BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043555
MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTII
AVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILV
STMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLK
KFCSISDDSRSESQSSLKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEH
LLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACL
TNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDED
IQN

High Scoring Gene Products

Symbol, full name Information P value
AT4G17250 protein from Arabidopsis thaliana 3.6e-54
ASG7
AT5G47580
protein from Arabidopsis thaliana 4.6e-54

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043555
        (363 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2130754 - symbol:AT4G17250 "AT4G17250" species...   395  3.6e-54   2
TAIR|locus:2169018 - symbol:ASG7 "AT5G47580" species:3702...   402  4.6e-54   2


>TAIR|locus:2130754 [details] [associations]
            symbol:AT4G17250 "AT4G17250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0010286 "heat acclimation"
            evidence=IEP] [GO:0006914 "autophagy" evidence=RCA] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0010286 EMBL:AY057681 EMBL:AY143931
            IPI:IPI00545992 RefSeq:NP_567526.4 UniGene:At.19726 PRIDE:Q93ZA8
            EnsemblPlants:AT4G17250.1 GeneID:827439 KEGG:ath:AT4G17250
            TAIR:At4g17250 eggNOG:NOG278738 HOGENOM:HOG000090500 OMA:GELANSR
            PhylomeDB:Q93ZA8 ProtClustDB:CLSN2686389 Genevestigator:Q93ZA8
            Uniprot:Q93ZA8
        Length = 741

 Score = 395 (144.1 bits), Expect = 3.6e-54, Sum P(2) = 3.6e-54
 Identities = 91/171 (53%), Positives = 114/171 (66%)

Query:     6 CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-LV----------PIKYFSLNA 54
             C + GNL++ +FS+P       VY AAASL C V M S L+          P K+FSLNA
Sbjct:     3 CDSHGNLSDTEFSKPLPSIG--VYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNA 60

Query:    55 TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
             T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN+ 
Sbjct:    61 TTLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLT 120

Query:   115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFXXXXXXXXXXXY-FSALTVP 164
             ALGILV T +VNIC QLGTG I+VF +EHA              FSA+TVP
Sbjct:   121 ALGILVITDVVNICIQLGTGAIYVFPQEHALVIILMLLMFMILSFSAITVP 171

 Score = 197 (74.4 bits), Expect = 3.6e-54, Sum P(2) = 3.6e-54
 Identities = 49/147 (33%), Positives = 82/147 (55%)

Query:   213 ELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLI 272
             ELVDI  K   ++ +K   +  K +P H    +K           A+NS+Y++SQT+L+ 
Sbjct:   577 ELVDIAQKEFTESWEKNRILCMKHKPSHWP--IKTQ---------AANSMYRISQTLLMK 625

Query:   273 HQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGK 332
             ++SRN +T E L   +  M SDI+  C  N   V+ + CL + ++ RE  +R      G+
Sbjct:   626 YESRNIETEETLLKDVEKMVSDIVSGCFCNTAQVIGMKCLVTAVEVREASVREAAMHLGR 685

Query:   333 SETILKILDQRGIPKITQSKTLSKYDE 359
             +E IL+I+D+R +P ++  K ++K DE
Sbjct:   686 TEKILEIVDRRCMPALSHHK-VAKIDE 711

 Score = 144 (55.7 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
 Identities = 28/56 (50%), Positives = 44/56 (78%)

Query:   203 RFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSN--SQGFKGV 256
             +FVLH+EGE E+VD + +SN+ ATD  +Q G+KKQP +L++LL+ +   S+GF+G+
Sbjct:   411 QFVLHLEGEEEMVDYMARSNRVATDHLIQKGRKKQPVNLIELLEATTFISKGFEGI 466


>TAIR|locus:2169018 [details] [associations]
            symbol:ASG7 "AT5G47580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0006487 "protein N-linked glycosylation"
            evidence=RCA] GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB025628 eggNOG:NOG278738 HOGENOM:HOG000090500
            ProtClustDB:CLSN2686389 EMBL:AY060580 EMBL:AY149943 IPI:IPI00535034
            RefSeq:NP_199569.1 UniGene:At.27437 EnsemblPlants:AT5G47580.1
            GeneID:834808 KEGG:ath:AT5G47580 TAIR:At5g47580 InParanoid:Q9FGJ9
            OMA:IRWFTAV PhylomeDB:Q9FGJ9 Genevestigator:Q9FGJ9 Uniprot:Q9FGJ9
        Length = 748

 Score = 402 (146.6 bits), Expect = 4.6e-54, Sum P(2) = 4.6e-54
 Identities = 92/176 (52%), Positives = 114/176 (64%)

Query:     1 MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-LV----------PIKY 49
             MG L C   G+LN+ +FS+P       +Y A ASL C + MA+ L+          P K+
Sbjct:     1 MGILGCDAHGDLNDAEFSKPLPSIG--IYVAVASLICGLAMAADLIHGFRHRKFWFPCKF 58

Query:    50 FSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKEL 109
             FSLNATS T IAV IK S+DLNT MP +QD+L KLSS VF+CTVMGN+MPSLG ++  +L
Sbjct:    59 FSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDL 118

Query:   110 LMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFXXXXXXXXXXXY-FSALTVP 164
             LMN++ALGILV T +VNIC QLGTG I+VF +EH               FSA TVP
Sbjct:   119 LMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVP 174

 Score = 189 (71.6 bits), Expect = 4.6e-54, Sum P(2) = 4.6e-54
 Identities = 44/144 (30%), Positives = 82/144 (56%)

Query:   220 KSNQDATDKWMQMGQKKQPE----HLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQS 275
             ++ ++   + M++ +K+  E    +L+  +K   S      LA+NS+Y++ QTILL ++S
Sbjct:   575 RNPEETLRELMEIAKKEFSESWQMNLMVCMKHKPSHWPIKTLAANSMYRICQTILLTYES 634

Query:   276 RNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSET 335
             R+  T E L   +    SDI+  C  N+  V+ + CL S ++ RE+ +R      G++E 
Sbjct:   635 RDYGTGEALLRKLESTISDIVSGCFCNVAQVISVKCLVSAVEVREESVRGAALHLGRTEK 694

Query:   336 ILKILDQRGIPKIT--QSKTLSKY 357
             IL+IL++R +PK+   Q K + ++
Sbjct:   695 ILEILERRRLPKLRCDQMKNIDEW 718

 Score = 175 (66.7 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
 Identities = 48/133 (36%), Positives = 80/133 (60%)

Query:   200 DISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSN--SQGFKGVL 257
             D++ FVLH+EGE+ LVD++++SN++ATD W++ G+KKQP +L++LL+ +   S+GF+G+ 
Sbjct:   415 DLASFVLHLEGEDPLVDVMVRSNREATDHWIEKGRKKQPVNLIELLEATTPISKGFEGIA 474

Query:   258 ASNSIYKVSQTILLIHQSRNNQTTERLFAV--IAVMTSDIICACLTNLPHVMCLNCLSST 315
               +S  KV+    L H    N     L  +  IAV   DI  + L  L     LN ++  
Sbjct:   475 EFDS-NKVAS---LAHGEPPNCWALPLVTLTSIAVALPDIKPSSLKKL-----LNAVNEA 525

Query:   316 LD--QREDCMRNT 326
             L+   + +C+ +T
Sbjct:   526 LEYVNKFECVLDT 538


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.134   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      363       323   0.00086  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  212 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.92u 0.18s 25.10t   Elapsed:  00:00:02
  Total cpu time:  24.92u 0.18s 25.10t   Elapsed:  00:00:02
  Start:  Fri May 10 07:51:15 2013   End:  Fri May 10 07:51:17 2013

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