5 0.0073 2.5E-07 45.1 6.9 78 51-131 22-135 (138)
41 2dv6_A Nitrite reductase; elec 96.4 0.0052 1.8E-07 52.3 6.4 76 49-132 54-135 (447)
42 3s8f_B Cytochrome C oxidase su 96.4 0.019 6.7E-07 43.9 8.7 68 50-129 93-168 (168)
43 3sbq_A Nitrous-oxide reductase 96.1 0.015 5.2E-07 52.8 7.6 68 50-129 558-637 (638)
44 1fwx_A Nitrous oxide reductase 95.8 0.021 7.2E-07 51.6 7.6 69 50-130 513-593 (595)
45 3d12_B Ephrin-B3; beta propell 94.8 0.039 1.3E-06 41.3 4.9 77 52-128 22-140 (141)
46 2vsm_B Ephrin-B2; developmenta 94.5 0.071 2.4E-06 39.7 5.8 77 53-129 24-139 (140)
47 2wo3_B Ephrin-A2; transferase- 93.5 0.14 4.7E-06 38.9 5.7 80 51-133 31-147 (157)
48 1oe1_A Dissimilatory copper-co 91.5 0.71 2.4E-05 37.7 8.0 77 51-131 66-154 (336)
49 1mzy_A Copper-containing nitri 91.0 0.75 2.6E-05 37.5 7.6 77 51-131 65-154 (333)
50 1oe1_A Dissimilatory copper-co 90.4 0.26 8.7E-06 40.3 4.3 49 98-146 286-336 (336)
51 3gdc_A Multicopper oxidase; be 90.1 1 3.6E-05 36.1 7.6 80 51-132 67-157 (288)
52 1kbv_A ANIA, major outer membr 89.4 0.63 2.2E-05 38.1 5.9 77 51-131 71-158 (327)
53 2zoo_A Probable nitrite reduct 85.2 0.86 3E-05 38.5 4.4 77 50-131 60-148 (442)
54 2bw4_A Copper-containing nitri 84.6 1.9 6.6E-05 35.1 6.2 77 51-131 72-160 (340)
55 1fft_B Ubiquinol oxidase; elec 83.3 4.3 0.00015 33.7 7.8 66 51-128 152-225 (315)
56 1zpu_A Iron transport multicop 81.7 3.5 0.00012 36.1 7.0 79 51-132 35-127 (534)
57 3g5w_A Multicopper oxidase typ 80.6 5.7 0.0002 32.3 7.5 78 51-131 35-127 (318)
58 2gsm_B Cytochrome C oxidase su 79.8 4.5 0.00015 32.6 6.5 67 52-130 173-247 (262)
59 3hei_B Ephrin-A1; EPH receptor 77.4 2.8 9.7E-05 30.7 4.3 36 51-86 21-67 (132)
60 1aoz_A Ascorbate oxidase; oxid 76.8 6.1 0.00021 34.5 7.0 78 51-131 35-125 (552)
61 3hb3_B Cytochrome C oxidase su 76.6 6.2 0.00021 32.5 6.6 67 52-130 191-265 (298)
62 1cyx_A CYOA; electron transpor 76.5 4.3 0.00015 31.8 5.3 66 51-128 42-115 (205)
63 1v10_A Laccase; multicopper bl 76.2 6 0.0002 34.4 6.7 78 51-131 56-151 (521)
64 1mzy_A Copper-containing nitri 76.0 2.5 8.4E-05 34.4 4.0 36 98-133 286-322 (333)
65 3t6v_A Laccase; beta barrel, o 75.2 6.6 0.00023 34.1 6.7 80 51-133 36-133 (495)
66 2zwn_A Two-domain type laccase 74.2 4.8 0.00017 32.9 5.3 78 51-131 36-128 (339)
67 2q9o_A Laccase-1; multicopper 73.9 5.3 0.00018 35.1 5.8 78 51-131 68-159 (559)
68 3pxl_A Laccase; 4-copper prote 73.1 8 0.00027 33.6 6.7 80 51-133 35-132 (499)
69 3sqr_A Laccase; multicopper ox 69.4 9.9 0.00034 33.9 6.6 34 98-131 156-189 (580)
70 2uxt_A Protein SUFI, SUFI; oxi 68.4 5.9 0.0002 33.8 4.8 76 51-131 51-140 (451)
71 3tas_A Small laccase, multi-co 65.7 32 0.0011 27.6 8.5 32 102-133 113-150 (313)
72 1sdd_A Coagulation factor V; c 64.1 17 0.00057 29.2 6.4 82 51-133 61-170 (306)
73 1v54_B Cytochrome C oxidase po 63.8 12 0.00041 29.4 5.4 31 98-130 183-216 (227)
74 2r7e_B Coagulation factor VIII 63.5 7 0.00024 36.0 4.5 79 51-133 200-301 (770)
75 2j5w_A Ceruloplasmin, ferroxid 61.9 7.6 0.00026 36.9 4.5 78 51-133 633-721 (1065)
76 3zx1_A Oxidoreductase, putativ 61.7 9.3 0.00032 33.1 4.8 78 51-133 83-175 (481)
77 3aw5_A Multicopper oxidase; be 60.6 4.6 0.00016 34.5 2.6 75 51-133 39-130 (448)
78 2xu9_A Laccase; oxidoreductase 59.1 13 0.00043 31.4 5.1 78 51-131 48-137 (439)
79 1hfu_A Laccase 1; oxidoreducta 58.4 15 0.00053 31.6 5.6 79 50-131 34-130 (503)
80 3iuw_A Activating signal coint 58.3 4.6 0.00016 27.3 1.8 16 52-67 36-52 (83)
81 3gdc_A Multicopper oxidase; be 56.8 4.7 0.00016 32.2 1.9 79 50-129 195-288 (288)
82 2bw4_A Copper-containing nitri 56.6 11 0.00038 30.4 4.2 37 98-134 292-329 (340)
83 3kw8_A Laccase, putative coppe 56.5 7.6 0.00026 30.7 3.1 84 50-133 168-269 (276)
84 2dv6_A Nitrite reductase; elec 54.9 8.1 0.00028 32.4 3.1 45 98-146 402-446 (447)
85 1kbv_A ANIA, major outer membr 54.4 9 0.00031 31.1 3.3 36 98-133 275-311 (327)
86 1sdd_A Coagulation factor V; c 54.0 1.6 5.5E-05 35.3 -1.4 76 51-130 216-301 (306)
87 3kw8_A Laccase, putative coppe 52.1 21 0.00071 28.1 5.0 80 51-133 37-144 (276)
88 2j5w_A Ceruloplasmin, ferroxid 51.1 9.9 0.00034 36.1 3.4 80 51-135 272-362 (1065)
89 3t9w_A Small laccase, multi-co 48.1 96 0.0033 24.6 8.5 31 103-133 130-166 (299)
90 3cg8_A Laccase; oxidoreductase 45.5 13 0.00043 30.6 2.8 82 51-134 210-311 (343)
91 2r7e_A Coagulation factor VIII 45.2 13 0.00044 34.0 3.0 76 51-134 245-334 (742)
92 3t9w_A Small laccase, multi-co 43.8 11 0.00038 30.3 2.1 33 102-134 260-292 (299)
93 3l6w_A Hemocyanin 1; cupredoxi 42.1 24 0.00081 31.1 4.1 74 51-128 412-491 (491)
94 4dny_A Metalloprotease STCE; m 40.8 8.6 0.00029 28.0 0.9 18 56-73 77-94 (126)
95 2zoo_A Probable nitrite reduct 40.6 23 0.0008 29.5 3.8 76 51-132 205-300 (442)
96 3tas_A Small laccase, multi-co 40.2 17 0.00057 29.3 2.7 32 103-134 245-276 (313)
97 1yel_A AT1G16640; CESG, protei 38.1 11 0.00037 25.6 1.1 19 49-67 73-91 (104)
98 3abg_A Bilirubin oxidase; clea 37.4 83 0.0028 27.3 6.9 88 52-139 71-167 (534)
99 1sdd_B Coagulation factor V; c 35.3 27 0.00091 30.9 3.4 76 51-129 240-327 (647)
100 2nms_A CMRF35-like-molecule 1; 33.6 11 0.00039 25.6 0.6 33 101-135 84-117 (124)
101 4i1k_A B3 domain-containing tr 33.1 18 0.00062 26.4 1.6 26 49-74 112-137 (146)
102 2k75_A Uncharacterized protein 28.8 21 0.0007 24.4 1.3 30 30-64 41-70 (106)
103 2qcp_X Cation efflux system pr 28.7 37 0.0013 22.2 2.5 16 51-66 51-66 (80)
104 2vb2_X Copper protein, cation 28.7 36 0.0012 22.7 2.5 16 51-66 59-74 (88)
105 3od3_A Blue copper oxidase CUE 28.6 30 0.001 30.0 2.6 76 51-131 49-138 (488)
106 2zwn_A Two-domain type laccase 28.0 1.2E+02 0.004 24.4 6.0 34 98-131 240-279 (339)
107 1xne_A Hypothetical protein PF 27.3 14 0.00049 26.1 0.2 12 52-63 33-44 (113)
108 1sdd_B Coagulation factor V; c 27.1 1.1E+02 0.0038 26.9 6.1 81 51-133 70-179 (647)
109 3cg8_A Laccase; oxidoreductase 27.1 55 0.0019 26.6 3.8 29 105-133 151-185 (343)
110 2l55_A SILB,silver efflux prot 26.4 27 0.00092 23.1 1.5 18 50-67 44-61 (82)
111 3rrq_A Protein PD-1, programme 25.3 26 0.00089 23.8 1.3 10 101-110 84-93 (129)
112 2hd9_A UPF0310 protein PH1033; 23.7 19 0.00064 26.2 0.3 43 37-80 19-72 (145)
113 1ed7_A Chitinase A1, (CHBD-CHI 23.3 24 0.0008 20.6 0.6 16 47-62 1-16 (45)
114 3g5w_A Multicopper oxidase typ 23.0 80 0.0027 25.3 4.0 34 98-131 239-278 (318)
115 2g23_A PHS, phenoxazinone synt 23.0 2.1E+02 0.0071 25.4 7.0 34 98-131 158-196 (612)
116 2z0t_A Putative uncharacterize 22.7 32 0.0011 24.1 1.3 12 51-62 31-42 (109)
117 2z0b_A GDE5, KIAA1434, putativ 21.7 51 0.0017 23.3 2.3 38 29-66 24-75 (131)
118 4he6_A Peptidase family U32; u 21.7 54 0.0018 21.3 2.3 17 51-67 27-43 (89)
119 2hzs_I RNA polymerase II media 20.6 1 3.5E-05 23.9 -5.1 19 51-69 4-22 (27)
120 2laa_A Beta/alpha-amylase; SBD 20.4 69 0.0023 22.1 2.7 31 37-67 27-65 (104)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=9.5e-42 Score=258.36 Aligned_cols=109 Identities=25% Similarity=0.527 Sum_probs=98.6
Q ss_pred ceeEEEecCCCCCCCC---CCCccccCCceeEeCCEEEEEEcCCcccEEEE-CccccccccCCCCcccccccCcceEEc-
Q 043552 27 KSEVYTVGGDEQWNTG---ANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEV-TQATYRSCVASSGVIGKYESGNDQVTL- 101 (154)
Q Consensus 27 ~a~~~~VGg~~GW~~~---~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V-~~~~y~~C~~~~~~~~~~~~G~~~v~l- 101 (154)
+|++|+|||+.||+++ .+|++|+++++|++||+|+|+|.++.|+|+|| ++++|+.|+.++ ++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~-p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVN-SDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTT-SCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCC-ccccccCCCeEEEec
Confidence 5789999999999998 78999999999999999999999999999999 999999999986 56788999999999
Q ss_pred cCCceEEEEcCCCCCCCCCCeEEEEeeCCCCCccc
Q 043552 102 TEAKKYWFICNVAGHCLGGMRFSIDVKENPTLIQQ 136 (154)
Q Consensus 102 ~~~G~~YFic~v~~HC~~GmKl~I~V~~~~~~~~~ 136 (154)
+++|++||||++++||++||||+|+|.+..+++++
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC-----
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCCCCCC
Confidence 99999999999999999999999999877554433
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1.8e-41 Score=247.56 Aligned_cols=106 Identities=31% Similarity=0.697 Sum_probs=97.3
Q ss_pred ceeEEEecCCCCCCCC--CCCccccCCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCcceEEccCC
Q 043552 27 KSEVYTVGGDEQWNTG--ANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGNDQVTLTEA 104 (154)
Q Consensus 27 ~a~~~~VGg~~GW~~~--~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~~v~l~~~ 104 (154)
+|++|+|||+.||+.+ .+|++||++++|++||+|+|+|.++.|+|+||++++|+.|+.++ ++..+++|+++|+|+++
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~-p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS-PAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSS-CSEEECSSEEEEECCSS
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCC-cccccCCCCEEEEECCC
Confidence 4688999999999998 79999999999999999999999999999999999999999986 57889999999999999
Q ss_pred ceEEEEcCCCCCCCCCCeEEEEeeCCCCC
Q 043552 105 KKYWFICNVAGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 105 G~~YFic~v~~HC~~GmKl~I~V~~~~~~ 133 (154)
|++||||++++||++||||+|+|.+++++
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~s~ 108 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGSSS 108 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC----
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCCCC
Confidence 99999999999999999999999877664
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=4.8e-40 Score=242.44 Aligned_cols=105 Identities=28% Similarity=0.561 Sum_probs=94.1
Q ss_pred eEEEecCCCCCCCC---CCCccccCCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCcceEEccCCc
Q 043552 29 EVYTVGGDEQWNTG---ANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGNDQVTLTEAK 105 (154)
Q Consensus 29 ~~~~VGg~~GW~~~---~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~~v~l~~~G 105 (154)
++|+|||+.||+++ .+|+.|+++++|++||+|+|+|.+++|+|+||++++|+.|+.++ ++..+++|+++|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~-~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKEN-PISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSS-CSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCC-CccccCCCCeEEEECCCC
Confidence 47999999999974 68999999999999999999999999999999999999999986 567889999999999999
Q ss_pred eEEEEcCCCCCCCCCCeEEE-EeeCCCCCc
Q 043552 106 KYWFICNVAGHCLGGMRFSI-DVKENPTLI 134 (154)
Q Consensus 106 ~~YFic~v~~HC~~GmKl~I-~V~~~~~~~ 134 (154)
++||||++++||++||||+| +|.+++++.
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~~~~ 110 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGGAGG 110 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC-----
T ss_pred CEEEECCCCCccccCCEEEEEEECCCCCCC
Confidence 99999999999999999999 887665543
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.1e-38 Score=228.02 Aligned_cols=96 Identities=36% Similarity=0.788 Sum_probs=90.8
Q ss_pred eEEEecCCCCCCCCCCCccccCCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCcceEEccCCceEE
Q 043552 29 EVYTVGGDEQWNTGANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGNDQVTLTEAKKYW 108 (154)
Q Consensus 29 ~~~~VGg~~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~~v~l~~~G~~Y 108 (154)
++|+|||+.||++ +|++||++++|++||+|+|+|.+++|+|+||++++|++|++++ ++..+++|+++|+| ++|++|
T Consensus 1 ~~~~VG~~~GW~~--~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~-~~~~~~~G~~~v~L-~~g~~y 76 (96)
T 2cbp_A 1 AVYVVGGSGGWTF--NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPA-GAKVYTSGRDQIKL-PKGQSY 76 (96)
T ss_dssp CEEETTGGGCSCS--SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCT-TCEEECSSEEEEEC-CSEEEE
T ss_pred CEEEECCcCCCcc--ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCC-CcccccCCCeEEEe-cCCCEE
Confidence 4799999999998 6999999999999999999999999999999999999999986 56788999999999 899999
Q ss_pred EEcCCCCCCCCCCeEEEEee
Q 043552 109 FICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 109 Fic~v~~HC~~GmKl~I~V~ 128 (154)
|||++++||++||||+|+|+
T Consensus 77 Fic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 77 FICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EECCSTTTGGGTCEEEEEEC
T ss_pred EEcCCCCccccCCEEEEEEC
Confidence 99999999999999999984
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=1.1e-34 Score=205.52 Aligned_cols=91 Identities=42% Similarity=0.797 Sum_probs=85.0
Q ss_pred eEEEecCCCCCCCCCCCccccCCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCcceEEccCCceEE
Q 043552 29 EVYTVGGDEQWNTGANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGNDQVTLTEAKKYW 108 (154)
Q Consensus 29 ~~~~VGg~~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~~v~l~~~G~~Y 108 (154)
++|+| ||+.+ +.|+++++|++||+|+|+|.+++|+|+||++++|++|+.++ ++..+++|+++|+|+ +|++|
T Consensus 1 ~~y~V----gW~~~---~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~-~~~~~~~G~~~v~L~-~g~~y 71 (91)
T 1f56_A 1 AVYNI----GWSFN---VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPR-GARTYSSGQDRIKLT-RGQNY 71 (91)
T ss_dssp CEEEE----ECSSS---CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCT-TCEEECSSEEEEECC-SEEEE
T ss_pred CEEEE----eCCCC---CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCC-CcccccCCCcEEEeC-CCCeE
Confidence 36888 89987 89999999999999999999999999999999999999986 467889999999996 89999
Q ss_pred EEcCCCCCCCCCCeEEEEee
Q 043552 109 FICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 109 Fic~v~~HC~~GmKl~I~V~ 128 (154)
|||++++||++||||+|+|.
T Consensus 72 Fic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 72 FICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EECCSTTTTTTTCEEEEEEC
T ss_pred EEcCCCCccccCCEEEEEEC
Confidence 99999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.42 E-value=8.6e-13 Score=97.58 Aligned_cols=97 Identities=19% Similarity=0.315 Sum_probs=65.8
Q ss_pred cceeEEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-----CcccEEEECcc-ccccc----------------
Q 043552 26 IKSEVYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-----GQHNVYEVTQA-TYRSC---------------- 82 (154)
Q Consensus 26 a~a~~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-----~~HsV~~V~~~-~y~~C---------------- 82 (154)
+...++.|+-. .+|.+.+ +.++++.||+++|.+.+ ..|+++..... ++..+
T Consensus 14 ~~~~~v~V~~~~~~~~F~P------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP 87 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC
T ss_pred CCCEEEEEEEeCCCceEeC------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc
Confidence 34456777753 3577754 47899999999998876 48998876422 22111
Q ss_pred -cCCC-----CcccccccCcceEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 83 -VASS-----GVIGKYESGNDQVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 83 -~~~~-----~~~~~~~~G~~~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+..+ ..+..-.++..+++++++|.|||+|++++||+.|||+.|+|.
T Consensus 88 ~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 88 PDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 0000 011111233346788899999999999999999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.26 E-value=1.6e-11 Score=83.54 Aligned_cols=85 Identities=21% Similarity=0.274 Sum_probs=60.6
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECccccccccCCCCcccccccC-cceEEccCCce
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQATYRSCVASSGVIGKYESG-NDQVTLTEAKK 106 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~y~~C~~~~~~~~~~~~G-~~~v~l~~~G~ 106 (154)
+..+|++ .++.+.+ +.+++++||+|+|.+.. ..|+|.......+. .. ......| ...++++++|+
T Consensus 4 ~v~~~~~~~~~~f~P------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~---~~---~~~~~~g~~~~~~f~~~G~ 71 (91)
T 1bxv_A 4 AIKMGADNGMLAFEP------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS---HK---DLAFSPGETFEATFSEPGT 71 (91)
T ss_dssp EEEESCTTSCSSEES------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC---EE---EEECSTTCEEEEECCSCEE
T ss_pred EEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC---cc---cceeCCCCEEEEEeCCCEE
Confidence 4556754 3466543 36899999999999885 58999765432221 00 0123445 34788999999
Q ss_pred EEEEcCCCCCCCCCCeEEEEee
Q 043552 107 YWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 107 ~YFic~v~~HC~~GmKl~I~V~ 128 (154)
|+|+|+ .||..||+..|.|.
T Consensus 72 y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCccCCCEEEEEEC
Confidence 999999 89999999999984
No 8
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=99.21 E-value=4.2e-11 Score=87.96 Aligned_cols=75 Identities=23% Similarity=0.288 Sum_probs=55.2
Q ss_pred CCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCcc-eEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 50 QQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGND-QVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~-~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+.+++++||+|+|.+....|+|+... .|.+..........|.+ +++++++|+|+|+|+ .||+.||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 37899999999999987789997542 23222100011123433 789999999999999 59999999999998
Q ss_pred CCC
Q 043552 129 ENP 131 (154)
Q Consensus 129 ~~~ 131 (154)
+++
T Consensus 94 ~~~ 96 (123)
T 1pmy_A 94 DKR 96 (123)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 9
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.20 E-value=2.9e-11 Score=91.83 Aligned_cols=77 Identities=17% Similarity=0.291 Sum_probs=58.8
Q ss_pred CceeEeCCEEEEEEcCC----cccEEEEC-ccccccccCCCCccc------ccccCc---c--eEEccCCceEEEEcCCC
Q 043552 51 QYNYSIGDVLVFKYTEG----QHNVYEVT-QATYRSCVASSGVIG------KYESGN---D--QVTLTEAKKYWFICNVA 114 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~----~HsV~~V~-~~~y~~C~~~~~~~~------~~~~G~---~--~v~l~~~G~~YFic~v~ 114 (154)
.+++++||+|+|.+.+. .|++..++ ...|+.|......+. ...+|. . ++++ ++|+|||+|+.+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 57899999999999763 69999884 457777865432111 123443 3 4577 999999999999
Q ss_pred CCCCCCCeEEEEee
Q 043552 115 GHCLGGMRFSIDVK 128 (154)
Q Consensus 115 ~HC~~GmKl~I~V~ 128 (154)
+||+.||+..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 10
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=99.18 E-value=6.6e-11 Score=86.93 Aligned_cols=73 Identities=21% Similarity=0.308 Sum_probs=54.4
Q ss_pred CCceeEeCCEEEEEEcCCcccEEEECccccccccCCCC-cccccccCcc-eEEccCCceEEEEcCCCCCCCCCCeEEEEe
Q 043552 50 QQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSG-VIGKYESGND-QVTLTEAKKYWFICNVAGHCLGGMRFSIDV 127 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~-~~~~~~~G~~-~v~l~~~G~~YFic~v~~HC~~GmKl~I~V 127 (154)
+.+++++||+|+|.+....|+|+.. +.|.+... ... ...|.+ +++++++|+|+|+|+ .||+.||+..|+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~-~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V 92 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFK-SKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAV 92 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCB-CCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CEEEECCCCEEEEEECCCCeEEEEe-----cccCCCCcccee-cCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEE
Confidence 3789999999999999878999653 12322210 111 123433 789999999999998 6999999999999
Q ss_pred eCC
Q 043552 128 KEN 130 (154)
Q Consensus 128 ~~~ 130 (154)
.++
T Consensus 93 ~~~ 95 (123)
T 1paz_A 93 GDS 95 (123)
T ss_dssp SSS
T ss_pred cCC
Confidence 874
No 11
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=99.14 E-value=5.2e-11 Score=87.99 Aligned_cols=87 Identities=18% Similarity=0.106 Sum_probs=62.2
Q ss_pred cCCCC--CCCCCCCccccCCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCc-ceEEccCCceEEEE
Q 043552 34 GGDEQ--WNTGANFDSWSQQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGN-DQVTLTEAKKYWFI 110 (154)
Q Consensus 34 Gg~~G--W~~~~~Y~~Was~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~-~~v~l~~~G~~YFi 110 (154)
+|++| +.+.+ +..++++||+|+|.+....|+|...+ .+.+..........|. .+++++++|.|.|+
T Consensus 10 ~g~~G~~~~F~P------~~i~V~~GDTV~f~n~~~~Hnv~~~~-----~~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~ 78 (124)
T 3ef4_A 10 KDDAGNTMVFQP------GFVKVEAGDTVKFVPTDKSHNAESVR-----EVWPEGVAPVKGGFSKEVVFNAEKEGLYVLK 78 (124)
T ss_dssp ECTTSCEEEEES------SEEEECTTCEEEEECSSSSCCCEECT-----TTSCTTSCCCBCCTTCCEEEECCSSEEEEEE
T ss_pred cCCCCceeEEeC------CEEEECCCCEEEEEECCCCccEEEeC-----CcCCCCccccccCCCCEEEEEeCCCeEEEEE
Confidence 34444 66654 37999999999999998899996532 1222211001123344 37899999999999
Q ss_pred cCCCCCCCCCCeEEEEeeCCCCC
Q 043552 111 CNVAGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 111 c~v~~HC~~GmKl~I~V~~~~~~ 133 (154)
|+ .||..||+..|+|.++..+
T Consensus 79 C~--~H~~~GM~G~I~V~~p~~l 99 (124)
T 3ef4_A 79 CA--PHYGMGMVVLVQVGKPVNL 99 (124)
T ss_dssp CT--TTGGGTCEEEEEESSCTTH
T ss_pred cC--CCCcCCCEEEEEECCCCCh
Confidence 98 8999999999999875443
No 12
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=99.12 E-value=8.2e-11 Score=87.11 Aligned_cols=77 Identities=23% Similarity=0.205 Sum_probs=56.6
Q ss_pred CCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCc-ceEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 50 QQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGN-DQVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~-~~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+..++++||+|+|.+.+..|+|...+. +.+..........|. .+++++++|.|+|+|+ .||..||+..|+|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 478999999999999987899965322 222111000112343 4899999999999999 79999999999999
Q ss_pred CCCCC
Q 043552 129 ENPTL 133 (154)
Q Consensus 129 ~~~~~ 133 (154)
+++..
T Consensus 96 ~~~~~ 100 (127)
T 3tu6_A 96 EPANL 100 (127)
T ss_dssp SCTTH
T ss_pred cCCCc
Confidence 86644
No 13
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=99.11 E-value=1.2e-10 Score=85.70 Aligned_cols=75 Identities=25% Similarity=0.243 Sum_probs=55.1
Q ss_pred CCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCc-ceEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 50 QQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGN-DQVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~-~~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+..++++||+|+|.+.+..|+|...+. +.+..........|. .+++++++|.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 478999999999999988899965321 222210000112333 4789999999999999 89999999999998
Q ss_pred CCC
Q 043552 129 ENP 131 (154)
Q Consensus 129 ~~~ 131 (154)
+.+
T Consensus 94 ~~~ 96 (123)
T 3erx_A 94 DAP 96 (123)
T ss_dssp SSC
T ss_pred CCC
Confidence 744
No 14
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=99.06 E-value=3.7e-10 Score=78.60 Aligned_cols=91 Identities=21% Similarity=0.295 Sum_probs=60.9
Q ss_pred eEEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcCC-cccEEEECc---cccccccCCCCcccccccCcc-eEEcc
Q 043552 29 EVYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTEG-QHNVYEVTQ---ATYRSCVASSGVIGKYESGND-QVTLT 102 (154)
Q Consensus 29 ~~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~-~HsV~~V~~---~~y~~C~~~~~~~~~~~~G~~-~v~l~ 102 (154)
.+..+|++ .++.+.+ +..++++||+|+|.+..+ .|+|...+. ++++.+..+.. ......|.+ .++++
T Consensus 2 ~~V~m~~~~~~~~F~P------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~-~~~~~~g~~~~~tf~ 74 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVP------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYD-DYLNSKGETVVRKLS 74 (98)
T ss_dssp EEEEESCTTSCCSEES------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEE-EEECSTTCEEEEECC
T ss_pred EEEEEecCCCCcEEeC------CEEEECCCCEEEEEECCCCCEEEEEeCCCCcccccccccccc-ccccCCCCEEEEEcC
Confidence 34556654 3455543 378999999999998864 899865431 12222211100 012345544 78899
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 103 EAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 103 ~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
++|+|+|+|+. ||+.||+..|.|.
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999995 9999999999984
No 15
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.04 E-value=4.8e-10 Score=78.43 Aligned_cols=88 Identities=22% Similarity=0.214 Sum_probs=59.6
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECcccc-----cc--ccCCCCcccccccCc-ceE
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQATY-----RS--CVASSGVIGKYESGN-DQV 99 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~y-----~~--C~~~~~~~~~~~~G~-~~v 99 (154)
+..+|.+ .++.+.+ +.+++++||+|+|.+.. ..|++........ +. +.... .....|. ..+
T Consensus 5 ~V~~~~~~~~~~F~P------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~---~~~~pG~~~~~ 75 (106)
T 2gim_A 5 TVKLGSDKGLLVFEP------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQ---LLMSPGQSTST 75 (106)
T ss_dssp EEEESCTTCCSSEES------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCS---CCCSTTCEEEE
T ss_pred EEEEEecCCcceEcC------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccc---eeeCCCCEEEE
Confidence 4567653 4566643 36899999999999775 4899875432110 00 00111 1123444 367
Q ss_pred Ec---cCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 100 TL---TEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 100 ~l---~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
++ +++|.|+|+|. .||+.||+..|+|.
T Consensus 76 ~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 76 TFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp ECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 88 88999999999 89999999999996
No 16
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.03 E-value=2.2e-09 Score=79.15 Aligned_cols=95 Identities=21% Similarity=0.301 Sum_probs=64.0
Q ss_pred ceeEEEecC-CCCCCCCCCCccccCCceeEeCCEEEEEEcCC----cccEEEECcc------------------cccccc
Q 043552 27 KSEVYTVGG-DEQWNTGANFDSWSQQYNYSIGDVLVFKYTEG----QHNVYEVTQA------------------TYRSCV 83 (154)
Q Consensus 27 ~a~~~~VGg-~~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~----~HsV~~V~~~------------------~y~~C~ 83 (154)
...++.||. ..++.+.+ +.+++++||+++|.+.+. .|+++..... +|.+|.
T Consensus 17 ~~~~V~v~~~~~~~~F~p------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~ 90 (139)
T 2aan_A 17 GPVTIEIGSKGEELAFDK------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD 90 (139)
T ss_dssp CCEEEEEEBCTTSSSBSC------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC
T ss_pred cCEEEEEEecCCccEEcC------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc
Confidence 445677742 23455543 468999999999888753 6999877532 455665
Q ss_pred CCCCc--ccccccCcc---eEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 84 ASSGV--IGKYESGND---QVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 84 ~~~~~--~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
..+.. ......|.+ +++.+++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 91 ~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 91 KSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 32100 012345544 445558999999999999999 999999884
No 17
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=99.02 E-value=7.7e-10 Score=76.72 Aligned_cols=90 Identities=23% Similarity=0.350 Sum_probs=60.1
Q ss_pred EEEecCCC-CCCCCCCCccccCCceeEeCCEEEEEEcCC-cccEEEECcc---ccccccCC--CCcccccccCcc-eEEc
Q 043552 30 VYTVGGDE-QWNTGANFDSWSQQYNYSIGDVLVFKYTEG-QHNVYEVTQA---TYRSCVAS--SGVIGKYESGND-QVTL 101 (154)
Q Consensus 30 ~~~VGg~~-GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~-~HsV~~V~~~---~y~~C~~~--~~~~~~~~~G~~-~v~l 101 (154)
+..+|+++ +..+.+ +..++++||+|+|.+... .|++...+.. +.+.+... ...+ ....|.+ .+++
T Consensus 2 ~v~m~~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~-~~~~G~~~~~tf 74 (99)
T 1plc_A 2 DVLLGADDGSLAFVP------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDL-LNAKGETFEVAL 74 (99)
T ss_dssp EEEESCTTCCSCEES------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCC-BCSTTCEEEEEC
T ss_pred EEEEecCCCcceEeC------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCcc-ccCCCCEEEEEE
Confidence 35566543 344433 368999999999988864 8998765321 11222110 0001 1234544 7899
Q ss_pred cCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 102 TEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 102 ~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+++|+|+|+|. .||+.||+..|+|.
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCceEEEEcC--CCcccCCEEEEEEC
Confidence 99999999999 89999999999984
No 18
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.96 E-value=2.2e-09 Score=74.60 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=60.4
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECccccc----cccCCCCc---ccccccCc-ceE
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQATYR----SCVASSGV---IGKYESGN-DQV 99 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~y~----~C~~~~~~---~~~~~~G~-~~v 99 (154)
+..+|.+ .+..+.+ +.+++++||+++|.+.. ..|++...+.++++ .|....+. ......|. ..+
T Consensus 2 ~V~~g~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~ 75 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYP------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA 75 (102)
T ss_dssp EEEESCTTCCCCEES------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE
T ss_pred EEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEE
Confidence 3567764 3454433 36899999999999775 48998765433321 12111000 01134453 377
Q ss_pred EccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 100 TLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 100 ~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+++++|+|+|+|. .||+.||+..|.|.
T Consensus 76 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 76 KVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 8899999999999 99999999999984
No 19
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.94 E-value=1.5e-09 Score=74.89 Aligned_cols=91 Identities=22% Similarity=0.248 Sum_probs=60.3
Q ss_pred eEEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcCC-cccEEEECc---cccccccCCCCcccccccCcc-eEEcc
Q 043552 29 EVYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTEG-QHNVYEVTQ---ATYRSCVASSGVIGKYESGND-QVTLT 102 (154)
Q Consensus 29 ~~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~-~HsV~~V~~---~~y~~C~~~~~~~~~~~~G~~-~v~l~ 102 (154)
.++.+|++ .++.+.+ +..++++||+|+|.+... .|++...+. ++++.+..... ......|.+ .++++
T Consensus 2 ~~V~m~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~-~~~~~pG~~~~~tf~ 74 (98)
T 2plt_A 2 ATVKLGADSGALEFVP------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRD-DYLNAPGETYSVKLT 74 (98)
T ss_dssp EEEEESCTTCCSSEES------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEE-EEECSTTCEEEEECC
T ss_pred EEEEEecCCCCceEeC------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCcccccccccc-ceecCCCCEEEEEeC
Confidence 35666654 3455543 368999999999988864 899865432 11221111100 012344544 78899
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 103 EAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 103 ~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
++|+|.|+|. .||+.||+..|.|.
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999984
No 20
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.92 E-value=2.8e-09 Score=73.45 Aligned_cols=88 Identities=25% Similarity=0.261 Sum_probs=59.3
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECccc---cccccCCCCcccccccCc-ceEEccC
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQAT---YRSCVASSGVIGKYESGN-DQVTLTE 103 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~---y~~C~~~~~~~~~~~~G~-~~v~l~~ 103 (154)
+..+|++ .++.+.+ +..++++||+|+|.+.. ..|++...+... .+.+.... .....|. ..+++++
T Consensus 4 ~V~~~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~tf~~ 74 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEP------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK---LAIAPGSFYSVTLGT 74 (97)
T ss_dssp EEEEEETTTEEEEES------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC---CCCSCSCCEEEECCS
T ss_pred EEEEeccCCccEEeC------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc---eecCCCCEEEEEeCC
Confidence 4556643 3454443 36899999999999876 389987653211 11111111 1223443 4788999
Q ss_pred CceEEEEcCCCCCCCCCCeEEEEee
Q 043552 104 AKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 104 ~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+|+|+|+|. .||+.||+..|.|.
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 99999999999984
No 21
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.91 E-value=3.3e-09 Score=73.37 Aligned_cols=90 Identities=24% Similarity=0.266 Sum_probs=59.9
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcCC-cccEEEECc---cccccccCC--CCcccccccCcc-eEEc
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTEG-QHNVYEVTQ---ATYRSCVAS--SGVIGKYESGND-QVTL 101 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~~-~HsV~~V~~---~~y~~C~~~--~~~~~~~~~G~~-~v~l 101 (154)
++.+|++ .+..+.+ +.+++++||+|+|.+... .|++...+. ++++.+... ... .....|.+ .+++
T Consensus 2 ~V~~~~~~~~~~F~P------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~-~~~~~G~~~~~~f 74 (99)
T 1byp_A 2 EVLLGSSDGGLAFVP------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEED-LLNAPGEEYSVTL 74 (99)
T ss_dssp EEEESCTTSCCSEES------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTC-CBCSTTCEEEEEE
T ss_pred EEEEecCCCcceEeC------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccc-eeeCCCCEEEEEe
Confidence 4556653 3455443 368999999999988864 899865432 122222110 000 12244544 7888
Q ss_pred cCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 102 TEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 102 ~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+++|+|.|+|. .||+.||+..|+|.
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCcEEEEEcC--CccccCCEEEEEEC
Confidence 99999999999 89999999999984
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.81 E-value=7.6e-09 Score=71.39 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=58.4
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECccc--cccccCCCCcccccccCcc-eEEccCC
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQAT--YRSCVASSGVIGKYESGND-QVTLTEA 104 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~--y~~C~~~~~~~~~~~~G~~-~v~l~~~ 104 (154)
+..+|.+ .++.+.+ +..++++||+++|.+.. ..|++...+... .+....... ......|.+ .++++++
T Consensus 4 ~V~~~~~~~~~~F~P------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~-~~~~~pG~~~~~tf~~~ 76 (98)
T 1pcs_A 4 TVKMGSDSGALVFEP------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHK-GLLFAAGESFTSTFTEP 76 (98)
T ss_dssp EEEESCTTSCSSEES------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEE-EEECSTTCEEEEECCSC
T ss_pred EEEEecCCCccEEeC------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCcccccccccc-ccccCCCCEEEEEcCCC
Confidence 4556654 3455543 36899999999999775 489986543210 000000000 012234443 7888999
Q ss_pred ceEEEEcCCCCCCCCCCeEEEEee
Q 043552 105 KKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 105 G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
|+|+|+|. .||..||+..|.|.
T Consensus 77 G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 77 GTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEEEECG--GGTTTTCEEEEEEC
T ss_pred eEEEEEcC--CccccCCeEEEEEC
Confidence 99999999 89999999999984
No 23
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.56 E-value=1.1e-07 Score=69.40 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=52.2
Q ss_pred CCceeEeCCEEEEEEcCCcccEEEECccccccccCCCCcccccccCc-ceEEccCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 50 QQYNYSIGDVLVFKYTEGQHNVYEVTQATYRSCVASSGVIGKYESGN-DQVTLTEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~~G~-~~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+..++++||+|+|.+....|+|+..+ .+.+..........|. .+++++++|.|.|+|+. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 36899999999999987789986543 1222111000112333 37889999999999996 888 99999998
Q ss_pred CCCC
Q 043552 129 ENPT 132 (154)
Q Consensus 129 ~~~~ 132 (154)
+.+.
T Consensus 92 ~~p~ 95 (122)
T 2ux6_A 92 DAPA 95 (122)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 7443
No 24
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.55 E-value=2.1e-07 Score=68.53 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=48.3
Q ss_pred CCceeEeCCEEEEEEcCC-cccEEEECccccccccCCCCcccccccCcc-eEEccCCceEEEEcCCCCCCCCCCeEEEEe
Q 043552 50 QQYNYSIGDVLVFKYTEG-QHNVYEVTQATYRSCVASSGVIGKYESGND-QVTLTEAKKYWFICNVAGHCLGGMRFSIDV 127 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~-~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~-~v~l~~~G~~YFic~v~~HC~~GmKl~I~V 127 (154)
+..++++||+|+|.+... .|++...+... ..-.... .....|.+ .++++++|+|.|+|+. |. ||+..|.|
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~-g~~~~~s---~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG---EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC---CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCC-Ccccccc---cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 478999999999997754 79986543210 0000000 11234443 6888999999999996 76 99999998
Q ss_pred e
Q 043552 128 K 128 (154)
Q Consensus 128 ~ 128 (154)
.
T Consensus 132 ~ 132 (132)
T 3c75_A 132 E 132 (132)
T ss_dssp C
T ss_pred C
Confidence 4
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.43 E-value=1.6e-07 Score=65.30 Aligned_cols=67 Identities=24% Similarity=0.257 Sum_probs=46.8
Q ss_pred CCceeEeCCEEEEEEcCC---cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCCCCeE
Q 043552 50 QQYNYSIGDVLVFKYTEG---QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLGGMRF 123 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~---~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~GmKl 123 (154)
+.+++++||++.|.+.+. .|++.. ...+. -.....|.. .++.+++|.|.|+|. .||..||+.
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~-~~~~~---------~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G 95 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTI-KKLGI---------DVVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEG 95 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEE-GGGTE---------EEEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEE-ecCCc---------ceeecCCcceeEEEecccCceEEEECc--cccCCCCEE
Confidence 378999999999987642 466632 21111 012233433 466789999999997 699999999
Q ss_pred EEEee
Q 043552 124 SIDVK 128 (154)
Q Consensus 124 ~I~V~ 128 (154)
.|.|+
T Consensus 96 ~i~Ve 100 (100)
T 4hci_A 96 KVIVK 100 (100)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99984
No 26
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.38 E-value=1.6e-06 Score=59.85 Aligned_cols=89 Identities=18% Similarity=0.255 Sum_probs=57.0
Q ss_pred EEEecCC-CCCCCCCCCccccCCceeEeCCEEEEEEcC-CcccEEEECccccccccCC---CC---cccccccCcc-eEE
Q 043552 30 VYTVGGD-EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-GQHNVYEVTQATYRSCVAS---SG---VIGKYESGND-QVT 100 (154)
Q Consensus 30 ~~~VGg~-~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-~~HsV~~V~~~~y~~C~~~---~~---~~~~~~~G~~-~v~ 100 (154)
++.+|.+ .+..+.+ ...+++.||+|+|.+.. ..|++..-.. . ..+... .+ .......|.+ .++
T Consensus 4 ~V~~~~~~~~~~f~p------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~-~-~~~~~g~~~~~~~~~~~~i~pG~~~~~~ 75 (105)
T 3cvb_A 4 TVKMGADSGLFQFEP------ANVTVHPGDTVKWVNNKLPPHNILFDDK-Q-VPGASKELADKLSHSQLMFSPGESYEIT 75 (105)
T ss_dssp EEEESCTTCCSCEES------SEEEECTTEEEEEEECSSCCEEEEECTT-S-SGGGCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEeecCCccEEeC------CEEEEcCCCEEEEEECCCCCCeEEEeCC-C-CCcccccccccccccccccCCCCeEEEE
Confidence 4566653 4455433 36899999999998764 4799865321 1 122100 00 0011234443 566
Q ss_pred c---cCCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 101 L---TEAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 101 l---~~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+ +++|+|+|.|. .|+..||+..|.|.
T Consensus 76 f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 76 FSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp ECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 6 78999999999 79999999999986
No 27
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.32 E-value=4.4e-06 Score=61.63 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=58.3
Q ss_pred EEEecCCCCCCCCCCCccccCCceeEeC-CEEEEEEcC-C-------cccEEEECccc----------------cccccC
Q 043552 30 VYTVGGDEQWNTGANFDSWSQQYNYSIG-DVLVFKYTE-G-------QHNVYEVTQAT----------------YRSCVA 84 (154)
Q Consensus 30 ~~~VGg~~GW~~~~~Y~~Was~~~f~vG-DtLvF~y~~-~-------~HsV~~V~~~~----------------y~~C~~ 84 (154)
++.|+.++...+.+ +..+++.| |++.|.+.+ + .|+++..+..+ |..=+.
T Consensus 4 ~v~i~~~d~m~F~p------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~ 77 (129)
T 1cuo_A 4 ETTVTSGDTMTYST------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGD 77 (129)
T ss_dssp EEEEEECSSSCCSC------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTC
T ss_pred EEEEEeCCCceEcc------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccc
Confidence 44555545555554 37899999 977776653 2 39987765432 211010
Q ss_pred CCCcc---cccccCcc---eEEcc---CCceEEEEcCCCCCCCCCCeEEEEeeC
Q 043552 85 SSGVI---GKYESGND---QVTLT---EAKKYWFICNVAGHCLGGMRFSIDVKE 129 (154)
Q Consensus 85 ~~~~~---~~~~~G~~---~v~l~---~~G~~YFic~v~~HC~~GmKl~I~V~~ 129 (154)
.+ .+ .....|.+ +++.+ ++|+|+|+|+.++|=+ ||+..|+|.+
T Consensus 78 ~~-~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 78 KR-VIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp TT-CSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred cc-ceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 10 11 12345544 44544 8999999999999999 9999999863
No 28
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.27 E-value=2.6e-06 Score=65.72 Aligned_cols=93 Identities=15% Similarity=0.212 Sum_probs=59.4
Q ss_pred eEEEecCCCCCCCCCCCccccCCcee-EeCCEEEEEEcC--C------cccEEEECccccc---------------cccC
Q 043552 29 EVYTVGGDEQWNTGANFDSWSQQYNY-SIGDVLVFKYTE--G------QHNVYEVTQATYR---------------SCVA 84 (154)
Q Consensus 29 ~~~~VGg~~GW~~~~~Y~~Was~~~f-~vGDtLvF~y~~--~------~HsV~~V~~~~y~---------------~C~~ 84 (154)
.++.|+.+++..+.+ +.+++ +.||++.|.+.+ . .|+++..+..+++ .=+.
T Consensus 43 ~~V~I~~~d~m~F~P------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d 116 (167)
T 3ay2_A 43 CAATVESNDNMQFNT------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDD 116 (167)
T ss_dssp CEEEEEECTTSCBSC------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTC
T ss_pred eEEEEEeCCCceEec------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccc
Confidence 457777665666654 36788 889976666653 2 2998776543221 1010
Q ss_pred CCCcc---cccccCcc-eEEcc----CCceEEEEcCCCCCCCCCCeEEEEeeC
Q 043552 85 SSGVI---GKYESGND-QVTLT----EAKKYWFICNVAGHCLGGMRFSIDVKE 129 (154)
Q Consensus 85 ~~~~~---~~~~~G~~-~v~l~----~~G~~YFic~v~~HC~~GmKl~I~V~~ 129 (154)
.+ .+ .....|.+ .++++ ++|.|+|+|+.++|=+ |||..|+|.+
T Consensus 117 ~~-vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 117 AR-VVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp TT-EEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred cc-hhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 10 11 12344544 55554 7999999999999988 9999999963
No 29
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.21 E-value=4.1e-06 Score=58.99 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=48.1
Q ss_pred CCceeEeCCEEEEEEcCC-cccEEEECccccccccCCCCcc-cccccCcc-eEEccCCceEEEEcCCCCCCCCCCeEEEE
Q 043552 50 QQYNYSIGDVLVFKYTEG-QHNVYEVTQATYRSCVASSGVI-GKYESGND-QVTLTEAKKYWFICNVAGHCLGGMRFSID 126 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~-~HsV~~V~~~~y~~C~~~~~~~-~~~~~G~~-~v~l~~~G~~YFic~v~~HC~~GmKl~I~ 126 (154)
+..++++||+|.|..... .|++...+... ...... .....|.+ .++++++|.|.|+|+. |. ||+..|.
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-----~~~~~~s~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~I~ 104 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIV-----GEDAFRGEMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKVI 104 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTS-----SSSCEECCCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCC-----CcccccccccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEEEE
Confidence 378999999999997754 79985432210 000000 11234433 7888999999999996 87 9999999
Q ss_pred ee
Q 043552 127 VK 128 (154)
Q Consensus 127 V~ 128 (154)
|.
T Consensus 105 V~ 106 (106)
T 1id2_A 105 VE 106 (106)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 30
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.19 E-value=3.9e-06 Score=58.85 Aligned_cols=67 Identities=25% Similarity=0.337 Sum_probs=47.5
Q ss_pred CCceeEeCCEEEEEEcCC-cccEEEECccc----cccccCCCCcccccccCcc-eEEccCCceEEEEcCCCCCCCCCCeE
Q 043552 50 QQYNYSIGDVLVFKYTEG-QHNVYEVTQAT----YRSCVASSGVIGKYESGND-QVTLTEAKKYWFICNVAGHCLGGMRF 123 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~-~HsV~~V~~~~----y~~C~~~~~~~~~~~~G~~-~v~l~~~G~~YFic~v~~HC~~GmKl 123 (154)
+..++++||+|+|.+... .|+|...+..+ ++. .....|.+ .++++++|+|+|+|.. |- ||+.
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~--------~~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G 100 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKG--------PMMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRG 100 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC--------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccc--------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEE
Confidence 368999999999987754 79986532110 111 11234433 6788999999999996 54 9999
Q ss_pred EEEee
Q 043552 124 SIDVK 128 (154)
Q Consensus 124 ~I~V~ 128 (154)
.|.|.
T Consensus 101 ~i~V~ 105 (105)
T 2ov0_A 101 KVVVE 105 (105)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99884
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.09 E-value=2e-05 Score=58.07 Aligned_cols=90 Identities=19% Similarity=0.324 Sum_probs=55.1
Q ss_pred EEecCCCCCCCCCCCccccCCcee-EeCCEEEEEEcCC--------cccEEEECccc----------------cccccCC
Q 043552 31 YTVGGDEQWNTGANFDSWSQQYNY-SIGDVLVFKYTEG--------QHNVYEVTQAT----------------YRSCVAS 85 (154)
Q Consensus 31 ~~VGg~~GW~~~~~Y~~Was~~~f-~vGDtLvF~y~~~--------~HsV~~V~~~~----------------y~~C~~~ 85 (154)
+.|+.+++..+.+ +..++ +.||++.|.+.+. .|+++..+.++ |..=+..
T Consensus 4 v~v~~~d~m~F~p------~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~ 77 (128)
T 2iaa_C 4 VSIEGNDSMQFNT------KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE 77 (128)
T ss_dssp EEEEECTTSCBSC------SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT
T ss_pred EEEEeCCCceEec------CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc
Confidence 4455555566654 35677 7799777666532 29987764332 2110111
Q ss_pred CCcc---cccccCcc-eEEc--c--CCc-eEEEEcCCCCCCCCCCeEEEEee
Q 043552 86 SGVI---GKYESGND-QVTL--T--EAK-KYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 86 ~~~~---~~~~~G~~-~v~l--~--~~G-~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
+ .+ .....|.+ .+++ . ++| +|.|+|++++|=+ |||..|+|.
T Consensus 78 ~-~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 78 R-VIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp T-EEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred h-hhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 0 11 12345544 4454 4 678 5999999999999 999999986
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.07 E-value=7.8e-06 Score=60.23 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=56.3
Q ss_pred EEEecCCCCCCCCCCCccccCCcee-EeCCEEEEEEcCC--------cccEEEECccccc----------------cccC
Q 043552 30 VYTVGGDEQWNTGANFDSWSQQYNY-SIGDVLVFKYTEG--------QHNVYEVTQATYR----------------SCVA 84 (154)
Q Consensus 30 ~~~VGg~~GW~~~~~Y~~Was~~~f-~vGDtLvF~y~~~--------~HsV~~V~~~~y~----------------~C~~ 84 (154)
++.|+.+++..+.+ +..++ +.||++.|.+.+. .|+++..+.++.+ .=+.
T Consensus 4 ~v~v~~~d~m~F~p------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 77 (128)
T 1nwp_A 4 KVTVDSTDQMSFNT------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGD 77 (128)
T ss_dssp EEEEEECTTSCBSC------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTC
T ss_pred EEEEEeCCCccEec------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccccccc
Confidence 45566555666654 36788 8999877776532 2998776433221 0000
Q ss_pred CCCcc---cccccCcc-eEEc--c--CCce-EEEEcCCCCCCCCCCeEEEEee
Q 043552 85 SSGVI---GKYESGND-QVTL--T--EAKK-YWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 85 ~~~~~---~~~~~G~~-~v~l--~--~~G~-~YFic~v~~HC~~GmKl~I~V~ 128 (154)
.+ .+ .....|.+ .+++ + ++|. |.|+|++++|=+ |||..|+|.
T Consensus 78 ~~-~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 78 AR-VIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TT-EEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ch-hheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 00 11 12345544 4444 4 5676 999999999999 999999984
No 33
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.05 E-value=2.1e-05 Score=57.96 Aligned_cols=91 Identities=18% Similarity=0.268 Sum_probs=54.9
Q ss_pred EEEecCCCCCCCCCCCccccCCcee-EeCCEEEEEEcCC--------cccEEEECccc----------------cccccC
Q 043552 30 VYTVGGDEQWNTGANFDSWSQQYNY-SIGDVLVFKYTEG--------QHNVYEVTQAT----------------YRSCVA 84 (154)
Q Consensus 30 ~~~VGg~~GW~~~~~Y~~Was~~~f-~vGDtLvF~y~~~--------~HsV~~V~~~~----------------y~~C~~ 84 (154)
++.|+.+++..+.+ +..++ +.||++.|.+.+. .|+++..+..+ |..=+.
T Consensus 4 ~v~v~~~d~m~F~p------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (129)
T 2ccw_A 4 EATVESNDAMQYNV------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGD 77 (129)
T ss_dssp EEEEEECTTSCBSC------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTC
T ss_pred EEEEEeCCCccEec------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccc
Confidence 45566555566554 35667 7799766666532 39988765432 211011
Q ss_pred CCCcc---cccccCcc-eE--Ecc--CCce-EEEEcCCCCCCCCCCeEEEEee
Q 043552 85 SSGVI---GKYESGND-QV--TLT--EAKK-YWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 85 ~~~~~---~~~~~G~~-~v--~l~--~~G~-~YFic~v~~HC~~GmKl~I~V~ 128 (154)
.+ .+ .....|.+ .+ +.+ ++|. |+|+|+.++|=+ |||..|+|.
T Consensus 78 ~~-~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 78 TR-VIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TT-EEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cc-ceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 10 11 12345544 44 444 5655 999999999998 999999986
No 34
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.47 E-value=8.6e-05 Score=57.85 Aligned_cols=82 Identities=18% Similarity=0.307 Sum_probs=52.0
Q ss_pred eeEeCCEEEEE---EcC------CcccEEEECccccccccCCCC--cccccc--cCcceEEcc-------------CCc-
Q 043552 53 NYSIGDVLVFK---YTE------GQHNVYEVTQATYRSCVASSG--VIGKYE--SGNDQVTLT-------------EAK- 105 (154)
Q Consensus 53 ~f~vGDtLvF~---y~~------~~HsV~~V~~~~y~~C~~~~~--~~~~~~--~G~~~v~l~-------------~~G- 105 (154)
..++||.|-+- |.. ..+.+++|++++|+.|+.... .+..-+ .+...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34679999875 322 137899999999999987631 111111 223333332 244
Q ss_pred eEEEEcCCC-----------CCCCC-CCeEEEEeeCCCCCc
Q 043552 106 KYWFICNVA-----------GHCLG-GMRFSIDVKENPTLI 134 (154)
Q Consensus 106 ~~YFic~v~-----------~HC~~-GmKl~I~V~~~~~~~ 134 (154)
+|||||+-. +.|.. +|||.|.|...++..
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~~ 145 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSA 145 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC----
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCCCC
Confidence 799998853 68996 999999998765553
No 35
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.38 E-value=0.00036 Score=54.30 Aligned_cols=80 Identities=18% Similarity=0.377 Sum_probs=49.5
Q ss_pred CceeEeCCEEEEE---EcC-------CcccEEEECccccccccCCCCccccc-------ccCcceEEcc-----------
Q 043552 51 QYNYSIGDVLVFK---YTE-------GQHNVYEVTQATYRSCVASSGVIGKY-------ESGNDQVTLT----------- 102 (154)
Q Consensus 51 ~~~f~vGDtLvF~---y~~-------~~HsV~~V~~~~y~~C~~~~~~~~~~-------~~G~~~v~l~----------- 102 (154)
.+.+++||.|-+- |+. ....+++|++++|+.|+..+.....+ ..|+.++++.
T Consensus 51 ~i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~ 130 (177)
T 2x11_B 51 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 130 (177)
T ss_dssp EEEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCc
Confidence 3568899999775 331 24567899999999998753211111 1134433321
Q ss_pred --CCc-eEEEEcCCC-----CCCCCCCeEEEEeeCCCCC
Q 043552 103 --EAK-KYWFICNVA-----GHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 103 --~~G-~~YFic~v~-----~HC~~GmKl~I~V~~~~~~ 133 (154)
++| .||||++-. +-| |||.|.|...+..
T Consensus 131 EF~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~~ 166 (177)
T 2x11_B 131 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNSC 166 (177)
T ss_dssp CCCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTTC
T ss_pred cccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCCC
Confidence 344 578886522 235 9999999877654
No 36
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.36 E-value=0.00057 Score=47.80 Aligned_cols=68 Identities=15% Similarity=0.162 Sum_probs=45.3
Q ss_pred CCceeEeCCEEEEEEcCC---cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCC-CCe
Q 043552 50 QQYNYSIGDVLVFKYTEG---QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLG-GMR 122 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~---~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~-GmK 122 (154)
+..+++.||+++|.+.+. .|++.. ...+ .......|.+ .++.+++|.|+|.|.. ||.. +|+
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i-~~~~---------~~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~ 105 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSI-DAFG---------VQEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLP 105 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEE-GGGT---------EEEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCC
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEE-cCCC---------ceeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCE
Confidence 368999999999987643 577632 2211 1112234443 3445899999999995 7853 499
Q ss_pred EEEEeeC
Q 043552 123 FSIDVKE 129 (154)
Q Consensus 123 l~I~V~~ 129 (154)
..|.|.+
T Consensus 106 g~i~V~~ 112 (112)
T 1iby_A 106 GTLNVVE 112 (112)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999863
No 37
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.28 E-value=0.0014 Score=48.28 Aligned_cols=68 Identities=26% Similarity=0.291 Sum_probs=46.8
Q ss_pred CCceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCc---ceEEccCCceEEEEcCCCCCCC---CCC
Q 043552 50 QQYNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGN---DQVTLTEAKKYWFICNVAGHCL---GGM 121 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~---~~v~l~~~G~~YFic~v~~HC~---~Gm 121 (154)
+..++.+||++.|..++. .|+... .+.+. ......|. ..++.+++|.|+|.|+. +|. .+|
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~i-p~~~~---------k~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M 127 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTNI---------NVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNM 127 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEE-TTSSC---------EEEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTC
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEe-cCCCc---------eeEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCC
Confidence 368999999999998753 566532 21111 01123342 36888999999999985 555 699
Q ss_pred eEEEEeeC
Q 043552 122 RFSIDVKE 129 (154)
Q Consensus 122 Kl~I~V~~ 129 (154)
++.|.|.+
T Consensus 128 ~g~v~V~~ 135 (135)
T 2cua_A 128 FGTIVVKE 135 (135)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999863
No 38
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=96.91 E-value=0.002 Score=50.31 Aligned_cols=79 Identities=20% Similarity=0.430 Sum_probs=46.7
Q ss_pred CceeEeCCEEEEE---EcCC--------cccEEEECccccccccCCCCcccc------cc-cCcceEE------------
Q 043552 51 QYNYSIGDVLVFK---YTEG--------QHNVYEVTQATYRSCVASSGVIGK------YE-SGNDQVT------------ 100 (154)
Q Consensus 51 ~~~f~vGDtLvF~---y~~~--------~HsV~~V~~~~y~~C~~~~~~~~~------~~-~G~~~v~------------ 100 (154)
.+.+++||.|-+- |..+ ...+++|++++|+.|+........ .. .|..+++
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 4668899999775 3321 356789999999999875311111 11 1333332
Q ss_pred --ccCCceEEEEcC----CCCCCCCCCeEEEEeeCCCC
Q 043552 101 --LTEAKKYWFICN----VAGHCLGGMRFSIDVKENPT 132 (154)
Q Consensus 101 --l~~~G~~YFic~----v~~HC~~GmKl~I~V~~~~~ 132 (154)
....-.||||++ .++.| ||+.|.|.....
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 223345888876 33456 899999975543
No 39
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.78 E-value=0.015 Score=42.72 Aligned_cols=88 Identities=23% Similarity=0.381 Sum_probs=50.8
Q ss_pred EEecCCCCCCCCCCCccccCCceeEe-CCEEEEEEcC-C-------cccEEEECccccccc-----------c---CCC-
Q 043552 31 YTVGGDEQWNTGANFDSWSQQYNYSI-GDVLVFKYTE-G-------QHNVYEVTQATYRSC-----------V---ASS- 86 (154)
Q Consensus 31 ~~VGg~~GW~~~~~Y~~Was~~~f~v-GDtLvF~y~~-~-------~HsV~~V~~~~y~~C-----------~---~~~- 86 (154)
+.|-.+++..+.+ +.+++.. |+++.|.+.+ + .||++..+.++-+.= + ..+
T Consensus 5 v~i~~~d~M~F~p------~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~ 78 (125)
T 3fsa_A 5 VDIQGNDQMQFNT------NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDS 78 (125)
T ss_dssp EEEEBCTTSCBSC------SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCT
T ss_pred EEEEccCCcEEec------CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCc
Confidence 3444444555543 3567765 9999888874 3 399988743211100 0 001
Q ss_pred Cccc---ccccCcc-eEEc--c---CCceEEEEcCCCCCCCCCCeEEEEee
Q 043552 87 GVIG---KYESGND-QVTL--T---EAKKYWFICNVAGHCLGGMRFSIDVK 128 (154)
Q Consensus 87 ~~~~---~~~~G~~-~v~l--~---~~G~~YFic~v~~HC~~GmKl~I~V~ 128 (154)
..+. ....|.+ .+++ . ++|.|-|+|+ +|= ||+..|.|.
T Consensus 79 ~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 79 RVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 1121 2345554 4444 4 6799999999 887 999999884
No 40
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.52 E-value=0.0073 Score=45.13 Aligned_cols=78 Identities=18% Similarity=0.390 Sum_probs=47.9
Q ss_pred CceeEeCCEEEEE---EcC-------CcccEEEECccccccccCCCCccccc------c-cCcceEEcc-----------
Q 043552 51 QYNYSIGDVLVFK---YTE-------GQHNVYEVTQATYRSCVASSGVIGKY------E-SGNDQVTLT----------- 102 (154)
Q Consensus 51 ~~~f~vGDtLvF~---y~~-------~~HsV~~V~~~~y~~C~~~~~~~~~~------~-~G~~~v~l~----------- 102 (154)
.+.+++||.|-+- |.. ....+.+|++++|+.|+........+ . .|+.++++.
T Consensus 22 ~i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~ 101 (138)
T 1shx_A 22 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 101 (138)
T ss_dssp EEEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCce
Confidence 3567899999775 331 24567899999999998753211111 1 134433321
Q ss_pred --CCc-eEEEEcCC-----CCCCCCCCeEEEEeeCCC
Q 043552 103 --EAK-KYWFICNV-----AGHCLGGMRFSIDVKENP 131 (154)
Q Consensus 103 --~~G-~~YFic~v-----~~HC~~GmKl~I~V~~~~ 131 (154)
++| .||||++- ++-| |||.|.|.+..
T Consensus 102 EF~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 102 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred eecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 244 47888652 2346 99999998764
No 41
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=96.43 E-value=0.0052 Score=52.30 Aligned_cols=76 Identities=20% Similarity=0.310 Sum_probs=53.3
Q ss_pred cCCceeEeCCEEEEEEcCC---cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCCCCe
Q 043552 49 SQQYNYSIGDVLVFKYTEG---QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLGGMR 122 (154)
Q Consensus 49 as~~~f~vGDtLvF~y~~~---~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~GmK 122 (154)
...++++.||+|+|++.+. .|++..-.......|.. ..|.. .++++++|+++|.|...+|=..||+
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i--------~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~ 125 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVN--------GKNASSTFSFVASKVGEFNYYCSIAGHRQAGME 125 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBC--------STTBEEEEEEECCSCEEEEEECCSTTHHHHTCE
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceec--------CCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCE
Confidence 3468999999999988753 37764312222223332 22332 5677889999999999899888999
Q ss_pred EEEEeeCCCC
Q 043552 123 FSIDVKENPT 132 (154)
Q Consensus 123 l~I~V~~~~~ 132 (154)
..|.|....+
T Consensus 126 G~i~V~~~~~ 135 (447)
T 2dv6_A 126 GNIQVLPGNR 135 (447)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEeCCcc
Confidence 9999987654
No 42
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.36 E-value=0.019 Score=43.91 Aligned_cols=68 Identities=26% Similarity=0.293 Sum_probs=44.8
Q ss_pred CCceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCc---ceEEccCCceEEEEcCCCCCCCC---CC
Q 043552 50 QQYNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGN---DQVTLTEAKKYWFICNVAGHCLG---GM 121 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~---~~v~l~~~G~~YFic~v~~HC~~---Gm 121 (154)
+...+.+|+.++|..++. .|+... ..-+ ......+|. ..++.+++|.||+.|+. .|.. +|
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I-P~lg---------ik~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M 160 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTN---------INVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNM 160 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE-TTSS---------CEEEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGC
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE-CCCC---------eEEEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCC
Confidence 457888999999987753 455422 1111 111112343 36788999999999994 5664 69
Q ss_pred eEEEEeeC
Q 043552 122 RFSIDVKE 129 (154)
Q Consensus 122 Kl~I~V~~ 129 (154)
+..|.|.+
T Consensus 161 ~g~V~V~e 168 (168)
T 3s8f_B 161 FGTIVVKE 168 (168)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999863
No 43
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.06 E-value=0.015 Score=52.77 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=47.3
Q ss_pred CCceeEeCCEEEEEEcCC------cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCCC
Q 043552 50 QQYNYSIGDVLVFKYTEG------QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLGG 120 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~------~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~G 120 (154)
+..++.+||++.|..++. .|+... .. + +.......|.. .++.+++|.|||+|+. .|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~I-Ps--l-------GIK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~ 625 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVV-VN--H-------GVSMEISPQQTSSITFVADKPGLHWYYCSW--FCHAL 625 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEE-TT--T-------TEEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTT
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEe-cC--C-------CceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCC
Confidence 368899999999987762 577532 11 1 11112234433 6788999999999995 77765
Q ss_pred ---CeEEEEeeC
Q 043552 121 ---MRFSIDVKE 129 (154)
Q Consensus 121 ---mKl~I~V~~ 129 (154)
|+..|.|.+
T Consensus 626 Hs~M~G~ViVEP 637 (638)
T 3sbq_A 626 HMEMVGRMMVEP 637 (638)
T ss_dssp CTTCEEEEEEEC
T ss_pred cccceEEEEEec
Confidence 999999975
No 44
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.84 E-value=0.021 Score=51.55 Aligned_cols=69 Identities=19% Similarity=0.226 Sum_probs=46.9
Q ss_pred CCceeEeCCEEEEEEcCC------cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCC---CCCC
Q 043552 50 QQYNYSIGDVLVFKYTEG------QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNV---AGHC 117 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~------~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v---~~HC 117 (154)
...+++.||+++|...+. .|++.. ...+ .......|.+ .++.+++|.|||.|.. ..|
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~i-p~~g---------v~~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H- 581 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTM-GNYG---------VAMEIGPQMTSSVTFVAANPGVYWYYCQWFCHALH- 581 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEE-TTTT---------EEEEECTTCEEEEEEECCSCEEEEEECCSCCSTTC-
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEe-cCCC---------cceeeCCCCeEEEEEECCCCEEEEEECCCCCCCCc-
Confidence 367899999999997752 466632 2111 1112233433 6788999999999983 245
Q ss_pred CCCCeEEEEeeCC
Q 043552 118 LGGMRFSIDVKEN 130 (154)
Q Consensus 118 ~~GmKl~I~V~~~ 130 (154)
.||+..|.|.+.
T Consensus 582 -~gM~G~IiV~p~ 593 (595)
T 1fwx_A 582 -MEMRGRMLVEPK 593 (595)
T ss_dssp -TTCEEEEEEECC
T ss_pred -cCCEEEEEEEcC
Confidence 499999999864
No 45
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=94.81 E-value=0.039 Score=41.27 Aligned_cols=77 Identities=23% Similarity=0.295 Sum_probs=48.2
Q ss_pred ceeEeCCEEEEEE---cC---------CcccEEEECccccccccCCCCccccc----ccCcceE--------------Ec
Q 043552 52 YNYSIGDVLVFKY---TE---------GQHNVYEVTQATYRSCVASSGVIGKY----ESGNDQV--------------TL 101 (154)
Q Consensus 52 ~~f~vGDtLvF~y---~~---------~~HsV~~V~~~~y~~C~~~~~~~~~~----~~G~~~v--------------~l 101 (154)
..+++||.|-+-= .. ....+.+|++++|+.|+........+ -.++.++ ..
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 4578899997753 22 23468889999999998752111111 1122222 22
Q ss_pred cCCceEEEEcCCC-----------CCCCC-CCeEEEEee
Q 043552 102 TEAKKYWFICNVA-----------GHCLG-GMRFSIDVK 128 (154)
Q Consensus 102 ~~~G~~YFic~v~-----------~HC~~-GmKl~I~V~ 128 (154)
...-.||||++-. |-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 2335688887733 46885 899999985
No 46
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=94.55 E-value=0.071 Score=39.74 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=47.6
Q ss_pred eeEeCCEEEEEEcCC---------cccEEEECccccccccCCCCccccc----ccCcceEEcc-------------CCc-
Q 043552 53 NYSIGDVLVFKYTEG---------QHNVYEVTQATYRSCVASSGVIGKY----ESGNDQVTLT-------------EAK- 105 (154)
Q Consensus 53 ~f~vGDtLvF~y~~~---------~HsV~~V~~~~y~~C~~~~~~~~~~----~~G~~~v~l~-------------~~G- 105 (154)
..++||.|-+-=+.. ...++.|++++|+.|+......... -.++..+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 456799998753321 4678899999999998763211111 1233333222 344
Q ss_pred eEEEEcCCC-----------CCCCC-CCeEEEEeeC
Q 043552 106 KYWFICNVA-----------GHCLG-GMRFSIDVKE 129 (154)
Q Consensus 106 ~~YFic~v~-----------~HC~~-GmKl~I~V~~ 129 (154)
+||||++-. |-|.. .|||.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 577887632 37885 8999999863
No 47
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=93.51 E-value=0.14 Score=38.94 Aligned_cols=80 Identities=19% Similarity=0.353 Sum_probs=46.7
Q ss_pred CceeEeCCEEEEE---EcC--------CcccEEEECccccccccCCCCccccc------c-cCcceEE------------
Q 043552 51 QYNYSIGDVLVFK---YTE--------GQHNVYEVTQATYRSCVASSGVIGKY------E-SGNDQVT------------ 100 (154)
Q Consensus 51 ~~~f~vGDtLvF~---y~~--------~~HsV~~V~~~~y~~C~~~~~~~~~~------~-~G~~~v~------------ 100 (154)
.+.+++||.|-+- |.. ....+++|++++|+.|+........+ . .|..+++
T Consensus 31 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G 110 (157)
T 2wo3_B 31 TVEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLG 110 (157)
T ss_dssp EEEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTS
T ss_pred EEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCC
Confidence 3567889999775 321 12347899999999998753111111 1 1233332
Q ss_pred --ccCCceEEEEcCCC-----CCCCCCCeEEEEeeCCCCC
Q 043552 101 --LTEAKKYWFICNVA-----GHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 101 --l~~~G~~YFic~v~-----~HC~~GmKl~I~V~~~~~~ 133 (154)
....-.||||++-. +-| |||.|.|......
T Consensus 111 ~EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~~~ 147 (157)
T 2wo3_B 111 FEFRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQET 147 (157)
T ss_dssp CCCCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC--
T ss_pred eeeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCCCC
Confidence 22234588888632 346 5888888776553
No 48
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=91.53 E-value=0.71 Score=37.66 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=49.5
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCC----CCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAG----HCL 118 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~----HC~ 118 (154)
.++++.||+|++++.+. .|++..=.....+ . .+.......|.+ .++++.+|++||-|...+ |=.
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~--~--~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 141 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL--G--GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVV 141 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G--GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCC--C--CcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHh
Confidence 57899999999888763 4665331111000 0 011112345544 567789999999999754 456
Q ss_pred CCCeEEEEeeCCC
Q 043552 119 GGMRFSIDVKENP 131 (154)
Q Consensus 119 ~GmKl~I~V~~~~ 131 (154)
.||...+.|....
T Consensus 142 ~Gl~G~liV~~~~ 154 (336)
T 1oe1_A 142 SGMSGTLMVLPRD 154 (336)
T ss_dssp TTCEEEEEEECTT
T ss_pred CCCeEEEEEecCc
Confidence 8999999998654
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=90.98 E-value=0.75 Score=37.51 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=50.0
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCC-----CC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAG-----HC 117 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~-----HC 117 (154)
.++++.||+|++++.+. .|.+..-...+.+.- +.+.....|.+ .++++.+|++||-|...+ |=
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~----~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~ 140 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG----GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHV 140 (333)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG----GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHH
T ss_pred cEEecCCCEEEEEEEECCCCcccccceecCCCCCCCC----CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhh
Confidence 57899999999988764 355532111111100 01112344544 577789999999999764 66
Q ss_pred CCCCeEEEEeeCCC
Q 043552 118 LGGMRFSIDVKENP 131 (154)
Q Consensus 118 ~~GmKl~I~V~~~~ 131 (154)
..||...+.|.+..
T Consensus 141 ~~Gl~G~~iV~~~~ 154 (333)
T 1mzy_A 141 VSGMAGCIMVLPRD 154 (333)
T ss_dssp HTTCEEEEEEECTT
T ss_pred hCCCEEEEEEccCc
Confidence 78999999998544
No 50
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=90.45 E-value=0.26 Score=40.34 Aligned_cols=49 Identities=12% Similarity=0.006 Sum_probs=36.9
Q ss_pred eEEccCCceEEEEcCCCCCC-CCCCeEEEEeeCCCCCcc-ccccCCCCccc
Q 043552 98 QVTLTEAKKYWFICNVAGHC-LGGMRFSIDVKENPTLIQ-QQLQHQPHHQK 146 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC-~~GmKl~I~V~~~~~~~~-~~~~~~~~~~~ 146 (154)
.++.+.+|.++|.|....|+ ..||...+.|.....+.- ++..++.|-||
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~~ 336 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIPR 336 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCCC
Confidence 56778899999999988888 899999999987765543 33444444443
No 51
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=90.10 E-value=1 Score=36.11 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=48.9
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--CccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCC---CCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVA---GHCLG 119 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~---~HC~~ 119 (154)
.++++.||+|+.++.+. .|++..= .....|.= ..........|.+ .++.+.+|++||-|-.. .|=..
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~--p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 144 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGT--PGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAK 144 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCC--TTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCC--CCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhC
Confidence 57899999999988754 3444221 11111100 0000011234444 57778999999999976 35678
Q ss_pred CCeEEEEeeCCCC
Q 043552 120 GMRFSIDVKENPT 132 (154)
Q Consensus 120 GmKl~I~V~~~~~ 132 (154)
||...+.|.+...
T Consensus 145 Gl~G~liV~~~~~ 157 (288)
T 3gdc_A 145 GLYGGFIVEPKEG 157 (288)
T ss_dssp TCEEEEEEECSSC
T ss_pred cCeEEEEEeCCcc
Confidence 9999999986543
No 52
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=89.42 E-value=0.63 Score=38.08 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=47.8
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCC---CCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVA---GHCLG 119 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~---~HC~~ 119 (154)
.++++.||++++++.+. .|++..=.....+. .. .......|.. .++.+.+|++||-|... .|-..
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG--~~--~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~ 146 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG--GA--AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIAN 146 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GT--TTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC--CC--cceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhc
Confidence 57899999999987754 35543210001110 00 0111344544 56778899999999853 35568
Q ss_pred CCeEEEEeeCCC
Q 043552 120 GMRFSIDVKENP 131 (154)
Q Consensus 120 GmKl~I~V~~~~ 131 (154)
||...|.|....
T Consensus 147 Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 147 GMYGLILVEPKE 158 (327)
T ss_dssp TCEEEEEEECTT
T ss_pred ceEEEEEEecCC
Confidence 999999998653
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=85.15 E-value=0.86 Score=38.50 Aligned_cols=77 Identities=19% Similarity=0.209 Sum_probs=48.4
Q ss_pred CCceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCc-ccccccCcc---eEEccCCceEEEEcC---CCCCC
Q 043552 50 QQYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGV-IGKYESGND---QVTLTEAKKYWFICN---VAGHC 117 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~-~~~~~~G~~---~v~l~~~G~~YFic~---v~~HC 117 (154)
..++++.||++++++.+. .|++..=--...+ ..+ ......|.. .++.+.+|++||-|- ...|=
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~d-----G~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~ 134 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPG-----GGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHI 134 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGG-----GGGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHH
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCC-----CCCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHH
Confidence 357899999999988764 4554321100111 001 011344544 567788999999994 34566
Q ss_pred CCCCeEEEEeeCCC
Q 043552 118 LGGMRFSIDVKENP 131 (154)
Q Consensus 118 ~~GmKl~I~V~~~~ 131 (154)
..||...+.|.+..
T Consensus 135 ~~Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 135 ANGMYGLILVEPKE 148 (442)
T ss_dssp HTTCEEEEEEECTT
T ss_pred hCccEEEEEEeCCC
Confidence 78999999998654
No 54
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=84.59 E-value=1.9 Score=35.08 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=49.4
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCC----CCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAG----HCL 118 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~----HC~ 118 (154)
.++++.||++++++.+. .|.+..=.....+ . .++......|.. .++++.+|++||-|...+ |=.
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~--~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~ 147 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G--GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVT 147 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G--GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C--CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHh
Confidence 57889999999988864 3555321111100 0 011112344544 577788999999999764 566
Q ss_pred CCCeEEEEeeCCC
Q 043552 119 GGMRFSIDVKENP 131 (154)
Q Consensus 119 ~GmKl~I~V~~~~ 131 (154)
.||...+.|....
T Consensus 148 ~Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 148 SGMNGAIMVLPRD 160 (340)
T ss_dssp TTCEEEEEEECTB
T ss_pred CcCEEEEEEccCc
Confidence 8999999998654
No 55
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=83.28 E-value=4.3 Score=33.71 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=43.0
Q ss_pred CceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCC---CCe
Q 043552 51 QYNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLG---GMR 122 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~---GmK 122 (154)
...+-+|..++|.-++. -|+-.. .+ + +....--.|.. .++.+++|.||..|+ .-|.. .|+
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~I-P~--l-------g~k~DaiPGr~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~ 219 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFI-PR--L-------GSQIYAMAGMQTRLHLIANEPGTYDGISA--SYSGPGFSGMK 219 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEE-GG--G-------TEEEEECBTSCEEEEEECCSCBCCEEBCC--SCCSTTTTTCC
T ss_pred eEEEeCCCEEEEEEEeCCccceeee-cc--c-------CcEEeecCCcceeeEEecCCCeEEEEecc--ccchhhHHhcc
Confidence 45678999999998864 344321 11 1 00001123332 578899999999999 58886 599
Q ss_pred EEEEee
Q 043552 123 FSIDVK 128 (154)
Q Consensus 123 l~I~V~ 128 (154)
+.|.|.
T Consensus 220 ~~v~vv 225 (315)
T 1fft_B 220 FKAIAT 225 (315)
T ss_dssp EECCBC
T ss_pred ceEEEe
Confidence 988887
No 56
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=81.67 E-value=3.5 Score=36.11 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=50.2
Q ss_pred CceeEeCCEEEEEEcCCc----ccEEEE--Cc---ccccc-ccCCCCcccccccCcc---eEEcc-CCceEEEEcCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEGQ----HNVYEV--TQ---ATYRS-CVASSGVIGKYESGND---QVTLT-EAKKYWFICNVAGH 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~----HsV~~V--~~---~~y~~-C~~~~~~~~~~~~G~~---~v~l~-~~G~~YFic~v~~H 116 (154)
.++++.||+|+.++.+.- +++..= .+ ...|. -..+. .....|.+ .++++ .+|++||-|-...|
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq---~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q 111 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ---CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQ 111 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB---CCBCTTCEEEEEEECSSCCEEEEEECCSSSG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc---CCcCCCCeEEEEEEeCccceeEEEEEcCccc
Confidence 588999999999998642 122110 10 01110 00000 11234443 57777 89999999999888
Q ss_pred CCCCCeEEEEeeCCCC
Q 043552 117 CLGGMRFSIDVKENPT 132 (154)
Q Consensus 117 C~~GmKl~I~V~~~~~ 132 (154)
=..||...+.|.....
T Consensus 112 ~~~Gl~G~liV~~~~~ 127 (534)
T 1zpu_A 112 YEDGMKGLFIIKDDSF 127 (534)
T ss_dssp GGGTCEEEEEEECTTC
T ss_pred ccCcceeeEEeCCCCC
Confidence 8889999999987653
No 57
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=80.56 E-value=5.7 Score=32.28 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=46.5
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--Ccc---cccc-ccCCCCcccccccCcc---eEEccCCceEEEEcCCCCC-C
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQA---TYRS-CVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGH-C 117 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~~---~y~~-C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~H-C 117 (154)
.++++.||+|++++.+. .|++..= ... ..|. -..+ ......|.+ .++++.+|++||-|..... .
T Consensus 35 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t---~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 111 (318)
T 3g5w_A 35 LIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHAT---QHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEH 111 (318)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTT---BCCBCTTCEEEEEEECCSCEEEEEECCSSHHHH
T ss_pred eEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccc---cccCCCCCEEEEEEEcCCCEEEEEEccCChhhh
Confidence 57899999999988854 3444321 110 1110 0000 011234444 5778899999999987421 1
Q ss_pred --CCCCeEEEEeeCCC
Q 043552 118 --LGGMRFSIDVKENP 131 (154)
Q Consensus 118 --~~GmKl~I~V~~~~ 131 (154)
..||...+.|.+..
T Consensus 112 ~~~~Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 112 VTMRGMWGPLIVEPKN 127 (318)
T ss_dssp HHHSCCEEEEEEECSS
T ss_pred hccCCCEEEEEEcCCC
Confidence 26999999997654
No 58
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=79.80 E-value=4.5 Score=32.61 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=43.2
Q ss_pred ceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCc---ceEEccCCceEEEEcCCCCCCCCC---CeE
Q 043552 52 YNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGN---DQVTLTEAKKYWFICNVAGHCLGG---MRF 123 (154)
Q Consensus 52 ~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~---~~v~l~~~G~~YFic~v~~HC~~G---mKl 123 (154)
..+.+|+.++|.-++. .|+-.. .+ + +....--+|. ..++.+++|.||..|+ .-|..| |++
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~i-p~--l-------~~k~da~PG~~n~~~~~~~~~G~y~g~Cs--e~CG~~H~~M~~ 240 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTV-PA--F-------GVKQDAVPGRLAQLWFRAEREGIFFGQCS--ELCGISHAYMPI 240 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEE-GG--G-------TEEEEECBTCCEEEEEECCSCEEEEECCC--SCCSTTGGGCCE
T ss_pred EEEecCCEEEEEEEECcccceeee-cc--c-------CceEEecCCceeEEEEecCCcEEEEEECh--HhcccCcccCeE
Confidence 5678999999988853 444321 11 1 1100112232 2678899999999999 588864 898
Q ss_pred EEEeeCC
Q 043552 124 SIDVKEN 130 (154)
Q Consensus 124 ~I~V~~~ 130 (154)
.|.|.+.
T Consensus 241 ~v~vv~~ 247 (262)
T 2gsm_B 241 TVKVVSE 247 (262)
T ss_dssp EEEEECH
T ss_pred EEEEEcH
Confidence 8888753
No 59
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=77.45 E-value=2.8 Score=30.74 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=26.0
Q ss_pred CceeEeCCEEEEE---EcC--------CcccEEEECccccccccCCC
Q 043552 51 QYNYSIGDVLVFK---YTE--------GQHNVYEVTQATYRSCVASS 86 (154)
Q Consensus 51 ~~~f~vGDtLvF~---y~~--------~~HsV~~V~~~~y~~C~~~~ 86 (154)
...+++||.|-+- |+. ....+..|++++|+.|+...
T Consensus 21 ~v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 21 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred eEEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 3567899999764 322 13567899999999998754
No 60
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=76.85 E-value=6.1 Score=34.52 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=50.1
Q ss_pred CceeEeCCEEEEEEcCCc----ccEEEE--Cc--cc-ccc-ccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEGQ----HNVYEV--TQ--AT-YRS-CVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHC 117 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~----HsV~~V--~~--~~-y~~-C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC 117 (154)
.++++.||+|+.++.+.- +++..= .+ .. .|. -..+. .....|.+ .++++.+|++||-|-...+=
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq---~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~ 111 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ---CAINPGETFFYNFTVDNPGTFFYHGHLGMQR 111 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB---CCBCTTCEEEEEEECCSCEEEEEEECSTTTG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc---CCcCCCCeEEEEEECCCCEEEEEEECchhHH
Confidence 688999999999887542 233210 11 00 110 00000 11234544 57788999999999998888
Q ss_pred CCCCeEEEEeeCCC
Q 043552 118 LGGMRFSIDVKENP 131 (154)
Q Consensus 118 ~~GmKl~I~V~~~~ 131 (154)
..||-..+.|....
T Consensus 112 ~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 112 SAGLYGSLIVDPPQ 125 (552)
T ss_dssp GGTCEEEEEEECCT
T ss_pred hccCeeeEEEeCCc
Confidence 88999999998764
No 61
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=76.64 E-value=6.2 Score=32.53 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=41.6
Q ss_pred ceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCC---CCeE
Q 043552 52 YNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLG---GMRF 123 (154)
Q Consensus 52 ~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~---GmKl 123 (154)
..+.+|+.++|.-++. -|+-.. .+- +....--+|.. .++.+++|.||..|+ .-|.. .|++
T Consensus 191 lvlP~g~~V~~~ltS~DViHsf~i-P~l---------g~k~daiPG~~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~~ 258 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVIHAWTI-PAF---------AVKQDAVPGRIAQLWFSVDQEGVYFGQCS--ELCGINHAYMPI 258 (298)
T ss_dssp EEEESSSEEEEEEEESSSCEEEEE-GGG---------TEEEEECTTCCEEEEEECSSSEEEEECCC--SCCSTTTTSCCE
T ss_pred EEEEcCCEEEEEEEeCCccceeeE-ccc---------CceEEecCCceEEEEEEeCCCEEEEEEcc--cccCcCccCCee
Confidence 3566788888877753 444321 110 00011123332 578899999999999 57875 5999
Q ss_pred EEEeeCC
Q 043552 124 SIDVKEN 130 (154)
Q Consensus 124 ~I~V~~~ 130 (154)
.|.|.+.
T Consensus 259 ~v~vvs~ 265 (298)
T 3hb3_B 259 VVKAVSQ 265 (298)
T ss_dssp EEEEECH
T ss_pred EEEEEcH
Confidence 9988763
No 62
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=76.50 E-value=4.3 Score=31.83 Aligned_cols=66 Identities=21% Similarity=0.316 Sum_probs=41.8
Q ss_pred CceeEeCCEEEEEEcCC--cccEEEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCC---CCe
Q 043552 51 QYNYSIGDVLVFKYTEG--QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLG---GMR 122 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~--~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~---GmK 122 (154)
...+.+|+.+.|.-++. .|+... .+ + +....--.|.. .++.+++|.||..|+ .-|.. .|+
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~I-P~--l-------gvK~daiPGr~n~l~~~~~~pG~y~g~Cs--E~CG~~Hs~M~ 109 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFI-PR--L-------GSQIYAMAGMQTRLHLIANEPGTYDGICA--EICGPGHSGMK 109 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEE-GG--G-------TEEEEECTTCCEEEEECCSSSEEEEEEEC--SCCSTTSTTCC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEe-cc--c-------CcEEEecCCceEEEEEEeCCCeEEEEEcc--cccccchhhce
Confidence 35677888888888753 344321 11 1 00001122322 567789999999999 57875 599
Q ss_pred EEEEee
Q 043552 123 FSIDVK 128 (154)
Q Consensus 123 l~I~V~ 128 (154)
+.|.|.
T Consensus 110 ~~v~vv 115 (205)
T 1cyx_A 110 FKAIAT 115 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999888
No 63
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=76.20 E-value=6 Score=34.39 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=48.1
Q ss_pred CceeEeCCEEEEEEcCCc--------ccEEEE--CccccccccCCCCc----ccccccCcc---eEEc-cCCceEEEEcC
Q 043552 51 QYNYSIGDVLVFKYTEGQ--------HNVYEV--TQATYRSCVASSGV----IGKYESGND---QVTL-TEAKKYWFICN 112 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~--------HsV~~V--~~~~y~~C~~~~~~----~~~~~~G~~---~v~l-~~~G~~YFic~ 112 (154)
.++++.||+|+.++.+.- +++..= .... ... .+++ ......|.+ .+++ +.+|++||-|-
T Consensus 56 ~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~--~~~-~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H 132 (521)
T 1v10_A 56 LITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAG--TTE-MDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSH 132 (521)
T ss_dssp CEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTT--CGG-GSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccC--CCc-cCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEec
Confidence 578899999999887542 222110 1100 000 1111 011234444 5664 57899999999
Q ss_pred CCCCCCCCCeEEEEeeCCC
Q 043552 113 VAGHCLGGMRFSIDVKENP 131 (154)
Q Consensus 113 v~~HC~~GmKl~I~V~~~~ 131 (154)
...|=..||-..+.|..+.
T Consensus 133 ~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 133 LSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp STTGGGGTCEEEEEEECTT
T ss_pred cCCchhcCceEEEEEcCCc
Confidence 9888888999999998754
No 64
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=75.99 E-value=2.5 Score=34.38 Aligned_cols=36 Identities=8% Similarity=-0.015 Sum_probs=31.4
Q ss_pred eEEccCCceEEEEcCCCCCC-CCCCeEEEEeeCCCCC
Q 043552 98 QVTLTEAKKYWFICNVAGHC-LGGMRFSIDVKENPTL 133 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC-~~GmKl~I~V~~~~~~ 133 (154)
.++.+.+|.++|.|-...|+ ..||...+.|.....+
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~~ 322 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWDN 322 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCCT
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCCc
Confidence 56778899999999998899 9999999999876655
No 65
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=75.16 E-value=6.6 Score=34.09 Aligned_cols=80 Identities=15% Similarity=0.147 Sum_probs=49.8
Q ss_pred CceeEeCCEEEEEEcCCc--------ccEEEE--CccccccccCCCCc----ccccccCcc---eEEc-cCCceEEEEcC
Q 043552 51 QYNYSIGDVLVFKYTEGQ--------HNVYEV--TQATYRSCVASSGV----IGKYESGND---QVTL-TEAKKYWFICN 112 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~--------HsV~~V--~~~~y~~C~~~~~~----~~~~~~G~~---~v~l-~~~G~~YFic~ 112 (154)
.++++.||+|+.++.+.- .++..= .+.. .. ..+++ ......|.+ .+++ +.+|++||-|-
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~--~~-~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH 112 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKG--TN-WADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSH 112 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTT--CG-GGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCC--Cc-cccCCCccccCCCCCCCeEEEEEEeCCCCceeeeecc
Confidence 578999999999887542 233221 1100 00 01111 011234444 5677 67899999999
Q ss_pred CCCCCCCCCeEEEEeeCCCCC
Q 043552 113 VAGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 113 v~~HC~~GmKl~I~V~~~~~~ 133 (154)
...+=..|+...+.|..+..+
T Consensus 113 ~~~q~~~GL~G~lIV~~~~~~ 133 (495)
T 3t6v_A 113 LTTQYCDGLRGPFVVYDPNDP 133 (495)
T ss_dssp STTGGGGTCEEEEEEECTTCT
T ss_pred chhHHhcCceEEEEEcCcccc
Confidence 988777899999999865443
No 66
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=74.15 E-value=4.8 Score=32.88 Aligned_cols=78 Identities=17% Similarity=0.251 Sum_probs=45.9
Q ss_pred CceeEeCCEEEEEEcCC---cccEEE----ECcc-ccccc-cCCCCcccccccCcc---eEEccCCceEEEEcCCCC--C
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYE----VTQA-TYRSC-VASSGVIGKYESGND---QVTLTEAKKYWFICNVAG--H 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~----V~~~-~y~~C-~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~--H 116 (154)
.++++.||++++++.+. .+++.. +... ..|.= ..+. .....|.. .++++.+|++||-|.... |
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq---~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q 112 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQ---QPIEAGDSYTYKFKADRIGTLWYHCHVNVNEH 112 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTB---CCBCTTCEEEEEEECCSCEEEEEECCSSHHHH
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCcccc---CccCCCCeEEEEEECCCCEEEEEEecCCchhh
Confidence 57899999999988753 222211 1110 01100 0000 11234443 577888999999998654 4
Q ss_pred CC-CCCeEEEEeeCCC
Q 043552 117 CL-GGMRFSIDVKENP 131 (154)
Q Consensus 117 C~-~GmKl~I~V~~~~ 131 (154)
=. .||-..+.|.+..
T Consensus 113 ~~~~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 113 VGVRGMWGPLIVDPKQ 128 (339)
T ss_dssp TTTSCCEEEEEEECSS
T ss_pred hhcCCceEeEEecCCC
Confidence 44 8999999887543
No 67
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=73.94 E-value=5.3 Score=35.10 Aligned_cols=78 Identities=9% Similarity=0.073 Sum_probs=49.7
Q ss_pred CceeEeCCEEEEEEcCCc----ccEEEE--Cc---ccccc-ccCCCCccccccc-Ccc---eEEccCCceEEEEcCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEGQ----HNVYEV--TQ---ATYRS-CVASSGVIGKYES-GND---QVTLTEAKKYWFICNVAGH 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~----HsV~~V--~~---~~y~~-C~~~~~~~~~~~~-G~~---~v~l~~~G~~YFic~v~~H 116 (154)
.++++.||+|+.++.+.- +++..= .. ...|. -..+. ..... |.+ .++++.+|++||-|-...|
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq---~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q 144 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTE---CPIPPKGGQRTYRWRARQYGTSWYHSHFSAQ 144 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTB---CCBCTTTEEEEEEEECCSCEEEEEEECSTTG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCcccc---CccCCCCCeEEEEEECCCCEEEEEEEcccch
Confidence 578899999999887532 333221 11 01110 00000 11234 544 6788899999999999888
Q ss_pred CCCCCeEEEEeeCCC
Q 043552 117 CLGGMRFSIDVKENP 131 (154)
Q Consensus 117 C~~GmKl~I~V~~~~ 131 (154)
=..||-..+.|..+.
T Consensus 145 ~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 145 YGNGVVGTIQINGPA 159 (559)
T ss_dssp GGGTCEEEEEEECCC
T ss_pred hcCCceEEEEecCCC
Confidence 888999999998643
No 68
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=73.06 E-value=8 Score=33.62 Aligned_cols=80 Identities=14% Similarity=0.202 Sum_probs=49.8
Q ss_pred CceeEeCCEEEEEEcCCc--------ccEEEE--CccccccccCCCCc----ccccccCcc---eEEc-cCCceEEEEcC
Q 043552 51 QYNYSIGDVLVFKYTEGQ--------HNVYEV--TQATYRSCVASSGV----IGKYESGND---QVTL-TEAKKYWFICN 112 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~--------HsV~~V--~~~~y~~C~~~~~~----~~~~~~G~~---~v~l-~~~G~~YFic~ 112 (154)
.++++.||+|+.++.+.- +++..= .+.. .. ..+++ ......|.+ .+++ +.+|++||-|-
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~--~~-~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH 111 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHG--TN-WADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSH 111 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTT--CG-GGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEEC
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCC--Cc-cccCCCccccCCCCCCCeEEEEEEcCCCCceeeeecc
Confidence 588999999999887541 233221 1100 00 01111 011234544 5677 57899999999
Q ss_pred CCCCCCCCCeEEEEeeCCCCC
Q 043552 113 VAGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 113 v~~HC~~GmKl~I~V~~~~~~ 133 (154)
...+=..|+...+.|..+..+
T Consensus 112 ~~~q~~~GL~G~lIV~~~~~~ 132 (499)
T 3pxl_A 112 LSTQYCDGLRGPFVVYDPNDP 132 (499)
T ss_dssp STTGGGGTCEEEEEEECTTCT
T ss_pred chhHHhccceeEEEEcCCccc
Confidence 988777899999999865543
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=69.44 E-value=9.9 Score=33.86 Aligned_cols=34 Identities=9% Similarity=0.169 Sum_probs=29.6
Q ss_pred eEEccCCceEEEEcCCCCCCCCCCeEEEEeeCCC
Q 043552 98 QVTLTEAKKYWFICNVAGHCLGGMRFSIDVKENP 131 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~~~~ 131 (154)
.++++.+|++||-|-.+.+=..|+...|.|..+.
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 6788899999999999888888999999998643
No 70
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=68.44 E-value=5.9 Score=33.78 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=48.1
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--Cc-cccccccCCCCcccccccCcc---eEEccC-CceEEEEcCC----CCC
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQ-ATYRSCVASSGVIGKYESGND---QVTLTE-AKKYWFICNV----AGH 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~-~~y~~C~~~~~~~~~~~~G~~---~v~l~~-~G~~YFic~v----~~H 116 (154)
.++++.||+|+.++.+. .+++..= .. .+.|. .+......|.+ .++++. +|++||-|-. ..|
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG-----~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q 125 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMG-----GPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQ 125 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSC-----SGGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHH
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCC-----CCcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhh
Confidence 57889999999998865 3333221 10 11110 01112233443 688886 8999999997 335
Q ss_pred CCCCCeEEEEeeCCC
Q 043552 117 CLGGMRFSIDVKENP 131 (154)
Q Consensus 117 C~~GmKl~I~V~~~~ 131 (154)
=..||-..+.|....
T Consensus 126 ~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 126 VYNGLAGMWLVEDEV 140 (451)
T ss_dssp HHTTCEEEEEEECHH
T ss_pred HhhcceEEEEEecCc
Confidence 668999999998764
No 71
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=65.72 E-value=32 Score=27.59 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=23.4
Q ss_pred cCCceEEEEcCCCCC------CCCCCeEEEEeeCCCCC
Q 043552 102 TEAKKYWFICNVAGH------CLGGMRFSIDVKENPTL 133 (154)
Q Consensus 102 ~~~G~~YFic~v~~H------C~~GmKl~I~V~~~~~~ 133 (154)
...|++||-|-+.+. =..||-..+.|.....+
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~ 150 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV 150 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeeccccc
Confidence 356999999976543 24699999999876543
No 72
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=64.08 E-value=17 Score=29.17 Aligned_cols=82 Identities=11% Similarity=0.122 Sum_probs=46.2
Q ss_pred CceeEeCCEEEEEEcCC---cccEEE----ECccccccccCCCCc------ccccccCcc---eEEccCC----------
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYE----VTQATYRSCVASSGV------IGKYESGND---QVTLTEA---------- 104 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~----V~~~~y~~C~~~~~~------~~~~~~G~~---~v~l~~~---------- 104 (154)
.++++.||+|++++.+. .+++.. +.. +-|.=...+++ ......|.. .++++.+
T Consensus 61 ~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~ 139 (306)
T 1sdd_A 61 TLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPC 139 (306)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSE
T ss_pred EEEEeCCCEEEEEEEECCCCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCc
Confidence 47899999999988864 223211 110 01100000000 011234443 5666543
Q ss_pred ceEEEEcCCCC--CCCCCCeEEEEeeCCCCC
Q 043552 105 KKYWFICNVAG--HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 105 G~~YFic~v~~--HC~~GmKl~I~V~~~~~~ 133 (154)
|++||-|-... +-..||-..+.|....++
T Consensus 140 GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~ 170 (306)
T 1sdd_A 140 LTHIYYSYVNLVEDFNSGLIGPLLICKKGTL 170 (306)
T ss_dssp EEEEEECCSSSHHHHHTTCCEEEEEECTTCB
T ss_pred eEEEEeccCCchhhhccCceEEEEEccCCCC
Confidence 79999998655 556899999999876543
No 73
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=63.75 E-value=12 Score=29.43 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=25.4
Q ss_pred eEEccCCceEEEEcCCCCCCCCC---CeEEEEeeCC
Q 043552 98 QVTLTEAKKYWFICNVAGHCLGG---MRFSIDVKEN 130 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC~~G---mKl~I~V~~~ 130 (154)
.++.+++|.||..|+ .-|..| |.+.|.|.+.
T Consensus 183 ~~~~~~~G~y~g~Cs--e~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 183 TLMSSRPGLYYGQCS--EICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp EECCSSCEEEEECCC--SCCSTTGGGCCEEEEEECH
T ss_pred EEecCCcEEEEEEeh--hhcccccccCeEEEEEEcH
Confidence 567889999999999 588875 8888887653
No 74
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=63.46 E-value=7 Score=35.98 Aligned_cols=79 Identities=9% Similarity=0.069 Sum_probs=47.4
Q ss_pred CceeEeCCEEEEEEcCCc--------ccEEEECccccccccCCCCcccccccCcc---eEEcc----------CCceEEE
Q 043552 51 QYNYSIGDVLVFKYTEGQ--------HNVYEVTQATYRSCVASSGVIGKYESGND---QVTLT----------EAKKYWF 109 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~--------HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~----------~~G~~YF 109 (154)
.+++++||+|+.++.+.. |.+.. .....| ...++......|.+ .++++ .+|++||
T Consensus 200 ~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~-~~~~~d---G~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wY 275 (770)
T 2r7e_B 200 YIRAEVEDNIMVTFRNQASRPYSFYSSLISY-EEDQRQ---GAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAY 275 (770)
T ss_dssp CCCCCSSSCEEEEEECCSSSCCCCCBTTCCC-CCCSSS---CTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEE
T ss_pred eEEEEcCCEEEEEEEECCCCCcceeeccccc-ccccCC---CCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEe
Confidence 367899999999888641 22211 111100 00001112234544 34455 5699999
Q ss_pred EcCCCC--CCCCCCeEEEEeeCCCCC
Q 043552 110 ICNVAG--HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 110 ic~v~~--HC~~GmKl~I~V~~~~~~ 133 (154)
-|.+.. |...||-..+.|....++
T Consensus 276 Hsh~~~~~q~~~GL~G~liV~~~~~~ 301 (770)
T 2r7e_B 276 SSDVDLEKDVHSGLIGPLLVCHTNTL 301 (770)
T ss_dssp CCCSSSSHHHHTSCCEEEEEECSTTS
T ss_pred eccCCcHHHHhCCceeeEEECCCccc
Confidence 999876 677999999999876544
No 75
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=61.87 E-value=7.6 Score=36.91 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=52.2
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEEC------ccccccccCCCCcccccccCcceEEccCCceEEEEcCCCCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVT------QATYRSCVASSGVIGKYESGNDQVTLTEAKKYWFICNVAGHCLG 119 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~------~~~y~~C~~~~~~~~~~~~G~~~v~l~~~G~~YFic~v~~HC~~ 119 (154)
..++..||+|+.+...- -|++.+-. ...++.|...-+ .+-...++.+.+|++|+-|-+..|=..
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg-----~~~t~~~~~~~~Gt~~~h~h~~~~~~~ 707 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLFPQ-----TSLTLHMWPDTEGTFNVECLTTDHYTG 707 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEECTT-----CEEEEEECCCSCEEEEEEECSHHHHHT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeecCC-----ceEEEEEecCCCeEEEEecCCCcccCC
Confidence 68999999999887742 35554322 112334443211 111125667789999999999999999
Q ss_pred CCeEEEEeeCCCCC
Q 043552 120 GMRFSIDVKENPTL 133 (154)
Q Consensus 120 GmKl~I~V~~~~~~ 133 (154)
||+..+.|......
T Consensus 708 Gm~g~~~V~~~~~~ 721 (1065)
T 2j5w_A 708 GMKQKYTVNQCRRQ 721 (1065)
T ss_dssp TCEEEEEEECCSCC
T ss_pred CcEEEEEEcCCccc
Confidence 99999999776443
No 76
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=61.65 E-value=9.3 Score=33.12 Aligned_cols=78 Identities=12% Similarity=0.156 Sum_probs=47.2
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--C-ccccccccCCCCcccccccCcc---eEEccC--CceEEEEcCCC----C
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--T-QATYRSCVASSGVIGKYESGND---QVTLTE--AKKYWFICNVA----G 115 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~-~~~y~~C~~~~~~~~~~~~G~~---~v~l~~--~G~~YFic~v~----~ 115 (154)
.++++.||+|+.++.+. .+++..= . ....|. .+......|.+ .++++. +|++||-|-.. .
T Consensus 83 tIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG-----~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~ 157 (481)
T 3zx1_A 83 KIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDG-----SPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASK 157 (481)
T ss_dssp BEEEETTCEEEEEEEECSSSCBCCEEETCCCCGGGSC-----CTTSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHH
T ss_pred eEEEECCcEEEEEEEeCCCCCeeEEecCcccCCccCC-----CccCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchh
Confidence 57899999999998864 2222110 0 011110 01112234444 566665 79999999853 2
Q ss_pred CCCCCCeEEEEeeCCCCC
Q 043552 116 HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 116 HC~~GmKl~I~V~~~~~~ 133 (154)
|=..|+-..+.|..+..+
T Consensus 158 q~~~GL~G~lIV~~~~~~ 175 (481)
T 3zx1_A 158 QVFMGLAGAFVIKAKKDA 175 (481)
T ss_dssp HHHTTCCEEEEEECSSCT
T ss_pred hhhccceEEEEEcCcccc
Confidence 445799999999876543
No 77
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=60.60 E-value=4.6 Score=34.47 Aligned_cols=75 Identities=12% Similarity=0.016 Sum_probs=48.1
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--Cc-cccc---cccCCCCcccccccCcc---eEEcc-CCceEEEEcC----C
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQ-ATYR---SCVASSGVIGKYESGND---QVTLT-EAKKYWFICN----V 113 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~-~~y~---~C~~~~~~~~~~~~G~~---~v~l~-~~G~~YFic~----v 113 (154)
.++++.||+|+.++.+. .+++..= .. ...| .|.. ..|.+ .++++ .+|++||-|- .
T Consensus 39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i--------~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~ 110 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFAI--------TPGESYNYSFDVVNRAGTYLYHPHPHGLT 110 (448)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGCB--------CTTCEEEEEEECCSCSEEEEEEECCTTTH
T ss_pred eEEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCccC--------CCCCEEEEEEEcCCCCCceEeccCCCCch
Confidence 57899999999998864 2333221 11 0111 1222 33433 57777 7899999998 3
Q ss_pred CCCCCCCCeEEEEeeCCCCC
Q 043552 114 AGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 114 ~~HC~~GmKl~I~V~~~~~~ 133 (154)
..+=..||-..+.|.....+
T Consensus 111 ~~q~~~Gl~G~liV~~~~~~ 130 (448)
T 3aw5_A 111 AKQFYMGQLGLVIVEDSGSD 130 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTT
T ss_pred HHHHhccceEEEEEeCCccc
Confidence 34556899999999876554
No 78
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=59.07 E-value=13 Score=31.43 Aligned_cols=78 Identities=12% Similarity=0.169 Sum_probs=46.4
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEECccccccccCCCCcccccccCcc---eEEcc--CCceEEEEcCCCC----CCC
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEVTQATYRSCVASSGVIGKYESGND---QVTLT--EAKKYWFICNVAG----HCL 118 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~--~~G~~YFic~v~~----HC~ 118 (154)
.++++.||+|+.++.+. .+++..=-- ...+ ..+++......|.+ .+++. .+|++||-|-..+ |=.
T Consensus 48 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~-~~~~--~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~ 124 (439)
T 2xu9_A 48 TLRVRPRDTVRLTLENRLPEPTNLHWHGL-PISP--KVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLF 124 (439)
T ss_dssp EEEECTTCEEEEEEEECSSSCBCCEEETC-CCCT--TTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCCcceEeCCC-CCCc--cccCCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHH
Confidence 57899999999888754 233322100 0000 11121112345554 45653 5899999998643 556
Q ss_pred CCCeEEEEeeCCC
Q 043552 119 GGMRFSIDVKENP 131 (154)
Q Consensus 119 ~GmKl~I~V~~~~ 131 (154)
.||...+.|....
T Consensus 125 ~Gl~G~liV~~~~ 137 (439)
T 2xu9_A 125 AGLLGALVVESSL 137 (439)
T ss_dssp TTCCEEEEECCGG
T ss_pred hhCeEEEEEcCcc
Confidence 7999999997653
No 79
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=58.39 E-value=15 Score=31.57 Aligned_cols=79 Identities=11% Similarity=0.155 Sum_probs=48.4
Q ss_pred CCceeEeCCEEEEEEcCCc--------ccEEEE--CccccccccCCCCc----ccccccCcc---eEEc-cCCceEEEEc
Q 043552 50 QQYNYSIGDVLVFKYTEGQ--------HNVYEV--TQATYRSCVASSGV----IGKYESGND---QVTL-TEAKKYWFIC 111 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~~--------HsV~~V--~~~~y~~C~~~~~~----~~~~~~G~~---~v~l-~~~G~~YFic 111 (154)
..++++.||+|+.++.+.- +++..= .... .. ..+++ ......|.+ .+++ +.+|++||-|
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~--~~-~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~ 110 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG--TN-WADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHS 110 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTT--CG-GGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccC--CC-ccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEe
Confidence 4688999999999887531 222111 1100 00 01111 011234444 4553 5689999999
Q ss_pred CCCCCCCCCCeEEEEeeCCC
Q 043552 112 NVAGHCLGGMRFSIDVKENP 131 (154)
Q Consensus 112 ~v~~HC~~GmKl~I~V~~~~ 131 (154)
-...+=..||-..+.|..+.
T Consensus 111 H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 111 HFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp CSTTGGGGTCEEEEEEECTT
T ss_pred cchhhhhCcceeeEEEcCCC
Confidence 99887788999999998754
No 80
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=58.26 E-value=4.6 Score=27.34 Aligned_cols=16 Identities=38% Similarity=1.036 Sum_probs=12.4
Q ss_pred ceeEeCCEEEEE-EcCC
Q 043552 52 YNYSIGDVLVFK-YTEG 67 (154)
Q Consensus 52 ~~f~vGDtLvF~-y~~~ 67 (154)
..|++||.|+|. |.++
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 459999999995 6544
No 81
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=56.85 E-value=4.7 Score=32.21 Aligned_cols=79 Identities=6% Similarity=-0.014 Sum_probs=48.0
Q ss_pred CCceeEeCCEEEEEEcCC-----cccEEEECccccccc-c--CCCCcc--c--ccccCcc---eEEccCCceEEEEcCCC
Q 043552 50 QQYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSC-V--ASSGVI--G--KYESGND---QVTLTEAKKYWFICNVA 114 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C-~--~~~~~~--~--~~~~G~~---~v~l~~~G~~YFic~v~ 114 (154)
...+++.||+++|...+. .|.+..- ...|+-- + ...++. . ....|.. .++.+.||.+.|.|-+.
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlh-G~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~ 273 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIH-GNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKT 273 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEET-TCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSH
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEc-CCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecCh
Confidence 357899999999888742 1554221 1111100 0 000000 0 1123332 45567899999999999
Q ss_pred CCCCCCCeEEEEeeC
Q 043552 115 GHCLGGMRFSIDVKE 129 (154)
Q Consensus 115 ~HC~~GmKl~I~V~~ 129 (154)
.|=..||...+.|.+
T Consensus 274 ~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 274 EFAELGWMGFFEVSA 288 (288)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred HHHhcCCCEEEEEeC
Confidence 999999999999864
No 82
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=56.58 E-value=11 Score=30.44 Aligned_cols=37 Identities=11% Similarity=-0.109 Sum_probs=29.7
Q ss_pred eEEccCCceEEEEcCCCC-CCCCCCeEEEEeeCCCCCc
Q 043552 98 QVTLTEAKKYWFICNVAG-HCLGGMRFSIDVKENPTLI 134 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~-HC~~GmKl~I~V~~~~~~~ 134 (154)
.+..+.+|.++|.|.... |=..||...+.|.....+.
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~~~ 329 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWNDD 329 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTT
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCchh
Confidence 467788999999999763 6578999999998766553
No 83
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=56.45 E-value=7.6 Score=30.73 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=49.5
Q ss_pred CCceeEeCCEEEEEEcCC---cccEEE------ECccc-cccccCCCCccc--ccccCcc---eEEcc---CCceEEEEc
Q 043552 50 QQYNYSIGDVLVFKYTEG---QHNVYE------VTQAT-YRSCVASSGVIG--KYESGND---QVTLT---EAKKYWFIC 111 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~---~HsV~~------V~~~~-y~~C~~~~~~~~--~~~~G~~---~v~l~---~~G~~YFic 111 (154)
...+++.||++++.+.+. .|++.. +...+ ++.-........ ....|.. .+..+ .+|.++|-|
T Consensus 168 p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HC 247 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHC 247 (276)
T ss_dssp CCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEEC
Confidence 357899999998877642 455422 11111 110000000000 1123332 34555 489999999
Q ss_pred CCCCCCCCCCeEEEEeeCCCCC
Q 043552 112 NVAGHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 112 ~v~~HC~~GmKl~I~V~~~~~~ 133 (154)
-...|=..||...+.|.+...+
T Consensus 248 H~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 248 HVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp CSHHHHHTTCEEEEEEECTTSC
T ss_pred CCchHhhCCCeEEEEEeCCCCC
Confidence 9999999999999999877544
No 84
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=54.94 E-value=8.1 Score=32.36 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=33.6
Q ss_pred eEEccCCceEEEEcCCCCCCCCCCeEEEEeeCCCCCccccccCCCCccc
Q 043552 98 QVTLTEAKKYWFICNVAGHCLGGMRFSIDVKENPTLIQQQLQHQPHHQK 146 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC~~GmKl~I~V~~~~~~~~~~~~~~~~~~~ 146 (154)
.+..+.+|.++|-|-...|=..||...+.|...+.| ....+|+.|
T Consensus 402 ~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~~----~~~~~~~~~ 446 (447)
T 2dv6_A 402 DFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKND----SIMHEGPAK 446 (447)
T ss_dssp EEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSCC----SSEEESCC-
T ss_pred EEECCCCEEEEEEecCcCccccCCEEEEEEeCCCCc----cccCCCccC
Confidence 466788999999999999988999999999766543 344444443
No 85
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=54.42 E-value=9 Score=31.06 Aligned_cols=36 Identities=8% Similarity=0.017 Sum_probs=30.1
Q ss_pred eEEccCCceEEEEcCCCCCC-CCCCeEEEEeeCCCCC
Q 043552 98 QVTLTEAKKYWFICNVAGHC-LGGMRFSIDVKENPTL 133 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC-~~GmKl~I~V~~~~~~ 133 (154)
.++.+.+|.++|.|....|| ..||...+.+...+.+
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~~ 311 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAENP 311 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCCT
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCCCc
Confidence 56677899999999999998 7899999999876544
No 86
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=54.03 E-value=1.6 Score=35.31 Aligned_cols=76 Identities=14% Similarity=0.188 Sum_probs=33.1
Q ss_pred CceeEeCCEEEEEEcCCc-----ccEEEECcccccc--ccCCCCcccccccCcc---eEEccCCceEEEEcCCCCCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEGQ-----HNVYEVTQATYRS--CVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGHCLGG 120 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~-----HsV~~V~~~~y~~--C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~~G 120 (154)
..+++.||+++|+.-+.. |++. +....+.. -. .+ .+ ....|.. .++.+.+|.++|.|-...|-..|
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~h-lhG~~~~~dG~~-~d-tv-~l~pger~~v~~~~~~pG~~~~hch~~~H~~~G 291 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIH-FNGQVLEQNHHK-IS-AI-TLVSATSTTANMTVSPEGRWTIASLIPRHFQAG 291 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCB-CSSTTCEETTEE-CS-CC-CEETTCCBC--------CCCCCBCCSTTTGGGT
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEE-ECCcEeeeCCEE-cc-eE-EECCCcEEEEEEEcCCCeEEEEEeCChHHHhcC
Confidence 467889999999877531 2221 11111111 00 00 11 1122332 56677899999999999999999
Q ss_pred CeEEEEeeCC
Q 043552 121 MRFSIDVKEN 130 (154)
Q Consensus 121 mKl~I~V~~~ 130 (154)
|...+.|.+.
T Consensus 292 M~~~~~V~~~ 301 (306)
T 1sdd_A 292 MQAYIDIKNC 301 (306)
T ss_dssp CBCCC-----
T ss_pred CeEEEEEecC
Confidence 9999998754
No 87
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=52.07 E-value=21 Score=28.14 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=46.5
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--Cc-cccccccCCCCcccccccCcc---eEEccC-------------CceEE
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQ-ATYRSCVASSGVIGKYESGND---QVTLTE-------------AKKYW 108 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~-~~y~~C~~~~~~~~~~~~G~~---~v~l~~-------------~G~~Y 108 (154)
.++++.||+|+.++.+. .++|..= .. ...|.-.... .....|.+ .++++. +|++|
T Consensus 37 ~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t~---~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~ 113 (276)
T 3kw8_A 37 LIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMNK---SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWH 113 (276)
T ss_dssp CEEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTT---CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEE
T ss_pred eEEEECCCEEEEEEEECCCCCccEeecCcccCCccCCCcCCc---CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEE
Confidence 47899999999988864 2232210 00 0111000000 11234444 566653 58898
Q ss_pred EEcCCCC------CCCCCCeEEEEeeCCCCC
Q 043552 109 FICNVAG------HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 109 Fic~v~~------HC~~GmKl~I~V~~~~~~ 133 (154)
|-|-..+ |=..||-..+.|.....+
T Consensus 114 YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~ 144 (276)
T 3kw8_A 114 YHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV 144 (276)
T ss_dssp EECSSSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred EecCccccccchhhhhCccEEEEEEecCCCc
Confidence 9998754 455799999999877654
No 88
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=51.13 E-value=9.9 Score=36.10 Aligned_cols=80 Identities=10% Similarity=0.115 Sum_probs=52.8
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCCc-cc--ccccCcc---eEEccCCceEEEEcCCCCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSGV-IG--KYESGND---QVTLTEAKKYWFICNVAGHCLG 119 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~~-~~--~~~~G~~---~v~l~~~G~~YFic~v~~HC~~ 119 (154)
..+++.|++++|++-+. .|++. +..-.+. . ++. .. ....|.. .++.+.+|.|+|.|....|=..
T Consensus 272 ~l~v~~Ge~vRlRliNag~~~~~~~~~-i~Gh~f~---v-~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~ 346 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGNEVDVHAAF-FHGQALT---N-KNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKA 346 (1065)
T ss_dssp CCEEETTCEEEEEEEECSSTTCCEEEE-ETTCCEE---E-TTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHT
T ss_pred ceEECCCCEEEEEEEcCCcccceeEEE-EcCCEEE---E-CCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhC
Confidence 57899999999998853 23332 2222222 1 110 00 1233433 5677889999999999999899
Q ss_pred CCeEEEEeeCCCCCcc
Q 043552 120 GMRFSIDVKENPTLIQ 135 (154)
Q Consensus 120 GmKl~I~V~~~~~~~~ 135 (154)
||...+.|...+.+++
T Consensus 347 Gm~~~~~V~~~~~~~~ 362 (1065)
T 2j5w_A 347 GLQAFFQVQECNKSSS 362 (1065)
T ss_dssp TCEEEEEEECSCCCCC
T ss_pred CCEEEEEEecCCCccc
Confidence 9999999987665543
No 89
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=48.07 E-value=96 Score=24.62 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=22.1
Q ss_pred CCceEEEEcCCCC------CCCCCCeEEEEeeCCCCC
Q 043552 103 EAKKYWFICNVAG------HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 103 ~~G~~YFic~v~~------HC~~GmKl~I~V~~~~~~ 133 (154)
..|++||-|-..+ +=..||-..+.|.....+
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~ 166 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL 166 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEeccccc
Confidence 4699999986533 223599999999866543
No 90
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=45.49 E-value=13 Score=30.60 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=50.0
Q ss_pred CceeEeCCEEEEEEcC---CcccEEE------ECccc-cccccCCCCcc--c--ccccCcc---eEEc---cCCceEEEE
Q 043552 51 QYNYSIGDVLVFKYTE---GQHNVYE------VTQAT-YRSCVASSGVI--G--KYESGND---QVTL---TEAKKYWFI 110 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~---~~HsV~~------V~~~~-y~~C~~~~~~~--~--~~~~G~~---~v~l---~~~G~~YFi 110 (154)
..+++.||+++|.+.+ ..|.+.. |...+ +. ...+... . ....|.. .++. +.+|.++|-
T Consensus 210 ~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~--~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILT--GPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCC--STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred cEEeCCCCEEEEEEEcCCccccccEecCcEEEEeccCccc--CCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 4789999999988764 2455432 21111 10 0000000 0 1123433 3443 578999999
Q ss_pred cCCCCCCCCCCeEEEEeeCCCCCc
Q 043552 111 CNVAGHCLGGMRFSIDVKENPTLI 134 (154)
Q Consensus 111 c~v~~HC~~GmKl~I~V~~~~~~~ 134 (154)
|-...|=..||...+.|.......
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~~~ 311 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDGTI 311 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTSCC
T ss_pred CCCHHHHhccCcEEEEEecCCCCC
Confidence 999999999999999998765543
No 91
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=45.21 E-value=13 Score=34.00 Aligned_cols=76 Identities=13% Similarity=0.200 Sum_probs=48.5
Q ss_pred CceeEeCCEEEEEEcCC-----cccE------EEECccccccccCCCCcccccccCcc---eEEccCCceEEEEcCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNV------YEVTQATYRSCVASSGVIGKYESGND---QVTLTEAKKYWFICNVAGH 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV------~~V~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~~G~~YFic~v~~H 116 (154)
..+++.||++++..-+. .|++ .+|.... .+ .+ ....|.. .++.+.+|.+.|-|-...|
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~~------~D-tv-~v~Pg~~~~v~~~~~~pG~w~~hCH~~~H 316 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHR------QA-SL-EISPITFLTAQTLLMDLGQFLLFCHISSH 316 (742)
T ss_dssp CCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTEE------CC-SC-CCCTTCCCEEEECCCSCSEECCCCCSSSS
T ss_pred ceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeEe------cc-eE-EeCCCcEEEEEEEeCCCeeEEEEeCChhH
Confidence 46789999999988642 2433 1121100 11 11 1122322 4566789999999999999
Q ss_pred CCCCCeEEEEeeCCCCCc
Q 043552 117 CLGGMRFSIDVKENPTLI 134 (154)
Q Consensus 117 C~~GmKl~I~V~~~~~~~ 134 (154)
=..||...+.|...+.+.
T Consensus 317 ~~~GM~~~~~V~~~~~~~ 334 (742)
T 2r7e_A 317 QHDGMEAYVKVDSCPEEP 334 (742)
T ss_dssp STTSCCBCEEECCCCCCC
T ss_pred HhCCCeEEEEEecCCccc
Confidence 999999888887655443
No 92
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=43.77 E-value=11 Score=30.29 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=28.8
Q ss_pred cCCceEEEEcCCCCCCCCCCeEEEEeeCCCCCc
Q 043552 102 TEAKKYWFICNVAGHCLGGMRFSIDVKENPTLI 134 (154)
Q Consensus 102 ~~~G~~YFic~v~~HC~~GmKl~I~V~~~~~~~ 134 (154)
+.||.+.|-|-+..|=..||...+.|.+.+.+.
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~~ 292 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTM 292 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCCC
Confidence 358999999999999999999999998876654
No 93
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=42.11 E-value=24 Score=31.13 Aligned_cols=74 Identities=11% Similarity=0.267 Sum_probs=45.7
Q ss_pred CceeEeCCEEEEEEcCCc--ccEEEE-CccccccccCCCCcccccccC--cceEEccCCceEEEEcCCCCCCCCCC-eEE
Q 043552 51 QYNYSIGDVLVFKYTEGQ--HNVYEV-TQATYRSCVASSGVIGKYESG--NDQVTLTEAKKYWFICNVAGHCLGGM-RFS 124 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~--HsV~~V-~~~~y~~C~~~~~~~~~~~~G--~~~v~l~~~G~~YFic~v~~HC~~Gm-Kl~ 124 (154)
...++-|..|+|.=-... ..++.+ +-.+...|... +. .|+.= +.+..| ++|.|||..+...-|++|- ++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 487 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVP--PF-SFHAFELGKMYSV-ESGDYFMTASTTELCNDNNLRIH 487 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccC--CC-ccCcccccceEec-CCCceEecCChHHHHhCCceeEE
Confidence 466788888888443321 122222 22344579875 22 23221 123334 4799999999999999998 998
Q ss_pred EEee
Q 043552 125 IDVK 128 (154)
Q Consensus 125 I~V~ 128 (154)
|.|.
T Consensus 488 ~~~~ 491 (491)
T 3l6w_A 488 VHVD 491 (491)
T ss_pred EEeC
Confidence 8874
No 94
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=40.81 E-value=8.6 Score=28.01 Aligned_cols=18 Identities=17% Similarity=0.211 Sum_probs=10.7
Q ss_pred eCCEEEEEEcCCcccEEE
Q 043552 56 IGDVLVFKYTEGQHNVYE 73 (154)
Q Consensus 56 vGDtLvF~y~~~~HsV~~ 73 (154)
.|+.+.|+-.++.++-+.
T Consensus 77 ~gK~V~~~S~AgY~S~V~ 94 (126)
T 4dny_A 77 EGKMVRFVSSAGYSSTVF 94 (126)
T ss_dssp TTCEEEEEEECSSCEEEE
T ss_pred CCCEEEEEEecCccEEEE
Confidence 566667766666554443
No 95
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=40.57 E-value=23 Score=29.55 Aligned_cols=76 Identities=8% Similarity=0.127 Sum_probs=48.3
Q ss_pred CceeEeCCEEEEEEcCC----cccEEEECccccccccCC----CC-cc-----c--ccccCcc---eEEccCCceEEEEc
Q 043552 51 QYNYSIGDVLVFKYTEG----QHNVYEVTQATYRSCVAS----SG-VI-----G--KYESGND---QVTLTEAKKYWFIC 111 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~----~HsV~~V~~~~y~~C~~~----~~-~~-----~--~~~~G~~---~v~l~~~G~~YFic 111 (154)
..+++.|++++|+.-+. .|++..- .|... ++ .+ . ....|.. .++.+.+|.+++.|
T Consensus 205 ~l~v~~G~~vrlrliN~~~~~~~~~~i~------g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~ 278 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGGPNLVSSFHVI------GEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVD 278 (442)
T ss_dssp CEEEETTCEEEEEEEEEESSCCEEEEEE------TCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEE
T ss_pred ceEeCCCCEEEEEEEeCCCCCceeeEEc------CCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCCCCeEEEEe
Confidence 46788999999988752 3443221 23221 00 00 0 1122322 56778899999999
Q ss_pred CCCCCC-CCCCeEEEEeeCCCC
Q 043552 112 NVAGHC-LGGMRFSIDVKENPT 132 (154)
Q Consensus 112 ~v~~HC-~~GmKl~I~V~~~~~ 132 (154)
....|+ ..||...+.|...+.
T Consensus 279 ~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 279 HSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp SSTHHHHTTSCEEEEEEESCCC
T ss_pred cccccccccCceEEEEecCCCC
Confidence 988887 789998888887654
No 96
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=40.24 E-value=17 Score=29.30 Aligned_cols=32 Identities=28% Similarity=0.287 Sum_probs=28.0
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEeeCCCCCc
Q 043552 103 EAKKYWFICNVAGHCLGGMRFSIDVKENPTLI 134 (154)
Q Consensus 103 ~~G~~YFic~v~~HC~~GmKl~I~V~~~~~~~ 134 (154)
.||.+.|-|-+..|=..||...+.|.......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 47999999999999999999999998776544
No 97
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=38.14 E-value=11 Score=25.56 Aligned_cols=19 Identities=26% Similarity=0.385 Sum_probs=15.4
Q ss_pred cCCceeEeCCEEEEEEcCC
Q 043552 49 SQQYNYSIGDVLVFKYTEG 67 (154)
Q Consensus 49 as~~~f~vGDtLvF~y~~~ 67 (154)
+..+..+.||.|+|++...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 3456789999999999864
No 98
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=37.42 E-value=83 Score=27.30 Aligned_cols=88 Identities=9% Similarity=0.061 Sum_probs=0.0
Q ss_pred ceeEeCCEEEEEEcCCcccEEEE-CccccccccCCCCcccccccCcc---eEEccC-CceEEEEcCCCCCCC----CCCe
Q 043552 52 YNYSIGDVLVFKYTEGQHNVYEV-TQATYRSCVASSGVIGKYESGND---QVTLTE-AKKYWFICNVAGHCL----GGMR 122 (154)
Q Consensus 52 ~~f~vGDtLvF~y~~~~HsV~~V-~~~~y~~C~~~~~~~~~~~~G~~---~v~l~~-~G~~YFic~v~~HC~----~GmK 122 (154)
++++.||+|+.++.+.-..-..+ -..-...-.....+......|.+ .++++. +|++||=|-..++=. .||-
T Consensus 71 I~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~ 150 (534)
T 3abg_A 71 FQVPRGVETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQA 150 (534)
T ss_dssp EEEETTCCEEEEEEECSSSCBCEEEETCCCCTTTTTCSSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCE
T ss_pred EEEeCCcEEEEEEEECCCCCceEEECCCcCCCCCCCCCCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcce
Q ss_pred EEEEeeCCCCCcccccc
Q 043552 123 FSIDVKENPTLIQQQLQ 139 (154)
Q Consensus 123 l~I~V~~~~~~~~~~~~ 139 (154)
..+.|..........++
T Consensus 151 G~liV~~~~~~~~~lp~ 167 (534)
T 3abg_A 151 GLYMLTDPAEDALNLPS 167 (534)
T ss_dssp EEEEEECTTTTTSCTTC
T ss_pred EEEEEECCcccccCCCc
No 99
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=35.33 E-value=27 Score=30.94 Aligned_cols=76 Identities=11% Similarity=-0.007 Sum_probs=47.2
Q ss_pred CceeEeCCEEEEEEcCC-----cccEEEECccccccccCCCC----cccccccCcc---eEEccCCceEEEEcCCCCCCC
Q 043552 51 QYNYSIGDVLVFKYTEG-----QHNVYEVTQATYRSCVASSG----VIGKYESGND---QVTLTEAKKYWFICNVAGHCL 118 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~-----~HsV~~V~~~~y~~C~~~~~----~~~~~~~G~~---~v~l~~~G~~YFic~v~~HC~ 118 (154)
..+++.||++++..-+. .|.+.. ....+.-=. .++ .+ ....|.. .+..+.+|.+.|-|-+..|-.
T Consensus 240 ~l~v~~G~~vrlrliN~~~~~~~h~~hl-hG~~f~vi~-~d~~~~d~v-~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~ 316 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGGSRDIHVVHF-HGQTLLENG-TQQHQLGVW-PLLPGSFKTLEMKASKPGWWLLDTEVGEIQR 316 (647)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEE-TTCCEEECS-SSCEEESSE-EECTTEEEEEEEECCSSEEEEEECCCHHHHT
T ss_pred CeEEcCCCEEEEEEEeCCCCCcceeEEE-cCcEEEEec-CCCcccceE-EECCCeEEEEEEEeccceEeecccCcccccc
Confidence 56788999999887642 243321 111111100 011 11 1123432 456778999999999999999
Q ss_pred CCCeEEEEeeC
Q 043552 119 GGMRFSIDVKE 129 (154)
Q Consensus 119 ~GmKl~I~V~~ 129 (154)
.||...+.|.+
T Consensus 317 ~Gm~~~~~V~~ 327 (647)
T 1sdd_B 317 AGMQTPFLIVD 327 (647)
T ss_dssp TTCEEEEEEEC
T ss_pred cccccceeeec
Confidence 99999999964
No 100
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=33.63 E-value=11 Score=25.63 Aligned_cols=33 Identities=21% Similarity=0.522 Sum_probs=16.8
Q ss_pred ccCCceEEEEcCCCCCC-CCCCeEEEEeeCCCCCcc
Q 043552 101 LTEAKKYWFICNVAGHC-LGGMRFSIDVKENPTLIQ 135 (154)
Q Consensus 101 l~~~G~~YFic~v~~HC-~~GmKl~I~V~~~~~~~~ 135 (154)
+.+.|.|| |.+...- ..+.++.+.|...++++.
T Consensus 84 ~~Dsg~Y~--C~~~~~~~~~~~~v~L~V~~~~~~~~ 117 (124)
T 2nms_A 84 KTDADTYW--CGIEKTGNDLGVTVQVTIDPAPVTQE 117 (124)
T ss_dssp GGGCEEEE--EEEEETTEEEEEEEEEEEECCC----
T ss_pred HHHCEEEE--EEEEcCCCCccEEEEEEEeCCCcCCC
Confidence 34667765 5543211 345567788877666543
No 101
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=33.10 E-value=18 Score=26.35 Aligned_cols=26 Identities=31% Similarity=0.402 Sum_probs=18.1
Q ss_pred cCCceeEeCCEEEEEEcCCcccEEEE
Q 043552 49 SQQYNYSIGDVLVFKYTEGQHNVYEV 74 (154)
Q Consensus 49 as~~~f~vGDtLvF~y~~~~HsV~~V 74 (154)
+..+.+++||.++|.+....--+.+|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 34567899999999998643224444
No 102
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=28.79 E-value=21 Score=24.44 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=23.3
Q ss_pred EEEecCCCCCCCCCCCccccCCceeEeCCEEEEEE
Q 043552 30 VYTVGGDEQWNTGANFDSWSQQYNYSIGDVLVFKY 64 (154)
Q Consensus 30 ~~~VGg~~GW~~~~~Y~~Was~~~f~vGDtLvF~y 64 (154)
+.++||+.| ...++.|... ++.||++.++.
T Consensus 41 ~~~l~DeTG---~I~~tlW~~~--l~~Gdvv~i~n 70 (106)
T 2k75_A 41 QGYIEDDTA---RIRISSFGKQ--LQDSDVVRIDN 70 (106)
T ss_dssp EEEEECSSC---EEEEEEESSC--CCTTEEEEEEE
T ss_pred EEEEEcCCC---eEEEEEEcCc--cCCCCEEEEEe
Confidence 577898877 3467888665 99999999873
No 103
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=28.74 E-value=37 Score=22.20 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=13.6
Q ss_pred CceeEeCCEEEEEEcC
Q 043552 51 QYNYSIGDVLVFKYTE 66 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~ 66 (154)
-..+++||.|.|.+..
T Consensus 51 l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp ECCCCTTCEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEE
Confidence 3579999999999985
No 104
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=28.67 E-value=36 Score=22.67 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=13.8
Q ss_pred CceeEeCCEEEEEEcC
Q 043552 51 QYNYSIGDVLVFKYTE 66 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~ 66 (154)
-..+++||.|.|.|..
T Consensus 59 l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp ECCCCTTCEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEE
Confidence 4679999999999985
No 105
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=28.64 E-value=30 Score=30.00 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=45.9
Q ss_pred CceeEeCCEEEEEEcCC---cccEEEE--Cc-cccccccCCCCcccccccCcc---eEEccC-CceEEEEcCCCC----C
Q 043552 51 QYNYSIGDVLVFKYTEG---QHNVYEV--TQ-ATYRSCVASSGVIGKYESGND---QVTLTE-AKKYWFICNVAG----H 116 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~HsV~~V--~~-~~y~~C~~~~~~~~~~~~G~~---~v~l~~-~G~~YFic~v~~----H 116 (154)
.++++.||+|+.++.+. .+++..= .. ...|. .+......|.+ .++++. +|++||-|-..+ |
T Consensus 49 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG-----~p~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q 123 (488)
T 3od3_A 49 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDG-----GPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQ 123 (488)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCCHHHHC-----CTTCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHH
T ss_pred eEEEeCCeEEEEEEEeCCcCceeEeecccccCcccCC-----CCcCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhh
Confidence 57899999999998864 2222111 00 11110 01112233433 577776 599999998643 4
Q ss_pred CCCCCeEEEEeeCCC
Q 043552 117 CLGGMRFSIDVKENP 131 (154)
Q Consensus 117 C~~GmKl~I~V~~~~ 131 (154)
=..|+-..+.|..+.
T Consensus 124 ~~~GL~G~liV~~~~ 138 (488)
T 3od3_A 124 VAMGLAGLVVIEDDE 138 (488)
T ss_dssp HHTTCCEEEEEECHH
T ss_pred hhccceeEEEEcCcc
Confidence 457999999998654
No 106
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=27.99 E-value=1.2e+02 Score=24.42 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=27.0
Q ss_pred eEEccCCceEEEEcCCCCCCC------CCCeEEEEeeCCC
Q 043552 98 QVTLTEAKKYWFICNVAGHCL------GGMRFSIDVKENP 131 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC~------~GmKl~I~V~~~~ 131 (154)
.++.+.+|.++|-|-...||. .||...|.+...+
T Consensus 240 ~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 240 IIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 566788999999999999963 6788888886554
No 107
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=27.35 E-value=14 Score=26.09 Aligned_cols=12 Identities=25% Similarity=0.567 Sum_probs=10.2
Q ss_pred ceeEeCCEEEEE
Q 043552 52 YNYSIGDVLVFK 63 (154)
Q Consensus 52 ~~f~vGDtLvF~ 63 (154)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 568999999993
No 108
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=27.14 E-value=1.1e+02 Score=26.87 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=45.6
Q ss_pred CceeEeCCEEEEEEcCC---c-----ccEEEECccccccccC-CC-C----cccccccCcc---eEEccC------Cc--
Q 043552 51 QYNYSIGDVLVFKYTEG---Q-----HNVYEVTQATYRSCVA-SS-G----VIGKYESGND---QVTLTE------AK-- 105 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~---~-----HsV~~V~~~~y~~C~~-~~-~----~~~~~~~G~~---~v~l~~------~G-- 105 (154)
.++++.||+|+.++.+. . |.+..-.+ .|.-.. .+ + .......|.+ .++++. +|
T Consensus 70 ~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~ 147 (647)
T 1sdd_B 70 VIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSA 147 (647)
T ss_dssp CEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCS
T ss_pred eEEEeCCCEEEEEEEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCC
Confidence 47899999999999865 2 33221111 110000 00 0 0011233433 567665 57
Q ss_pred --eEEEEcCCC--CCCCCCCeEEEEeeCCCCC
Q 043552 106 --KYWFICNVA--GHCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 106 --~~YFic~v~--~HC~~GmKl~I~V~~~~~~ 133 (154)
++||-|-.. .|=..||-..+.|.....+
T Consensus 148 c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~ 179 (647)
T 1sdd_B 148 CRAWAYYSAVNPEKDIHSGLIGPLLICRKGTL 179 (647)
T ss_dssp EEEEEEECCSSHHHHHTTTCEEEEEEECTTSS
T ss_pred ceEEEEccCCCCcccccccCccCEEEeeCCCc
Confidence 999999873 3556799999999876554
No 109
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=27.14 E-value=55 Score=26.64 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=19.8
Q ss_pred ceEEEEcCCCC------CCCCCCeEEEEeeCCCCC
Q 043552 105 KKYWFICNVAG------HCLGGMRFSIDVKENPTL 133 (154)
Q Consensus 105 G~~YFic~v~~------HC~~GmKl~I~V~~~~~~ 133 (154)
|.+||-|...+ +=..||-..+.|.....+
T Consensus 151 Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~ 185 (343)
T 3cg8_A 151 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV 185 (343)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC
T ss_pred eEEEEecCccccccchhhhhcCCeEEEEEecCCCC
Confidence 67778887532 335699998888765443
No 110
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=26.43 E-value=27 Score=23.06 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=14.7
Q ss_pred CCceeEeCCEEEEEEcCC
Q 043552 50 QQYNYSIGDVLVFKYTEG 67 (154)
Q Consensus 50 s~~~f~vGDtLvF~y~~~ 67 (154)
.-..+++||.|.|.+...
T Consensus 44 ~l~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 44 LPQGLKAGDRVAFSFRLD 61 (82)
T ss_dssp CCSSCSTTCEEEEEEEEE
T ss_pred HhhcCCCCCEEEEEEEEC
Confidence 346799999999999853
No 111
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=25.29 E-value=26 Score=23.80 Aligned_cols=10 Identities=10% Similarity=0.099 Sum_probs=5.6
Q ss_pred ccCCceEEEE
Q 043552 101 LTEAKKYWFI 110 (154)
Q Consensus 101 l~~~G~~YFi 110 (154)
..+.|.||-.
T Consensus 84 ~~Dsg~Y~C~ 93 (129)
T 3rrq_A 84 RNDSGTYLCG 93 (129)
T ss_dssp GGGCEEEEEE
T ss_pred hhHCEEEEEE
Confidence 3466776544
No 112
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=23.67 E-value=19 Score=26.22 Aligned_cols=43 Identities=23% Similarity=0.207 Sum_probs=28.4
Q ss_pred CCCCCCCCCccccCCceeEeCCEEEEEEcC-----------CcccEEEECccccc
Q 043552 37 EQWNTGANFDSWSQQYNYSIGDVLVFKYTE-----------GQHNVYEVTQATYR 80 (154)
Q Consensus 37 ~GW~~~~~Y~~Was~~~f~vGDtLvF~y~~-----------~~HsV~~V~~~~y~ 80 (154)
.||- +.+|.+...-+..++||.+.|=-++ +.-.+.+|.++.|.
T Consensus 19 ~g~~-GVn~~arn~lr~mk~GD~~~fYhs~~~~~~~~~~~~~ivGi~eV~~e~y~ 72 (145)
T 2hd9_A 19 HNVW-GVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV 72 (145)
T ss_dssp HCEE-EECGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE
T ss_pred cCcc-ccCHHHHHHHHhCCCCCEEEEEEccccccCCCCCCceEEEEEEEcCCcEe
Confidence 3555 5688887656789999998774432 22346777666665
No 113
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=23.32 E-value=24 Score=20.62 Aligned_cols=16 Identities=19% Similarity=0.775 Sum_probs=13.4
Q ss_pred cccCCceeEeCCEEEE
Q 043552 47 SWSQQYNYSIGDVLVF 62 (154)
Q Consensus 47 ~Was~~~f~vGDtLvF 62 (154)
.|+++..-++||.+.+
T Consensus 1 ~W~~~~~Y~~Gd~Vty 16 (45)
T 1ed7_A 1 AWQVNTAYTAGQLVTY 16 (45)
T ss_dssp CCCSSEEECTTCCEEE
T ss_pred CccCCceEcCCCEEEE
Confidence 4888889999999765
No 114
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=23.04 E-value=80 Score=25.34 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=27.8
Q ss_pred eEEccCCceEEEEcCCCCCCC------CCCeEEEEeeCCC
Q 043552 98 QVTLTEAKKYWFICNVAGHCL------GGMRFSIDVKENP 131 (154)
Q Consensus 98 ~v~l~~~G~~YFic~v~~HC~------~GmKl~I~V~~~~ 131 (154)
.+..+.+|.+.|-|-...|-. .||...|.+...+
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 466788999999999999998 5777778887654
No 115
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=23.00 E-value=2.1e+02 Score=25.44 Aligned_cols=34 Identities=12% Similarity=0.360 Sum_probs=26.7
Q ss_pred eEEcc-CCceEEEEcCCCC----CCCCCCeEEEEeeCCC
Q 043552 98 QVTLT-EAKKYWFICNVAG----HCLGGMRFSIDVKENP 131 (154)
Q Consensus 98 ~v~l~-~~G~~YFic~v~~----HC~~GmKl~I~V~~~~ 131 (154)
.++++ .+|++||=|-..+ |=..|+-..+.|....
T Consensus 158 ~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 196 (612)
T 2g23_A 158 EYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE 196 (612)
T ss_dssp EECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH
T ss_pred EEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc
Confidence 45555 5899999999766 5668999999998653
No 116
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=22.71 E-value=32 Score=24.13 Aligned_cols=12 Identities=25% Similarity=0.681 Sum_probs=10.4
Q ss_pred CceeEeCCEEEE
Q 043552 51 QYNYSIGDVLVF 62 (154)
Q Consensus 51 ~~~f~vGDtLvF 62 (154)
-+.+++||+|+|
T Consensus 31 ~~~ikvGD~I~f 42 (109)
T 2z0t_A 31 RRQIKPGDIIIF 42 (109)
T ss_dssp GGGCCTTCEEEE
T ss_pred hhcCCCCCEEEE
Confidence 357899999999
No 117
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=21.74 E-value=51 Score=23.31 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=29.0
Q ss_pred eEEEecCC---CCCCCC-------C----CCccccCCceeEeCCEEEEEEcC
Q 043552 29 EVYTVGGD---EQWNTG-------A----NFDSWSQQYNYSIGDVLVFKYTE 66 (154)
Q Consensus 29 ~~~~VGg~---~GW~~~-------~----~Y~~Was~~~f~vGDtLvF~y~~ 66 (154)
..++||+. ..|... . .|..|.....+..|..++|+|-.
T Consensus 24 ~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 24 VFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp EEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred EEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 46889984 359852 2 57889888888889999999954
No 118
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=21.68 E-value=54 Score=21.35 Aligned_cols=17 Identities=24% Similarity=0.233 Sum_probs=13.7
Q ss_pred CceeEeCCEEEEEEcCC
Q 043552 51 QYNYSIGDVLVFKYTEG 67 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~ 67 (154)
..+|.+||.|+|--+.+
T Consensus 27 rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 27 RNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp SSCBCTTCEEEEESTTS
T ss_pred cCCcCCCCEEEEEcCCC
Confidence 57899999999876554
No 119
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=20.65 E-value=1 Score=23.87 Aligned_cols=19 Identities=32% Similarity=0.656 Sum_probs=13.6
Q ss_pred CceeEeCCEEEEEEcCCcc
Q 043552 51 QYNYSIGDVLVFKYTEGQH 69 (154)
Q Consensus 51 ~~~f~vGDtLvF~y~~~~H 69 (154)
++.|.+.|.|.|.|....|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 5788999999998886543
No 120
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=20.43 E-value=69 Score=22.14 Aligned_cols=31 Identities=13% Similarity=0.394 Sum_probs=22.7
Q ss_pred CCCCCC-------CCCcccc-CCceeEeCCEEEEEEcCC
Q 043552 37 EQWNTG-------ANFDSWS-QQYNYSIGDVLVFKYTEG 67 (154)
Q Consensus 37 ~GW~~~-------~~Y~~Wa-s~~~f~vGDtLvF~y~~~ 67 (154)
..|+.. ..|..|. ..+.+..|+.|.|.|..+
T Consensus 27 g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~dG 65 (104)
T 2laa_A 27 GSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFNDG 65 (104)
T ss_dssp SCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEECS
T ss_pred CCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEeCC
Confidence 469853 2588895 666667789999999754
Done!