Query 043556
Match_columns 166
No_of_seqs 124 out of 1104
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:20:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.9 1.5E-26 5E-31 187.6 13.7 149 3-154 13-164 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 1.7E-25 5.7E-30 182.7 14.1 158 1-158 6-169 (482)
3 2acv_A Triterpene UDP-glucosyl 99.9 3E-22 1E-26 162.8 15.2 143 3-152 9-159 (463)
4 2vch_A Hydroquinone glucosyltr 99.9 4.3E-22 1.5E-26 162.6 14.7 146 3-153 6-156 (480)
5 2c1x_A UDP-glucose flavonoid 3 99.9 1.7E-21 5.9E-26 158.1 14.0 148 2-151 6-156 (456)
6 2iya_A OLEI, oleandomycin glyc 99.8 1E-19 3.5E-24 145.5 14.1 127 1-139 10-141 (424)
7 4amg_A Snogd; transferase, pol 99.7 1.1E-17 3.8E-22 132.2 11.8 126 2-140 21-161 (400)
8 3ia7_A CALG4; glycosysltransfe 99.7 6.3E-17 2.1E-21 127.7 12.8 125 1-137 2-133 (402)
9 1iir_A Glycosyltransferase GTF 99.7 2.4E-16 8.2E-21 125.9 12.7 122 4-138 1-127 (415)
10 2iyf_A OLED, oleandomycin glyc 99.7 2.9E-16 1E-20 125.4 12.8 127 1-139 5-136 (430)
11 3rsc_A CALG2; TDP, enediyne, s 99.6 7.2E-16 2.5E-20 122.6 10.9 124 3-138 20-150 (415)
12 1rrv_A Glycosyltransferase GTF 99.6 1.9E-15 6.7E-20 120.5 10.7 122 4-138 1-128 (416)
13 2yjn_A ERYCIII, glycosyltransf 99.6 5.4E-15 1.8E-19 118.9 11.7 125 2-138 19-175 (441)
14 2p6p_A Glycosyl transferase; X 99.5 8E-14 2.7E-18 109.7 13.4 123 4-138 1-138 (384)
15 3oti_A CALG3; calicheamicin, T 99.5 5.3E-14 1.8E-18 111.4 12.3 119 3-137 20-160 (398)
16 3h4t_A Glycosyltransferase GTF 99.5 2.1E-14 7.4E-19 114.3 7.2 122 4-139 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.5 9.8E-14 3.3E-18 109.8 9.4 124 3-138 15-154 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.5 4.1E-13 1.4E-17 105.8 10.6 124 3-138 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.4 3E-12 1E-16 101.3 10.2 124 3-138 20-161 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.1 2.7E-10 9.1E-15 89.7 10.5 114 2-134 1-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.6 4.3E-07 1.5E-11 70.3 11.3 120 1-136 2-127 (364)
22 3c48_A Predicted glycosyltrans 97.4 0.0015 5E-08 51.5 10.3 123 3-138 20-155 (438)
23 3fro_A GLGA glycogen synthase; 97.4 0.0021 7E-08 50.3 11.1 134 2-137 1-154 (439)
24 2r60_A Glycosyl transferase, g 97.2 0.0027 9.1E-08 51.2 10.4 126 3-137 7-152 (499)
25 3okp_A GDP-mannose-dependent a 96.8 0.0066 2.2E-07 46.8 8.4 107 1-133 2-114 (394)
26 2jjm_A Glycosyl transferase, g 96.3 0.073 2.5E-06 41.1 11.8 113 3-137 15-134 (394)
27 1v4v_A UDP-N-acetylglucosamine 96.2 0.079 2.7E-06 40.7 11.6 113 4-136 6-123 (376)
28 2gek_A Phosphatidylinositol ma 96.0 0.034 1.2E-06 43.0 8.4 40 3-42 20-63 (406)
29 2iuy_A Avigt4, glycosyltransfe 95.8 0.011 3.9E-07 44.8 5.0 41 1-41 1-57 (342)
30 3beo_A UDP-N-acetylglucosamine 95.6 0.093 3.2E-06 40.1 9.6 38 3-41 8-47 (375)
31 1vgv_A UDP-N-acetylglucosamine 95.6 0.069 2.4E-06 41.0 8.7 110 4-136 1-118 (384)
32 3dzc_A UDP-N-acetylglucosamine 95.5 0.074 2.5E-06 41.8 8.8 112 1-135 23-142 (396)
33 3ot5_A UDP-N-acetylglucosamine 95.4 0.065 2.2E-06 42.3 8.0 112 1-135 25-145 (403)
34 2x6q_A Trehalose-synthase TRET 94.7 0.055 1.9E-06 42.1 5.9 42 1-42 38-81 (416)
35 1psw_A ADP-heptose LPS heptosy 94.4 0.37 1.3E-05 36.6 9.9 101 4-132 1-105 (348)
36 1ccw_A Protein (glutamate muta 94.3 0.11 3.7E-06 34.8 5.9 45 1-45 1-45 (137)
37 3s28_A Sucrose synthase 1; gly 94.0 0.094 3.2E-06 45.4 6.2 126 3-136 278-438 (816)
38 2yxb_A Coenzyme B12-dependent 93.4 1.2 4.2E-05 30.4 10.4 40 3-42 18-57 (161)
39 2x0d_A WSAF; GT4 family, trans 92.7 0.059 2E-06 42.7 2.6 39 3-41 46-89 (413)
40 2iw1_A Lipopolysaccharide core 92.6 0.11 3.6E-06 39.6 4.0 38 4-41 1-41 (374)
41 3vue_A GBSS-I, granule-bound s 92.1 0.21 7.1E-06 41.0 5.3 38 3-40 9-52 (536)
42 1g5t_A COB(I)alamin adenosyltr 91.5 2.8 9.4E-05 29.8 11.2 99 3-118 28-131 (196)
43 3hbm_A UDP-sugar hydrolase; PS 91.3 0.34 1.1E-05 36.5 5.3 91 5-134 2-99 (282)
44 1rzu_A Glycogen synthase 1; gl 91.2 0.22 7.5E-06 39.6 4.4 38 4-41 1-44 (485)
45 2hy7_A Glucuronosyltransferase 91.2 1.5 5.1E-05 34.3 9.2 36 3-40 14-52 (406)
46 2qzs_A Glycogen synthase; glyc 90.9 0.26 8.9E-06 39.2 4.6 38 4-41 1-44 (485)
47 3tov_A Glycosyl transferase fa 90.6 1.8 6.3E-05 33.2 9.0 104 3-133 8-115 (349)
48 4hwg_A UDP-N-acetylglucosamine 89.8 1.5 5E-05 34.3 8.0 107 10-136 15-125 (385)
49 3zqu_A Probable aromatic acid 88.8 1 3.4E-05 32.4 5.8 46 1-47 1-47 (209)
50 1y80_A Predicted cobalamin bin 88.6 1.1 3.7E-05 31.9 5.9 43 3-45 88-130 (210)
51 3bfv_A CAPA1, CAPB2, membrane 88.0 6.5 0.00022 29.0 10.3 40 3-42 81-122 (271)
52 2i2x_B MTAC, methyltransferase 87.4 1.4 4.8E-05 32.5 6.1 38 3-40 123-160 (258)
53 1id1_A Putative potassium chan 87.1 0.43 1.5E-05 31.9 2.9 35 1-40 1-35 (153)
54 3qjg_A Epidermin biosynthesis 86.5 1.2 4.2E-05 31.0 5.0 42 3-45 5-46 (175)
55 3ezx_A MMCP 1, monomethylamine 86.0 2 6.8E-05 30.9 6.1 43 3-45 92-134 (215)
56 3cio_A ETK, tyrosine-protein k 85.8 8.4 0.00029 28.8 9.8 38 4-41 104-143 (299)
57 1mvl_A PPC decarboxylase athal 83.9 1.9 6.6E-05 30.9 5.1 42 3-46 19-60 (209)
58 1sbz_A Probable aromatic acid 83.9 2 6.7E-05 30.6 5.1 43 4-47 1-44 (197)
59 3lqk_A Dipicolinate synthase s 83.2 1.8 6E-05 30.9 4.6 40 3-43 7-47 (201)
60 2ejb_A Probable aromatic acid 82.2 3.9 0.00013 28.8 6.1 44 4-48 2-45 (189)
61 3mcu_A Dipicolinate synthase, 81.9 1.9 6.5E-05 30.9 4.4 41 2-43 4-45 (207)
62 3la6_A Tyrosine-protein kinase 81.6 14 0.00048 27.4 9.6 39 4-42 92-132 (286)
63 1g63_A Epidermin modifying enz 81.6 1.9 6.5E-05 30.2 4.3 42 4-46 3-44 (181)
64 4dzz_A Plasmid partitioning pr 80.8 11 0.00038 25.7 9.4 32 11-42 10-41 (206)
65 3qxc_A Dethiobiotin synthetase 80.5 13 0.00044 27.1 8.6 36 3-38 20-57 (242)
66 2yvq_A Carbamoyl-phosphate syn 80.0 5.1 0.00017 26.7 5.8 91 15-135 34-132 (143)
67 2lpm_A Two-component response 79.9 1.7 5.8E-05 28.3 3.3 40 93-135 42-86 (123)
68 2vo1_A CTP synthase 1; pyrimid 79.3 3.1 0.00011 31.2 4.9 42 1-42 20-64 (295)
69 3to5_A CHEY homolog; alpha(5)b 79.1 3 0.0001 27.4 4.4 33 106-138 56-97 (134)
70 1p3y_1 MRSD protein; flavoprot 78.5 1.4 5E-05 31.2 2.8 42 3-45 8-49 (194)
71 1qzu_A Hypothetical protein MD 78.2 2.5 8.7E-05 30.2 4.1 43 3-46 19-62 (206)
72 2gt1_A Lipopolysaccharide hept 78.0 2.6 9E-05 31.6 4.4 44 4-47 1-46 (326)
73 2q5c_A NTRC family transcripti 77.0 2.8 9.7E-05 29.6 4.0 44 91-140 129-172 (196)
74 1e2b_A Enzyme IIB-cellobiose; 75.4 6.2 0.00021 24.9 5.0 40 1-40 1-40 (106)
75 3gl9_A Response regulator; bet 74.8 6.2 0.00021 24.5 5.0 42 94-138 36-86 (122)
76 3ghy_A Ketopantoate reductase 74.5 2.9 0.0001 31.7 3.8 41 1-46 1-41 (335)
77 3gpi_A NAD-dependent epimerase 74.3 5.1 0.00017 29.2 5.0 35 1-40 1-35 (286)
78 3bul_A Methionine synthase; tr 72.0 7.3 0.00025 32.3 5.8 41 3-43 98-138 (579)
79 3kkl_A Probable chaperone prot 71.9 10 0.00035 27.6 6.1 41 1-41 1-52 (244)
80 2xj4_A MIPZ; replication, cell 71.6 5.8 0.0002 29.3 4.8 41 1-41 1-43 (286)
81 1kjn_A MTH0777; hypotethical p 70.5 5.8 0.0002 26.9 4.0 36 13-48 18-53 (157)
82 2r8r_A Sensor protein; KDPD, P 69.8 8.4 0.00029 28.0 5.1 39 3-41 6-44 (228)
83 3zzm_A Bifunctional purine bio 69.6 10 0.00035 31.0 5.9 94 4-116 10-111 (523)
84 3vot_A L-amino acid ligase, BL 69.4 15 0.00052 28.6 7.0 26 106-131 74-101 (425)
85 3hn2_A 2-dehydropantoate 2-red 69.3 8.6 0.0003 28.8 5.4 39 3-47 2-40 (312)
86 2pju_A Propionate catabolism o 69.3 8.8 0.0003 27.7 5.1 40 91-136 141-180 (225)
87 3i83_A 2-dehydropantoate 2-red 68.7 8.1 0.00028 29.1 5.1 40 3-48 2-41 (320)
88 1bg6_A N-(1-D-carboxylethyl)-L 68.6 3.9 0.00013 31.0 3.3 35 1-40 2-36 (359)
89 3t6k_A Response regulator rece 68.3 11 0.00038 23.8 5.2 33 106-138 47-88 (136)
90 2r85_A PURP protein PF1517; AT 68.1 6.6 0.00023 29.3 4.5 35 2-42 1-35 (334)
91 3m6m_D Sensory/regulatory prot 67.0 8.5 0.00029 24.7 4.4 32 106-137 57-99 (143)
92 4b4o_A Epimerase family protei 66.5 4.3 0.00015 29.9 3.1 32 4-39 1-32 (298)
93 4hb9_A Similarities with proba 66.4 4.5 0.00016 30.8 3.3 29 4-37 2-30 (412)
94 3oy2_A Glycosyltransferase B73 65.4 7 0.00024 29.9 4.2 37 4-41 1-40 (413)
95 2xw6_A MGS, methylglyoxal synt 64.2 20 0.00068 23.7 5.7 94 15-141 13-118 (134)
96 3qvl_A Putative hydantoin race 63.9 28 0.00095 25.3 7.0 29 106-134 68-97 (245)
97 4gi5_A Quinone reductase; prot 63.6 16 0.00056 27.2 5.8 38 1-38 20-60 (280)
98 1lss_A TRK system potassium up 63.3 12 0.00041 23.7 4.5 33 3-40 4-36 (140)
99 1b93_A Protein (methylglyoxal 63.2 24 0.00081 23.9 6.0 90 16-138 22-123 (152)
100 3f6p_A Transcriptional regulat 62.9 16 0.00055 22.3 5.0 42 94-138 36-83 (120)
101 3kkj_A Amine oxidase, flavin-c 62.3 4.9 0.00017 27.9 2.6 17 21-37 15-31 (336)
102 2gk4_A Conserved hypothetical 61.8 7.5 0.00026 28.3 3.5 20 21-40 33-52 (232)
103 2ew2_A 2-dehydropantoate 2-red 61.7 6.1 0.00021 29.2 3.2 34 2-40 2-35 (316)
104 1hdo_A Biliverdin IX beta redu 61.5 22 0.00077 23.9 6.0 36 1-40 1-36 (206)
105 2vqe_B 30S ribosomal protein S 61.2 3.3 0.00011 30.7 1.5 34 106-139 157-192 (256)
106 3ty2_A 5'-nucleotidase SURE; s 60.8 14 0.00047 27.4 4.8 41 3-45 11-51 (261)
107 4e3z_A Putative oxidoreductase 60.8 17 0.00057 26.3 5.4 37 1-40 23-59 (272)
108 1vi6_A 30S ribosomal protein S 60.7 3.1 0.00011 29.8 1.3 33 107-139 115-149 (208)
109 1rw7_A YDR533CP; alpha-beta sa 60.7 26 0.0009 25.1 6.4 41 1-41 1-52 (243)
110 3ug7_A Arsenical pump-driving 60.5 53 0.0018 24.9 9.9 37 5-41 27-64 (349)
111 1dhr_A Dihydropteridine reduct 60.4 12 0.00041 26.6 4.4 34 3-39 6-39 (241)
112 3sju_A Keto reductase; short-c 60.3 11 0.00038 27.6 4.4 37 1-40 21-57 (279)
113 4g6h_A Rotenone-insensitive NA 60.2 4.6 0.00016 32.6 2.4 34 3-41 42-75 (502)
114 3p9x_A Phosphoribosylglycinami 59.4 19 0.00063 25.8 5.2 48 91-138 14-62 (211)
115 1eg2_A Modification methylase 59.1 14 0.00048 28.0 4.8 58 107-164 241-300 (319)
116 3bch_A 40S ribosomal protein S 59.0 3.5 0.00012 30.5 1.3 32 107-138 151-184 (253)
117 3kjh_A CO dehydrogenase/acetyl 58.3 7.4 0.00025 27.5 3.0 37 5-41 2-38 (254)
118 3mc3_A DSRE/DSRF-like family p 58.1 23 0.00079 23.0 5.2 42 4-45 16-60 (134)
119 2a5l_A Trp repressor binding p 57.4 21 0.00072 24.3 5.2 41 1-41 3-44 (200)
120 3dqz_A Alpha-hydroxynitrIle ly 57.1 8.7 0.0003 26.6 3.2 38 1-39 1-39 (258)
121 2bi7_A UDP-galactopyranose mut 56.8 8.3 0.00029 29.8 3.3 35 1-40 1-35 (384)
122 3oid_A Enoyl-[acyl-carrier-pro 56.7 16 0.00054 26.4 4.6 37 1-40 1-37 (258)
123 3lyu_A Putative hydrogenase; t 56.1 13 0.00043 24.5 3.7 34 4-40 19-52 (142)
124 3c3m_A Response regulator rece 56.1 24 0.00083 22.1 5.1 32 106-137 46-86 (138)
125 2bw0_A 10-FTHFDH, 10-formyltet 55.8 42 0.0014 25.5 7.0 34 1-39 20-53 (329)
126 3nva_A CTP synthase; rossman f 55.8 20 0.00068 29.4 5.3 40 3-42 2-44 (535)
127 1vmd_A MGS, methylglyoxal synt 55.7 32 0.0011 23.9 5.7 92 16-140 38-141 (178)
128 2g1u_A Hypothetical protein TM 55.6 17 0.00059 23.8 4.3 34 3-41 19-52 (155)
129 4gbj_A 6-phosphogluconate dehy 55.4 14 0.00047 27.6 4.2 30 4-38 6-35 (297)
130 3gt7_A Sensor protein; structu 55.4 23 0.0008 22.8 5.0 41 94-137 41-90 (154)
131 1ehi_A LMDDL2, D-alanine:D-lac 55.4 12 0.0004 28.9 3.9 39 1-39 1-44 (377)
132 1dbw_A Transcriptional regulat 55.0 29 0.00098 21.2 5.2 42 94-138 37-85 (126)
133 3bbn_B Ribosomal protein S2; s 54.8 3 0.0001 30.4 0.4 34 107-140 157-192 (231)
134 3eag_A UDP-N-acetylmuramate:L- 54.5 16 0.00053 27.6 4.4 32 4-39 5-36 (326)
135 1jx7_A Hypothetical protein YC 54.3 19 0.00064 22.3 4.2 32 15-46 16-49 (117)
136 2zkq_b 40S ribosomal protein S 54.3 4.5 0.00015 30.6 1.2 32 107-138 118-151 (295)
137 3osu_A 3-oxoacyl-[acyl-carrier 54.2 23 0.0008 25.1 5.1 37 1-40 1-37 (246)
138 2pn1_A Carbamoylphosphate synt 53.8 23 0.00077 26.3 5.2 34 1-40 2-37 (331)
139 3o26_A Salutaridine reductase; 53.8 18 0.00063 26.3 4.7 35 3-40 11-45 (311)
140 3dhn_A NAD-dependent epimerase 53.7 12 0.00043 25.9 3.5 36 1-40 1-37 (227)
141 1pq4_A Periplasmic binding pro 53.7 32 0.0011 25.6 5.9 52 91-145 224-277 (291)
142 3hwr_A 2-dehydropantoate 2-red 53.6 16 0.00055 27.4 4.3 40 3-47 19-58 (318)
143 3grc_A Sensor protein, kinase; 53.5 32 0.0011 21.4 5.3 42 94-138 40-90 (140)
144 4dll_A 2-hydroxy-3-oxopropiona 53.3 21 0.00072 26.7 5.0 33 3-40 31-63 (320)
145 1p9o_A Phosphopantothenoylcyst 53.2 9.1 0.00031 29.2 2.8 22 21-42 69-90 (313)
146 2vsy_A XCC0866; transferase, g 52.8 20 0.00069 28.7 5.0 38 3-40 205-246 (568)
147 1mio_A Nitrogenase molybdenum 52.1 75 0.0026 25.9 8.3 97 20-132 347-478 (533)
148 2x5n_A SPRPN10, 26S proteasome 52.0 31 0.0011 23.9 5.3 35 6-40 110-144 (192)
149 1xrs_B D-lysine 5,6-aminomutas 52.0 13 0.00044 27.6 3.4 44 3-46 120-172 (262)
150 4e12_A Diketoreductase; oxidor 51.8 13 0.00046 27.3 3.6 35 1-40 2-36 (283)
151 1ooe_A Dihydropteridine reduct 51.5 22 0.00076 25.0 4.6 33 4-39 3-35 (236)
152 2fb6_A Conserved hypothetical 51.5 17 0.0006 23.2 3.6 42 3-44 7-52 (117)
153 3r8n_B 30S ribosomal protein S 51.4 3.2 0.00011 30.0 0.0 43 107-149 149-193 (218)
154 3icc_A Putative 3-oxoacyl-(acy 51.4 33 0.0011 24.2 5.6 35 3-40 6-40 (255)
155 2qzj_A Two-component response 51.4 32 0.0011 21.5 5.0 33 106-138 47-85 (136)
156 3hv2_A Response regulator/HD d 51.4 32 0.0011 21.9 5.1 42 94-138 48-96 (153)
157 2vrn_A Protease I, DR1199; cys 51.4 53 0.0018 22.2 6.5 40 1-41 7-46 (190)
158 3l6e_A Oxidoreductase, short-c 51.2 21 0.00072 25.3 4.5 34 4-40 3-36 (235)
159 3j20_B 30S ribosomal protein S 51.1 4.8 0.00016 28.7 0.9 32 107-138 111-144 (202)
160 3nhm_A Response regulator; pro 51.1 38 0.0013 20.7 5.3 33 106-138 46-87 (133)
161 3sbx_A Putative uncharacterize 51.0 33 0.0011 24.0 5.3 35 3-40 13-51 (189)
162 4fu0_A D-alanine--D-alanine li 51.0 10 0.00035 29.0 2.9 37 1-38 1-42 (357)
163 3l77_A Short-chain alcohol deh 50.9 23 0.00078 24.8 4.6 34 4-40 2-35 (235)
164 2rjn_A Response regulator rece 50.9 33 0.0011 21.9 5.1 43 94-139 41-90 (154)
165 1iow_A DD-ligase, DDLB, D-ALA\ 50.9 34 0.0012 24.9 5.7 40 2-41 1-44 (306)
166 3tqr_A Phosphoribosylglycinami 50.8 27 0.00092 24.9 4.9 46 92-137 18-63 (215)
167 3pdi_B Nitrogenase MOFE cofact 50.7 16 0.00056 29.2 4.1 35 92-135 366-400 (458)
168 3b2n_A Uncharacterized protein 50.6 28 0.00095 21.6 4.6 33 106-138 48-87 (133)
169 3ego_A Probable 2-dehydropanto 50.5 9.3 0.00032 28.6 2.5 33 3-41 2-34 (307)
170 2qr3_A Two-component system re 50.3 34 0.0012 21.1 5.1 33 106-138 46-90 (140)
171 1z82_A Glycerol-3-phosphate de 50.3 13 0.00043 28.1 3.3 33 3-40 14-46 (335)
172 2xzm_B RPS0E; ribosome, transl 50.1 3.8 0.00013 30.1 0.3 32 106-137 113-146 (241)
173 1tmy_A CHEY protein, TMY; chem 49.9 31 0.0011 20.7 4.7 33 106-138 46-85 (120)
174 4huj_A Uncharacterized protein 49.8 7.5 0.00026 27.5 1.8 35 1-40 21-55 (220)
175 3rqi_A Response regulator prot 49.7 23 0.00079 23.7 4.3 43 93-138 40-89 (184)
176 3cg0_A Response regulator rece 49.6 27 0.00092 21.7 4.4 43 94-139 44-93 (140)
177 4e7p_A Response regulator; DNA 49.6 37 0.0012 21.5 5.2 43 93-138 55-104 (150)
178 3cu5_A Two component transcrip 49.6 36 0.0012 21.4 5.1 32 106-137 48-86 (141)
179 2qxy_A Response regulator; reg 49.4 34 0.0012 21.3 4.9 41 94-138 38-85 (142)
180 4hn9_A Iron complex transport 49.0 28 0.00097 26.1 5.1 33 106-138 115-147 (335)
181 3enk_A UDP-glucose 4-epimerase 48.9 23 0.0008 26.2 4.6 36 1-39 2-37 (341)
182 3tfo_A Putative 3-oxoacyl-(acy 48.8 30 0.001 25.0 5.1 37 1-40 1-37 (264)
183 2ixd_A LMBE-related protein; h 48.6 20 0.00067 26.0 4.0 37 1-38 1-38 (242)
184 2etv_A Iron(III) ABC transport 48.4 25 0.00084 26.7 4.7 30 107-136 96-126 (346)
185 3fwy_A Light-independent proto 48.4 28 0.00096 26.2 4.9 39 3-41 47-86 (314)
186 2nwq_A Probable short-chain de 48.3 25 0.00086 25.6 4.6 33 5-40 22-54 (272)
187 2l2q_A PTS system, cellobiose- 48.3 28 0.00096 21.7 4.2 36 3-38 4-39 (109)
188 4iin_A 3-ketoacyl-acyl carrier 48.2 31 0.0011 24.8 5.1 34 4-40 29-62 (271)
189 3h1g_A Chemotaxis protein CHEY 48.1 45 0.0016 20.4 5.4 33 106-138 50-91 (129)
190 1srr_A SPO0F, sporulation resp 48.1 31 0.0011 20.9 4.5 33 106-138 46-85 (124)
191 2i87_A D-alanine-D-alanine lig 48.1 11 0.00037 28.9 2.6 39 1-39 1-43 (364)
192 3crn_A Response regulator rece 48.0 43 0.0015 20.6 5.2 33 106-138 46-85 (132)
193 1u7z_A Coenzyme A biosynthesis 48.0 18 0.0006 26.2 3.5 19 21-39 38-56 (226)
194 3f67_A Putative dienelactone h 47.9 34 0.0012 23.3 5.1 35 5-39 33-67 (241)
195 3zv4_A CIS-2,3-dihydrobiphenyl 47.8 29 0.001 25.2 4.9 35 3-40 4-38 (281)
196 4ds3_A Phosphoribosylglycinami 47.6 29 0.001 24.6 4.6 47 91-137 19-66 (209)
197 1e4e_A Vancomycin/teicoplanin 47.6 15 0.0005 27.8 3.2 38 1-39 1-43 (343)
198 1zgz_A Torcad operon transcrip 47.5 43 0.0015 20.1 5.1 33 106-138 45-83 (122)
199 1pno_A NAD(P) transhydrogenase 47.5 26 0.00087 24.3 4.0 38 4-41 24-64 (180)
200 4e21_A 6-phosphogluconate dehy 47.5 12 0.0004 29.0 2.7 35 1-40 20-54 (358)
201 1xhf_A DYE resistance, aerobic 47.3 44 0.0015 20.1 5.3 33 106-138 46-84 (123)
202 3ew7_A LMO0794 protein; Q8Y8U8 47.3 15 0.00051 25.2 3.1 21 21-41 14-34 (221)
203 2a9o_A Response regulator; ess 47.2 36 0.0012 20.3 4.7 34 106-139 44-83 (120)
204 2c5m_A CTP synthase; cytidine 47.1 18 0.00061 27.0 3.4 39 3-41 22-63 (294)
205 3a10_A Response regulator; pho 46.8 44 0.0015 19.8 5.4 32 106-137 44-82 (116)
206 3alj_A 2-methyl-3-hydroxypyrid 46.7 16 0.00053 27.9 3.3 32 3-39 11-42 (379)
207 2a33_A Hypothetical protein; s 46.7 39 0.0013 24.1 5.2 32 4-35 14-49 (215)
208 3kht_A Response regulator; PSI 46.7 51 0.0017 20.6 5.5 42 93-137 40-90 (144)
209 2ts1_A Tyrosyl-tRNA synthetase 46.7 20 0.00069 28.4 4.0 33 7-40 36-71 (419)
210 1p6q_A CHEY2; chemotaxis, sign 46.7 42 0.0014 20.4 5.0 41 94-137 41-90 (129)
211 3q0i_A Methionyl-tRNA formyltr 46.6 42 0.0014 25.4 5.7 35 1-40 5-39 (318)
212 1uls_A Putative 3-oxoacyl-acyl 46.6 32 0.0011 24.4 4.9 34 4-40 5-38 (245)
213 1rcu_A Conserved hypothetical 46.6 40 0.0014 23.7 5.2 34 3-36 23-63 (195)
214 1d4o_A NADP(H) transhydrogenas 46.5 27 0.00092 24.2 4.0 37 4-40 23-62 (184)
215 3u5c_A 40S ribosomal protein S 46.4 6.6 0.00023 29.0 1.1 33 107-139 117-151 (252)
216 3eod_A Protein HNR; response r 46.4 34 0.0011 21.0 4.5 42 94-138 41-89 (130)
217 3e8x_A Putative NAD-dependent 46.3 16 0.00053 25.7 3.1 21 21-41 35-55 (236)
218 3sc4_A Short chain dehydrogena 46.2 28 0.00094 25.5 4.5 35 3-40 8-42 (285)
219 2iz1_A 6-phosphogluconate dehy 46.1 12 0.0004 30.1 2.6 35 1-40 3-37 (474)
220 1meo_A Phosophoribosylglycinam 46.1 39 0.0013 23.9 5.1 46 92-137 13-59 (209)
221 3lte_A Response regulator; str 46.0 49 0.0017 20.2 5.3 32 106-137 49-88 (132)
222 3m1a_A Putative dehydrogenase; 46.0 32 0.0011 24.8 4.8 35 3-40 4-38 (281)
223 1y42_X Tyrosyl-tRNA synthetase 46.0 15 0.00051 28.9 3.1 26 14-40 80-105 (392)
224 4as2_A Phosphorylcholine phosp 45.9 19 0.00065 27.4 3.6 25 17-41 145-169 (327)
225 1tvm_A PTS system, galactitol- 45.8 43 0.0015 21.0 4.9 36 3-38 21-57 (113)
226 2rdm_A Response regulator rece 45.8 47 0.0016 20.2 5.1 42 94-138 39-89 (132)
227 4h15_A Short chain alcohol deh 45.8 34 0.0012 24.9 4.9 34 3-39 10-43 (261)
228 2fsv_C NAD(P) transhydrogenase 45.3 28 0.00095 24.6 4.0 38 4-41 47-87 (203)
229 3iz6_A 40S ribosomal protein S 45.2 9.6 0.00033 28.9 1.8 33 107-139 122-156 (305)
230 3ppi_A 3-hydroxyacyl-COA dehyd 45.1 35 0.0012 24.6 5.0 34 4-40 30-63 (281)
231 3h2s_A Putative NADH-flavin re 44.9 17 0.00059 25.1 3.1 20 21-40 14-33 (224)
232 3lyl_A 3-oxoacyl-(acyl-carrier 44.9 39 0.0013 23.8 5.1 35 3-40 4-38 (247)
233 1mb3_A Cell division response 44.7 35 0.0012 20.5 4.3 32 106-137 44-84 (124)
234 1wma_A Carbonyl reductase [NAD 44.7 36 0.0012 24.1 4.9 36 2-40 2-38 (276)
235 3dme_A Conserved exported prot 44.6 14 0.00047 27.6 2.7 33 3-40 4-36 (369)
236 1qyc_A Phenylcoumaran benzylic 44.5 23 0.0008 25.8 3.9 36 1-40 1-37 (308)
237 1ks9_A KPA reductase;, 2-dehyd 44.5 19 0.00066 26.1 3.4 31 5-40 2-32 (291)
238 1djl_A Transhydrogenase DIII; 44.4 29 0.001 24.6 4.0 37 4-40 46-85 (207)
239 3hyw_A Sulfide-quinone reducta 44.3 15 0.0005 28.8 2.9 35 1-41 1-37 (430)
240 1g8m_A Aicar transformylase-IM 43.9 36 0.0012 28.3 5.1 43 18-71 16-60 (593)
241 3dfu_A Uncharacterized protein 43.8 20 0.00069 26.0 3.3 33 3-40 6-38 (232)
242 1d7o_A Enoyl-[acyl-carrier pro 43.7 44 0.0015 24.3 5.4 32 4-38 8-41 (297)
243 4dqx_A Probable oxidoreductase 43.7 37 0.0013 24.7 4.9 34 4-40 27-60 (277)
244 3qiv_A Short-chain dehydrogena 43.7 38 0.0013 23.9 4.9 35 3-40 8-42 (253)
245 2l69_A Rossmann 2X3 fold prote 43.6 23 0.00078 21.9 3.0 27 16-42 86-112 (134)
246 2jk1_A HUPR, hydrogenase trans 43.6 49 0.0017 20.5 5.0 32 106-137 43-81 (139)
247 3ucx_A Short chain dehydrogena 43.6 43 0.0015 24.0 5.2 34 4-40 11-44 (264)
248 1byi_A Dethiobiotin synthase; 43.5 32 0.0011 23.8 4.3 32 6-37 4-36 (224)
249 1zi8_A Carboxymethylenebutenol 43.4 47 0.0016 22.4 5.2 33 6-38 30-62 (236)
250 3qua_A Putative uncharacterize 43.4 51 0.0017 23.2 5.3 31 3-34 22-56 (199)
251 3gi1_A LBP, laminin-binding pr 43.2 44 0.0015 24.7 5.3 42 92-136 216-259 (286)
252 2pl1_A Transcriptional regulat 43.2 51 0.0018 19.6 5.3 33 106-138 43-82 (121)
253 3g17_A Similar to 2-dehydropan 43.1 5.9 0.0002 29.4 0.4 33 3-40 2-34 (294)
254 3q9s_A DNA-binding response re 43.1 45 0.0015 23.6 5.2 43 93-138 70-118 (249)
255 2zyd_A 6-phosphogluconate dehy 43.0 12 0.0004 30.2 2.1 35 1-40 13-47 (480)
256 3dm5_A SRP54, signal recogniti 43.0 43 0.0015 26.7 5.4 40 5-44 102-141 (443)
257 3t4x_A Oxidoreductase, short c 42.8 43 0.0015 24.0 5.1 34 4-40 10-43 (267)
258 3gem_A Short chain dehydrogena 42.8 24 0.00081 25.5 3.7 34 4-40 27-60 (260)
259 1wek_A Hypothetical protein TT 42.7 33 0.0011 24.5 4.3 35 4-40 38-76 (217)
260 2ywr_A Phosphoribosylglycinami 42.7 51 0.0017 23.4 5.3 45 92-137 14-60 (216)
261 3lrx_A Putative hydrogenase; a 42.7 20 0.00067 24.0 3.0 34 4-40 24-57 (158)
262 1f0y_A HCDH, L-3-hydroxyacyl-C 42.6 18 0.0006 26.8 3.0 32 4-40 16-47 (302)
263 3gk3_A Acetoacetyl-COA reducta 42.6 35 0.0012 24.5 4.6 35 3-40 24-58 (269)
264 3qha_A Putative oxidoreductase 42.5 15 0.00053 27.2 2.6 33 3-40 15-47 (296)
265 3cfy_A Putative LUXO repressor 42.5 44 0.0015 20.8 4.6 33 106-138 47-86 (137)
266 3cf4_G Acetyl-COA decarboxylas 42.4 42 0.0014 22.6 4.7 31 106-136 35-70 (170)
267 2z1m_A GDP-D-mannose dehydrata 42.4 47 0.0016 24.4 5.4 36 1-40 1-36 (345)
268 3imf_A Short chain dehydrogena 42.4 39 0.0013 24.1 4.8 34 4-40 6-39 (257)
269 2vou_A 2,6-dihydroxypyridine h 42.4 23 0.00077 27.2 3.6 31 3-38 5-35 (397)
270 1gsa_A Glutathione synthetase; 42.3 27 0.00091 25.5 3.9 38 4-41 2-42 (316)
271 1jkx_A GART;, phosphoribosylgl 42.3 52 0.0018 23.3 5.3 46 92-137 13-59 (212)
272 3llv_A Exopolyphosphatase-rela 42.3 18 0.0006 23.2 2.6 33 4-41 7-39 (141)
273 4a9w_A Monooxygenase; baeyer-v 42.3 11 0.00037 28.0 1.7 35 1-40 1-35 (357)
274 3n0r_A Response regulator; sig 42.2 38 0.0013 24.9 4.8 41 94-137 195-242 (286)
275 1byr_A Protein (endonuclease); 42.1 60 0.0021 20.9 5.4 36 4-41 28-63 (155)
276 2gdz_A NAD+-dependent 15-hydro 42.0 55 0.0019 23.4 5.6 34 4-40 7-40 (267)
277 2g36_A Tryptophanyl-tRNA synth 42.0 13 0.00045 28.5 2.2 26 15-40 28-53 (340)
278 2hy5_A Putative sulfurtransfer 42.0 24 0.00081 22.7 3.2 30 16-45 16-46 (130)
279 4dim_A Phosphoribosylglycinami 42.0 33 0.0011 26.3 4.6 36 1-41 5-40 (403)
280 1x1t_A D(-)-3-hydroxybutyrate 42.0 42 0.0014 23.9 4.9 35 3-40 3-37 (260)
281 3noh_A Putative peptide bindin 41.9 20 0.00068 23.4 2.7 18 21-38 78-95 (139)
282 3h7a_A Short chain dehydrogena 41.9 39 0.0013 24.1 4.7 35 3-40 6-40 (252)
283 4fgs_A Probable dehydrogenase 41.9 34 0.0012 25.2 4.4 34 4-40 29-62 (273)
284 3av3_A Phosphoribosylglycinami 41.9 49 0.0017 23.4 5.1 46 93-138 17-63 (212)
285 3md9_A Hemin-binding periplasm 41.9 35 0.0012 24.3 4.4 30 106-135 58-89 (255)
286 1vco_A CTP synthetase; tetrame 41.8 33 0.0011 28.3 4.6 38 4-41 12-52 (550)
287 1evy_A Glycerol-3-phosphate de 41.8 9.3 0.00032 29.2 1.3 31 5-40 17-47 (366)
288 1jil_A Tyrrs, tyrosyl-tRNA syn 41.8 19 0.00066 28.5 3.2 25 15-40 49-73 (420)
289 1yio_A Response regulatory pro 41.8 36 0.0012 23.0 4.4 32 106-137 47-85 (208)
290 2w36_A Endonuclease V; hypoxan 41.8 9.8 0.00033 27.6 1.3 34 106-139 102-142 (225)
291 3n7t_A Macrophage binding prot 41.7 88 0.003 22.6 6.6 38 4-41 10-58 (247)
292 3gg2_A Sugar dehydrogenase, UD 41.7 20 0.00069 28.5 3.3 31 1-37 1-31 (450)
293 1jbe_A Chemotaxis protein CHEY 41.7 57 0.0019 19.7 5.1 41 94-137 39-88 (128)
294 2h78_A Hibadh, 3-hydroxyisobut 41.6 28 0.00096 25.6 4.0 33 3-40 3-35 (302)
295 1qyd_A Pinoresinol-lariciresin 41.6 28 0.00095 25.4 3.9 36 1-40 1-37 (313)
296 3obb_A Probable 3-hydroxyisobu 41.6 28 0.00096 26.0 4.0 32 4-40 4-35 (300)
297 2hmt_A YUAA protein; RCK, KTN, 41.5 14 0.00048 23.4 2.0 32 4-40 7-38 (144)
298 2qs7_A Uncharacterized protein 41.5 39 0.0013 22.2 4.3 42 5-46 9-51 (144)
299 1efp_B ETF, protein (electron 41.4 38 0.0013 24.7 4.6 30 107-136 113-148 (252)
300 3oz2_A Digeranylgeranylglycero 41.4 16 0.00055 27.4 2.6 17 21-37 17-33 (397)
301 1efv_B Electron transfer flavo 41.3 39 0.0013 24.8 4.6 30 107-136 116-151 (255)
302 3k96_A Glycerol-3-phosphate de 41.1 12 0.00041 28.8 1.9 34 3-41 29-62 (356)
303 2phj_A 5'-nucleotidase SURE; S 41.1 41 0.0014 24.7 4.6 40 4-45 2-41 (251)
304 3cky_A 2-hydroxymethyl glutara 41.0 29 0.00098 25.4 3.9 35 1-40 1-36 (301)
305 3v2h_A D-beta-hydroxybutyrate 41.0 36 0.0012 24.8 4.4 33 4-39 25-57 (281)
306 1o97_C Electron transferring f 40.8 39 0.0013 24.8 4.6 31 107-137 112-148 (264)
307 4e5v_A Putative THUA-like prot 40.8 45 0.0015 24.8 4.9 38 2-40 3-43 (281)
308 3of5_A Dethiobiotin synthetase 40.7 36 0.0012 24.2 4.3 35 4-38 4-40 (228)
309 3eul_A Possible nitrate/nitrit 40.6 45 0.0015 21.1 4.5 43 93-138 50-99 (152)
310 2dpo_A L-gulonate 3-dehydrogen 40.6 18 0.00061 27.4 2.7 34 3-41 6-39 (319)
311 2q8p_A Iron-regulated surface 40.5 46 0.0016 23.7 4.9 32 106-137 59-91 (260)
312 3da8_A Probable 5'-phosphoribo 40.4 36 0.0012 24.3 4.2 43 92-135 25-67 (215)
313 2bru_C NAD(P) transhydrogenase 40.2 28 0.00097 24.1 3.4 38 4-41 31-71 (186)
314 3doj_A AT3G25530, dehydrogenas 40.2 26 0.00088 26.1 3.6 33 3-40 21-53 (310)
315 3s55_A Putative short-chain de 40.1 41 0.0014 24.3 4.6 33 4-39 10-42 (281)
316 1weh_A Conserved hypothetical 40.0 41 0.0014 22.9 4.3 34 5-40 3-40 (171)
317 2raf_A Putative dinucleotide-b 40.0 24 0.00081 24.7 3.2 32 3-39 19-50 (209)
318 3i6i_A Putative leucoanthocyan 40.0 41 0.0014 25.1 4.7 37 1-41 8-44 (346)
319 3cz5_A Two-component response 39.9 69 0.0024 20.2 5.5 33 106-138 50-89 (153)
320 2gkg_A Response regulator homo 39.8 46 0.0016 19.9 4.3 29 106-134 48-86 (127)
321 3fwz_A Inner membrane protein 39.8 20 0.00069 23.1 2.6 35 3-42 7-41 (140)
322 1kgs_A DRRD, DNA binding respo 39.7 55 0.0019 22.3 5.1 34 106-139 45-85 (225)
323 2zki_A 199AA long hypothetical 39.7 44 0.0015 22.7 4.5 40 1-41 1-42 (199)
324 3c97_A Signal transduction his 39.6 66 0.0023 19.9 5.2 21 106-126 53-75 (140)
325 1e7w_A Pteridine reductase; di 39.6 45 0.0015 24.3 4.8 32 4-38 9-40 (291)
326 3tl3_A Short-chain type dehydr 39.5 29 0.00099 24.7 3.7 34 3-39 8-41 (257)
327 1ydh_A AT5G11950; structural g 39.5 64 0.0022 23.0 5.4 35 4-40 10-48 (216)
328 1ys7_A Transcriptional regulat 39.5 56 0.0019 22.4 5.2 32 106-137 50-88 (233)
329 1req_A Methylmalonyl-COA mutas 39.3 1.8E+02 0.0062 24.8 11.3 39 2-40 595-633 (727)
330 3iwa_A FAD-dependent pyridine 39.2 22 0.00075 28.1 3.2 36 1-41 1-38 (472)
331 3e03_A Short chain dehydrogena 39.2 49 0.0017 23.9 4.9 35 3-40 5-39 (274)
332 3auf_A Glycinamide ribonucleot 39.1 51 0.0018 23.7 4.9 46 93-138 36-82 (229)
333 1mxh_A Pteridine reductase 2; 39.1 42 0.0014 24.1 4.6 32 5-39 12-43 (276)
334 3hzh_A Chemotaxis response reg 39.1 47 0.0016 21.3 4.5 44 93-137 70-120 (157)
335 3pxx_A Carveol dehydrogenase; 39.1 40 0.0014 24.3 4.4 33 4-39 10-42 (287)
336 2ab0_A YAJL; DJ-1/THIJ superfa 39.1 92 0.0032 21.4 6.2 38 3-41 2-39 (205)
337 4eso_A Putative oxidoreductase 39.0 45 0.0015 23.8 4.6 34 4-40 8-41 (255)
338 4ezb_A Uncharacterized conserv 38.9 24 0.00082 26.5 3.2 32 4-40 25-57 (317)
339 3op4_A 3-oxoacyl-[acyl-carrier 38.9 54 0.0018 23.2 5.1 34 4-40 9-42 (248)
340 1cp2_A CP2, nitrogenase iron p 38.9 37 0.0013 24.2 4.2 36 5-40 3-38 (269)
341 3i42_A Response regulator rece 38.8 62 0.0021 19.5 4.9 37 1-41 1-37 (127)
342 2v4n_A Multifunctional protein 38.6 50 0.0017 24.3 4.8 41 4-46 2-42 (254)
343 3edm_A Short chain dehydrogena 38.6 42 0.0014 24.0 4.4 33 4-39 8-40 (259)
344 4gxt_A A conserved functionall 38.6 24 0.00082 27.5 3.2 25 17-41 223-247 (385)
345 2r7a_A Bacterial heme binding 38.4 43 0.0015 23.8 4.4 30 106-135 58-89 (256)
346 1u0t_A Inorganic polyphosphate 38.4 33 0.0011 25.7 3.9 40 1-40 1-42 (307)
347 3g0o_A 3-hydroxyisobutyrate de 38.3 20 0.00069 26.6 2.7 33 3-40 7-39 (303)
348 1jzt_A Hypothetical 27.5 kDa p 38.2 23 0.00078 25.8 2.9 34 4-40 59-94 (246)
349 3rkr_A Short chain oxidoreduct 38.1 50 0.0017 23.6 4.8 34 4-40 29-62 (262)
350 3eq2_A Probable two-component 38.1 37 0.0013 25.9 4.3 41 94-137 39-86 (394)
351 1zh2_A KDP operon transcriptio 38.0 51 0.0018 19.6 4.3 33 106-138 44-82 (121)
352 4ao6_A Esterase; hydrolase, th 37.9 29 0.00098 24.7 3.4 36 5-40 57-94 (259)
353 3dkr_A Esterase D; alpha beta 37.8 38 0.0013 22.9 4.0 35 5-39 23-57 (251)
354 3kd9_A Coenzyme A disulfide re 37.7 21 0.0007 28.0 2.8 36 1-41 1-38 (449)
355 2xdo_A TETX2 protein; tetracyc 37.6 26 0.0009 26.8 3.4 32 3-39 26-57 (398)
356 1zmt_A Haloalcohol dehalogenas 37.6 35 0.0012 24.3 3.8 31 5-38 2-32 (254)
357 3ijr_A Oxidoreductase, short c 37.6 47 0.0016 24.3 4.6 34 4-40 47-80 (291)
358 3h5i_A Response regulator/sens 37.6 73 0.0025 19.7 5.2 32 106-137 49-87 (140)
359 1a04_A Nitrate/nitrite respons 37.5 47 0.0016 22.6 4.4 32 106-137 50-88 (215)
360 3uf0_A Short-chain dehydrogena 37.5 71 0.0024 23.1 5.6 34 4-40 31-64 (273)
361 2qjw_A Uncharacterized protein 37.3 56 0.0019 20.9 4.7 36 2-37 3-39 (176)
362 3v8b_A Putative dehydrogenase, 37.3 48 0.0016 24.2 4.6 34 4-40 28-61 (283)
363 3end_A Light-independent proto 37.3 44 0.0015 24.6 4.4 37 5-41 43-79 (307)
364 3d3k_A Enhancer of mRNA-decapp 37.3 27 0.00094 25.6 3.2 34 4-40 86-121 (259)
365 3gvc_A Oxidoreductase, probabl 37.2 66 0.0023 23.3 5.4 34 4-40 29-62 (277)
366 2wqk_A 5'-nucleotidase SURE; S 37.2 51 0.0017 24.1 4.6 40 4-45 2-41 (251)
367 3kcq_A Phosphoribosylglycinami 37.2 40 0.0014 24.0 4.0 45 92-136 21-66 (215)
368 4fbl_A LIPS lipolytic enzyme; 37.1 28 0.00095 25.0 3.3 30 9-38 56-85 (281)
369 3g79_A NDP-N-acetyl-D-galactos 37.1 48 0.0016 26.7 4.8 34 3-41 18-53 (478)
370 3c6x_A Hydroxynitrilase; atomi 37.1 37 0.0013 23.9 3.9 38 1-39 1-38 (257)
371 3uve_A Carveol dehydrogenase ( 37.0 44 0.0015 24.2 4.4 32 4-38 11-42 (286)
372 3lf2_A Short chain oxidoreduct 37.0 49 0.0017 23.7 4.6 34 4-40 8-41 (265)
373 3r0j_A Possible two component 37.0 47 0.0016 23.4 4.5 42 94-138 57-105 (250)
374 2d1p_A TUSD, hypothetical UPF0 36.9 82 0.0028 20.6 5.3 40 4-43 13-56 (140)
375 3pfb_A Cinnamoyl esterase; alp 36.9 68 0.0023 22.1 5.3 35 6-40 48-84 (270)
376 2p91_A Enoyl-[acyl-carrier-pro 36.9 68 0.0023 23.2 5.4 35 4-40 21-56 (285)
377 2rcy_A Pyrroline carboxylate r 36.9 11 0.00036 27.2 0.9 34 1-39 2-39 (262)
378 2afh_E Nitrogenase iron protei 36.8 48 0.0016 24.1 4.6 36 5-40 4-39 (289)
379 3kto_A Response regulator rece 36.8 26 0.00087 21.9 2.7 33 106-138 49-90 (136)
380 1imj_A CIB, CCG1-interacting f 36.8 89 0.003 20.5 5.8 36 5-40 33-70 (210)
381 3ius_A Uncharacterized conserv 36.7 61 0.0021 23.1 5.1 34 3-41 5-38 (286)
382 4egf_A L-xylulose reductase; s 36.7 54 0.0019 23.5 4.8 34 4-40 20-53 (266)
383 1vpd_A Tartronate semialdehyde 36.6 46 0.0016 24.2 4.5 32 4-40 6-37 (299)
384 4eg0_A D-alanine--D-alanine li 36.5 59 0.002 24.0 5.1 39 3-41 13-55 (317)
385 1n2z_A Vitamin B12 transport p 36.5 62 0.0021 22.8 5.0 32 106-137 56-89 (245)
386 3ea0_A ATPase, para family; al 36.5 36 0.0012 23.8 3.7 40 3-42 3-45 (245)
387 3grp_A 3-oxoacyl-(acyl carrier 36.5 55 0.0019 23.6 4.8 34 4-40 27-60 (266)
388 2e6c_A 5'-nucleotidase SURE; S 36.4 49 0.0017 24.1 4.4 39 5-45 2-40 (244)
389 1s1m_A CTP synthase; CTP synth 36.4 45 0.0015 27.4 4.6 38 4-41 3-43 (545)
390 3ksu_A 3-oxoacyl-acyl carrier 36.4 37 0.0013 24.4 3.8 32 4-38 11-42 (262)
391 2o8n_A APOA-I binding protein; 36.4 31 0.001 25.5 3.4 34 4-40 80-115 (265)
392 3e61_A Putative transcriptiona 36.4 52 0.0018 23.3 4.6 33 106-138 63-96 (277)
393 3dqp_A Oxidoreductase YLBE; al 36.3 22 0.00074 24.6 2.5 20 21-40 14-33 (219)
394 3cgv_A Geranylgeranyl reductas 36.3 12 0.00043 28.3 1.3 35 1-40 2-36 (397)
395 3mm4_A Histidine kinase homolo 36.3 37 0.0013 23.2 3.7 33 106-138 118-161 (206)
396 2eq5_A 228AA long hypothetical 36.2 78 0.0027 22.1 5.5 29 106-134 74-103 (228)
397 4f0j_A Probable hydrolytic enz 36.2 47 0.0016 23.3 4.4 35 5-40 48-82 (315)
398 1zcz_A Bifunctional purine bio 36.2 33 0.0011 27.5 3.6 49 5-67 14-62 (464)
399 1j9j_A Stationary phase surviV 36.1 54 0.0019 23.9 4.6 40 5-46 2-41 (247)
400 3d1c_A Flavin-containing putat 36.1 19 0.00066 26.9 2.3 36 1-41 2-38 (369)
401 1qkk_A DCTD, C4-dicarboxylate 36.1 46 0.0016 21.2 4.0 34 106-139 46-86 (155)
402 2ehd_A Oxidoreductase, oxidore 35.9 31 0.001 24.1 3.3 37 1-40 1-38 (234)
403 3rih_A Short chain dehydrogena 35.9 55 0.0019 24.0 4.8 34 4-40 41-74 (293)
404 1i3c_A Response regulator RCP1 35.9 50 0.0017 20.9 4.1 33 106-138 60-101 (149)
405 3n53_A Response regulator rece 35.8 35 0.0012 21.2 3.3 32 106-137 45-85 (140)
406 2wtm_A EST1E; hydrolase; 1.60A 35.7 67 0.0023 22.2 5.1 33 6-38 29-63 (251)
407 2yxn_A Tyrosyl-tRNA synthetase 35.7 27 0.00091 26.6 3.0 25 15-40 50-74 (322)
408 3jx9_A Putative phosphoheptose 35.7 39 0.0013 23.2 3.6 24 18-41 90-114 (170)
409 3c3w_A Two component transcrip 35.6 41 0.0014 23.3 3.9 32 106-137 46-84 (225)
410 4dmm_A 3-oxoacyl-[acyl-carrier 35.5 58 0.002 23.5 4.8 33 4-39 28-60 (269)
411 3ruf_A WBGU; rossmann fold, UD 35.5 63 0.0022 23.9 5.2 34 3-40 25-58 (351)
412 2z1d_A Hydrogenase expression/ 35.4 1.3E+02 0.0045 23.4 6.7 61 91-156 182-248 (372)
413 3ek2_A Enoyl-(acyl-carrier-pro 35.4 77 0.0027 22.4 5.5 35 4-40 14-49 (271)
414 2qcu_A Aerobic glycerol-3-phos 35.3 20 0.00067 28.7 2.3 34 1-39 1-34 (501)
415 3gdg_A Probable NADP-dependent 35.2 57 0.0019 23.2 4.7 35 4-40 20-55 (267)
416 3u9l_A 3-oxoacyl-[acyl-carrier 35.2 53 0.0018 24.6 4.7 33 3-38 4-36 (324)
417 3fkq_A NTRC-like two-domain pr 35.2 42 0.0014 25.7 4.2 38 3-40 142-181 (373)
418 3f5d_A Protein YDEA; unknow pr 35.2 42 0.0014 23.4 3.9 41 1-42 1-42 (206)
419 2j48_A Two-component sensor ki 35.1 60 0.002 18.9 4.2 33 106-138 44-85 (119)
420 1xx6_A Thymidine kinase; NESG, 35.1 67 0.0023 22.2 4.9 39 3-41 7-46 (191)
421 3hh1_A Tetrapyrrole methylase 35.0 27 0.00092 22.0 2.6 18 21-38 69-86 (117)
422 1txg_A Glycerol-3-phosphate de 35.0 23 0.00078 26.4 2.5 30 5-39 2-31 (335)
423 3c85_A Putative glutathione-re 34.9 20 0.00067 24.2 2.0 34 3-41 39-73 (183)
424 3pef_A 6-phosphogluconate dehy 34.9 32 0.0011 25.1 3.3 32 4-40 2-33 (287)
425 2dkn_A 3-alpha-hydroxysteroid 34.9 32 0.0011 24.1 3.3 31 6-39 3-33 (255)
426 3d3j_A Enhancer of mRNA-decapp 34.8 31 0.0011 26.0 3.3 34 4-40 133-168 (306)
427 3ged_A Short-chain dehydrogena 34.7 48 0.0016 24.0 4.2 33 5-40 3-35 (247)
428 3u7q_A Nitrogenase molybdenum- 34.7 36 0.0012 27.5 3.8 27 106-135 416-442 (492)
429 3psh_A Protein HI_1472; substr 34.6 49 0.0017 24.5 4.4 32 106-137 83-115 (326)
430 4fn4_A Short chain dehydrogena 34.6 53 0.0018 23.9 4.4 35 3-40 6-40 (254)
431 1l5x_A SurviVal protein E; str 34.6 62 0.0021 24.1 4.8 39 5-45 2-40 (280)
432 1mio_B Nitrogenase molybdenum 34.5 44 0.0015 26.6 4.2 34 92-134 376-409 (458)
433 3axb_A Putative oxidoreductase 34.5 12 0.00041 29.2 0.9 34 1-39 21-55 (448)
434 4g81_D Putative hexonate dehyd 34.4 47 0.0016 24.2 4.1 34 3-39 8-41 (255)
435 3i12_A D-alanine-D-alanine lig 34.3 31 0.0011 26.4 3.2 39 1-39 1-43 (364)
436 1mv8_A GMD, GDP-mannose 6-dehy 34.2 49 0.0017 26.0 4.5 29 4-37 1-29 (436)
437 4gwg_A 6-phosphogluconate dehy 34.2 22 0.00077 28.7 2.5 35 1-40 2-36 (484)
438 3cx3_A Lipoprotein; zinc-bindi 34.2 48 0.0016 24.5 4.2 43 91-136 213-257 (284)
439 3fgn_A Dethiobiotin synthetase 34.1 51 0.0017 24.0 4.2 35 4-38 26-62 (251)
440 2o1e_A YCDH; alpha-beta protei 34.1 53 0.0018 24.7 4.5 43 92-137 227-271 (312)
441 3ioy_A Short-chain dehydrogena 34.0 72 0.0025 23.7 5.2 34 4-40 8-41 (319)
442 3u5t_A 3-oxoacyl-[acyl-carrier 33.9 38 0.0013 24.5 3.6 34 3-39 26-59 (267)
443 1cyd_A Carbonyl reductase; sho 33.9 34 0.0012 23.9 3.3 33 5-40 8-40 (244)
444 2pnf_A 3-oxoacyl-[acyl-carrier 33.6 35 0.0012 23.9 3.3 34 4-40 7-40 (248)
445 3t7c_A Carveol dehydrogenase; 33.6 54 0.0018 24.0 4.4 33 4-39 28-60 (299)
446 3qsg_A NAD-binding phosphogluc 33.5 24 0.00082 26.4 2.4 33 3-40 24-57 (312)
447 3uce_A Dehydrogenase; rossmann 33.5 40 0.0014 23.4 3.5 34 3-39 5-38 (223)
448 2wm3_A NMRA-like family domain 33.4 45 0.0015 24.2 3.9 21 21-41 19-40 (299)
449 3gaf_A 7-alpha-hydroxysteroid 33.3 49 0.0017 23.6 4.1 34 4-40 12-45 (256)
450 2oqr_A Sensory transduction pr 33.3 57 0.0019 22.4 4.3 34 106-139 47-86 (230)
451 3slg_A PBGP3 protein; structur 33.2 69 0.0024 24.0 5.1 36 1-40 22-58 (372)
452 3f6c_A Positive transcription 33.2 41 0.0014 20.6 3.3 32 106-137 45-83 (134)
453 3lk7_A UDP-N-acetylmuramoylala 33.1 61 0.0021 25.5 4.9 32 3-39 9-40 (451)
454 1u9c_A APC35852; structural ge 33.0 1.2E+02 0.0042 21.0 6.3 37 4-41 6-52 (224)
455 1c0p_A D-amino acid oxidase; a 32.9 31 0.0011 25.8 3.1 32 3-39 6-37 (363)
456 3nrn_A Uncharacterized protein 32.9 32 0.0011 26.4 3.2 29 5-38 2-30 (421)
457 2ptg_A Enoyl-acyl carrier redu 32.8 82 0.0028 23.2 5.4 33 4-38 9-42 (319)
458 2cul_A Glucose-inhibited divis 32.8 27 0.00094 24.6 2.6 35 1-40 1-35 (232)
459 1jay_A Coenzyme F420H2:NADP+ o 32.8 35 0.0012 23.4 3.1 32 5-40 2-33 (212)
460 3i3l_A Alkylhalidase CMLS; fla 32.8 37 0.0013 28.0 3.6 35 1-40 21-55 (591)
461 2q62_A ARSH; alpha/beta, flavo 32.7 73 0.0025 23.0 4.9 39 2-40 33-74 (247)
462 3pdi_A Nitrogenase MOFE cofact 32.7 38 0.0013 27.2 3.6 27 106-135 400-426 (483)
463 1nff_A Putative oxidoreductase 32.7 36 0.0012 24.4 3.3 34 4-40 7-40 (260)
464 2xxa_A Signal recognition part 32.6 66 0.0023 25.4 5.0 39 5-43 102-141 (433)
465 3uxy_A Short-chain dehydrogena 32.6 50 0.0017 23.8 4.0 32 4-38 28-59 (266)
466 1h3f_A Tyrosyl-tRNA synthetase 32.6 32 0.0011 27.3 3.1 34 7-41 43-79 (432)
467 4b79_A PA4098, probable short- 32.5 55 0.0019 23.7 4.2 33 4-39 11-43 (242)
468 2zbw_A Thioredoxin reductase; 32.5 24 0.00082 26.0 2.3 32 4-40 6-37 (335)
469 2zat_A Dehydrogenase/reductase 32.5 37 0.0013 24.2 3.3 34 4-40 14-47 (260)
470 2b69_A UDP-glucuronate decarbo 32.5 93 0.0032 22.9 5.6 33 3-39 27-59 (343)
471 3dez_A OPRT, oprtase, orotate 32.4 88 0.003 22.7 5.2 31 106-136 99-131 (243)
472 1xjc_A MOBB protein homolog; s 32.3 1.1E+02 0.0038 20.7 5.5 38 4-41 5-42 (169)
473 3qit_A CURM TE, polyketide syn 32.3 60 0.0021 22.2 4.4 34 5-39 28-61 (286)
474 3awd_A GOX2181, putative polyo 32.3 37 0.0013 24.0 3.3 33 5-40 14-46 (260)
475 3ihm_A Styrene monooxygenase A 32.3 32 0.0011 26.8 3.1 31 5-40 24-54 (430)
476 3d59_A Platelet-activating fac 32.3 42 0.0014 25.4 3.7 36 5-40 99-134 (383)
477 1mvo_A PHOP response regulator 32.3 76 0.0026 19.3 4.5 31 106-136 46-83 (136)
478 3ezl_A Acetoacetyl-COA reducta 32.2 67 0.0023 22.6 4.6 33 3-38 12-44 (256)
479 4dlp_A Aminoacyl-tRNA syntheta 32.1 53 0.0018 26.6 4.4 26 15-40 43-71 (536)
480 2wsb_A Galactitol dehydrogenas 32.1 38 0.0013 23.8 3.3 34 4-40 11-44 (254)
481 3r6d_A NAD-dependent epimerase 32.0 40 0.0014 23.2 3.3 34 4-40 5-39 (221)
482 2y0c_A BCEC, UDP-glucose dehyd 31.9 36 0.0012 27.3 3.3 30 3-37 8-37 (478)
483 4hp8_A 2-deoxy-D-gluconate 3-d 31.9 62 0.0021 23.5 4.4 34 4-40 9-42 (247)
484 3f9i_A 3-oxoacyl-[acyl-carrier 31.9 39 0.0013 23.8 3.3 35 3-40 13-47 (249)
485 1t35_A Hypothetical protein YV 31.9 90 0.0031 21.6 5.1 34 5-40 3-40 (191)
486 1g3q_A MIND ATPase, cell divis 31.9 53 0.0018 22.8 4.0 31 11-41 11-41 (237)
487 2yva_A DNAA initiator-associat 31.7 91 0.0031 21.0 5.1 34 10-43 115-148 (196)
488 3pnx_A Putative sulfurtransfer 31.7 1.1E+02 0.0036 20.7 5.3 47 1-47 2-49 (160)
489 3nbm_A PTS system, lactose-spe 31.7 46 0.0016 20.9 3.2 36 3-38 6-41 (108)
490 3afn_B Carbonyl reductase; alp 31.7 39 0.0013 23.8 3.3 34 4-40 7-40 (258)
491 1m3s_A Hypothetical protein YC 31.6 1E+02 0.0035 20.6 5.3 29 14-42 89-117 (186)
492 2cfc_A 2-(R)-hydroxypropyl-COM 31.5 39 0.0013 23.7 3.3 33 5-40 3-35 (250)
493 3oec_A Carveol dehydrogenase ( 31.5 65 0.0022 23.9 4.6 32 4-38 46-77 (317)
494 2r25_B Osmosensing histidine p 31.5 67 0.0023 19.8 4.1 32 106-137 51-90 (133)
495 1zk4_A R-specific alcohol dehy 31.5 40 0.0014 23.7 3.3 34 4-40 6-39 (251)
496 3orf_A Dihydropteridine reduct 31.5 39 0.0013 24.0 3.3 34 4-40 22-55 (251)
497 3e5n_A D-alanine-D-alanine lig 31.5 36 0.0012 26.3 3.2 40 1-40 20-63 (386)
498 3kcn_A Adenylate cyclase homol 31.4 98 0.0033 19.4 5.4 32 107-138 48-86 (151)
499 2o23_A HADH2 protein; HSD17B10 31.4 39 0.0013 23.9 3.3 34 4-40 12-45 (265)
500 2zay_A Response regulator rece 31.4 54 0.0018 20.5 3.7 33 106-138 51-92 (147)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.94 E-value=1.5e-26 Score=187.63 Aligned_cols=149 Identities=19% Similarity=0.343 Sum_probs=112.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc-CchhHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHG--VRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE-DRNELG 79 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~ 79 (166)
+.||+++|+|++||++||++||+.|++|| +.||+++++....++.+.. ....++|+|..+|++++++. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 68999999999999999999999999999 9999999976554442211 01135799999999887652 112222
Q ss_pred HHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccHHHHHHHhccchhhhC
Q 043556 80 NKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAASVALCFRIPKLIDD 154 (166)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (166)
..+..+.+.+.+.+++.++++.++...++||||+|.+++|+.++|+++|||++.||+++++.+++++|++.+.++
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 223333334444566666654322125799999999999999999999999999999999999999999887654
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.93 E-value=1.7e-25 Score=182.72 Aligned_cols=158 Identities=32% Similarity=0.571 Sum_probs=116.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCC-CCCCCeeeeecCCCCCCCc---C-c
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKN-NLEEKIRLVSIPDGMEPWE---D-R 75 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~-~~~~~i~~~~l~~~~~~~~---~-~ 75 (166)
|+++||+++|+|++||++||++||++|++|||+|||++++.....+.+...... ...++++|..+++++++.. . .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 346899999999999999999999999999999999999876555433210000 0014899999998776421 1 1
Q ss_pred hhHHHHHHHHHhhccHHHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEccccHHHHHHHhccchhhhC
Q 043556 76 NELGNKLKKILQVMPGNLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAASVALCFRIPKLIDD 154 (166)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (166)
.+...+++.+.+.+.+.++++++.+.++. +.++||||+|.++.|+..+|+++|||++.++++++...+.+++++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 23444455454567788999998876320 15899999999999999999999999999999999998888888776666
Q ss_pred CCcC
Q 043556 155 GIIS 158 (166)
Q Consensus 155 ~~~~ 158 (166)
+..|
T Consensus 166 ~~~p 169 (482)
T 2pq6_A 166 GIIP 169 (482)
T ss_dssp TCSS
T ss_pred CCCC
Confidence 6555
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.89 E-value=3e-22 Score=162.79 Aligned_cols=143 Identities=18% Similarity=0.301 Sum_probs=107.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCcch-----hHHHhhhccCCCCCCCeeeeecCCCC-CCCcC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEYNH-----QRVLKSLEGKNNLEEKIRLVSIPDGM-EPWED 74 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~-----~~~~~~~~~~~~~~~~i~~~~l~~~~-~~~~~ 74 (166)
++||+++|+|++||++||++||++|++| ||+|||+++.... ..+.+ .. ...++++|..+|++. +....
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~-~~---~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS-VL---ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHH-HH---CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhh-cc---cCCCCceEEECCCCCCCcccc
Confidence 5799999999999999999999999999 9999999988642 22221 11 112489999998763 32111
Q ss_pred chhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccHHHHHHHhccchhh
Q 043556 75 RNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAASVALCFRIPKLI 152 (166)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~ 152 (166)
..+....+......+.+.++++++++ + ..++||||+|.++.|+..+|+++|||++.+++++++.++.++|+|.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~-~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTI-L--SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHH-C--CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhc-c--CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11111112223345666788888876 2 268999999999999999999999999999999999999999988653
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.88 E-value=4.3e-22 Score=162.56 Aligned_cols=146 Identities=23% Similarity=0.413 Sum_probs=108.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCc--chhHHHhhhccCCCCCCCeeeeecCCCCCCC-cCchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEY--NHQRVLKSLEGKNNLEEKIRLVSIPDGMEPW-EDRNEL 78 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~--~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~~~ 78 (166)
++||+++|+|++||++|+++||++|++| ||+||++++.. ....+.+.. . ...++++|+.++++..+. ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~-~--~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL-D--SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH-C---CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc-c--ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999887 333333210 0 002489999988653111 111123
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhhcCCCCc-cEEEecCccchHHHHHHHhCCceEEEccccHHHHHHHhccchhhh
Q 043556 79 GNKLKKILQVMPGNLEELIEEINEKEDEKI-DCFIADAYMGWTMRIAEKMKLRRGVVWPSSAASVALCFRIPKLID 153 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~ 153 (166)
...+......+.+.++++++.+.+ ..++ ||||+|.++.|+..+|+++|||++.++++++...+.++|+|.+.+
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 156 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE 156 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence 222223334566778888887642 2578 999999999999999999999999999999999999998886653
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.87 E-value=1.7e-21 Score=158.12 Aligned_cols=148 Identities=18% Similarity=0.333 Sum_probs=101.9
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcC-chhH
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGV--RVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWED-RNEL 78 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh--~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~-~~~~ 78 (166)
++.||+++|+|++||++|+++||++|++||| .||+++++.....+.+... ....+++++..+++++++... ..+.
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--HTMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--ccCCCceEEEeCCCCCCCcccccCCh
Confidence 3589999999999999999999999999965 5677887654433322110 001247999999887765421 1112
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccHHHHHHHhccchh
Q 043556 79 GNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAASVALCFRIPKL 151 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l 151 (166)
...+..+.+.+...++++++++.++...++||||+|.++.|+..+|+++|||++.+++++++.++.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 2222233333334556666554321125899999999999999999999999999999999988887776644
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.83 E-value=1e-19 Score=145.51 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=93.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc-C----c
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE-D----R 75 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~ 75 (166)
|.++||++++++++||++|+++|+++|++|||+||+++++...+.+.+. ++++..++++++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5568999999999999999999999999999999999999876666543 788888876543321 1 1
Q ss_pred hhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccH
Q 043556 76 NELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~ 139 (166)
.+....+..+.+......+++.+.+. +.+|||||+|.+..|+..+|+++|||++.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYA---DDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTT---TSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh---ccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 23223333333322233344444433 26899999999888999999999999999998765
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.74 E-value=1.1e-17 Score=132.21 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCC-------C--
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEP-------W-- 72 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------~-- 72 (166)
+++||+|+++|++||++|+++||++|++|||+|||++++......+ .++.+..+..+... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhccccccc
Confidence 4689999999999999999999999999999999999987655432 25555555432211 0
Q ss_pred --cCc----hhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccHH
Q 043556 73 --EDR----NELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAA 140 (166)
Q Consensus 73 --~~~----~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~ 140 (166)
... .........+.......+.++++.+.+ .+||+||+|.+..++..+|+++|||++.+...+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 000 001111112222222233444444432 57999999999999999999999999998776543
No 8
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.72 E-value=6.3e-17 Score=127.74 Aligned_cols=125 Identities=18% Similarity=0.204 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc-----Cc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE-----DR 75 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-----~~ 75 (166)
|.++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+ .++++..++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEecccccccccccccccc
Confidence 666799999999999999999999999999999999999877666654 3788888765432210 11
Q ss_pred hhHHHHHHH-HHhhccHHHHHHHHHHhhcCCCCccEEEec-CccchHHHHHHHhCCceEEEccc
Q 043556 76 NELGNKLKK-ILQVMPGNLEELIEEINEKEDEKIDCFIAD-AYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D-~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
.+....+.. +.......+.++.+.+.+ .+||+||+| .+..++..+|+++|||++.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~ 133 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGG 133 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecc
Confidence 222222222 332222334555555442 689999999 77788899999999999998744
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.69 E-value=2.4e-16 Score=125.86 Aligned_cols=122 Identities=12% Similarity=0.184 Sum_probs=84.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCC-cC-chhHHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPW-ED-RNELGNK 81 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~-~~~~~~~ 81 (166)
+||++++.++.||++|+++|+++|++|||+||++++....+.+.+ .++++..++....+. .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHHHhhcccccchHH
Confidence 489999999999999999999999999999999999986555543 378888887543211 00 0111111
Q ss_pred HHHHHhhccHHHHHHHHHHhhcCCCCccEEEecC-ccch--HHHHHHHhCCceEEEcccc
Q 043556 82 LKKILQVMPGNLEELIEEINEKEDEKIDCFIADA-YMGW--TMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~-~~~~--~~~vA~~l~iP~i~~~~~~ 138 (166)
+..+. .....+.++++.+. ..+||+||+|. +..| +..+|+++|||++.+++++
T Consensus 72 ~~~~~---~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 72 VRRFT---TEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHHH---HHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHH---HHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 11111 11223334443321 26899999998 6778 8999999999999998876
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.69 E-value=2.9e-16 Score=125.43 Aligned_cols=127 Identities=20% Similarity=0.199 Sum_probs=88.8
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc-C----c
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE-D----R 75 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~ 75 (166)
|+++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+ .++++..++...+... . .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 345799999999999999999999999999999999999876555443 3788888876543221 0 1
Q ss_pred hhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccH
Q 043556 76 NELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~ 139 (166)
.+....+..+.......+.++.+.+.+ .+||+||+|.+..++..+|+++|||++.+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~ 136 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLV 136 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEecccc
Confidence 122222222222222234444444432 6899999998877889999999999999986653
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.65 E-value=7.2e-16 Score=122.56 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=88.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCc-----hh
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDR-----NE 77 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-----~~ 77 (166)
++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+ .++++..++...+..... .+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEeccccccccccchhhcccc
Confidence 4799999999999999999999999999999999998887777654 378888887654332100 00
Q ss_pred HHHHHHH-HHhhccHHHHHHHHHHhhcCCCCccEEEec-CccchHHHHHHHhCCceEEEcccc
Q 043556 78 LGNKLKK-ILQVMPGNLEELIEEINEKEDEKIDCFIAD-AYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D-~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
....+.. +.......+.++.+.+.+ .+||+||+| ....++..+|+++|||++.+.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 1111111 222222234444444432 689999999 777788899999999999987443
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.62 E-value=1.9e-15 Score=120.53 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=83.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc---CchhHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE---DRNELGN 80 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~---~~~~~~~ 80 (166)
+||++++.++.||++|+++++++|++|||+||++++....+.+.+. ++++..++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 4899999999999999999999999999999999998766555543 788887775421110 0011111
Q ss_pred HHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecC-ccch--HHHHHHHhCCceEEEcccc
Q 043556 81 KLKKILQVMPGNLEELIEEINEKEDEKIDCFIADA-YMGW--TMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~-~~~~--~~~vA~~l~iP~i~~~~~~ 138 (166)
.+..+.. ....++++.+.+. ..+||+||+|. +..+ +..+|+++|||++.+++++
T Consensus 72 ~~~~~~~---~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 72 EEQRLAA---MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHHHHH---HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHH---HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 1111111 1223334433321 26899999997 4566 7889999999999988775
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.61 E-value=5.4e-15 Score=118.86 Aligned_cols=125 Identities=13% Similarity=0.082 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCC-C-c------
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEP-W-E------ 73 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~-~------ 73 (166)
..+||++++.++.||++|++.|+++|++|||+|+++++....+.+.+ .++++..++...+. . .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhcc
Confidence 35799999999999999999999999999999999999887655543 37888888754210 0 0
Q ss_pred --------C-----ch--hHH---HHHHHHHhh----c-cH-HHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCC
Q 043556 74 --------D-----RN--ELG---NKLKKILQV----M-PG-NLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKL 129 (166)
Q Consensus 74 --------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~i 129 (166)
+ .. ... .....+.+. . .. .+.++++.+.+ .+||+||+|.+..++..+|+++||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 0 00 111 111112111 1 12 56666665543 589999999987888999999999
Q ss_pred ceEEEcccc
Q 043556 130 RRGVVWPSS 138 (166)
Q Consensus 130 P~i~~~~~~ 138 (166)
|++.+...+
T Consensus 167 P~v~~~~~~ 175 (441)
T 2yjn_A 167 PHARLLWGP 175 (441)
T ss_dssp CEEEECSSC
T ss_pred CEEEEecCC
Confidence 999987654
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.55 E-value=8e-14 Score=109.75 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=83.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCC------------CC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGM------------EP 71 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------------~~ 71 (166)
+||++++.++.||++|++.|+++|++|||+|+++++....+.+.. .++++..++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 489999999999999999999999999999999998876554443 367777765432 00
Q ss_pred CcCch-hHHHHH-HH-HHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 72 WEDRN-ELGNKL-KK-ILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
..... .....+ .. +.......+.++.+.+.+ .+||+||+|.+..++..+|+++|||++.++..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 00010 111111 11 111122234444444432 579999999887788899999999999987554
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.55 E-value=5.3e-14 Score=111.45 Aligned_cols=119 Identities=16% Similarity=0.242 Sum_probs=83.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCC------------
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGME------------ 70 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------------ 70 (166)
.+||++++.++.||++|++.|+++|.+|||+|+++++ ...+.+.. .++++..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccCC
Confidence 4799999999999999999999999999999999999 66655544 3788888764311
Q ss_pred ----------CCcCchhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 71 ----------PWEDRNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
...........+..........+.+++++ .+||+||+|....++..+|+++|||++.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 00001111111222222222233444433 57999999988778889999999999987654
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.51 E-value=2.1e-14 Score=114.35 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=81.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCc--CchhHHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWE--DRNELGNK 81 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~~~~~~~ 81 (166)
+||++++.++.||++|++.|+++|++|||+|+++++....+.+++. ++.+..++....... ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 4899999999999999999999999999999999998877766553 788887764422100 00000000
Q ss_pred HHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchH---HHHHHHhCCceEEEccccH
Q 043556 82 LKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWT---MRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~---~~vA~~l~iP~i~~~~~~~ 139 (166)
...+.......++++.+.. .++|+||.|.....+ ..+|+++|||++.++.++.
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 0111111122233333222 368999998665443 6899999999999887775
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.49 E-value=9.8e-14 Score=109.83 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=83.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCC------------
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGME------------ 70 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------------ 70 (166)
++||++++.++.||++|++.|+++|.+|||+|+++++....+.+.+. ++.+..++....
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 57999999999999999999999999999999999987766666543 677766653110
Q ss_pred -CCc--Cchh-HHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 71 -PWE--DRNE-LGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 71 -~~~--~~~~-~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
... .... .......+.......+.++.+.+.+ .+||+||+|....++..+|+++|||++.+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 000 0001 1111112222222223344443332 589999999877788899999999999877553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.45 E-value=4.1e-13 Score=105.85 Aligned_cols=124 Identities=11% Similarity=0.071 Sum_probs=80.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeec-CCCCC----------C
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSI-PDGME----------P 71 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~----------~ 71 (166)
++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+. ++++..+ ..... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999987665555442 6777666 32110 0
Q ss_pred CcC------chhHHHHHHHHHhhc----cHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 72 WED------RNELGNKLKKILQVM----PGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 72 ~~~------~~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
... .......+......+ ...+.++.+.+.+ .+||+||.|....++..+|+++|||++.+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 000 011111111111111 1113333433332 589999999877778889999999999986444
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.37 E-value=3e-12 Score=101.30 Aligned_cols=124 Identities=18% Similarity=0.050 Sum_probs=81.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCC-------------
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGM------------- 69 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------------- 69 (166)
++||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .++.+..++...
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhhhc
Confidence 5799999999999999999999999999999999999866444443 378888776410
Q ss_pred ----CCCcCchhHHHHHHHHHhh-ccHHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 70 ----EPWEDRNELGNKLKKILQV-MPGNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 70 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
+..............+... ....+.++.+.+.+ .+||+||.|....++..+|+++|||++......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 0000000000011111111 11112333333332 589999999877777889999999999876553
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.14 E-value=2.7e-10 Score=89.71 Aligned_cols=114 Identities=15% Similarity=0.146 Sum_probs=70.3
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcch-hHHHhhhccCCCCCCCeeeeecCC-CCCCCcCc---h
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNH-QRVLKSLEGKNNLEEKIRLVSIPD-GMEPWEDR---N 76 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~---~ 76 (166)
=+.||++...++-||++|.+.|+++|.+|||+|+|+++.... ...... .++.+..++. +++..... .
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC--------------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHHH
Confidence 056899988877799999999999999999999999876532 222111 3677777653 22111000 1
Q ss_pred hHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEE
Q 043556 77 ELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVV 134 (166)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~ 134 (166)
.+...+..+. ....++++ .+||+||.+..... +...|..+|||++..
T Consensus 73 ~~~~~~~~~~-----~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 73 APLELLKSLF-----QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CHHHHHHHHH-----HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHH-----HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 1111121111 12334444 58999999976543 455788899999974
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.61 E-value=4.3e-07 Score=70.35 Aligned_cols=120 Identities=15% Similarity=0.149 Sum_probs=70.5
Q ss_pred CCC--CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchh-HHHhhhccCCCCCCCeeeeecCCC-CCCCcCch
Q 043556 1 MSN--PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQ-RVLKSLEGKNNLEEKIRLVSIPDG-MEPWEDRN 76 (166)
Q Consensus 1 ~~~--~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~ 76 (166)
|++ +||++++.+..||..+++.|+++|+++||+|++++...... ..... .++++..++.. ....
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~---- 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK--------HGIEIDFIRISGLRGK---- 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG--------GTCEEEECCCCCCTTC----
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc--------cCCceEEecCCccCcC----
Confidence 454 79999998777999999999999999999999999865322 11111 26777666532 1111
Q ss_pred hHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCcc--chHHHHHHHhCCceEEEcc
Q 043556 77 ELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYM--GWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~--~~~~~vA~~l~iP~i~~~~ 136 (166)
.....+....... ..+..+.+.+.+ .+||+|+++... ..+..++...|+|++....
T Consensus 70 ~~~~~~~~~~~~~-~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 70 GIKALIAAPLRIF-NAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp CHHHHHTCHHHHH-HHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred ccHHHHHHHHHHH-HHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 1111000000000 012222333322 479999998643 2356678889999986543
No 22
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.39 E-value=0.0015 Score=51.52 Aligned_cols=123 Identities=16% Similarity=0.169 Sum_probs=66.9
Q ss_pred CCEEEEEcC---C--------CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCC
Q 043556 3 NPHVLVIPA---P--------AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEP 71 (166)
Q Consensus 3 ~~~il~~~~---p--------~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 71 (166)
++||++++. | .-|+-..+..+++.|.++||+|++++........... ....++++..++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCcc
Confidence 579999985 2 2478889999999999999999999876432110000 00136777666532111
Q ss_pred CcCchhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHhCCceEEEcccc
Q 043556 72 WEDRNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l~iP~i~~~~~~ 138 (166)
..........+..+.. ..++..++. ..+||+|++..... .+..++..+++|++...-..
T Consensus 95 ~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~ 155 (438)
T 3c48_A 95 GLSKEELPTQLAAFTG---GMLSFTRRE-----KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL 155 (438)
T ss_dssp SCCGGGGGGGHHHHHH---HHHHHHHHH-----TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccchhHHHHHHHHHHH---HHHHHHHhc-----cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCC
Confidence 1011111111111111 011111222 13499999765332 23457778999998765443
No 23
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.38 E-value=0.0021 Score=50.35 Aligned_cols=134 Identities=13% Similarity=0.112 Sum_probs=68.7
Q ss_pred CCCEEEEEcCC----C-CCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHh--h---hcc------CCCCCCCeeeeec
Q 043556 2 SNPHVLVIPAP----A-QGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLK--S---LEG------KNNLEEKIRLVSI 65 (166)
Q Consensus 2 ~~~~il~~~~p----~-~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~--~---~~~------~~~~~~~i~~~~l 65 (166)
+.+||++++.. . -|--.-+..|++.|+++||+|+++++......... . +.. ......++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35899998843 2 35456689999999999999999996532211000 0 000 0001136666655
Q ss_pred CCCC-CCCcCch-hHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEEccc
Q 043556 66 PDGM-EPWEDRN-ELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 66 ~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~~ 137 (166)
+... ....... ........+.. ....+..+++.+... ..+||+|.+...... +..++...|+|++...-.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~ 154 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLRE-EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHR 154 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTT-SCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESC
T ss_pred cchhccccccccCCcchhhhhhHH-HHHHHHHHHHHHhcc-CCCCeEEEecchhhhhhHHHHhhccCCCEEEEecc
Confidence 4311 0000001 11111111111 111234445444211 268999997654332 455677899999885543
No 24
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.23 E-value=0.0027 Score=51.16 Aligned_cols=126 Identities=19% Similarity=0.202 Sum_probs=67.9
Q ss_pred CCEEEEEcCC---------------CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCC-C--CCCCeeeee
Q 043556 3 NPHVLVIPAP---------------AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKN-N--LEEKIRLVS 64 (166)
Q Consensus 3 ~~~il~~~~p---------------~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~-~--~~~~i~~~~ 64 (166)
.+||++++.. .-|.-..+..+++.|+++||+|++++........ ..+.... . ...++++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~gv~v~~ 85 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENW-PEFSGEIDYYQETNKVRIVR 85 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTB-GGGCCSEEECTTCSSEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccc-cchhhhHHhccCCCCeEEEE
Confidence 3799999852 2466688999999999999999999865332110 0000000 0 024777777
Q ss_pred cCCCCCCCcCchhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHhCCceEEEccc
Q 043556 65 IPDGMEPWEDRNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l~iP~i~~~~~ 137 (166)
++..................+. ..+..++++. ..++|+|.+..... .+..++..+|+|++...-.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~----~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 86 IPFGGDKFLPKEELWPYLHEYV----NKIINFYREE----GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp ECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHHH----TCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred ecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHhc----CCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 6632111101111111111111 1233344331 13799998765332 2445778899999875544
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.75 E-value=0.0066 Score=46.78 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=64.1
Q ss_pred CCCCEEEEEcC--C--CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCch
Q 043556 1 MSNPHVLVIPA--P--AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRN 76 (166)
Q Consensus 1 ~~~~~il~~~~--p--~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 76 (166)
|+++||++++. + .-|.-.-+..+++.| +||+|++++............ ...++.+..++..... .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~ 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVML----P 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCC----S
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccccccc----c
Confidence 45789999975 3 347778888999999 799999999876543211110 0136777666532211 0
Q ss_pred hHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCcc--chHHHHHHHhCCceEE
Q 043556 77 ELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYM--GWTMRIAEKMKLRRGV 133 (166)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~--~~~~~vA~~l~iP~i~ 133 (166)
.. . . ...+.+++++ .++|+|+..... .+...++.++++|.+.
T Consensus 71 ~~-~---~-----~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i 114 (394)
T 3okp_A 71 TP-T---T-----AHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVI 114 (394)
T ss_dssp CH-H---H-----HHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEE
T ss_pred ch-h---h-----HHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEE
Confidence 11 0 0 0123444444 579999976433 3456678899998444
No 26
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.29 E-value=0.073 Score=41.12 Aligned_cols=113 Identities=14% Similarity=0.205 Sum_probs=60.9
Q ss_pred CCEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCC-CCCCcCchhHHH
Q 043556 3 NPHVLVIPAPAQ-GHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDG-MEPWEDRNELGN 80 (166)
Q Consensus 3 ~~~il~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~ 80 (166)
++++....+|.. |.-.-...+++.|+++||+|++++...... ... ..+++.+..++.. .+.. ..... .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~~~~~-~~~~~-~ 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQYSVF-QYPPY-D 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----C-CSCCH-H
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEeccccccccc-ccccc-c
Confidence 567777878765 556778899999999999999998764321 111 1136666554321 1100 00000 0
Q ss_pred HHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHh---CCceEEEccc
Q 043556 81 KLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKM---KLRRGVVWPS 137 (166)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l---~iP~i~~~~~ 137 (166)
... ...+.+++++ .+||+|+...... +...++.++ ++|++...-.
T Consensus 85 -~~~-----~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 85 -LAL-----ASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp -HHH-----HHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred -HHH-----HHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 000 0123444443 4789999864332 234455544 5998876544
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.22 E-value=0.079 Score=40.66 Aligned_cols=113 Identities=13% Similarity=0.093 Sum_probs=58.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHhhhccCCCCCCCeee-eecCCCCCCCcCchhHHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRL-VSIPDGMEPWEDRNELGNK 81 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~ 81 (166)
+||++++.. .+.......++++|.++ ||+|.++++............ ..++.+ ..++-. .. ..+....
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~--~~~~~~~ 75 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDRNLDVM--QE--RQALPDL 75 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSEECCCC--SS--CCCHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-----HcCCCcccccccC--CC--CccHHHH
Confidence 689998854 33345567889999998 899887766543222111110 013322 122211 10 1111111
Q ss_pred HHHHHhhccHHHHHHHHHHhhcCCCCccEEEe--cCccch-HHHHHHHhCCceEEEcc
Q 043556 82 LKKILQVMPGNLEELIEEINEKEDEKIDCFIA--DAYMGW-TMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~--D~~~~~-~~~vA~~l~iP~i~~~~ 136 (166)
..... ..+.+++++ .+||+|+. +....+ +..+|..+|||++....
T Consensus 76 ~~~~~----~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 123 (376)
T 1v4v_A 76 AARIL----PQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEA 123 (376)
T ss_dssp HHHHH----HHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETC
T ss_pred HHHHH----HHHHHHHHH------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeC
Confidence 11111 123444443 68999997 323334 45678889999986543
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.98 E-value=0.034 Score=42.97 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=32.1
Q ss_pred CCEEEEEcCC---C-CCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 3 NPHVLVIPAP---A-QGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~~p---~-~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
++||+++..- . -|.-.-+..+++.|+++||+|++++....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 5789999842 2 35668899999999999999999998754
No 29
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=95.80 E-value=0.011 Score=44.84 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCC----------------CCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAP----------------AQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p----------------~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|+++||+++... .-|.-.-...+++.|.++||+|++++...
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 778999999876 24666788999999999999999998764
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=95.64 E-value=0.093 Score=40.09 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC-C-CEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH-G-VRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r-G-h~Vt~~t~~~ 41 (166)
++||++++. ..++......++++|+++ | |+|.++++..
T Consensus 8 ~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 579999974 357778888999999987 5 8887777654
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.58 E-value=0.069 Score=41.00 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=58.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCC-EEEEEeCCcch---hHHHhhhccCCCCCCCeee-eecCCCCCCCcCchhH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGV-RVTFVNSEYNH---QRVLKSLEGKNNLEEKIRL-VSIPDGMEPWEDRNEL 78 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~t~~~~~---~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~ 78 (166)
+||++++.. .++...+..|+++|.++|+ ++.++.+.... ....... ++.+ ..++-. .. ....
T Consensus 1 mkIl~v~~~-~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~--~~~~ 67 (384)
T 1vgv_A 1 MKVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF--------SIVPDYDLNIM--QP--GQGL 67 (384)
T ss_dssp CEEEEEECS-HHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH--------TCCCSEECCCC--ST--TSCH
T ss_pred CeEEEEecc-cHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc--------CCCCCcceecC--CC--CccH
Confidence 478887644 5667888999999999994 88776543321 1121111 3322 222211 10 1112
Q ss_pred HHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecC--ccch-HHHHHHHhCCceEEEcc
Q 043556 79 GNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADA--YMGW-TMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~--~~~~-~~~vA~~l~iP~i~~~~ 136 (166)
... ... ....+.+++++ .+||+|+.-. ...+ +..+|...|+|++....
T Consensus 68 ~~~---~~~-~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 68 TEI---TCR-ILEGLKPILAE------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HHH---HHH-HHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HHH---HHH-HHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 111 110 11124445544 4799999632 3333 45567789999987654
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=95.54 E-value=0.074 Score=41.83 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcchh---HHHhhhccCCCCCCCeee-eecCCCCCCCcCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEYNHQ---RVLKSLEGKNNLEEKIRL-VSIPDGMEPWEDR 75 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~~~---~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~ 75 (166)
|+++||++++. ....+.=+-+|.++|.++ |+++.++.+..... .....+ +++. ..+. .... .
T Consensus 23 ~~m~ki~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~--------~i~~~~~l~--~~~~--~ 89 (396)
T 3dzc_A 23 NAMKKVLIVFG-TRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF--------SITPDFDLN--IMEP--G 89 (396)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT--------TCCCSEECC--CCCT--T
T ss_pred CCCCeEEEEEe-ccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc--------CCCCceeee--cCCC--C
Confidence 34567877764 445677778899999987 79988776655432 111111 2210 1111 1000 0
Q ss_pred hhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEe-c-Cccch-HHHHHHHhCCceEEEc
Q 043556 76 NELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIA-D-AYMGW-TMRIAEKMKLRRGVVW 135 (166)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~-D-~~~~~-~~~vA~~l~iP~i~~~ 135 (166)
.+..... . ..-..+.+++++ .+||+|+. + ....+ +...|.++|||++.+.
T Consensus 90 ~~~~~~~---~-~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 90 QTLNGVT---S-KILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp CCHHHHH---H-HHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred CCHHHHH---H-HHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1121111 1 111134555554 57898884 3 33334 4668889999988764
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=95.37 E-value=0.065 Score=42.31 Aligned_cols=112 Identities=15% Similarity=0.154 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCcch---hHHHhhhccCCCCCCCeee-eecCCCCCCCcC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEYNH---QRVLKSLEGKNNLEEKIRL-VSIPDGMEPWED 74 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~---~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~ 74 (166)
|+++||++++..- ..+.=+-.|.++|.++ |+++.++.+.... ......+ +++. ..+. ....
T Consensus 25 m~~~kI~~v~Gtr-~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~--------~i~~~~~l~--v~~~-- 91 (403)
T 3ot5_A 25 MAKIKVMSIFGTR-PEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF--------DIKPDIDLD--IMKK-- 91 (403)
T ss_dssp -CCEEEEEEECSH-HHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT--------TCCCSEECC--CCC---
T ss_pred cccceEEEEEecC-hhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc--------CCCCCcccc--cCCC--
Confidence 5556888877544 4556668899999988 6898877666432 1111111 2210 1111 1000
Q ss_pred chhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEe-cC-ccch-HHHHHHHhCCceEEEc
Q 043556 75 RNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIA-DA-YMGW-TMRIAEKMKLRRGVVW 135 (166)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~-D~-~~~~-~~~vA~~l~iP~i~~~ 135 (166)
..+.... ... .-..+.+++++ .+||+|+. +. ...+ +...|.++|||++.+.
T Consensus 92 ~~~~~~~---~~~-~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 92 GQTLAEI---TSR-VMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CCCHHHH---HHH-HHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCHHHH---HHH-HHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1112111 111 11135555554 57898884 33 3334 4678899999988765
No 34
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=94.74 E-value=0.055 Score=42.14 Aligned_cols=42 Identities=12% Similarity=0.138 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCC--CCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 1 MSNPHVLVIPAPA--QGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 1 ~~~~~il~~~~p~--~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
|+++||+++.... -|+-..+..+++.|+++||+|++++....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 5678999887653 47788889999999999999999887643
No 35
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=94.45 E-value=0.37 Score=36.58 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=64.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHhhhccCCCCCCCe-eeeecCCCCCCCcCchhHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVLKSLEGKNNLEEKI-RLVSIPDGMEPWEDRNELGN 80 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~~~~~ 80 (166)
+||+++...+.|++.-...+.+.|+++ |.+|++++.+...+.++.. +.+ ++..++.. .. ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~~--~~~~-- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--HG--ALEI-- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC-----------CH--
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--cc--ccch--
Confidence 489999999889999999999999987 9999999998665544322 345 33333211 00 0000
Q ss_pred HHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCcc-chHHHHHHHhCCceE
Q 043556 81 KLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYM-GWTMRIAEKMKLRRG 132 (166)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~-~~~~~vA~~l~iP~i 132 (166)
..+.++.+.+.+ .+||++| |.-. .-...++...|+|..
T Consensus 67 ----------~~~~~l~~~l~~---~~~D~vi-d~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 67 ----------GERRKLGHSLRE---KRYDRAY-VLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp ----------HHHHHHHHHTTT---TTCSEEE-ECSCCSGGGHHHHHTTCSEE
T ss_pred ----------HHHHHHHHHHHh---cCCCEEE-ECCCChHHHHHHHHhCCCEE
Confidence 123445555543 6899988 4432 334567777889874
No 36
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=94.35 E-value=0.11 Score=34.79 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=39.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
|++.+|++.+.++-+|-....=++..|..+|++|..+......+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 778999999999999999999999999999999998876443333
No 37
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=94.03 E-value=0.094 Score=45.37 Aligned_cols=126 Identities=16% Similarity=0.172 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCC------------CChHHHH---------HHHHHHHHCCCEEE----EEeCCcchhHHHhhhccC---C
Q 043556 3 NPHVLVIPAPAQ------------GHVIPLL---------EFSQCLANHGVRVT----FVNSEYNHQRVLKSLEGK---N 54 (166)
Q Consensus 3 ~~~il~~~~p~~------------GH~~P~l---------~la~~L~~rGh~Vt----~~t~~~~~~~~~~~~~~~---~ 54 (166)
..+|++++.-|. |-.+-.+ +|+++|+++||+|+ ++|....... ...+... .
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~-g~~y~~~~e~i 356 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAV-GTTCGERLERV 356 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCT-TSSTTSSEEEC
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCC-CCccCCcceee
Confidence 467888887664 3334444 58889999999997 7765432210 0001000 0
Q ss_pred CCCCCeeeeecCCCCCC-----CcCchhHHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCcc--chHHHHHHHh
Q 043556 55 NLEEKIRLVSIPDGMEP-----WEDRNELGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYM--GWTMRIAEKM 127 (166)
Q Consensus 55 ~~~~~i~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~--~~~~~vA~~l 127 (166)
...+++.+..+|-+-.. .-....+..++..|.. ..+..+++.. ..+||+|.+-... ..+..+++++
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~---~~l~~il~~~----~~~PDVIHsH~~~sglva~llar~~ 429 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE---DAAVELSKEL----NGKPDLIIGNYSDGNLVASLLAHKL 429 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHH---HHHHHHHHHC----SSCCSEEEEEHHHHHHHHHHHHHHH
T ss_pred cCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHH---HHHHHHHHhc----CCCCeEEEeCCchHHHHHHHHHHHc
Confidence 11136677666532110 0011122222222321 1233344332 2479999875432 2356788999
Q ss_pred CCceEEEcc
Q 043556 128 KLRRGVVWP 136 (166)
Q Consensus 128 ~iP~i~~~~ 136 (166)
|+|.+...-
T Consensus 430 gvP~V~T~H 438 (816)
T 3s28_A 430 GVTQCTIAH 438 (816)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEEe
Confidence 999987644
No 38
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=93.41 E-value=1.2 Score=30.39 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=35.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
+.+|++.+.++.+|-....-++..|..+|++|.++.....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 5799999999999999999999999999999998865443
No 39
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.71 E-value=0.059 Score=42.68 Aligned_cols=39 Identities=8% Similarity=0.179 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCC-----CChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQ-----GHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~-----GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
++||++++.... |=.....+++++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 578888875432 334568999999999999999999864
No 40
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.65 E-value=0.11 Score=39.63 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=30.1
Q ss_pred CEEEEEcC---CCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPA---PAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~---p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+||++++. +.-|.-.-+..+++.|+++||+|++++...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 36777753 344677889999999999999999999763
No 41
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.12 E-value=0.21 Score=41.00 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=28.7
Q ss_pred CCEEEEEcCCC-----CCCh-HHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPA-----QGHV-IPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~-----~GH~-~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++||+++++-. .|-+ .-.-.|.++|+++||+|+++++.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 58999997432 1322 34668999999999999999964
No 42
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=91.46 E-value=2.8 Score=29.79 Aligned_cols=99 Identities=11% Similarity=0.108 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcc-----hhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchh
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYN-----HQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNE 77 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~-----~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 77 (166)
+..|.+++.+|.|=..-.+.++.+.+.+|.+|.++..-+. ...+...+ ++++.....++... ..+
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--------~v~~~~~g~gf~~~--~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--------GVEFQVMATGFTWE--TQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--------TCEEEECCTTCCCC--GGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--------CcEEEEcccccccC--CCC
Confidence 4679999999999999999999999999999999954332 11122221 47777666554321 111
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccc
Q 043556 78 LGNKLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMG 118 (166)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~ 118 (166)
...... .....+....+.+. +.++|+||.|-+..
T Consensus 98 ~~~~~~----~a~~~l~~a~~~l~---~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 98 READTA----ACMAVWQHGKRMLA---DPLLDMVVLDELTY 131 (196)
T ss_dssp HHHHHH----HHHHHHHHHHHHTT---CTTCSEEEEETHHH
T ss_pred cHHHHH----HHHHHHHHHHHHHh---cCCCCEEEEeCCCc
Confidence 111111 11223444444443 26899999998743
No 43
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=91.33 E-value=0.34 Score=36.50 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=53.0
Q ss_pred EEEEEcCC----CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchhHHH
Q 043556 5 HVLVIPAP----AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNELGN 80 (166)
Q Consensus 5 ~il~~~~p----~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 80 (166)
+|+|..=+ |.||+.=++.||++|. +|+|++.......+.. -++.+..++.. +.
T Consensus 2 ki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~---------~g~~v~~l~~~--------d~-- 58 (282)
T 3hbm_A 2 KVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE---------IPYPVYELSSE--------SI-- 58 (282)
T ss_dssp CEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG---------CCSCEEECSSS--------CH--
T ss_pred EEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH---------CCCeEEEcCcc--------CH--
Confidence 45555544 4699999999999999 7999886542222211 14444444311 11
Q ss_pred HHHHHHhhccHHHHHHHHHHhhcCCCCccEEEecCccc---hHHHHHHHhCCceEEE
Q 043556 81 KLKKILQVMPGNLEELIEEINEKEDEKIDCFIADAYMG---WTMRIAEKMKLRRGVV 134 (166)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~~~---~~~~vA~~l~iP~i~~ 134 (166)
..+.++++. .++|+||.|.... |...+.+..+++.+.+
T Consensus 59 ----------~~~~~~l~~------~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i 99 (282)
T 3hbm_A 59 ----------YELINLIKE------EKFELLIIDHYGISVDDEKLIKLETGVKILSF 99 (282)
T ss_dssp ----------HHHHHHHHH------HTCSEEEEECTTCCHHHHHHHHHHHCCEEEEE
T ss_pred ----------HHHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHhcCcEEEEE
Confidence 112333433 3679999997553 3334444467777654
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=91.18 E-value=0.22 Score=39.59 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=29.5
Q ss_pred CEEEEEcCCC------CCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPA------QGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~------~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+||++++... -|=-.-+..|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 4788887522 2444677899999999999999999754
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=91.16 E-value=1.5 Score=34.25 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=25.0
Q ss_pred CCEEEEEc---CCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIP---APAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~---~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++||++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 57899988 44 222222345788899999 99999543
No 46
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=90.93 E-value=0.26 Score=39.15 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=29.1
Q ss_pred CEEEEEcCCC-----CC-ChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPA-----QG-HVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~-----~G-H~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+||++++... .| =-.-+..|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 4788887521 23 34667889999999999999999754
No 47
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.58 E-value=1.8 Score=33.17 Aligned_cols=104 Identities=22% Similarity=0.173 Sum_probs=67.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHhhhccCCCCCCCee-eeecCCCCCCCcCchhHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVLKSLEGKNNLEEKIR-LVSIPDGMEPWEDRNELG 79 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~ 79 (166)
..+|+++-..+.|++.-..++.+.|+++ +.+|++++.+...+-++.+ |.+. +..++.. ...
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~~ 71 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GRH 71 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SHH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------ccc
Confidence 4699999999999999999999999987 9999999998776554332 4564 4444311 010
Q ss_pred HHHHHHHhhccHHHHHHHHHHhhcCCCCc-cEEEecCccchHHHHHHHhCCceEE
Q 043556 80 NKLKKILQVMPGNLEELIEEINEKEDEKI-DCFIADAYMGWTMRIAEKMKLRRGV 133 (166)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~iI~D~~~~~~~~vA~~l~iP~i~ 133 (166)
..+. .+.++++++.+ .+| |++|.=....-...++...|+|...
T Consensus 72 ~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 NSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0011 12234444443 479 9988422223355677788988644
No 48
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=89.83 E-value=1.5 Score=34.32 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=57.9
Q ss_pred cCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchh-HHHhhhccCCCCCCCeeeeecCC-CCCCCcCchhHHHHHHHHHh
Q 043556 10 PAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQ-RVLKSLEGKNNLEEKIRLVSIPD-GMEPWEDRNELGNKLKKILQ 87 (166)
Q Consensus 10 ~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 87 (166)
-++++--+.=|-++.++|.++ ++..++.+..... .+..... .++.+. -|+ .+... ..+.......
T Consensus 15 v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~-~~~~~l~~~--~~~~~~~~~~--- 81 (385)
T 4hwg_A 15 IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIR-KPDYFLEVA--ADNTAKSIGL--- 81 (385)
T ss_dssp EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCC-CCSEECCCC--CCCSHHHHHH---
T ss_pred EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCC-CCceecCCC--CCCHHHHHHH---
Confidence 355666777788888888887 9988888876543 2222110 122221 111 11111 1111111111
Q ss_pred hccHHHHHHHHHHhhcCCCCccEEEe--cCccchHHHHHHHhCCceEEEcc
Q 043556 88 VMPGNLEELIEEINEKEDEKIDCFIA--DAYMGWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 88 ~~~~~~~~ll~~l~~~~~~~~d~iI~--D~~~~~~~~vA~~l~iP~i~~~~ 136 (166)
.-..+++++++ .+||+|+. |....++...|.++|||++.+..
T Consensus 82 -~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea 125 (385)
T 4hwg_A 82 -VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA 125 (385)
T ss_dssp -HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred -HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence 11235566655 47898774 44444557788999999887653
No 49
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=88.76 E-value=1 Score=32.44 Aligned_cols=46 Identities=22% Similarity=0.251 Sum_probs=37.8
Q ss_pred CC-CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHH
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~ 47 (166)
|. ..||++.-.++.|-+. ..+|.+.|.++|++|.++.++.....+.
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 54 4689888888877777 8999999999999999999987655543
No 50
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=88.63 E-value=1.1 Score=31.90 Aligned_cols=43 Identities=12% Similarity=0.046 Sum_probs=37.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
+.+|++.+.++..|-....-++..|.++|++|.++...-..+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 4689999999999999999999999999999999877544333
No 51
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=87.97 E-value=6.5 Score=28.98 Aligned_cols=40 Identities=18% Similarity=0.335 Sum_probs=31.8
Q ss_pred CCEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 3 NPHVLVIPA--PAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
.+++++++. ++.|=-.-...||..|+++|.+|.++=....
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 356666654 5778889999999999999999999876643
No 52
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=87.43 E-value=1.4 Score=32.53 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+|++.+.++..|-....-++..|.++|++|.++...
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 57999999999999999999999999999999988754
No 53
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.08 E-value=0.43 Score=31.95 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+.|++++- .|.+- ..+++.|.++|++|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 7788999883 35554 78899999999999999875
No 54
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=86.47 E-value=1.2 Score=31.01 Aligned_cols=42 Identities=12% Similarity=0.089 Sum_probs=33.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
..||++.-.++.|=+. ..++.+.|.++|++|+++.++...+.
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~f 46 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKF 46 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHH
Confidence 3688888888866554 88999999999999999999875443
No 55
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=86.04 E-value=2 Score=30.86 Aligned_cols=43 Identities=12% Similarity=0.092 Sum_probs=37.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
+.+|++.+.++..|-....=++..|.++|++|..+...-..+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 4799999999999999999999999999999999876544333
No 56
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=85.79 E-value=8.4 Score=28.80 Aligned_cols=38 Identities=18% Similarity=0.451 Sum_probs=30.8
Q ss_pred CEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPA--PAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.++++++. ++.|=-.-...||..|+++|.+|.++-.+.
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45665554 567888999999999999999999987654
No 57
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=83.92 E-value=1.9 Score=30.93 Aligned_cols=42 Identities=14% Similarity=0.288 Sum_probs=35.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
..||++.-.++.+-+. ..++.++|.++| +|+++.++...+.+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 5689999999988776 899999999999 99999998765443
No 58
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=83.90 E-value=2 Score=30.59 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=35.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcchhHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~~~~~~ 47 (166)
+||++.-.++.|-+. ..++.+.|.++ |++|.++.++...+.+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 378888888877665 89999999999 99999999987655543
No 59
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=83.20 E-value=1.8 Score=30.93 Aligned_cols=40 Identities=18% Similarity=0.057 Sum_probs=32.7
Q ss_pred CCEEEEEcCCCCCChH-HHHHHHHHHHHCCCEEEEEeCCcch
Q 043556 3 NPHVLVIPAPAQGHVI-PLLEFSQCLANHGVRVTFVNSEYNH 43 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~-P~l~la~~L~~rGh~Vt~~t~~~~~ 43 (166)
..||++.-.++ +... =..++.+.|.++|++|+++.++...
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 46888887777 5555 7899999999999999999887643
No 60
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=82.19 E-value=3.9 Score=28.80 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=36.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHh
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLK 48 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~ 48 (166)
.||++.-.++.|-+ =..++.++|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 48888888888855 578999999999999999999876555543
No 61
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=81.89 E-value=1.9 Score=30.93 Aligned_cols=41 Identities=12% Similarity=-0.033 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCCCChHH-HHHHHHHHHHCCCEEEEEeCCcch
Q 043556 2 SNPHVLVIPAPAQGHVIP-LLEFSQCLANHGVRVTFVNSEYNH 43 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P-~l~la~~L~~rGh~Vt~~t~~~~~ 43 (166)
+..||++.-.++ +...- ..++.+.|.++|++|.++.++...
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 356888877776 44554 789999999999999999988654
No 62
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=81.63 E-value=14 Score=27.44 Aligned_cols=39 Identities=15% Similarity=0.384 Sum_probs=31.0
Q ss_pred CEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 4 PHVLVIPA--PAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 4 ~~il~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
.++++++. ++.|=-.-...||..|+++|.+|.++-.+..
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 45666654 5668888999999999999999999876643
No 63
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=81.57 E-value=1.9 Score=30.19 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=33.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
.||++.-.++.|=+ =..++.++|.++|++|+++.++...+.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 47887777776555 6789999999999999999998754443
No 64
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=80.84 E-value=11 Score=25.74 Aligned_cols=32 Identities=13% Similarity=0.375 Sum_probs=27.0
Q ss_pred CCCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 11 APAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
-+|.|=-.-...||..|+++|.+|.++-....
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45668889999999999999999999877643
No 65
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=80.45 E-value=13 Score=27.05 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=27.4
Q ss_pred CCEEEEEcCC--CCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAP--AQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p--~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+++.++++.. +.|=-.-...|++.|+++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 3455555444 44778888999999999999999874
No 66
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=80.00 E-value=5.1 Score=26.71 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=54.7
Q ss_pred CChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchhHHHHHHHHHhhccHHHH
Q 043556 15 GHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNELGNKLKKILQVMPGNLE 94 (166)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (166)
.+-.-++++++.|.+.|++ ++++....+.++.. ++....+.+....+. . ..+ +.+.
T Consensus 34 ~dK~~l~~~a~~l~~lGf~--i~AT~GTa~~L~~~---------Gi~v~~v~k~~egg~--~----------~~~-~~i~ 89 (143)
T 2yvq_A 34 SFRPRFLGVAEQLHNEGFK--LFATEATSDWLNAN---------NVPATPVAWPSQEGQ--N----------PSL-SSIR 89 (143)
T ss_dssp GGHHHHHHHHHHHHTTTCE--EEEEHHHHHHHHHT---------TCCCEEECCGGGC-----------------C-BCHH
T ss_pred cchHHHHHHHHHHHHCCCE--EEECchHHHHHHHc---------CCeEEEEEeccCCCc--c----------ccc-ccHH
Confidence 3456689999999999987 55666666666543 676666542211100 0 001 2344
Q ss_pred HHHHHHhhcCCCCccEEEecCcc--------chHHHHHHHhCCceEEEc
Q 043556 95 ELIEEINEKEDEKIDCFIADAYM--------GWTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 95 ~ll~~l~~~~~~~~d~iI~D~~~--------~~~~~vA~~l~iP~i~~~ 135 (166)
++++. .++|+||.-.-- ......|-.+|||+++-.
T Consensus 90 d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 90 KLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 44443 689999963321 234567999999998743
No 67
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=79.88 E-value=1.7 Score=28.30 Aligned_cols=40 Identities=13% Similarity=0.122 Sum_probs=25.9
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccch--HHHHHHH---hCCceEEEc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEK---MKLRRGVVW 135 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~---l~iP~i~~~ 135 (166)
-++.++.+.+ .+||+||.|..++. +..++++ .++|+|.+.
T Consensus 42 g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3444555443 58999999997753 4555544 578876654
No 68
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=79.30 E-value=3.1 Score=31.22 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCCCCCh---HHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 1 MSNPHVLVIPAPAQGHV---IPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~---~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
|.++|..|++.+-.|-+ .-.-.+++.|.+||++||.+=-+++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 56789999998765444 7788899999999999999865543
No 69
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=79.07 E-value=3 Score=27.42 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=24.3
Q ss_pred CCccEEEecCccch--HHHHHHHh-------CCceEEEcccc
Q 043556 106 EKIDCFIADAYMGW--TMRIAEKM-------KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~~--~~~vA~~l-------~iP~i~~~~~~ 138 (166)
.+||+||.|..++. +..+++++ ++|++.+....
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 47999999998864 67776654 48887776544
No 70
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=78.47 E-value=1.4 Score=31.17 Aligned_cols=42 Identities=7% Similarity=0.024 Sum_probs=33.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
..||++.-.++.|=+. ..++.+.|.++|++|.++.++...+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 3688888888866664 78999999999999999999865433
No 71
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=78.16 E-value=2.5 Score=30.18 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEeCCcchhHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLAN-HGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~t~~~~~~~~ 46 (166)
..||++.-.++.+=+ =..++.++|.+ +|++|+++.++...+.+
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 468888888886644 45899999999 89999999998765443
No 72
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=78.04 E-value=2.6 Score=31.59 Aligned_cols=44 Identities=20% Similarity=0.207 Sum_probs=38.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~ 47 (166)
+||+++-..+.|++.-...+.+.|+++ +.+|++++.+...+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 489999999999999999999999987 99999999987765554
No 73
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=76.98 E-value=2.8 Score=29.55 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccccHH
Q 043556 91 GNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSSAA 140 (166)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~~~ 140 (166)
...++.++++.+ .++++||.|.. ...+|+++|+|.+.+.++.-+
T Consensus 129 ~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 456777777775 68999999876 478999999999998875443
No 74
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=75.45 E-value=6.2 Score=24.87 Aligned_cols=40 Identities=10% Similarity=0.124 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+..+|++++..|.|-=.-.-.+-+.+.++|.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 7778999999999977766667777888999988775533
No 75
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=74.84 E-value=6.2 Score=24.51 Aligned_cols=42 Identities=14% Similarity=0.156 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHh-------CCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (166)
++.++.+.+ .+||+||.|..++ .+..+.+++ ++|++.+....
T Consensus 36 ~~al~~l~~---~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSE---FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTT---BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHh---cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 444555442 5799999998764 356665543 57888776543
No 76
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=74.50 E-value=2.9 Score=31.75 Aligned_cols=41 Identities=22% Similarity=0.187 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
|+.++|+++-.++.| ..++..|+++||+|+++......+.+
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~ 41 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQAL 41 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHH
Confidence 777899999666655 35688999999999999864333333
No 77
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=74.33 E-value=5.1 Score=29.21 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|+++ . + |-+ =..+++.|.++||+|+.++-.
T Consensus 1 M~~~~ilVt-G-a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA-G-C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE-C-C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEE-C-C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 766787776 3 4 633 357899999999999998754
No 78
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=71.96 E-value=7.3 Score=32.34 Aligned_cols=41 Identities=10% Similarity=0.009 Sum_probs=36.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcch
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNH 43 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~ 43 (166)
+.+|++.+.++..|-....-++..|.++|++|..+...-..
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~ 138 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPA 138 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 57999999999999999999999999999999998765433
No 79
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=71.87 E-value=10 Score=27.61 Aligned_cols=41 Identities=24% Similarity=0.393 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCCCC-----------hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGH-----------VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH-----------~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|.+.||+++-....+. ..=+..-...|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 6677899988864222 1445666678888999999999754
No 80
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=71.62 E-value=5.8 Score=29.27 Aligned_cols=41 Identities=17% Similarity=0.338 Sum_probs=30.6
Q ss_pred CCCCEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPA--PAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|+.++++.+.. +|.|=-.-...||..|+++|.+|.++=.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 65566666654 566888999999999999999999886654
No 81
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=70.49 E-value=5.8 Score=26.91 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=27.8
Q ss_pred CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHh
Q 043556 13 AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLK 48 (166)
Q Consensus 13 ~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~ 48 (166)
.+--.--.+=++..|.++||+|++..++...+.++-
T Consensus 18 ~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlev 53 (157)
T 1kjn_A 18 SPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 53 (157)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheec
Confidence 345555667888999999999999999876666543
No 82
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=69.80 E-value=8.4 Score=27.98 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+.+|++.--||.|=..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 467889999999999999999999999999998887765
No 83
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=69.64 E-value=10 Score=30.95 Aligned_cols=94 Identities=13% Similarity=0.157 Sum_probs=52.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCC--CCCCCc----Cchh
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPD--GMEPWE----DRNE 77 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~----~~~~ 77 (166)
.+-++++. ++=.-++++++.|.+.|++ ++++....+.++.. ||.+..+.+ ++|+.- .+-+
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfe--I~ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTLH 75 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVE--IISTGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTLH 75 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCE--EEECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSCS
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCE--EEEcchHHHHHHHc---------CCceeeccccCCCchhhCCccccCC
Confidence 34566666 3445588999999999977 56888777777654 677665542 444421 1111
Q ss_pred HHHHHHHHH--hhccHHHHHHHHHHhhcCCCCccEEEecCc
Q 043556 78 LGNKLKKIL--QVMPGNLEELIEEINEKEDEKIDCFIADAY 116 (166)
Q Consensus 78 ~~~~~~~~~--~~~~~~~~~ll~~l~~~~~~~~d~iI~D~~ 116 (166)
+ ...-.++ +......+++-+. .=.++|+||.+..
T Consensus 76 P-~ihgGiLa~r~~~~h~~~l~~~----~i~~iDlVvvNLY 111 (523)
T 3zzm_A 76 P-RVHAGLLADLRKSEHAAALEQL----GIEAFELVVVNLY 111 (523)
T ss_dssp H-HHHHHHHCCTTSHHHHHHHHHH----TCCCCSEEEEECC
T ss_pred c-hhhhhhccCCCCHHHHHHHHHC----CCCceeEEEEeCC
Confidence 2 1122222 1233334443332 1257899998753
No 84
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=69.42 E-value=15 Score=28.59 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=19.1
Q ss_pred CCccEEEe--cCccchHHHHHHHhCCce
Q 043556 106 EKIDCFIA--DAYMGWTMRIAEKMKLRR 131 (166)
Q Consensus 106 ~~~d~iI~--D~~~~~~~~vA~~l~iP~ 131 (166)
.++|.|+. |.....+..+++++|+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 57898883 444555677899999983
No 85
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=69.34 E-value=8.6 Score=28.77 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~ 47 (166)
+++|+++-.++.|- .++..|+++||+|+++.-.. .+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~ 40 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIA 40 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHH
Confidence 46899997777774 46889999999999988765 34443
No 86
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=69.26 E-value=8.8 Score=27.72 Aligned_cols=40 Identities=10% Similarity=0.236 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEcc
Q 043556 91 GNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (166)
...++.++++.+ .++++||.|.. ...+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~---~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKA---NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHH---TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHH---CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 456777777775 68999999876 47899999999999884
No 87
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=68.72 E-value=8.1 Score=29.05 Aligned_cols=40 Identities=28% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHh
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLK 48 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~ 48 (166)
+++|+++-.++.|- .+|..|++.||+|+++.-.. .+.+.+
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHh
Confidence 46888886666553 56889999999999998765 344443
No 88
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=68.59 E-value=3.9 Score=30.99 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|+++-.+..| ..++..|+++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 556799999665545 34688899999999988654
No 89
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=68.27 E-value=11 Score=23.77 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=21.8
Q ss_pred CCccEEEecCccc--hHHHHHHHh-------CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (166)
.+||+||.|..++ .+..+.+++ ++|.+.+....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 5789999998764 255554432 57877766543
No 90
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=68.08 E-value=6.6 Score=29.28 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=28.0
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
=+++|+++... ....+++++.++|++|.++.+...
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 05789888775 567899999999999999887653
No 91
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=66.98 E-value=8.5 Score=24.66 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=21.7
Q ss_pred CCccEEEecCccch--HHHHHHHh---------CCceEEEccc
Q 043556 106 EKIDCFIADAYMGW--TMRIAEKM---------KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~~--~~~vA~~l---------~iP~i~~~~~ 137 (166)
.+||+||.|..++. +..+.+++ .+|.+.+...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 57999999987643 55555544 2777776654
No 92
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=66.53 E-value=4.3 Score=29.88 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=22.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|||++. ++.|-+= .+|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 356544 2334443 4689999999999999863
No 93
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=66.45 E-value=4.5 Score=30.85 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=22.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (166)
+||+|+=.+--| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 577777544334 67888999999999998
No 94
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=65.35 E-value=7 Score=29.91 Aligned_cols=37 Identities=5% Similarity=0.056 Sum_probs=27.5
Q ss_pred CEEEEEc--CCCC-CChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIP--APAQ-GHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~--~p~~-GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+||++++ +|.. |--.-+..|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 4777774 2333 4456678999999999 9999988543
No 95
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=64.17 E-value=20 Score=23.70 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchhHHHHHHHHHhhccHH
Q 043556 15 GHVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNELGNKLKKILQVMPGN 92 (166)
Q Consensus 15 GH~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (166)
..=.-++++++++.+. ||+ ++++....+.+.+. .|+....+.++.-+ ..+.
T Consensus 13 ~dK~~~v~~a~~~~~ll~Gf~--l~AT~gTa~~L~e~--------~Gl~v~~v~k~~~e-----------------G~p~ 65 (134)
T 2xw6_A 13 AKKEEMVAFCQRHREVLARFP--LVATGTTGRRIEEA--------TGLTVEKLLSGPLG-----------------GDQQ 65 (134)
T ss_dssp GGHHHHHHHHHHTHHHHTTSC--EEECHHHHHHHHHH--------HCCCCEECSCGGGT-----------------HHHH
T ss_pred ccHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHh--------hCceEEEEEecCCC-----------------Ccch
Confidence 3446689999999998 996 67888777776652 26666555322100 1123
Q ss_pred HHHHHHHHhhcCCCCccEEE--ecCc--c------chHHHHHHHhCCceEEEccccHHH
Q 043556 93 LEELIEEINEKEDEKIDCFI--ADAY--M------GWTMRIAEKMKLRRGVVWPSSAAS 141 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI--~D~~--~------~~~~~vA~~l~iP~i~~~~~~~~~ 141 (166)
+-++++. .++|+|| .|++ . ......|-.++||+++-..+.-+.
T Consensus 66 I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~latA~a~ 118 (134)
T 2xw6_A 66 MGARVAE------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMAAEAL 118 (134)
T ss_dssp HHHHHHT------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHHHHHHH
T ss_pred HHHHHHC------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHHHHHHH
Confidence 4444442 6899999 4522 1 124678999999998755444433
No 96
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=63.94 E-value=28 Score=25.28 Aligned_cols=29 Identities=7% Similarity=-0.044 Sum_probs=20.8
Q ss_pred CCccEEEecCccch-HHHHHHHhCCceEEE
Q 043556 106 EKIDCFIADAYMGW-TMRIAEKMKLRRGVV 134 (166)
Q Consensus 106 ~~~d~iI~D~~~~~-~~~vA~~l~iP~i~~ 134 (166)
.++|+||.-++... ...+.+.+++|++..
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 47899998887643 445667789999875
No 97
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=63.58 E-value=16 Score=27.19 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=24.1
Q ss_pred CCCCEEEEEc-CCCCCChHHH--HHHHHHHHHCCCEEEEEe
Q 043556 1 MSNPHVLVIP-APAQGHVIPL--LEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 1 ~~~~~il~~~-~p~~GH~~P~--l~la~~L~~rGh~Vt~~t 38 (166)
|+.+||+++- .|-.+.++-. -.+.+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5677887764 3444444432 346678889999999974
No 98
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=63.26 E-value=12 Score=23.66 Aligned_cols=33 Identities=12% Similarity=0.339 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++|+++- .|.+- ..+++.|.++|++|+++...
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 36788872 36554 35789999999999998764
No 99
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=63.22 E-value=24 Score=23.89 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchhHHHHHHHHHhhccHHH
Q 043556 16 HVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNELGNKLKKILQVMPGNL 93 (166)
Q Consensus 16 H~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (166)
.=.-++++|+++.+. ||+ ++++....+.+.+. .|+....+.++. ++ ..+.+
T Consensus 22 dK~~~v~~ak~~~~ll~Gf~--l~AT~gTa~~L~e~--------~Gl~v~~v~k~~-eG----------------G~p~I 74 (152)
T 1b93_A 22 CKQMLMSWVERHQPLLEQHV--LYATGTTGNLISRA--------TGMNVNAMLSGP-MG----------------GDQQV 74 (152)
T ss_dssp GHHHHHHHHHHTHHHHTTSE--EEEETTHHHHHHHH--------HCCCCEEECCGG-GT----------------HHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHH--------hCceeEEEEecC-CC----------------CCchH
Confidence 346789999999998 997 56677666666552 266666553221 10 11234
Q ss_pred HHHHHHHhhcCCCCccEEE--ecCcc--c------hHHHHHHHhCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFI--ADAYM--G------WTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI--~D~~~--~------~~~~vA~~l~iP~i~~~~~~ 138 (166)
-++++. .++|+|| .|++. + .....|-.+|||+++-..+.
T Consensus 75 ~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~latA 123 (152)
T 1b93_A 75 GALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATA 123 (152)
T ss_dssp HHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHHHH
T ss_pred HHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHHHH
Confidence 444443 6899999 45212 2 13557999999998754433
No 100
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=62.91 E-value=16 Score=22.34 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCccEEEecCccch--HHHHHH----HhCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMGW--TMRIAE----KMKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~----~l~iP~i~~~~~~ 138 (166)
++.++.+.+ .+||+||.|..++. +..+.+ ..++|.+.+....
T Consensus 36 ~~al~~~~~---~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 36 NEAVEMVEE---LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHHT---TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHHhh---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 444444442 57999999987643 444443 3468877766543
No 101
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=62.29 E-value=4.9 Score=27.89 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=15.5
Q ss_pred HHHHHHHHHCCCEEEEE
Q 043556 21 LEFSQCLANHGVRVTFV 37 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~ 37 (166)
+.+|..|+++|++|+++
T Consensus 15 L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 67889999999999997
No 102
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=61.80 E-value=7.5 Score=28.30 Aligned_cols=20 Identities=15% Similarity=0.316 Sum_probs=17.6
Q ss_pred HHHHHHHHHCCCEEEEEeCC
Q 043556 21 LEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~ 40 (166)
..+|++|++||++|+++...
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 46799999999999999865
No 103
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=61.72 E-value=6.1 Score=29.17 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 35789888665555 35688999999999998654
No 104
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.51 E-value=22 Score=23.93 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|+++- +.|-+ =..++++|.++|++|+.+.-.
T Consensus 1 M~~~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 6555666552 33432 357889999999999988754
No 105
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=61.19 E-value=3.3 Score=30.68 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=25.9
Q ss_pred CCccEEE-ecCccc-hHHHHHHHhCCceEEEccccH
Q 043556 106 EKIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~~~ 139 (166)
..||+|| .|+-.- -+..-|.++|||+|.+.=+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 4578665 888764 477889999999999865544
No 106
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=60.84 E-value=14 Score=27.43 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=31.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
++||++..=-|. +---+..|.+.|.+ +|+|+++.+...+..
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 578888887765 55567788888877 899999999876544
No 107
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=60.82 E-value=17 Score=26.33 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+.++++++.++.| -=..++++|+++|++|.++...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 445678888887743 2368899999999999887443
No 108
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=60.70 E-value=3.1 Score=29.82 Aligned_cols=33 Identities=9% Similarity=0.064 Sum_probs=25.1
Q ss_pred CccEEE-ecCccc-hHHHHHHHhCCceEEEccccH
Q 043556 107 KIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 107 ~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~~~ 139 (166)
.||++| .|+-.- -+..-|.++|||+|.+.=+.+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn~ 149 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNN 149 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCCC
Confidence 577655 888764 477789999999999875543
No 109
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=60.66 E-value=26 Score=25.12 Aligned_cols=41 Identities=22% Similarity=0.273 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCCC-----------ChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQG-----------HVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~G-----------H~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|.+.||+++-....+ ...=+......|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 545688888775322 33556666677888999999998754
No 110
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=60.46 E-value=53 Score=24.93 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=30.6
Q ss_pred EEEEEc-CCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 5 HVLVIP-APAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 5 ~il~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+|+++. -+|.|=-.-...+|..|+++|.+|-++..+.
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 455443 3667888999999999999999999999887
No 111
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=60.37 E-value=12 Score=26.59 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.+.++++.++.| -=..++++|+++|++|.++.-
T Consensus 6 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 4567777776643 236789999999999988754
No 112
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.29 E-value=11 Score=27.55 Aligned_cols=37 Identities=24% Similarity=0.342 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 335578888887753 2357899999999999877643
No 113
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=60.21 E-value=4.6 Score=32.63 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|+||+++=.+.-| +.+++.|.++|++||++...+
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 6789988765544 567899999999999998654
No 114
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=59.37 E-value=19 Score=25.76 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 91 GNLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 91 ~~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
..++++++...+.. ...+.+||+|--...+...|+++|||+..+.+..
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~ 62 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKT 62 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhh
Confidence 34677777654321 1256788998654567889999999999876643
No 115
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.11 E-value=14 Score=28.00 Aligned_cols=58 Identities=19% Similarity=0.172 Sum_probs=32.1
Q ss_pred CccEEEecCccch--HHHHHHHhCCceEEEccccHHHHHHHhccchhhhCCCcCCCCCcc
Q 043556 107 KIDCFIADAYMGW--TMRIAEKMKLRRGVVWPSSAASVALCFRIPKLIDDGIISSDGNYQ 164 (166)
Q Consensus 107 ~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 164 (166)
+++-+|.|+|+.. ...+|.++|..+|.+=..+.....+..-..++.+.|.+++..+|.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~~~~~~~~~~ 300 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDGLIDKARSYE 300 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---------CCEE
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHccCCcccceee
Confidence 4567899999854 467889999999998888722112223333455666666555454
No 116
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=59.03 E-value=3.5 Score=30.50 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=24.6
Q ss_pred CccEEE-ecCccc-hHHHHHHHhCCceEEEcccc
Q 043556 107 KIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 107 ~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~~ 138 (166)
.||+|| .|+..- -+..-|.++|||+|.+.=+.
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 578665 888764 46778999999999986443
No 117
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=58.28 E-value=7.4 Score=27.49 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=30.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+|++..-+|.|=-.-...||..|+++|.+|.++=...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6777655666777899999999999999999886543
No 118
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=58.06 E-value=23 Score=22.99 Aligned_cols=42 Identities=7% Similarity=0.004 Sum_probs=30.7
Q ss_pred CEEEEEcCCC---CCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 4 PHVLVIPAPA---QGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 4 ~~il~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
.+++++-..+ ......-+.+|...++.||+|+++-..+-...
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~ 60 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXL 60 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHH
Confidence 4666555554 45667888999999999999998877654433
No 119
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=57.41 E-value=21 Score=24.32 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHH-HHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLE-FSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~-la~~L~~rGh~Vt~~t~~~ 41 (166)
|..++|+++-....|+..-+.+ +++.|.+.|++|+++.-..
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 5556888887776787655544 4556667899999886544
No 120
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=57.15 E-value=8.7 Score=26.62 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=25.9
Q ss_pred CCC-CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSN-PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~-~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|++ +.|+++...+ |+..-...++..|+++|++|..+--
T Consensus 1 me~g~~vv~lHG~~-~~~~~~~~~~~~l~~~g~~vi~~D~ 39 (258)
T 3dqz_A 1 MERKHHFVLVHNAY-HGAWIWYKLKPLLESAGHRVTAVEL 39 (258)
T ss_dssp --CCCEEEEECCTT-CCGGGGTTHHHHHHHTTCEEEEECC
T ss_pred CCCCCcEEEECCCC-CccccHHHHHHHHHhCCCEEEEecC
Confidence 666 4555555544 5555577899999999999887753
No 121
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=56.76 E-value=8.3 Score=29.82 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++.+|+++-.+. -=+..|..|+++|++|+++=..
T Consensus 1 m~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 6777888875553 2456788999999999998654
No 122
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=56.67 E-value=16 Score=26.36 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+.++++++.++.| + =..++++|+++|++|.+....
T Consensus 1 M~~~k~vlVTGas~g-I--G~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 1 MEQNKCALVTGSSRG-V--GKAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp --CCCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEecCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 666778888887742 2 357899999999999986443
No 123
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=56.15 E-value=13 Score=24.48 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=26.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+++++..+. =+.|++.+++.|.++|.+|+++ ..
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 3566655443 5899999999999999999998 54
No 124
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=56.05 E-value=24 Score=22.07 Aligned_cols=32 Identities=13% Similarity=0.057 Sum_probs=20.8
Q ss_pred CCccEEEecCccc--hHHHHHHHh-------CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 4689999998664 244444433 5788777654
No 125
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=55.83 E-value=42 Score=25.53 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=23.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|.++||+|+- --+.-..+.+.|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 4458999982 223344567888899999986654
No 126
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=55.81 E-value=20 Score=29.44 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=31.9
Q ss_pred CCEEEEEcCCCCCCh---HHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 3 NPHVLVIPAPAQGHV---IPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~~p~~GH~---~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
++|..|++.+-.|-+ .-.-.+++.|.+||++||.+=-+++
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpy 44 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPY 44 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcc
Confidence 468888888765544 7888999999999999999765543
No 127
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=55.71 E-value=32 Score=23.91 Aligned_cols=92 Identities=15% Similarity=0.135 Sum_probs=57.0
Q ss_pred ChHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCCCCCCCcCchhHHHHHHHHHhhccHHH
Q 043556 16 HVIPLLEFSQCLANH--GVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPDGMEPWEDRNELGNKLKKILQVMPGNL 93 (166)
Q Consensus 16 H~~P~l~la~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (166)
.=.-++++|++|.+. ||+ ++++....+.+... .|+....+..+. ++ ..+.+
T Consensus 38 dK~~lv~~ak~~~~lL~Gf~--L~AT~gTa~~L~e~--------~Gl~v~~v~k~~-eG----------------G~pqI 90 (178)
T 1vmd_A 38 RKRDLLEWVSFNLGTLSKHE--LYATGTTGALLQEK--------LGLKVHRLKSGP-LG----------------GDQQI 90 (178)
T ss_dssp GHHHHHHHHHHSHHHHTTSE--EEECHHHHHHHHHH--------HCCCCEECSCGG-GT----------------HHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCE--EEEchHHHHHHHHH--------hCceeEEEeecC-CC----------------CCchH
Confidence 336789999999998 996 66787777666552 266665553221 10 11234
Q ss_pred HHHHHHHhhcCCCCccEEE--ecCcc--c------hHHHHHHHhCCceEEEccccHH
Q 043556 94 EELIEEINEKEDEKIDCFI--ADAYM--G------WTMRIAEKMKLRRGVVWPSSAA 140 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI--~D~~~--~------~~~~vA~~l~iP~i~~~~~~~~ 140 (166)
-++++. .++|+|| .|++. + .....|-.+|||+++-..+.-+
T Consensus 91 ~d~I~~------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~TnlatA~A 141 (178)
T 1vmd_A 91 GAMIAE------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRSTADF 141 (178)
T ss_dssp HHHHHT------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHHHHHH
T ss_pred HHHHHC------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHHHHHH
Confidence 444442 6899999 45211 1 2456899999999875444433
No 128
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.56 E-value=17 Score=23.85 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..+|+++-. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 467888743 4443 457889999999999987643
No 129
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=55.42 E-value=14 Score=27.62 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.||.|+-.+-.|. .+++.|+++||+|+++-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 4799998888774 68999999999999864
No 130
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=55.42 E-value=23 Score=22.75 Aligned_cols=41 Identities=12% Similarity=0.022 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-------hCCceEEEccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-------MKLRRGVVWPS 137 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-------l~iP~i~~~~~ 137 (166)
.+.++.+.+ .+||+||.|...+ .+..+.++ -++|++.+...
T Consensus 41 ~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 41 REAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 444444432 5799999998653 24444433 35787776643
No 131
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=55.39 E-value=12 Score=28.92 Aligned_cols=39 Identities=15% Similarity=0.171 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCCC-C---hHHHHHHHHHH-HHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQG-H---VIPLLEFSQCL-ANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~G-H---~~P~l~la~~L-~~rGh~Vt~~t~ 39 (166)
|.++||+++..+-.+ | +..-..++++| .++||+|+.+-.
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 777899998664333 2 34568889999 999999998853
No 132
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=55.04 E-value=29 Score=21.19 Aligned_cols=42 Identities=10% Similarity=0.133 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHh-----CCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|...+ .+..+.+++ ++|.+.+....
T Consensus 37 ~~~~~~~~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPD---VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGG---CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhc---CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 444444432 5789999998654 344444432 57877765543
No 133
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=54.80 E-value=3 Score=30.41 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=25.9
Q ss_pred CccEEE-ecCccc-hHHHHHHHhCCceEEEccccHH
Q 043556 107 KIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPSSAA 140 (166)
Q Consensus 107 ~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~~~~ 140 (166)
.||+|| .|+..- -+..-|.++|||+|.+.=+.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn~d 192 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCN 192 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSSSC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCCCC
Confidence 478766 888664 4677899999999998755543
No 134
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=54.48 E-value=16 Score=27.64 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=26.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.||.|+-.++.| |-.+|+.|+++|++|+..=.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 578888888766 55799999999999998754
No 135
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=54.34 E-value=19 Score=22.33 Aligned_cols=32 Identities=6% Similarity=-0.010 Sum_probs=25.0
Q ss_pred CChHHHHHHHHHHHHC-CC-EEEEEeCCcchhHH
Q 043556 15 GHVIPLLEFSQCLANH-GV-RVTFVNSEYNHQRV 46 (166)
Q Consensus 15 GH~~P~l~la~~L~~r-Gh-~Vt~~t~~~~~~~~ 46 (166)
......+.++..+++. || +|+++-..+.....
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 4456779999999998 99 99998877655443
No 136
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=54.29 E-value=4.5 Score=30.61 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=24.3
Q ss_pred CccEEE-ecCccc-hHHHHHHHhCCceEEEcccc
Q 043556 107 KIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 107 ~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~~ 138 (166)
.||+|| .|...- -+..-|.++|||+|.+.-+.
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 151 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 151 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCC
Confidence 477655 888764 46778999999999986443
No 137
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.20 E-value=23 Score=25.12 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|-+.+.++++.++.| -=..++++|+++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 445677888877743 2357899999999999887653
No 138
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=53.84 E-value=23 Score=26.34 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC-C-CEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH-G-VRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r-G-h~Vt~~t~~ 40 (166)
|.+++|+++..+.. .++++.|++. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 77889999855543 4789999876 6 888777654
No 139
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=53.82 E-value=18 Score=26.32 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888887753 2357899999999999887644
No 140
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.70 E-value=12 Score=25.92 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=22.8
Q ss_pred CCC-CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSN-PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~-~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++ ++|+++- + .|.+- ..+++.|.++|++|+.+.-.
T Consensus 1 M~~m~~ilItG-a-tG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLIG-A-SGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEET-C-CHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCCCCEEEEEc-C-CchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 654 4655543 2 23332 57889999999999998754
No 141
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=53.66 E-value=32 Score=25.59 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEEccccHHHHHHH
Q 043556 91 GNLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVVWPSSAASVALC 145 (166)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~~~~~~~~~~ 145 (166)
..+.++++.+++ .+..||+++..... +..+|++.|++.+.+-+.+...+.++
T Consensus 224 ~~l~~l~~~ik~---~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m 277 (291)
T 1pq4_A 224 QELKQLIDTAKE---NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNL 277 (291)
T ss_dssp HHHHHHHHHHHT---TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHH
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHH
Confidence 346667776664 68999999987653 57799999999998877765444444
No 142
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=53.63 E-value=16 Score=27.41 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~ 47 (166)
.++|+++-.++.| ..+|..|++.||+|+++..+...+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 4678888666655 457889999999999993333334443
No 143
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=53.46 E-value=32 Score=21.39 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-------hCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-------MKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-------l~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|.... .+..+.++ -++|++.+....
T Consensus 40 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 40 AQALEQVAR---RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHHH---SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 444444443 5799999998653 24444433 357777766544
No 144
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=53.32 E-value=21 Score=26.74 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 3589999776666 56888999999999987654
No 145
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=53.22 E-value=9.1 Score=29.18 Aligned_cols=22 Identities=14% Similarity=0.181 Sum_probs=18.5
Q ss_pred HHHHHHHHHCCCEEEEEeCCcc
Q 043556 21 LEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
..+|+.+..||++||+++.+..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 4678999999999999987543
No 146
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=52.76 E-value=20 Score=28.74 Aligned_cols=38 Identities=5% Similarity=0.050 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCCCC--hHHHHHHHHH--HHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGH--VIPLLEFSQC--LANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH--~~P~l~la~~--L~~rGh~Vt~~t~~ 40 (166)
++||+++.....+| -.-+..+++. |.++||+|++++..
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 46899998776555 3557788999 67789999999864
No 147
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=52.13 E-value=75 Score=25.93 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHHHHCCCEEEEEeCCcc-hhHHHh--------------hhccCCCCCCCeeeeecCCCCCCCcCchhHHHHHHH
Q 043556 20 LLEFSQCLANHGVRVTFVNSEYN-HQRVLK--------------SLEGKNNLEEKIRLVSIPDGMEPWEDRNELGNKLKK 84 (166)
Q Consensus 20 ~l~la~~L~~rGh~Vt~~t~~~~-~~~~~~--------------~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 84 (166)
.+.+++.|.+-|.+|..+.+... .+..+. +. +.++...-|+.+........+..+...
T Consensus 347 ~~~l~~~l~ElGm~vv~~~t~~~~~~~~~~~~~~p~~~~~~d~~~~-------~~~~~~~~~~~~~~~~~~e~~~~l~~~ 419 (533)
T 1mio_A 347 SHTYMNMLKSFGVDSLVAGFEFAHRDDYEGREVIPTIKIDADSKNI-------PEITVTPDEQKYRVVIPEDKVEELKKA 419 (533)
T ss_dssp HHHHHHHHHHHTCEEEEEEESSCCHHHHHCGGGTTTCCCCSSCCCC-------CCCCCCCCSSSCCCSSCTHHHHHHHGG
T ss_pred HHHHHHHHHHCCCEEEEEEeccCcchhhhhhccCcccccccccccc-------cccccccchhhhcccccHHHHHHHHhc
Q ss_pred ---------HHhhcc-----------HHHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceE
Q 043556 85 ---------ILQVMP-----------GNLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRG 132 (166)
Q Consensus 85 ---------~~~~~~-----------~~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i 132 (166)
+...+. ..++++++. .+||++|.. .....+|+++|||.+
T Consensus 420 g~~~~~y~~~~~~~~~~~~i~~d~d~~el~~~i~~------~~pDl~ig~---~~~~~~a~k~gIP~~ 478 (533)
T 1mio_A 420 GVPLSSYGGMMKEMHDGTILIDDMNHHDMEVVLEK------LKPDMFFAG---IKEKFVIQKGGVLSK 478 (533)
T ss_dssp GCCBTCCCCGGGTSCTTEEEEESCBHHHHHHHHHH------HCCSEEEEC---HHHHHHHHHTTCEEE
T ss_pred ccccccccchhhccCCCcEEEeCCCHHHHHHHHHh------cCCCEEEcc---cchhHHHHhcCCCEE
No 148
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=52.02 E-value=31 Score=23.92 Aligned_cols=35 Identities=11% Similarity=0.267 Sum_probs=23.8
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 6 VLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 6 il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+++..+...+-....++++.++++|++|.++.-.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 44555555456667778888888888888876543
No 149
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=51.98 E-value=13 Score=27.58 Aligned_cols=44 Identities=9% Similarity=0.065 Sum_probs=36.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHH--------HHHC-CCEEEEEeCCcchhHH
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQC--------LANH-GVRVTFVNSEYNHQRV 46 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~--------L~~r-Gh~Vt~~t~~~~~~~~ 46 (166)
+.+|++.+.++-.|-....-++.. |.++ |++|..+...-..+.+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 468999999999999999888877 9999 9999998875444443
No 150
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=51.77 E-value=13 Score=27.29 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=25.9
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|...+|+++-.+..| ..+|+.|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 345689988544444 46889999999999997654
No 151
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.55 E-value=22 Score=24.98 Aligned_cols=33 Identities=6% Similarity=0.026 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.+.++++.++.| -=..++++|+++|++|.++.-
T Consensus 3 ~k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 3 SGKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp CEEEEEETTTSH---HHHHHHHHHHHTTEEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 356667766542 236789999999999988753
No 152
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=51.51 E-value=17 Score=23.18 Aligned_cols=42 Identities=10% Similarity=0.082 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCCCCh--HHHHHHHHHHHHCC--CEEEEEeCCcchh
Q 043556 3 NPHVLVIPAPAQGHV--IPLLEFSQCLANHG--VRVTFVNSEYNHQ 44 (166)
Q Consensus 3 ~~~il~~~~p~~GH~--~P~l~la~~L~~rG--h~Vt~~t~~~~~~ 44 (166)
.++++|+-+.+.--. +-.+.+|....++| |+|+++--....+
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 467777777754222 44678889999999 8999988776544
No 153
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=51.41 E-value=3.2 Score=30.03 Aligned_cols=43 Identities=19% Similarity=0.235 Sum_probs=29.8
Q ss_pred CccE-EEecCccc-hHHHHHHHhCCceEEEccccHHHHHHHhccc
Q 043556 107 KIDC-FIADAYMG-WTMRIAEKMKLRRGVVWPSSAASVALCFRIP 149 (166)
Q Consensus 107 ~~d~-iI~D~~~~-~~~~vA~~l~iP~i~~~~~~~~~~~~~~~~~ 149 (166)
.||+ ||.|+-.- -+..-|.++|||+|.+.=+.+..-.+.+.+|
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn~~p~~Vdy~IP 193 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIP 193 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSSSCCSSCSEECC
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCcCCCcccceEee
Confidence 5775 55998764 4677899999999998866554333334443
No 154
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=51.41 E-value=33 Score=24.23 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+.++++.++.| -=..++++|+++|++|.++...
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 4578888888754 3467899999999999886543
No 155
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=51.38 E-value=32 Score=21.50 Aligned_cols=33 Identities=9% Similarity=-0.002 Sum_probs=21.4
Q ss_pred CCccEEEecCccc--hHHHHHHHh----CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM----KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l----~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.+++ .+|.+.+....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 4789999998664 344444443 57877765543
No 156
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=51.38 E-value=32 Score=21.93 Aligned_cols=42 Identities=10% Similarity=0.083 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|.... .+..+.++ -++|+|.+....
T Consensus 48 ~~a~~~l~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 48 TQALQLLAS---REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHc---CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 444444443 5799999998654 24444333 357877766544
No 157
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=51.37 E-value=53 Score=22.18 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|+..+|+++.+++.. ..-+......|...|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345789999887654 3455556677888999999998764
No 158
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=51.25 E-value=21 Score=25.26 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 456677776642 2357899999999999887643
No 159
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.13 E-value=4.8 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=24.0
Q ss_pred CccEE-EecCccc-hHHHHHHHhCCceEEEcccc
Q 043556 107 KIDCF-IADAYMG-WTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 107 ~~d~i-I~D~~~~-~~~~vA~~l~iP~i~~~~~~ 138 (166)
.||++ |.|+-.- -+..-|.++|||.|.+.-+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 46765 4898764 46778999999999977443
No 160
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=51.07 E-value=38 Score=20.74 Aligned_cols=33 Identities=15% Similarity=0.055 Sum_probs=20.8
Q ss_pred CCccEEEecCccc--hHHHHHHH-------hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-------MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-------l~iP~i~~~~~~ 138 (166)
.+||+||.|.... .+..+.++ -++|++.+....
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 5799999998653 24443322 267888776543
No 161
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=51.03 E-value=33 Score=23.96 Aligned_cols=35 Identities=20% Similarity=0.028 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGH----VIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH----~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++|.++.... +. ..-..+|++.|+++|+. +++..
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~--lv~GG 51 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWT--LVWGG 51 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCE--EEECC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCE--EEECC
Confidence 46899988766 43 34567888899999986 45553
No 162
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=51.02 E-value=10 Score=28.99 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCCC--C---hHHHHHHHHHHHHCCCEEEEEe
Q 043556 1 MSNPHVLVIPAPAQG--H---VIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 1 ~~~~~il~~~~p~~G--H---~~P~l~la~~L~~rGh~Vt~~t 38 (166)
|++.||+++.. |.| | +..-..+++.|.+.||+|..+.
T Consensus 1 M~kkkv~vl~G-G~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFG-GNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEEC-CCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 88889988844 433 3 3445578899999999999873
No 163
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=50.94 E-value=23 Score=24.80 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777776643 2357899999999998887644
No 164
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=50.94 E-value=33 Score=21.85 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEccccH
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSSA 139 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~~ 139 (166)
.+.++.+.+ .+||+||.|.... .+..+.++ -++|++.+....-
T Consensus 41 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 41 LDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 444544442 4689999997653 24443333 2578877765443
No 165
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=50.87 E-value=34 Score=24.90 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCC-CChH---HHHHHHHHHHHCCCEEEEEeCCc
Q 043556 2 SNPHVLVIPAPAQ-GHVI---PLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 2 ~~~~il~~~~p~~-GH~~---P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
-+++|+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 0568888875432 2222 34679999999999999987663
No 166
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=50.79 E-value=27 Score=24.94 Aligned_cols=46 Identities=15% Similarity=0.249 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
.++++++...+.....+.+||+|---..+...|+++|||+..+.+.
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~ 63 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHE 63 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCcc
Confidence 4566666654210125678888865445678999999999987553
No 167
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=50.67 E-value=16 Score=29.17 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEc
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~ 135 (166)
.+++++++ .++|++|.+ .....+|+++|||.+.+.
T Consensus 366 ~le~~i~~------~~pDllig~---~~~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARA------GQAQLVIGN---SHALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHH------HTCSEEEEC---TTHHHHHHHTTCCEEECS
T ss_pred HHHHHHHh------cCCCEEEEC---hhHHHHHHHcCCCEEEec
No 168
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=50.64 E-value=28 Score=21.61 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=20.9
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+....
T Consensus 48 ~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 3689999998664 244444332 47877765543
No 169
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=50.50 E-value=9.3 Score=28.62 Aligned_cols=33 Identities=18% Similarity=0.075 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+++|+++-.++.|- .++..|+ +|++|+++....
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 47899996666654 5688888 999999988664
No 170
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=50.32 E-value=34 Score=21.14 Aligned_cols=33 Identities=9% Similarity=-0.031 Sum_probs=20.0
Q ss_pred CCccEEEecCccc-------hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG-------WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~-------~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|.... .+..+.++ -++|++.+....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4689999987543 23333332 257887776543
No 171
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=50.25 E-value=13 Score=28.10 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+||.|+-.+..| ..+++.|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3678888666555 46789999999999998754
No 172
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=50.13 E-value=3.8 Score=30.10 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=24.3
Q ss_pred CCccEEE-ecCccc-hHHHHHHHhCCceEEEccc
Q 043556 106 EKIDCFI-ADAYMG-WTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI-~D~~~~-~~~~vA~~l~iP~i~~~~~ 137 (166)
..||+|| .|+..- -+..-|.++|||+|.+.-+
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 146 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALCDS 146 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECCCS
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEecC
Confidence 3578665 888764 4677899999999998654
No 173
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=49.88 E-value=31 Score=20.71 Aligned_cols=33 Identities=15% Similarity=0.008 Sum_probs=20.9
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 3689999998664 244444432 57777765543
No 174
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=49.78 E-value=7.5 Score=27.51 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 445688888654444 46788999999999985443
No 175
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=49.72 E-value=23 Score=23.68 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=26.0
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccch--HHHHHHH-----hCCceEEEcccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~-----l~iP~i~~~~~~ 138 (166)
..+.++.+.+ .+||+||.|..++. +..+.++ -++|++.+....
T Consensus 40 ~~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 40 KDEALKLAGA---EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHHTT---SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHHhh---CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3445555542 57999999987642 4444333 357877766543
No 176
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=49.64 E-value=27 Score=21.68 Aligned_cols=43 Identities=16% Similarity=0.095 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc---hHHHHHHH----hCCceEEEccccH
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG---WTMRIAEK----MKLRRGVVWPSSA 139 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~---~~~~vA~~----l~iP~i~~~~~~~ 139 (166)
.+.++.+.+ .+||+||.|.... .+..+.++ .++|++.+....-
T Consensus 44 ~~a~~~~~~---~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 44 EEAVRCAPD---LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHH---HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHh---CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 444444433 4689999997543 24444433 4788888765543
No 177
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=49.60 E-value=37 Score=21.55 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.++.++.+.+ .+||+||.|.-.. .+..+.++ -++|++.+....
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 4566666543 5799999998653 24444443 357877766544
No 178
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=49.59 E-value=36 Score=21.42 Aligned_cols=32 Identities=6% Similarity=0.036 Sum_probs=20.4
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 4789999998654 344444432 4777776543
No 179
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=49.45 E-value=34 Score=21.35 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=24.0
Q ss_pred HHHHHHHhhcCCCCccEEEecCccch--HHHHHHHh-----CCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKM-----KLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l-----~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|. ... +..+.+++ ++|++.+....
T Consensus 38 ~~a~~~l~~---~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 38 QEAFTFLRR---EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHTT---SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHhc---cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 444444432 5789999998 542 33333332 58888776543
No 180
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=49.04 E-value=28 Score=26.11 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=22.3
Q ss_pred CCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 106 EKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
-+||+||..........--++.|||++.+....
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~~ 147 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNPED 147 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCCS
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCCC
Confidence 478999986543223344467899999986543
No 181
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=48.88 E-value=23 Score=26.18 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=23.4
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|...+.++++.++ |-+= ..++++|+++||+|+.+.-
T Consensus 2 M~~~~~vlVTGat-G~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVTGGA-GYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEETTT-SHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEecCC-cHHH--HHHHHHHHHCCCcEEEEec
Confidence 4433344455443 3332 5789999999999998764
No 182
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=48.83 E-value=30 Score=25.05 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|-+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 1 Ml~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASGG---IGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEECC
Confidence 445678888887743 2357899999999999887643
No 183
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=48.65 E-value=20 Score=26.03 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=20.2
Q ss_pred CCCCEEEEE-cCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 1 MSNPHVLVI-PAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 1 ~~~~~il~~-~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
|++.+++++ +.|- ==..-+-.....++++|++|++++
T Consensus 1 ~~~~~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 1 MSGLHILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp -CCCSEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEE
Confidence 554444444 3333 112334445567778999998874
No 184
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=48.42 E-value=25 Score=26.66 Aligned_cols=30 Identities=13% Similarity=-0.092 Sum_probs=21.4
Q ss_pred CccEEEecCccc-hHHHHHHHhCCceEEEcc
Q 043556 107 KIDCFIADAYMG-WTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 107 ~~d~iI~D~~~~-~~~~vA~~l~iP~i~~~~ 136 (166)
+||+||...... ....+.+++|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 789999765432 234466789999999854
No 185
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=48.36 E-value=28 Score=26.22 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=29.5
Q ss_pred CCEEEEEcC-CCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPA-PAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~-p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.+||..+.. +|-|=-.....||..|+++|.+|-++=.+.
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 456766652 333455999999999999999999986553
No 186
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=48.32 E-value=25 Score=25.57 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=24.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 66778776644 2 357899999999999987643
No 187
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=48.27 E-value=28 Score=21.69 Aligned_cols=36 Identities=6% Similarity=0.151 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++|++++..|.|+-.-.-.+-+.+.++|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 357999999999999666677778888998766543
No 188
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=48.23 E-value=31 Score=24.85 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467788877753 2368899999999999887753
No 189
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=48.13 E-value=45 Score=20.41 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=21.8
Q ss_pred CCccEEEecCccc--hHHHHHHHh-------CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (166)
.++|+||.|..++ .+..+.+++ ++|.+.+....
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 4689999998764 355555442 47777766543
No 190
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=48.12 E-value=31 Score=20.91 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=20.9
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.++ -++|.+.+....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 3689999998654 24444433 357877775543
No 191
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=48.09 E-value=11 Score=28.86 Aligned_cols=39 Identities=8% Similarity=0.226 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCCC-C---hHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQG-H---VIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~G-H---~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|.++||+++..+..+ | +..-..+++.|.++||+|..+..
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 777899988754322 2 23447788999999999998853
No 192
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=48.04 E-value=43 Score=20.62 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=20.8
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.++ -++|.+.+....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 4789999998654 24444333 357877765543
No 193
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=47.97 E-value=18 Score=26.17 Aligned_cols=19 Identities=26% Similarity=0.459 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCEEEEEeC
Q 043556 21 LEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~ 39 (166)
..+|++|+++|++|+++..
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp HHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEC
Confidence 5788999999999999864
No 194
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=47.90 E-value=34 Score=23.26 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=27.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 35555566678888899999999999998877654
No 195
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=47.81 E-value=29 Score=25.24 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 4 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 4 TGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 4577888887753 2357899999999999887643
No 196
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=47.55 E-value=29 Score=24.63 Aligned_cols=47 Identities=19% Similarity=0.154 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 91 GNLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 91 ~~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
..++++++.+.+.. ...+.+||+|---..+...|+++|||+..+-..
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~ 66 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRK 66 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCcc
Confidence 34666776654321 124677888753334678999999999987653
No 197
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=47.55 E-value=15 Score=27.82 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCCCC-----hHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGH-----VIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH-----~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|++.||+++.. ++|. +..-..++++|.+.||+|..+..
T Consensus 1 m~~~~v~vl~g-G~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 1 MNRIKVAILFG-GCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp -CCEEEEEEEE-CSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCcEEEEEeC-CCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 77789988874 4552 22567789999999999998754
No 198
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=47.53 E-value=43 Score=20.09 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=21.2
Q ss_pred CCccEEEecCccc--hHHHHHHHh----CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM----KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l----~iP~i~~~~~~ 138 (166)
.+||+||.|.-.+ .+..+.+++ ++|.+.+....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 4689999998654 345554443 57777765543
No 199
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=47.48 E-value=26 Score=24.26 Aligned_cols=38 Identities=21% Similarity=0.373 Sum_probs=27.7
Q ss_pred CEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQ---GHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.+|+++|.=|. -=..+.-+|++.|.++|.+|.|...+-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 45666653221 123689999999999999999988763
No 200
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=47.46 E-value=12 Score=28.97 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 356789888654444 46789999999999988654
No 201
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=47.31 E-value=44 Score=20.06 Aligned_cols=33 Identities=12% Similarity=0.053 Sum_probs=21.2
Q ss_pred CCccEEEecCccc--hHHHHHHH----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~----l~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.++ -++|.+.+....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 4789999998654 24444433 467877765543
No 202
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=47.29 E-value=15 Score=25.23 Aligned_cols=21 Identities=19% Similarity=0.108 Sum_probs=17.7
Q ss_pred HHHHHHHHHCCCEEEEEeCCc
Q 043556 21 LEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..++++|+++||+|+.+.-..
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp HHHHHHHHHTTCEEEEEESCS
T ss_pred HHHHHHHHhCCCEEEEEEcCc
Confidence 578999999999999987543
No 203
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=47.23 E-value=36 Score=20.27 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=21.7
Q ss_pred CCccEEEecCccc--hHHHHHH----HhCCceEEEccccH
Q 043556 106 EKIDCFIADAYMG--WTMRIAE----KMKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~----~l~iP~i~~~~~~~ 139 (166)
.+||+||.|...+ .+..+.+ .-++|.+.+....-
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 3689999998653 2444433 34688887765543
No 204
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=47.12 E-value=18 Score=27.03 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCCCCh---HHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHV---IPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~---~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
++|..|++.+-.|-+ .-.-.+++.|.+||++||.+=-++
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 568888887765444 778889999999999999865444
No 205
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=46.81 E-value=44 Score=19.84 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=20.4
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 4789999998654 344444332 4777776554
No 206
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=46.75 E-value=16 Score=27.85 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
..+|+++-.+--| +.+|..|+++|++|+++=-
T Consensus 11 ~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 11 TRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 4567777654434 6788899999999999853
No 207
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=46.74 E-value=39 Score=24.10 Aligned_cols=32 Identities=13% Similarity=0.246 Sum_probs=23.6
Q ss_pred CEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEE
Q 043556 4 PHVLVIPAPAQGH----VIPLLEFSQCLANHGVRVT 35 (166)
Q Consensus 4 ~~il~~~~p~~GH----~~P~l~la~~L~~rGh~Vt 35 (166)
.+|.+++....+- ..-..+|++.|+++|+.|.
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vV 49 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLV 49 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEE
Confidence 4699997777653 3456788999999997753
No 208
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=46.71 E-value=51 Score=20.56 Aligned_cols=42 Identities=10% Similarity=0.067 Sum_probs=25.3
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccch--HHHHHHH-------hCCceEEEccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEK-------MKLRRGVVWPS 137 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~-------l~iP~i~~~~~ 137 (166)
..+.++.+.+ .+||+||.|..... +..+.++ -++|++.+...
T Consensus 40 ~~~a~~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 40 GAKALYQVQQ---AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHHTT---CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHHhhc---CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 3455555543 57999999986542 4444333 34777776654
No 209
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=46.71 E-value=20 Score=28.43 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=24.2
Q ss_pred EEEcCCC---CCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 7 LVIPAPA---QGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 7 l~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+=|++. -||+.|++.+ +.|++.||++.++...
T Consensus 36 G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 36 GFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp EECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred eeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3444543 3999986655 6899999999998765
No 210
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=46.71 E-value=42 Score=20.41 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHh-------CCceEEEccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPS 137 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (166)
++.++.+.+ .+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 41 ~~a~~~~~~---~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 41 EQGMKIMAQ---NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHHT---SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHHc---CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 444444442 5789999998664 355555543 3566665443
No 211
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=46.63 E-value=42 Score=25.43 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+++||+|+-.|. ...+.-+.|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 4568999987763 3345567788899999876663
No 212
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=46.61 E-value=32 Score=24.36 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|+++.-.
T Consensus 5 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 5 DKAVLITGAAHG---IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777766643 2356889999999999987643
No 213
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=46.58 E-value=40 Score=23.67 Aligned_cols=34 Identities=24% Similarity=0.156 Sum_probs=25.5
Q ss_pred CCEEEEEcCCC---C----CChHHHHHHHHHHHHCCCEEEE
Q 043556 3 NPHVLVIPAPA---Q----GHVIPLLEFSQCLANHGVRVTF 36 (166)
Q Consensus 3 ~~~il~~~~p~---~----GH~~P~l~la~~L~~rGh~Vt~ 36 (166)
..+|.++.... . -...-..+|++.|+++|+.|..
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 34788888643 2 4568899999999999977544
No 214
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=46.50 E-value=27 Score=24.24 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=27.4
Q ss_pred CEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ---GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|+++|.=|. -=..+.-+|++.|.++|.+|.|...+
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 45666654221 12368999999999999999998876
No 215
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=46.42 E-value=6.6 Score=28.99 Aligned_cols=33 Identities=6% Similarity=-0.013 Sum_probs=24.4
Q ss_pred CccEE-EecCccc-hHHHHHHHhCCceEEEccccH
Q 043556 107 KIDCF-IADAYMG-WTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 107 ~~d~i-I~D~~~~-~~~~vA~~l~iP~i~~~~~~~ 139 (166)
.||+| |.|+-.- -+..-|.++|||+|.+.-+.+
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DTn~ 151 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDS 151 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEECTTC
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEcCCC
Confidence 46765 5898764 467789999999999875443
No 216
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=46.36 E-value=34 Score=20.95 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=23.7
Q ss_pred HHHHHHHhhcCCCCccEEEecCccch--HHHHHHH-----hCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMGW--TMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|..... +..+.++ -++|++.+....
T Consensus 41 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 41 VDALELLGG---FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHTT---CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 445555442 57999999986532 3333332 257887776544
No 217
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=46.33 E-value=16 Score=25.69 Aligned_cols=21 Identities=14% Similarity=-0.021 Sum_probs=17.6
Q ss_pred HHHHHHHHHCCCEEEEEeCCc
Q 043556 21 LEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..++++|+++||+|+.+.-..
T Consensus 35 ~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 35 RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp HHHHHHHHHTTCEEEEEESSG
T ss_pred HHHHHHHHhCCCeEEEEECCh
Confidence 478899999999999987553
No 218
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=46.18 E-value=28 Score=25.45 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3577888887754 2357899999999999887643
No 219
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=46.11 E-value=12 Score=30.06 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcCC
Confidence 666789988666555 45788999999999887643
No 220
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=46.06 E-value=39 Score=23.89 Aligned_cols=46 Identities=24% Similarity=0.289 Sum_probs=31.4
Q ss_pred HHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 92 NLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
.++.+++.+.+.. ...+.+||++.--..+...|+++|||+..+.+.
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 3566666654321 124567888876566788999999999987654
No 221
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=46.04 E-value=49 Score=20.17 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=19.2
Q ss_pred CCccEEEecCccch--HHHHHHHh------CCceEEEccc
Q 043556 106 EKIDCFIADAYMGW--TMRIAEKM------KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~~--~~~vA~~l------~iP~i~~~~~ 137 (166)
.+||+||.|..... +..+.+++ ..|.+.+.+.
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 57899999986542 45544432 3455555444
No 222
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=46.00 E-value=32 Score=24.85 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 4 ~~k~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 4 SAKVWLVTGASSG-F--GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4577888877642 2 347899999999999887654
No 223
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=45.97 E-value=15 Score=28.87 Aligned_cols=26 Identities=19% Similarity=0.367 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 14 QGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 14 ~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-||+.|++.+ +.|++.||++.++...
T Consensus 80 lGhlv~l~~l-~~lQ~~G~~~~~lIgD 105 (392)
T 1y42_X 80 VGHLLPLMPL-FWMYLEGYKAFTLIGG 105 (392)
T ss_dssp GGGHHHHHHH-HHHHHHTCEEEEEECT
T ss_pred HHHHHHHHHH-HHHHHcCCcEEEEEcC
Confidence 3999987665 5888889999998754
No 224
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=45.94 E-value=19 Score=27.42 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 17 VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 17 ~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+-++.+|.+.|.++|++|.+++...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999998654
No 225
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=45.85 E-value=43 Score=21.02 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCCCChHH-HHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIP-LLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P-~l~la~~L~~rGh~Vt~~t 38 (166)
+.+|++++..|.|.-.- ...+-+.+.++|.++.+-+
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 35899999999999774 6777788889999876544
No 226
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=45.85 E-value=47 Score=20.21 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCCC-CccEEEecCccc---hHHHHHHHh-----CCceEEEcccc
Q 043556 94 EELIEEINEKEDE-KIDCFIADAYMG---WTMRIAEKM-----KLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~-~~d~iI~D~~~~---~~~~vA~~l-----~iP~i~~~~~~ 138 (166)
.+.++.+.+ . +||+||.|.... .+..+.+++ ++|++.+....
T Consensus 39 ~~a~~~l~~---~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 39 AKAIEMLKS---GAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp HHHHHHHHT---TCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred HHHHHHHHc---CCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 444444432 3 799999997553 244443332 58888876544
No 227
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=45.77 E-value=34 Score=24.93 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+-|+++++.++.| -=..++++|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4589999998875 236788999999999987654
No 228
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=45.26 E-value=28 Score=24.59 Aligned_cols=38 Identities=21% Similarity=0.373 Sum_probs=27.3
Q ss_pred CEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQ---GHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.+|+++|.=+. -=..+.-+|++.|.++|.+|.|...+-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 35666653221 113688999999999999999988763
No 229
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=45.20 E-value=9.6 Score=28.88 Aligned_cols=33 Identities=3% Similarity=0.001 Sum_probs=24.8
Q ss_pred CccEE-EecCccc-hHHHHHHHhCCceEEEccccH
Q 043556 107 KIDCF-IADAYMG-WTMRIAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 107 ~~d~i-I~D~~~~-~~~~vA~~l~iP~i~~~~~~~ 139 (166)
.||+| |.|...- -+..-|.++|||+|.+.-+..
T Consensus 122 ePdllvV~Dp~~d~qAI~EA~~lnIPtIALvDTns 156 (305)
T 3iz6_A 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDS 156 (305)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTS
T ss_pred CCceeEEeCcccchHHHHHHHHcCCCEEEEEcCCC
Confidence 46765 5898764 467789999999999875544
No 230
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=45.15 E-value=35 Score=24.62 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 577888887754 2367899999999999887543
No 231
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=44.90 E-value=17 Score=25.07 Aligned_cols=20 Identities=15% Similarity=0.041 Sum_probs=17.3
Q ss_pred HHHHHHHHHCCCEEEEEeCC
Q 043556 21 LEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~ 40 (166)
..++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 57899999999999998754
No 232
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.86 E-value=39 Score=23.79 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 4 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 4 NEKVALVTGASRG-I--GFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp TTCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4567778877642 2 357899999999999887654
No 233
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=44.73 E-value=35 Score=20.54 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=19.3
Q ss_pred CCccEEEecCccc--hHHHHHHHh-------CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 3689999998664 244444432 5777776543
No 234
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=44.68 E-value=36 Score=24.09 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEeCC
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLAN-HGVRVTFVNSE 40 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~t~~ 40 (166)
.+.+.++++.++ |-+ =..+++.|++ +|++|.++.-.
T Consensus 2 ~~~k~vlITGas-ggI--G~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 2 SGIHVALVTGGN-KGI--GLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCCEEEESSCS-SHH--HHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCCEEEEeCCC-cHH--HHHHHHHHHHhcCCeEEEEeCC
Confidence 345667777665 322 3578999999 99999987654
No 235
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=44.62 E-value=14 Score=27.60 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
..+|+++=.+..| +..|..|+++|++|+++=-.
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3577777655544 67788999999999998544
No 236
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=44.50 E-value=23 Score=25.75 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=23.0
Q ss_pred CC-CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+ +.+|+++-. .|.+- ..+++.|.++||+|+.++-.
T Consensus 1 M~~~~~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLIGA--TGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEEST--TSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEEcC--CcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 65 455655533 23332 46789999999999987654
No 237
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=44.48 E-value=19 Score=26.06 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=23.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+|+++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 67777554444 36789999999999998654
No 238
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=44.35 E-value=29 Score=24.57 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=26.9
Q ss_pred CEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ---GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|+++|.=+. -=..+.-+|++.|.++|.+|.|...+
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 35666653221 12378899999999999999998876
No 239
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=44.29 E-value=15 Score=28.78 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=21.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~ 41 (166)
|++ ||+++=.+ .+.+ ..|+.|+++ +++||++...+
T Consensus 1 M~K-~VvIIGgG-~aGl----~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIGGG-VGGI----ATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEECSS-HHHH----HHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEECCC-HHHH----HHHHHHhccCcCCeEEEEcCCC
Confidence 653 78777543 3443 445666654 49999998764
No 240
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=43.92 E-value=36 Score=28.25 Aligned_cols=43 Identities=19% Similarity=0.347 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCC--CCCC
Q 043556 18 IPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPD--GMEP 71 (166)
Q Consensus 18 ~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~ 71 (166)
.-++++++.|.+.|++ ++++....+.++.. ||.+..+.+ ++|+
T Consensus 16 ~~iv~lAk~L~~lGf~--I~ATgGTAk~L~e~---------GI~v~~V~k~TgfPE 60 (593)
T 1g8m_A 16 AGLVEFARSLNALGLG--LIASGGTATALRDA---------GLPVRDVSDLTGFPE 60 (593)
T ss_dssp TTHHHHHHHHHHTTCE--EEECHHHHHHHHHT---------TCCCEEHHHHHSCCC
T ss_pred HhHHHHHHHHHHCCCE--EEEchHHHHHHHHC---------CCeEEEeecccCCch
Confidence 3467899999999977 67888877777664 677665542 4444
No 241
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=43.78 E-value=20 Score=25.95 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++|.++-.+..|- .|++.|+++||+|+.+...
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 57899998888875 5899999999999987653
No 242
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=43.73 E-value=44 Score=24.34 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=24.2
Q ss_pred CEEEEEcCCC--CCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPA--QGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~--~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++ .| -=..++++|+++|++|.++.
T Consensus 8 ~k~~lVTGas~~~G---IG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 8 GKRAFIAGIADDNG---YGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp TCEEEEECCSSSSS---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCCC---hHHHHHHHHHHCCCeEEEee
Confidence 4677888776 43 23578999999999998864
No 243
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=43.69 E-value=37 Score=24.66 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2357899999999999887644
No 244
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=43.68 E-value=38 Score=23.90 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 8 ~~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 8 ENKVGIVTGSGGG---IGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3567777777642 2358899999999999887643
No 245
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=43.63 E-value=23 Score=21.95 Aligned_cols=27 Identities=30% Similarity=0.284 Sum_probs=21.7
Q ss_pred ChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 16 HVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 16 H~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
+.|-+-++.++..+||++|.-+++++.
T Consensus 86 dqnrleefsrevrrrgfevrtvtspdd 112 (134)
T 2l69_A 86 DQNRLEEFSREVRRRGFEVRTVTSPDD 112 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSHHH
T ss_pred chhHHHHHHHHHHhcCceEEEecChHH
Confidence 567788888899999999988887653
No 246
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=43.62 E-value=49 Score=20.52 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=20.0
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~ 137 (166)
.+||+||.|..++ .+.++.++ .++|.+.+...
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 4699999998654 24444433 24677766543
No 247
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.55 E-value=43 Score=23.97 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=26.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 477888887754 2367899999999999887643
No 248
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=43.48 E-value=32 Score=23.79 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=26.3
Q ss_pred EEEEcC-CCCCChHHHHHHHHHHHHCCCEEEEE
Q 043556 6 VLVIPA-PAQGHVIPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 6 il~~~~-p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (166)
|++... ++.|=-.-...||..|+++|++|-++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 344443 67788999999999999999999986
No 249
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=43.41 E-value=47 Score=22.42 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=25.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 6 VLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 6 il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
++++-.+..|...-+..+++.|+++|+.|..+-
T Consensus 30 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 30 VIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEECCTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 455555566777788999999999999876654
No 250
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=43.36 E-value=51 Score=23.21 Aligned_cols=31 Identities=19% Similarity=0.085 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEE
Q 043556 3 NPHVLVIPAPAQGH----VIPLLEFSQCLANHGVRV 34 (166)
Q Consensus 3 ~~~il~~~~p~~GH----~~P~l~la~~L~~rGh~V 34 (166)
+++|.++.... +- ..-..+|++.|+++|+.|
T Consensus 22 ~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~l 56 (199)
T 3qua_A 22 QWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTL 56 (199)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEE
Confidence 46889987665 43 456678999999999875
No 251
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=43.20 E-value=44 Score=24.72 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEEcc
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~ 136 (166)
.+.++++.+++ .+..||+++..... +..+|++.|++++.+.+
T Consensus 216 ~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 216 QLKEIQDFVKE---YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHH---TTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 46667777664 68999999987653 56799999999988754
No 252
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=43.17 E-value=51 Score=19.63 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=21.0
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||++|.|...+ .+..+.++ -++|++.+....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 4789999998654 24444333 257887776543
No 253
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=43.15 E-value=5.9 Score=29.41 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++|+++-.++.|- .++..|+++||+|+++.-.
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 46888886666553 5788899999999998765
No 254
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=43.14 E-value=45 Score=23.64 Aligned_cols=43 Identities=12% Similarity=-0.004 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccch--HHHHHHH----hCCceEEEcccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEK----MKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~----l~iP~i~~~~~~ 138 (166)
..+.++.+.+ .+||+||.|..++. +..+.++ -++|++.+....
T Consensus 70 ~~~al~~~~~---~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 70 AMNGLIKARE---DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHHH---SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHHhc---CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 3444555443 57999999987653 4444444 358887776544
No 255
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=42.99 E-value=12 Score=30.21 Aligned_cols=35 Identities=20% Similarity=0.335 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++.+|.++-.+..| ..+++.|+++||+|+++.-.
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 677888888776655 45789999999999987644
No 256
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=42.96 E-value=43 Score=26.70 Aligned_cols=40 Identities=15% Similarity=0.287 Sum_probs=34.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchh
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQ 44 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~ 44 (166)
-|+++-.+|.|=-.-...||..|+++|++|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 4667777888999999999999999999999999876543
No 257
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=42.85 E-value=43 Score=24.04 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 477888887753 2357899999999999887644
No 258
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=42.79 E-value=24 Score=25.49 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777777643 2357899999999999987654
No 259
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=42.74 E-value=33 Score=24.50 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=26.5
Q ss_pred CEEEEEcCCCCC----ChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQG----HVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
..|.++.....| +..-..+|++.|+++|+.| ++..
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~l--VsGG 76 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGV--VTGG 76 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEE--EECS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEE--EeCC
Confidence 578888877765 5677889999999999664 4444
No 260
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=42.67 E-value=51 Score=23.36 Aligned_cols=45 Identities=20% Similarity=0.333 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhcCCC--CccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 92 NLEELIEEINEKEDE--KIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~--~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
.+..+++.+.+.. . ...+||++.--..+...|+++|||+..+.+.
T Consensus 14 ~~~~~l~~l~~~~-~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 14 NLQAIIDAIESGK-VNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHHTTS-SCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHHhCC-CCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 3455666655321 2 4567888864445788999999999987654
No 261
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=42.66 E-value=20 Score=23.97 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=26.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+++++..+. =+.|++.+++.|.++|.+|+++ ..
T Consensus 24 ~~~llIaGG~--GItPl~sm~~~l~~~~~~v~l~-g~ 57 (158)
T 3lrx_A 24 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 57 (158)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred CeEEEEEccC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 3555555444 3899999999999999999998 54
No 262
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=42.61 E-value=18 Score=26.82 Aligned_cols=32 Identities=31% Similarity=0.375 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|.++-.+..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 5788887666665 5788899999999988654
No 263
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=42.60 E-value=35 Score=24.50 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 4577888877743 2257899999999999887643
No 264
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.53 E-value=15 Score=27.15 Aligned_cols=33 Identities=12% Similarity=0.030 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++|.++-.+..|. .+++.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899997666663 6789999999999998654
No 265
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.51 E-value=44 Score=20.83 Aligned_cols=33 Identities=9% Similarity=-0.047 Sum_probs=20.1
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.++ .++|.+.+....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 47 SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 3689999998654 34444443 246777665443
No 266
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=42.41 E-value=42 Score=22.64 Aligned_cols=31 Identities=3% Similarity=0.045 Sum_probs=19.4
Q ss_pred CCccEEEecCcc-c----hHHHHHHHhCCceEEEcc
Q 043556 106 EKIDCFIADAYM-G----WTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 106 ~~~d~iI~D~~~-~----~~~~vA~~l~iP~i~~~~ 136 (166)
.+|-+++..... . ....+|+++|+|++..+.
T Consensus 35 krPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~ 70 (170)
T 3cf4_G 35 KRPLLMVGTLALDPELLDRVVKISKAANIPIAATGS 70 (170)
T ss_dssp SSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTT
T ss_pred CCCEEEECCCccchhHHHHHHHHHHHhCCCEEECcc
Confidence 465555544332 1 235689999999987543
No 267
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=42.39 E-value=47 Score=24.39 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=22.6
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+.++|++. .+ .|.+ =..++++|+++||+|+.+.-.
T Consensus 1 m~~~~vlVt-Ga-tG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALIT-GI-RGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEE-TT-TSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEE-CC-CChH--HHHHHHHHHHCCCEEEEEECC
Confidence 544555544 32 2433 256889999999999987643
No 268
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=42.36 E-value=39 Score=24.09 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467788877753 2367899999999999886543
No 269
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=42.36 E-value=23 Score=27.16 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
..+|+|+-.+--| +.+|..|+++|++|+++=
T Consensus 5 ~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E 35 (397)
T 2vou_A 5 TDRIAVVGGSISG-----LTAALMLRDAGVDVDVYE 35 (397)
T ss_dssp CSEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 4677777654333 678889999999999984
No 270
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=42.30 E-value=27 Score=25.50 Aligned_cols=38 Identities=5% Similarity=0.028 Sum_probs=27.8
Q ss_pred CEEEEEcCCCCCC---hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGH---VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH---~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
++|+++..+.... ......++++|.++|++|.++.+.+
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhH
Confidence 4888888774221 2344679999999999999987653
No 271
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=42.28 E-value=52 Score=23.30 Aligned_cols=46 Identities=11% Similarity=0.233 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEccc
Q 043556 92 NLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~ 137 (166)
.++.+++.+.+.. ...+.+||++.--..+...|+++|||++.+.+.
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~ 59 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIAS 59 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcc
Confidence 4666777655321 123567888865455788999999999987543
No 272
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=42.26 E-value=18 Score=23.21 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.|++++-. |.+ =..+++.|.++|++|+++....
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 47777744 443 4678999999999999987653
No 273
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=42.26 E-value=11 Score=27.99 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 1 m~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSG-----LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CEEEEEEEECCSHHH-----HHHHHHHHHSSCCEEEECCS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 555567776554433 56788899999999999654
No 274
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=42.24 E-value=38 Score=24.92 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc-h--HH----HHHHHhCCceEEEccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG-W--TM----RIAEKMKLRRGVVWPS 137 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~-~--~~----~vA~~l~iP~i~~~~~ 137 (166)
.+.++.+.+ .+||+||.|..++ . +. .+-+..++|+|.+...
T Consensus 195 ~eAl~~~~~---~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 195 GEALEAVTR---RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHH---CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 444555443 5799999998776 2 32 2333338998887765
No 275
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=42.14 E-value=60 Score=20.91 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=18.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..|.+..+-. .+ ..+++--.+.++||.+|++++...
T Consensus 28 ~~I~i~~~~~-~~-~~i~~aL~~a~~rGV~Vril~~~~ 63 (155)
T 1byr_A 28 TSIRMMAYSF-TA-PDIMKALVAAKKRGVDVKIVIDER 63 (155)
T ss_dssp SEEEEEESSB-CC-HHHHHHHHHHHHTTCEEEEEEEST
T ss_pred hEEEEEEEEe-CC-HHHHHHHHHHHHCCCEEEEEEeCc
Confidence 3444444322 22 334443344456777777776543
No 276
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=42.04 E-value=55 Score=23.35 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 7 GKVALVTGAAQG---IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCc---HHHHHHHHHHHCCCEEEEEECC
Confidence 366777776642 2357899999999999987643
No 277
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=42.02 E-value=13 Score=28.54 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=23.2
Q ss_pred CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 15 GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
||+.|.+.-...|++.||++.++...
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 89999888888999999999998876
No 278
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=41.99 E-value=24 Score=22.70 Aligned_cols=30 Identities=7% Similarity=0.053 Sum_probs=23.7
Q ss_pred ChHHHHHHHHHHHHCCCEE-EEEeCCcchhH
Q 043556 16 HVIPLLEFSQCLANHGVRV-TFVNSEYNHQR 45 (166)
Q Consensus 16 H~~P~l~la~~L~~rGh~V-t~~t~~~~~~~ 45 (166)
.....+.++..+.+.||+| +++-..+....
T Consensus 16 ~~~~al~~a~a~~~~g~~v~~vff~~dGV~~ 46 (130)
T 2hy5_A 16 ASDSAYQFAKAALEKGHEIFRVFFYHDGVNN 46 (130)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred HHHHHHHHHHHHHhcCCeeCEEEEechHHHH
Confidence 3567799999999999999 88877655433
No 279
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=41.97 E-value=33 Score=26.29 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|...+|+++-.+.. -+++++.+.+.|++|.++....
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 35578888866643 3668999999999999997543
No 280
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=41.96 E-value=42 Score=23.92 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 3 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 3 KGKVAVVTGSTSG---IGLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeCC
Confidence 3467777776643 2367899999999999887543
No 281
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=41.91 E-value=20 Score=23.37 Aligned_cols=18 Identities=17% Similarity=0.237 Sum_probs=14.2
Q ss_pred HHHHHHHHHCCCEEEEEe
Q 043556 21 LEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t 38 (166)
-.||++|+..|.+|++=-
T Consensus 78 ~~Lc~RL~~AG~~V~lk~ 95 (139)
T 3noh_A 78 DSLCERLNDAGADVQIKQ 95 (139)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCceecc
Confidence 367788888899999843
No 282
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=41.91 E-value=39 Score=24.11 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3577888877753 2368899999999999887653
No 283
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=41.87 E-value=34 Score=25.24 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-|+++++.++.| ==..+|++|++.|.+|.+..-.
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 489999998875 2367899999999999887543
No 284
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=41.86 E-value=49 Score=23.37 Aligned_cols=46 Identities=9% Similarity=0.187 Sum_probs=29.7
Q ss_pred HHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 93 LEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
+..+++.+.+.. ...+.+||++.--..+...|+++|||+..+.+..
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~ 63 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKD 63 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc
Confidence 455566554321 1245668888544457788999999999876543
No 285
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=41.85 E-value=35 Score=24.26 Aligned_cols=30 Identities=7% Similarity=-0.070 Sum_probs=21.2
Q ss_pred CCccEEEecCccc--hHHHHHHHhCCceEEEc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l~iP~i~~~ 135 (166)
-+||+||...... ....--++.|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 4799999876542 23444467899999885
No 286
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=41.85 E-value=33 Score=28.28 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCCCh---HHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGHV---IPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH~---~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
++.++++.+..|++ .-.-.||+.|++||++|+.+=..+
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~p 52 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDP 52 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEEC
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeeccc
Confidence 46777775555554 778899999999999999876653
No 287
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=41.83 E-value=9.3 Score=29.19 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=24.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+|+|+-.+..| ..++..|+++||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 78888766655 35788999999999998654
No 288
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=41.78 E-value=19 Score=28.52 Aligned_cols=25 Identities=28% Similarity=0.618 Sum_probs=20.6
Q ss_pred CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 15 GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
||+.|++.+ +.|++.||++.++...
T Consensus 49 Gh~v~l~~~-~~lQ~~G~~~~~lIgd 73 (420)
T 1jil_A 49 GHLLPFLTL-RRFQEHGHRPIVLIGG 73 (420)
T ss_dssp HHHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred HHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 999986655 6899999999998765
No 289
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=41.77 E-value=36 Score=22.98 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=21.2
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (166)
.+||+||.|..++ .+..+.+++ ++|++.+...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 5789999998664 344544432 5888877554
No 290
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=41.76 E-value=9.8 Score=27.58 Aligned_cols=34 Identities=15% Similarity=-0.051 Sum_probs=22.9
Q ss_pred CCccEEEecCccch---HHH----HHHHhCCceEEEccccH
Q 043556 106 EKIDCFIADAYMGW---TMR----IAEKMKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI~D~~~~~---~~~----vA~~l~iP~i~~~~~~~ 139 (166)
.+||+|+.|..... ... +.-.+|+|.|..-=+..
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~~l 142 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRL 142 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESSCS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEeccc
Confidence 57999999975432 223 45556899998665544
No 291
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=41.73 E-value=88 Score=22.59 Aligned_cols=38 Identities=16% Similarity=0.067 Sum_probs=27.7
Q ss_pred CEEEEEcCCCCCC-----------hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGH-----------VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH-----------~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.||+++-....+. ..=++.--..|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5888887764221 3446666778899999999999754
No 292
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=41.70 E-value=20 Score=28.53 Aligned_cols=31 Identities=29% Similarity=0.428 Sum_probs=0.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (166)
|. ++|.++-.+..| ..+|..|+++||+|+++
T Consensus 1 M~-mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~ 31 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVG-----LVSATCFAELGANVRCI 31 (450)
T ss_dssp -C-CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CC-CEEEEECcCHHH-----HHHHHHHHhcCCEEEEE
No 293
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=41.70 E-value=57 Score=19.71 Aligned_cols=41 Identities=12% Similarity=0.107 Sum_probs=24.6
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHHh-------CCceEEEccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPS 137 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~ 137 (166)
.+.++.+.+ .+||+||.|...+ .+..+.+++ ++|.+.+...
T Consensus 39 ~~a~~~~~~---~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 39 VDALNKLQA---GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHHTT---CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 444555432 5789999998664 355554443 4677766544
No 294
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=41.64 E-value=28 Score=25.59 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++|.++-.+..|. .+++.|+++||+|+++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 36888886666664 6788999999999988654
No 295
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=41.63 E-value=28 Score=25.39 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=23.5
Q ss_pred CC-CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+ +++|+++- +.|.+- ..++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 55 45666553 224432 46789999999999988754
No 296
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=41.61 E-value=28 Score=26.00 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=26.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|.|+-.+..|. .+++.|.++||+|++..-.
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 4788998888884 6799999999999998543
No 297
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=41.51 E-value=14 Score=23.42 Aligned_cols=32 Identities=22% Similarity=0.136 Sum_probs=22.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46777653 4333 46789999999999987654
No 298
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=41.50 E-value=39 Score=22.19 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=30.9
Q ss_pred EEEEEcCC-CCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 5 HVLVIPAP-AQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 5 ~il~~~~p-~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
+++++-+. ..-.+.+-+.+|...++.|++|+++-+......+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 45554444 4466788899999999999999999887655443
No 299
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=41.43 E-value=38 Score=24.72 Aligned_cols=30 Identities=10% Similarity=0.000 Sum_probs=23.9
Q ss_pred CccEEEecCcc------chHHHHHHHhCCceEEEcc
Q 043556 107 KIDCFIADAYM------GWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 107 ~~d~iI~D~~~------~~~~~vA~~l~iP~i~~~~ 136 (166)
+||+|+..--. ..+..+|++||+|.+...+
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 58999977543 2578999999999998754
No 300
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=41.41 E-value=16 Score=27.43 Aligned_cols=17 Identities=12% Similarity=0.235 Sum_probs=15.2
Q ss_pred HHHHHHHHHCCCEEEEE
Q 043556 21 LEFSQCLANHGVRVTFV 37 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~ 37 (166)
+.+|..|+++|++|+++
T Consensus 17 l~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMI 33 (397)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 56788999999999998
No 301
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=41.29 E-value=39 Score=24.76 Aligned_cols=30 Identities=13% Similarity=0.054 Sum_probs=23.9
Q ss_pred CccEEEecCcc------chHHHHHHHhCCceEEEcc
Q 043556 107 KIDCFIADAYM------GWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 107 ~~d~iI~D~~~------~~~~~vA~~l~iP~i~~~~ 136 (166)
+||+|+..--. ..+..+|++||+|.+...+
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 68999977543 2578899999999998754
No 302
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=41.13 E-value=12 Score=28.82 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.++|.++-.+..| ..++..|+++||+|+++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 4688888766555 458899999999999987653
No 303
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=41.09 E-value=41 Score=24.70 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=30.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
+||++..=-|. +---+..|.+.|.+.| +|+++.+...+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 57777776664 4556788999999998 9999999876544
No 304
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=41.03 E-value=29 Score=25.41 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=25.0
Q ss_pred CC-CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|. +++|+++-.+..|. .+++.|++.||+|+++...
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 54 57899997666664 4578889999999876543
No 305
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=40.99 E-value=36 Score=24.80 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=25.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888877753 235789999999999988754
No 306
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=40.81 E-value=39 Score=24.83 Aligned_cols=31 Identities=13% Similarity=0.087 Sum_probs=24.4
Q ss_pred CccEEEecCcc------chHHHHHHHhCCceEEEccc
Q 043556 107 KIDCFIADAYM------GWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 107 ~~d~iI~D~~~------~~~~~vA~~l~iP~i~~~~~ 137 (166)
+||+|+...-. ..+..+|++||+|.+...+.
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 68999977644 25788999999999987643
No 307
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=40.75 E-value=45 Score=24.76 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCCCChHHH--HHHHHHHHHCC-CEEEEEeCC
Q 043556 2 SNPHVLVIPAPAQGHVIPL--LEFSQCLANHG-VRVTFVNSE 40 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~--l~la~~L~~rG-h~Vt~~t~~ 40 (166)
++.|||++... .+|-.+- -.|.+.|.++| ++|++....
T Consensus 3 ~~~kvLiv~G~-~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQ-NNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESC-CSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCC-CCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 35789999444 4886444 46777888888 999998764
No 308
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=40.68 E-value=36 Score=24.20 Aligned_cols=35 Identities=6% Similarity=0.091 Sum_probs=27.0
Q ss_pred CEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPA--PAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
++.++++. ++.|=-.-...|++.|+++|.+|.++=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 44444444 355888899999999999999999864
No 309
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=40.57 E-value=45 Score=21.09 Aligned_cols=43 Identities=16% Similarity=0.056 Sum_probs=25.4
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
..+.++.+.+ .+||+||.|.... .+..+.++ -++|++.+....
T Consensus 50 ~~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 50 GAAALELIKA---HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHHHHH---HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 4455555443 4789999997653 24444433 347777765543
No 310
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=40.56 E-value=18 Score=27.41 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..+|.++-.+..| ..+|..|+++||+|+++-...
T Consensus 6 ~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCCH
Confidence 4678888665555 467888999999999986553
No 311
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=40.45 E-value=46 Score=23.69 Aligned_cols=32 Identities=3% Similarity=-0.115 Sum_probs=21.6
Q ss_pred CCccEEEecCcc-chHHHHHHHhCCceEEEccc
Q 043556 106 EKIDCFIADAYM-GWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~-~~~~~vA~~l~iP~i~~~~~ 137 (166)
-+||+||..... ......-++.|||++.+...
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 478999976433 22344566789999987543
No 312
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=40.39 E-value=36 Score=24.25 Aligned_cols=43 Identities=14% Similarity=0.034 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEEc
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~ 135 (166)
.++++++...+.....+.+||++.- -.+...|+++|||+..+.
T Consensus 25 nl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 25 LLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp HHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 3555565542210124677888874 346789999999999884
No 313
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=40.24 E-value=28 Score=24.12 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=27.7
Q ss_pred CEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQ---GHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.+|+++|.=|. -=..+.-+|++.|.++|.+|.|...+-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 45666653221 123789999999999999999988763
No 314
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=40.18 E-value=26 Score=26.11 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3688888554444 56789999999999988654
No 315
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.08 E-value=41 Score=24.30 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 477888887754 235789999999999988764
No 316
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=40.04 E-value=41 Score=22.92 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=25.0
Q ss_pred EEEEEcCCCCC----ChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQG----HVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.|.++.....| +..-..+|++.|+++|+. +++..
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~--lV~Gg 40 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFG--LACGG 40 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEE--EEECC
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCE--EEeCC
Confidence 57777776654 467888999999999955 55554
No 317
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=40.03 E-value=24 Score=24.67 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=22.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++|.++-.+..| ..+++.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 3577777544444 5678899999999998754
No 318
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=39.96 E-value=41 Score=25.06 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=23.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|++++|+++-.. |.+- ..+++.|.++||+|+.++-..
T Consensus 8 M~~~~IlVtGat--G~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGAT--GFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTT--SHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCC--cHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 334466555332 4332 468889999999999987654
No 319
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=39.91 E-value=69 Score=20.18 Aligned_cols=33 Identities=9% Similarity=-0.048 Sum_probs=20.3
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|.... .+..+.++ -++|++.+....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4689999997553 24433333 257877766543
No 320
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=39.83 E-value=46 Score=19.94 Aligned_cols=29 Identities=10% Similarity=0.103 Sum_probs=18.7
Q ss_pred CCccEEEecCccc---hHHHHHHH-------hCCceEEE
Q 043556 106 EKIDCFIADAYMG---WTMRIAEK-------MKLRRGVV 134 (166)
Q Consensus 106 ~~~d~iI~D~~~~---~~~~vA~~-------l~iP~i~~ 134 (166)
.+||+||.|.... .+..+.++ .++|++.+
T Consensus 48 ~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 48 DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp HCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE
Confidence 3689999997554 24333332 36888888
No 321
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.79 E-value=20 Score=23.09 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
+.||+++-.+-. -..+++.|.++|++|+++.....
T Consensus 7 ~~~viIiG~G~~-----G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRV-----GSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHH-----HHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEECCHH
Confidence 357777754333 35788999999999999987643
No 322
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=39.72 E-value=55 Score=22.31 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=21.8
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEccccH
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~~ 139 (166)
.+||+||.|...+ .+..+.++ -++|++.+....-
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 4789999998654 24444333 2688887765543
No 323
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=39.71 E-value=44 Score=22.67 Aligned_cols=40 Identities=23% Similarity=0.356 Sum_probs=27.1
Q ss_pred CC-CCEEEEEcCCCCCChHHHHH-HHHHHHHCCCEEEEEeCCc
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLE-FSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~-la~~L~~rGh~Vt~~t~~~ 41 (166)
|. +++|+++-.. .|+..-+.+ +++.|.+.|++|.++....
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 44 4789998888 887655554 4445666799999886543
No 324
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=39.64 E-value=66 Score=19.89 Aligned_cols=21 Identities=19% Similarity=0.230 Sum_probs=14.0
Q ss_pred CCccEEEecCccc--hHHHHHHH
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK 126 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~ 126 (166)
.+||+||.|...+ .+..+.++
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHH
Confidence 4789999998654 34444443
No 325
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=39.56 E-value=45 Score=24.35 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++.| -=..++++|+++|++|.++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 467888877753 34578999999999999876
No 326
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=39.51 E-value=29 Score=24.75 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 8 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 8 RDAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp --CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred cCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888877753 235789999999999988765
No 327
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=39.49 E-value=64 Score=22.97 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCC----ChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQG----HVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
..|.++.....+ +..-..+|++.|+++|+.| ++..
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~l--V~GG 48 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL--VYGG 48 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEE--EECC
Confidence 468888766654 3457788999999999775 4543
No 328
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=39.47 E-value=56 Score=22.43 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=20.8
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.++ -++|++.+...
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 5789999998654 24444333 36888876543
No 329
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=39.25 E-value=1.8e+02 Score=24.84 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 2 SNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++++|++.+.++-+|-.-.--++..|...|++|......
T Consensus 595 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~ 633 (727)
T 1req_A 595 RRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLF 633 (727)
T ss_dssp SCCEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTT
T ss_pred CCCEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCC
Confidence 368999999999999999988999999999999876544
No 330
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=39.19 E-value=22 Score=28.07 Aligned_cols=36 Identities=31% Similarity=0.298 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~ 41 (166)
|++.+|+++=.+.-| +..|..|+++ |++||++-..+
T Consensus 1 M~~~~VvIIGaG~aG-----l~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 1 MSLKHVVVIGAVALG-----PKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp ---CEEEEECCSSHH-----HHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhhCcCCCEEEEECCC
Confidence 666788887665544 4566777777 99999997654
No 331
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=39.15 E-value=49 Score=23.86 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 5 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 5 SGKTLFITGASRG---IGLAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEecc
Confidence 3577888877753 2357889999999999887643
No 332
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=39.14 E-value=51 Score=23.66 Aligned_cols=46 Identities=13% Similarity=0.234 Sum_probs=28.8
Q ss_pred HHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEcccc
Q 043556 93 LEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWPSS 138 (166)
Q Consensus 93 ~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~~~ 138 (166)
+..+++.+.+.. ...+.+||++.--..+...|+++|||+..+.+..
T Consensus 36 ~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~ 82 (229)
T 3auf_A 36 LQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAA 82 (229)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccc
Confidence 344555544311 0235678888544456789999999999876543
No 333
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=39.11 E-value=42 Score=24.09 Aligned_cols=32 Identities=22% Similarity=0.140 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.++++.++.| -=..++++|+++|++|.++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56778776643 335789999999999998765
No 334
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=39.07 E-value=47 Score=21.26 Aligned_cols=44 Identities=14% Similarity=-0.001 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEccc
Q 043556 93 LEELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPS 137 (166)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~ 137 (166)
..+.++.+.+.. .+||+||.|.... .+..+.++ -++|++.+...
T Consensus 70 ~~~al~~l~~~~-~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 70 GEEAVIKYKNHY-PNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHHG-GGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhcC-CCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 455555554310 2689999998653 24444433 25887776654
No 335
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.07 E-value=40 Score=24.30 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 477888887753 236789999999999988753
No 336
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=39.07 E-value=92 Score=21.43 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
..+|+++-+++. ...-+......|...|++|++++...
T Consensus 2 ~~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 2 SASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357888888875 34455556678888999999998764
No 337
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=38.96 E-value=45 Score=23.83 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.|.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 477888877753 2357899999999999887643
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=38.92 E-value=24 Score=26.49 Aligned_cols=32 Identities=9% Similarity=0.091 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCC-CEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHG-VRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~t~~ 40 (166)
++|.|+-.+..| ..+++.|+++| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 578888665555 67899999999 999987654
No 339
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=38.90 E-value=54 Score=23.22 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 478888887753 2357899999999999887644
No 340
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=38.86 E-value=37 Score=24.23 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=28.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.|++..-+|.|=-.-...||..|+++|++|.++=..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 345555666788899999999999999999987544
No 341
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=38.82 E-value=62 Score=19.54 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|.+.+|+++- .+-.-...+.+.|.+.|++|..+.+..
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~~ 37 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMSGT 37 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESSHH
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 6667787774 455556677778888899888765543
No 342
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=38.64 E-value=50 Score=24.26 Aligned_cols=41 Identities=15% Similarity=0.217 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
+||++..=-|. |--=+..|.+.|.+.| +|+++.+...+...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 57777666664 4455778889998876 99999998765443
No 343
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=38.56 E-value=42 Score=24.01 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++..
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 577888877753 235889999999999988744
No 344
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=38.56 E-value=24 Score=27.49 Aligned_cols=25 Identities=12% Similarity=0.425 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 17 VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 17 ~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.-++.+|.+.|.++|++|.+++...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 5789999999999999999988764
No 345
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=38.44 E-value=43 Score=23.81 Aligned_cols=30 Identities=10% Similarity=-0.111 Sum_probs=20.4
Q ss_pred CCccEEEecCcc-c-hHHHHHHHhCCceEEEc
Q 043556 106 EKIDCFIADAYM-G-WTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 106 ~~~d~iI~D~~~-~-~~~~vA~~l~iP~i~~~ 135 (166)
-+||+||..... . ....--++.|||++.+.
T Consensus 58 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 58 LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 479999976542 2 23444467899998874
No 346
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=38.36 E-value=33 Score=25.67 Aligned_cols=40 Identities=13% Similarity=0.263 Sum_probs=28.8
Q ss_pred CCC-CEEEEEcCCCCCCh-HHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSN-PHVLVIPAPAQGHV-IPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~-~~il~~~~p~~GH~-~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.. .+|+++.-|..+.. ....++.+.|.++|++|.+..+.
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 543 58999999988775 44778888999999998876443
No 347
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.26 E-value=20 Score=26.55 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 4688888555444 36789999999999998654
No 348
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=38.24 E-value=23 Score=25.83 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=26.6
Q ss_pred CEEEEEcCCCC--CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ--GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|++++.++- |+- +-.|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 58888888763 332 67899999999999998653
No 349
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.13 E-value=50 Score=23.58 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=25.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 467788877643 3367899999999998877543
No 350
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=38.07 E-value=37 Score=25.92 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCCccEEEecCccch--HHHHHHHh-----CCceEEEccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l-----~iP~i~~~~~ 137 (166)
++.++.+.+ .+||+||.|..++. +..+.+++ ++|+|.+...
T Consensus 39 ~~al~~~~~---~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~ 86 (394)
T 3eq2_A 39 LQGLQIFES---EQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGA 86 (394)
T ss_dssp HHHHHHHHH---SCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---
T ss_pred HHHHHHHhh---CCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcC
Confidence 344444433 57999999987653 45555443 5888776654
No 351
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=38.02 E-value=51 Score=19.59 Aligned_cols=33 Identities=18% Similarity=0.077 Sum_probs=21.0
Q ss_pred CCccEEEecCccc--hHHHHHHHh----CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM----KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l----~iP~i~~~~~~ 138 (166)
.+||+||.|...+ .+..+.+++ ++|.+.+....
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (121)
T 1zh2_A 44 RKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARS 82 (121)
T ss_dssp HCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCC
Confidence 3689999998654 345544443 57777765543
No 352
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=37.91 E-value=29 Score=24.73 Aligned_cols=36 Identities=8% Similarity=0.211 Sum_probs=22.6
Q ss_pred EEEEEcCCCCCCh--HHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHV--IPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~--~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-++++..++.||- .-+..+++.|+++|+.|..+-..
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 4666777776763 34778999999999988776544
No 353
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=37.78 E-value=38 Score=22.90 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=26.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
..+++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 23 ~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 23 TGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 44555566667777889999999999999877643
No 354
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=37.74 E-value=21 Score=28.01 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH--GVRVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~t~~~ 41 (166)
|++.+|+++=.+.-| +..|..|+++ |++||++-..+
T Consensus 1 M~~~~VvIIGgG~aG-----l~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAG-----MSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHHCTTSEEEEECSSS
T ss_pred CCcCcEEEECCcHHH-----HHHHHHHHHhCcCCCEEEEECCC
Confidence 777888888665544 5667788876 89999986543
No 355
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=37.65 E-value=26 Score=26.78 Aligned_cols=32 Identities=22% Similarity=0.429 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
..+|+|+-.+--| +.+|..|+++|++|+++=-
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 3467776555434 6678899999999999853
No 356
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=37.64 E-value=35 Score=24.32 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+.++++.++.| + =..++++|+++|++|.++.
T Consensus 2 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~ 32 (254)
T 1zmt_A 2 STAIVTNVKHF-G--GMGSALRLSEAGHTVACHD 32 (254)
T ss_dssp CEEEESSTTST-T--HHHHHHHHHHTTCEEEECC
T ss_pred eEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEe
Confidence 46677776643 2 3578999999999988764
No 357
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.58 E-value=47 Score=24.29 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 47 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 47 GKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2357899999999999887654
No 358
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=37.57 E-value=73 Score=19.74 Aligned_cols=32 Identities=16% Similarity=-0.021 Sum_probs=20.6
Q ss_pred CCccEEEecCccc---hHHHHHH----HhCCceEEEccc
Q 043556 106 EKIDCFIADAYMG---WTMRIAE----KMKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~---~~~~vA~----~l~iP~i~~~~~ 137 (166)
.+||+||.|...+ .+..+.+ .-++|++.+...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 4789999997652 2444433 346887776554
No 359
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=37.49 E-value=47 Score=22.57 Aligned_cols=32 Identities=22% Similarity=0.069 Sum_probs=19.7
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (166)
.+||+||.|..++ .+..+.+++ ++|.+.+...
T Consensus 50 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 50 LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp HCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 3689999998664 244444432 4677766544
No 360
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.48 E-value=71 Score=23.07 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 467788877753 2357899999999999887743
No 361
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=37.32 E-value=56 Score=20.92 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=23.1
Q ss_pred CCCEEEEEcCCCCCCh-HHHHHHHHHHHHCCCEEEEE
Q 043556 2 SNPHVLVIPAPAQGHV-IPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 2 ~~~~il~~~~p~~GH~-~P~l~la~~L~~rGh~Vt~~ 37 (166)
.++.|+++...+.+.. .-+..+++.|+++|+.|..+
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~ 39 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERP 39 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEe
Confidence 4556666665553322 24568999999999876443
No 362
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=37.31 E-value=48 Score=24.16 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2367899999999999887644
No 363
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=37.26 E-value=44 Score=24.55 Aligned_cols=37 Identities=16% Similarity=0.112 Sum_probs=28.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.|++..-+|.|=-.-...||..|+++|.+|.++=...
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3445545556777999999999999999999986543
No 364
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=37.26 E-value=27 Score=25.61 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=26.7
Q ss_pred CEEEEEcCCCC--CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ--GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|++++.++- |+- +-.|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEec
Confidence 47899888763 332 67899999999999998653
No 365
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=37.25 E-value=66 Score=23.32 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=25.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| + =..++++|+++|++|.++.-.
T Consensus 29 gk~vlVTGas~g-I--G~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVTGAGAG-I--GLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEETTTTST-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2 257899999999999887644
No 366
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=37.19 E-value=51 Score=24.10 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=29.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
+||++..=-|. +--=+..|.+.|.+.| +|+++++...+..
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 57777766654 3445778888999998 6999998866543
No 367
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=37.19 E-value=40 Score=24.02 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhcC-CCCccEEEecCccchHHHHHHHhCCceEEEcc
Q 043556 92 NLEELIEEINEKE-DEKIDCFIADAYMGWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~~ 136 (166)
.++++++.+.+.. ...+.+||+|---..+...|+++|||+..+-.
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 4566666654311 02467788875333467899999999998754
No 368
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=37.15 E-value=28 Score=25.01 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=23.0
Q ss_pred EcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 9 IPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 9 ~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+-.+..|+-.-+..+++.|+++|++|..+-
T Consensus 56 llHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 56 VSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 345556777778889999999999987653
No 369
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=37.09 E-value=48 Score=26.72 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC-CC-EEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH-GV-RVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh-~Vt~~t~~~ 41 (166)
.++|.++-.+..| ..+|..|+++ || +|+++-...
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 4689998777666 5788999999 99 999986543
No 370
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=37.09 E-value=37 Score=23.86 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|.+..|+++-..+.++.. .-.++..|+++||+|..+--
T Consensus 1 ~~~~~vvllHG~~~~~~~-w~~~~~~L~~~g~~via~Dl 38 (257)
T 3c6x_A 1 MAFAHFVLIHTICHGAWI-WHKLKPLLEALGHKVTALDL 38 (257)
T ss_dssp -CCCEEEEECCTTCCGGG-GTTHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEcCCccCcCC-HHHHHHHHHhCCCEEEEeCC
Confidence 667778888766655543 35678899999999877644
No 371
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=37.03 E-value=44 Score=24.18 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++.| -=..++++|+++|++|.++.
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEe
Confidence 478888888754 23678999999999998874
No 372
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=37.01 E-value=49 Score=23.67 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=25.9
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 577888887753 2367899999999999887643
No 373
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=36.99 E-value=47 Score=23.36 Aligned_cols=42 Identities=12% Similarity=0.156 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 94 EELIEEINEKEDEKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 94 ~~ll~~l~~~~~~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+.++.+.+ .+||+||.|..++ .+..+.++ .++|++.+....
T Consensus 57 ~~al~~~~~---~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARE---TRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 444544443 4789999998664 24554443 257887776544
No 374
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=36.92 E-value=82 Score=20.64 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=26.8
Q ss_pred CEEEEE-cCCCCCChH--HHHHHHHHHHHCCCEE-EEEeCCcch
Q 043556 4 PHVLVI-PAPAQGHVI--PLLEFSQCLANHGVRV-TFVNSEYNH 43 (166)
Q Consensus 4 ~~il~~-~~p~~GH~~--P~l~la~~L~~rGh~V-t~~t~~~~~ 43 (166)
++++++ +.|-.|+-. --+++++.+.+.||+| +++-..+..
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 445444 444456554 4478899999999999 877666544
No 375
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=36.91 E-value=68 Score=22.08 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=24.9
Q ss_pred EEEEcCCCCCC--hHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 6 VLVIPAPAQGH--VIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 6 il~~~~p~~GH--~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++++-.+..|+ ..-+..+++.|+++|+.|..+-..
T Consensus 48 ~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 48 MAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 44444445555 566889999999999998876543
No 376
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=36.90 E-value=68 Score=23.17 Aligned_cols=35 Identities=11% Similarity=0.251 Sum_probs=25.5
Q ss_pred CEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ-GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++. |-+ =..++++|+++|++|.++.-.
T Consensus 21 ~k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 21 GKRALITGVANERSI--AYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp TCEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCC
Confidence 36777887752 333 357899999999999987644
No 377
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=36.87 E-value=11 Score=27.21 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCC----CEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHG----VRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rG----h~Vt~~t~ 39 (166)
|++++|.++-.+..|. .+++.|+++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 6677899886655554 3678888889 89998754
No 378
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=36.85 E-value=48 Score=24.07 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.|++..-+|.|=-.-...||..|+++|++|.++=..
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 355555566788899999999999999999987544
No 379
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=36.80 E-value=26 Score=21.89 Aligned_cols=33 Identities=21% Similarity=0.154 Sum_probs=19.5
Q ss_pred CCccEEEecCccch----HHHHHHH-----hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMGW----TMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~~----~~~vA~~-----l~iP~i~~~~~~ 138 (166)
.+||+||.|...+. +..+.++ -++|++.+....
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 90 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSS 90 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 46888888876533 3344333 257777665543
No 380
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=36.77 E-value=89 Score=20.52 Aligned_cols=36 Identities=11% Similarity=0.026 Sum_probs=25.8
Q ss_pred EEEEEcCCCCCChHHHHH--HHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLE--FSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~--la~~L~~rGh~Vt~~t~~ 40 (166)
..+++-.+..|+..-+.. +++.|+++|+.|..+-..
T Consensus 33 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 70 (210)
T 1imj_A 33 FSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70 (210)
T ss_dssp CEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCT
T ss_pred ceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCC
Confidence 344555555677777777 599999999988776544
No 381
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=36.75 E-value=61 Score=23.14 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+++|+++- + |.+- ..++++|.++||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 35666663 4 6543 467899999999999987654
No 382
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=36.68 E-value=54 Score=23.51 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888887753 2357899999999999887643
No 383
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=36.65 E-value=46 Score=24.24 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++|+++-.+..|. .+++.|+++||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 5888887666554 4688899999999877543
No 384
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=36.51 E-value=59 Score=24.01 Aligned_cols=39 Identities=13% Similarity=0.018 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCCC-C---hHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQG-H---VIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~G-H---~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+.||+++..+..+ | +..-..++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678887764332 2 4577899999999999999988544
No 385
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=36.47 E-value=62 Score=22.78 Aligned_cols=32 Identities=16% Similarity=-0.096 Sum_probs=20.8
Q ss_pred CCccEEEecC-cc-chHHHHHHHhCCceEEEccc
Q 043556 106 EKIDCFIADA-YM-GWTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~-~~-~~~~~vA~~l~iP~i~~~~~ 137 (166)
-+||+||... .. .....--++.|||++.+...
T Consensus 56 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 56 LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 4799999853 22 22344445789999987643
No 386
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=36.46 E-value=36 Score=23.82 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcc
Q 043556 3 NPHVLVIP--APAQGHVIPLLEFSQCLANH-GVRVTFVNSEYN 42 (166)
Q Consensus 3 ~~~il~~~--~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~ 42 (166)
+++++.+. -+|.|=-.-...||..|+++ |.+|.++=....
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45555554 35678889999999999999 999999876543
No 387
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=36.46 E-value=55 Score=23.59 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2357899999999999887643
No 388
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=36.45 E-value=49 Score=24.12 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
||++..=-|. +--=+..|.+.|.+.| +|+++.+...+..
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 40 (244)
T 2e6c_A 2 RILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSA 40 (244)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 5666555553 3344788999999888 9999999876543
No 389
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=36.40 E-value=45 Score=27.44 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCCCh---HHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGHV---IPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH~---~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
++.++++.+..|++ .-.-.||+.|++||++|+.+=..+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~p 43 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDP 43 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEEC
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccc
Confidence 46677775555555 778899999999999999876653
No 390
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.38 E-value=37 Score=24.39 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++.| -=..++++|+++|++|.++.
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEe
Confidence 478888888755 23678999999999998875
No 391
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=36.37 E-value=31 Score=25.54 Aligned_cols=34 Identities=32% Similarity=0.422 Sum_probs=26.8
Q ss_pred CEEEEEcCCCC--CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ--GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|++++.++- |+- +-.|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 48888888763 332 67899999999999998654
No 392
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=36.36 E-value=52 Score=23.29 Aligned_cols=33 Identities=6% Similarity=-0.022 Sum_probs=21.4
Q ss_pred CCccEEEecCccchHHH-HHHHhCCceEEEcccc
Q 043556 106 EKIDCFIADAYMGWTMR-IAEKMKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~~~~~-vA~~l~iP~i~~~~~~ 138 (166)
.++|.||.......... .+.+.|+|+|.+....
T Consensus 63 ~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~~ 96 (277)
T 3e61_A 63 HNCTGMISTAFNENIIENTLTDHHIPFVFIDRIN 96 (277)
T ss_dssp TTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGCC
T ss_pred CCCCEEEEecCChHHHHHHHHcCCCCEEEEeccC
Confidence 57898887664333445 5667789998876543
No 393
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=36.32 E-value=22 Score=24.57 Aligned_cols=20 Identities=5% Similarity=0.031 Sum_probs=17.3
Q ss_pred HHHHHHHHHCCCEEEEEeCC
Q 043556 21 LEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t~~ 40 (166)
..++++|.++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999998754
No 394
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=36.31 E-value=12 Score=28.28 Aligned_cols=35 Identities=20% Similarity=0.313 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++.+|+++=.+.-| +.+|..|+++|++|+++=..
T Consensus 2 m~~~dVvIvG~G~aG-----l~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 2 METYDVLVVGGGPGG-----STAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CccCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 334456665444333 56788899999999998544
No 395
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=36.29 E-value=37 Score=23.25 Aligned_cols=33 Identities=12% Similarity=-0.011 Sum_probs=22.2
Q ss_pred CCccEEEecCccc--hHHHHHHH---------hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK---------MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~---------l~iP~i~~~~~~ 138 (166)
.+||+||.|..++ .+..+.++ .++|+|.+....
T Consensus 118 ~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 118 LPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp CSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 3799999998664 24444433 458888877654
No 396
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=36.24 E-value=78 Score=22.12 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=22.3
Q ss_pred CCccEEEecCccc-hHHHHHHHhCCceEEE
Q 043556 106 EKIDCFIADAYMG-WTMRIAEKMKLRRGVV 134 (166)
Q Consensus 106 ~~~d~iI~D~~~~-~~~~vA~~l~iP~i~~ 134 (166)
.++|+|+.-+... +...+.+.+++|++..
T Consensus 74 ~g~d~iviaCnta~~~~~l~~~~~iPvi~i 103 (228)
T 2eq5_A 74 EGVDAIIISCAADPAVEKVRKLLSIPVIGA 103 (228)
T ss_dssp TTCSEEEECSTTCTTHHHHHHHCSSCEEEH
T ss_pred CCCCEEEEeCCchHHHHHHHHhCCCCEeCc
Confidence 5799999888654 4456788899997764
No 397
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=36.23 E-value=47 Score=23.34 Aligned_cols=35 Identities=20% Similarity=0.139 Sum_probs=25.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-|+++ .+..|+..-...+++.|+++|++|..+-..
T Consensus 48 ~vv~~-hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 48 TILLM-HGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp EEEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred eEEEE-cCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 34444 445566667889999999999999887543
No 398
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=36.16 E-value=33 Score=27.54 Aligned_cols=49 Identities=10% Similarity=0.090 Sum_probs=34.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHHHhhhccCCCCCCCeeeeecCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVLKSLEGKNNLEEKIRLVSIPD 67 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 67 (166)
|.++++..-+ .-+++||+.|.+.|.+ ++++....+.++.. |+.+..+.+
T Consensus 14 ~~aliSV~DK---~gl~~~A~~L~~~G~e--iisTgGTak~L~~~---------Gi~v~~Vs~ 62 (464)
T 1zcz_A 14 KRILVSLYEK---EKYLDILRELHEKGWE--IWASSGTAKFLKSN---------GIEANDVST 62 (464)
T ss_dssp CEEEEECSST---GGGHHHHHHHHHTTCE--EEECHHHHHHHHHT---------TCCCEEGGG
T ss_pred cEEEEEecCc---cCHHHHHHHHHHCCCE--EEECchHHHHHHHC---------CCceEEHHh
Confidence 3444444333 3478999999999966 78888887777664 777776653
No 399
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=36.13 E-value=54 Score=23.93 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=28.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhHH
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQRV 46 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~ 46 (166)
||++..=-|. |--=+..|.+.|.+.| +|+++.+...+...
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT 41 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 5666555543 3444788999999888 99999998765443
No 400
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=36.11 E-value=19 Score=26.93 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCC-EEEEEeCCc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGV-RVTFVNSEY 41 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~t~~~ 41 (166)
|++.+|+++-.+.- =+..|..|+++|+ +|+++-...
T Consensus 2 m~~~~vvIIGaG~a-----Gl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 2 MQHHKVAIIGAGAA-----GIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CCEEEEEEECCSHH-----HHHHHHHHHHTTCCCEEEECSSS
T ss_pred CccCcEEEECcCHH-----HHHHHHHHHHcCCCcEEEEecCC
Confidence 55567777755432 2567888899999 999986543
No 401
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=36.10 E-value=46 Score=21.16 Aligned_cols=34 Identities=18% Similarity=0.028 Sum_probs=21.2
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEccccH
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~~ 139 (166)
.+||+||.|.... .+..+.++ -++|++.+....-
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 5689999997553 24443333 2688887765443
No 402
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=35.95 E-value=31 Score=24.07 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=24.5
Q ss_pred CC-CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MS-NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~-~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+ +.+.++++.++ |-+ =..++++|+++|++|+++.-.
T Consensus 1 M~~~~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 54 23566676655 322 367899999999999887654
No 403
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=35.93 E-value=55 Score=24.04 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=26.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 41 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 467888887753 2357899999999999987644
No 404
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=35.91 E-value=50 Score=20.86 Aligned_cols=33 Identities=9% Similarity=0.076 Sum_probs=20.5
Q ss_pred CCccEEEecCccc--hHHHHHHHh-------CCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-------KLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-------~iP~i~~~~~~ 138 (166)
.+||+||.|..++ .+..+.+++ ++|.+.+....
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 3689999998664 244444332 46777776543
No 405
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=35.84 E-value=35 Score=21.22 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=18.4
Q ss_pred CCccEEEecCccch--HHHHHH----H---hCCceEEEccc
Q 043556 106 EKIDCFIADAYMGW--TMRIAE----K---MKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~~--~~~vA~----~---l~iP~i~~~~~ 137 (166)
.+||+||.|..... +..+.+ . -++|++.+...
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 45 HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 46899999986532 333322 2 35787776654
No 406
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=35.72 E-value=67 Score=22.16 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=24.2
Q ss_pred EEEEcCCCCCC--hHHHHHHHHHHHHCCCEEEEEe
Q 043556 6 VLVIPAPAQGH--VIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 6 il~~~~p~~GH--~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.+++-.+..|+ ..-+..++..|+++|++|..+-
T Consensus 29 ~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 29 LCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 44555556677 6677889999999999887654
No 407
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=35.71 E-value=27 Score=26.58 Aligned_cols=25 Identities=24% Similarity=0.420 Sum_probs=20.3
Q ss_pred CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 15 GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
||+.|+.. .+.|++.||++.++...
T Consensus 50 Gh~l~l~~-~~~lQ~~g~~~~~~i~D 74 (322)
T 2yxn_A 50 GHLVPLLC-LKRFQQAGHKPVALVGG 74 (322)
T ss_dssp HHHHHHHH-HHHHHHTTCEEEEEECT
T ss_pred HHHHHHHH-HHHHHHcCCcEEEEEcc
Confidence 89997654 56888999999998774
No 408
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=35.67 E-value=39 Score=23.16 Aligned_cols=24 Identities=8% Similarity=-0.076 Sum_probs=21.1
Q ss_pred HH-HHHHHHHHHHCCCEEEEEeCCc
Q 043556 18 IP-LLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 18 ~P-~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
|| .+++|++++++|+.|..+|+..
T Consensus 90 n~~~ie~A~~ake~G~~vIaITs~~ 114 (170)
T 3jx9_A 90 RSDLLASLARYDAWHTPYSIITLGD 114 (170)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred CHHHHHHHHHHHHCCCcEEEEeCcc
Confidence 44 8999999999999999999933
No 409
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=35.65 E-value=41 Score=23.29 Aligned_cols=32 Identities=13% Similarity=0.172 Sum_probs=20.4
Q ss_pred CCccEEEecCccc--hHHHHHHHh-----CCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEKM-----KLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~l-----~iP~i~~~~~ 137 (166)
.+||+||.|..++ .+..+.+++ ++|++.+...
T Consensus 46 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 46 ARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp HCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 3689999998664 244444432 5777776544
No 410
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=35.52 E-value=58 Score=23.46 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++..
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 477888887753 235789999999999988765
No 411
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=35.47 E-value=63 Score=23.88 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++|+++- +.|.+- ..+++.|.++||+|+.+.-.
T Consensus 25 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLITG--VAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34555543 224432 57899999999999998753
No 412
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=35.41 E-value=1.3e+02 Score=23.40 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhcCCCCccEEEecCcc-----chH-HHHHHHhCCceEEEccccHHHHHHHhccchhhhCCC
Q 043556 91 GNLEELIEEINEKEDEKIDCFIADAYM-----GWT-MRIAEKMKLRRGVVWPSSAASVALCFRIPKLIDDGI 156 (166)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~iI~D~~~-----~~~-~~vA~~l~iP~i~~~~~~~~~~~~~~~~~~l~~~~~ 156 (166)
+.++.+++ +. .+.|.+|.-.-. ... ..+++++++|.++...-+...+...+.+-+-.++|.
T Consensus 182 Pa~~all~----~~-~~idgfi~PGHVstIiG~~~y~~l~~~y~~P~VVaGFEP~DiL~ai~~lv~Q~~~g~ 248 (372)
T 2z1d_A 182 PAVEVLLK----QG-TVFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAGFEPNDVLMAILMLIRMYKEGE 248 (372)
T ss_dssp HHHHHHHH----TS-CCCSEEEEEHHHHHHHTTHHHHHHHHHHCCCEEEECSSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHc----CC-CcCcEEEecCeeeEEeccchhHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHHHHCCC
Confidence 34455554 33 389999865422 122 458999999999999999887776666555445544
No 413
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=35.37 E-value=77 Score=22.39 Aligned_cols=35 Identities=6% Similarity=0.176 Sum_probs=24.7
Q ss_pred CEEEEEcCCC-CCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPA-QGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~-~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++ .|-+ =..++++|+++|++|.++.-.
T Consensus 14 ~k~vlITGa~~~~gi--G~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 14 GKRILLTGLLSNRSI--AYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TCEEEECCCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCCCcH--HHHHHHHHHHcCCCEEEEecc
Confidence 4667777765 1222 257899999999999887643
No 414
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=35.35 E-value=20 Score=28.71 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=24.0
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|+...|+++=.+..| +..|..|++||++|+++=-
T Consensus 1 M~~~DVvIIGgGi~G-----~~~A~~La~~G~~V~llE~ 34 (501)
T 2qcu_A 1 METKDLIVIGGGING-----AGIAADAAGRGLSVLMLEA 34 (501)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEEC
Confidence 555677777555433 5678899999999999854
No 415
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=35.24 E-value=57 Score=23.20 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=25.5
Q ss_pred CEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ-GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++. |-+ =..++++|+++|++|.++...
T Consensus 20 ~k~vlITGas~~~gi--G~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 20 GKVVVVTGASGPKGM--GIEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp TCEEEETTCCSSSSH--HHHHHHHHHHTSCEEEECBSS
T ss_pred CCEEEEECCCCCCCh--HHHHHHHHHHCCCeEEEEeCC
Confidence 46778887762 223 357899999999999887543
No 416
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=35.22 E-value=53 Score=24.57 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+.++++++.++.| -=..++++|+++|++|....
T Consensus 4 ~~k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~ 36 (324)
T 3u9l_A 4 SKKIILITGASSG---FGRLTAEALAGAGHRVYASM 36 (324)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEec
Confidence 3467888877753 23578999999999988754
No 417
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=35.21 E-value=42 Score=25.67 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=30.4
Q ss_pred CCEEEEEc--CCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIP--APAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+++++.+. -+|.|=-.-...||..|+++|.+|.++-.+
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 35555554 466788899999999999999999998755
No 418
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=35.18 E-value=42 Score=23.45 Aligned_cols=41 Identities=15% Similarity=0.006 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcc
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEYN 42 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~ 42 (166)
|...+|+++-+++..-+- +...+..|.++ |++|++++....
T Consensus 1 M~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp --CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CCccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 656789999999876653 33556677777 999999998754
No 419
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=35.09 E-value=60 Score=18.93 Aligned_cols=33 Identities=0% Similarity=-0.251 Sum_probs=20.3
Q ss_pred CCccEEEecCccc--hHHHHHHH-------hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-------MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-------l~iP~i~~~~~~ 138 (166)
.+||+||.|.... .+..+.++ -++|++.+....
T Consensus 44 ~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 44 LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 4689999997543 23333322 368888776543
No 420
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=35.09 E-value=67 Score=22.18 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=33.6
Q ss_pred CCEEEEEcCC-CCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 3 NPHVLVIPAP-AQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p-~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
+.++.++..+ +.|=-.-++.+++.+..+|.+|.++.+..
T Consensus 7 ~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~~ 46 (191)
T 1xx6_A 7 HGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEI 46 (191)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC-
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4678888888 88999999999999999999999998553
No 421
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=35.03 E-value=27 Score=22.02 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=12.9
Q ss_pred HHHHHHHHHCCCEEEEEe
Q 043556 21 LEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 21 l~la~~L~~rGh~Vt~~t 38 (166)
.+...+.++.|.+|.+++
T Consensus 69 ~~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 69 VRQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 344445567799999998
No 422
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=35.02 E-value=23 Score=26.37 Aligned_cols=30 Identities=27% Similarity=0.285 Sum_probs=22.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+|+++-.+..| ..+++.|+++||+|+++..
T Consensus 2 ~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 67777555444 3468889999999999876
No 423
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.89 E-value=20 Score=24.20 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCc
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEY 41 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~ 41 (166)
..||+++-. |.+ =..+++.|.++ |++|+++....
T Consensus 39 ~~~v~IiG~---G~~--G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGM---GRI--GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECC---SHH--HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECC---CHH--HHHHHHHHHhccCCeEEEEECCH
Confidence 347777733 332 25678899999 99999987654
No 424
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=34.88 E-value=32 Score=25.12 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=23.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 467777544433 45788999999999987654
No 425
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=34.87 E-value=32 Score=24.07 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=21.1
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 6 VLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 6 il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++.++ |-+ =..++++|+++|++|+++.-
T Consensus 3 ~vlVtGas-g~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSA-SGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp EEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 34555443 322 35678999999999998864
No 426
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=34.79 E-value=31 Score=26.00 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=26.9
Q ss_pred CEEEEEcCCCC--CChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQ--GHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|++++.+|- |+- +-+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 48999998774 332 67899999999999998653
No 427
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=34.71 E-value=48 Score=24.03 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+++|.++.| -=..+|++|++.|.+|.++.-.
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56788888765 2357899999999999887644
No 428
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=34.70 E-value=36 Score=27.49 Aligned_cols=27 Identities=19% Similarity=-0.044 Sum_probs=21.5
Q ss_pred CCccEEEecCccchHHHHHHHhCCceEEEc
Q 043556 106 EKIDCFIADAYMGWTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 106 ~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~ 135 (166)
.+||++|... ....+|+++|||++.+.
T Consensus 416 ~~pDL~ig~~---~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 416 IKPDLIGSGI---KEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HCCSEEEECH---HHHHHHHHTTCCEEESS
T ss_pred cCCcEEEeCc---chhHHHHHcCCCEEecc
Confidence 4789999853 45789999999999744
No 429
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=34.61 E-value=49 Score=24.52 Aligned_cols=32 Identities=9% Similarity=0.040 Sum_probs=21.7
Q ss_pred CCccEEEecCccc-hHHHHHHHhCCceEEEccc
Q 043556 106 EKIDCFIADAYMG-WTMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~-~~~~vA~~l~iP~i~~~~~ 137 (166)
-+||+||...... ....--++.|||++.+...
T Consensus 83 l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 83 LKPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp TCCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred cCCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 4789999765432 2334446789999998654
No 430
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=34.60 E-value=53 Score=23.87 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=27.2
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+-|++++|.++.| ==..+|++|+++|.+|.++.-.
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 4588999988875 2467888999999999876543
No 431
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=34.57 E-value=62 Score=24.12 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=28.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcchhH
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNHQR 45 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~ 45 (166)
||++..=-|. +--=+..|.+.|.+.| +|+++.+...+..
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg 40 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSA 40 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTT
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 5666555553 3344788999999988 9999999876544
No 432
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.51 E-value=44 Score=26.56 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccchHHHHHHHhCCceEEE
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGWTMRIAEKMKLRRGVV 134 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~~~~vA~~l~iP~i~~ 134 (166)
.++++++. .++|++|.+. ....+|+++|||.+.+
T Consensus 376 ~l~~~i~~------~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN------EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH------SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHh------cCCCEEEeCc---chHHHHHHcCCCEEEe
No 433
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=34.49 E-value=12 Score=29.21 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCC-CEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHG-VRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~t~ 39 (166)
|++.+|+++=.+..| +..|..|+++| ++|+++--
T Consensus 21 m~~~dVvIIGgGiaG-----ls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 21 MPRFDYVVVGAGVVG-----LAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHHHCSCEEEEES
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCcEEEEcc
Confidence 444567777555444 66788999999 99999965
No 434
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=34.38 E-value=47 Score=24.18 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+-|++++|.++.| -=..+|++|+++|.+|.+..-
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3589999998875 236789999999999877543
No 435
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=34.32 E-value=31 Score=26.35 Aligned_cols=39 Identities=8% Similarity=0.076 Sum_probs=28.2
Q ss_pred CCCCEEEEEcCCCCCCh----HHHHHHHHHHHHCCCEEEEEeC
Q 043556 1 MSNPHVLVIPAPAQGHV----IPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~----~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
|++.||+++..+..+=- ..-..+.+.|.+.||+|+.+-.
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i 43 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGI 43 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEE
Confidence 77889988877654432 4445788888889999998764
No 436
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=34.20 E-value=49 Score=25.97 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=0.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (166)
++|.++-.+..| ..+|..|+++||+|+++
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGV 29 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEE
No 437
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=34.18 E-value=22 Score=28.67 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|.+++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 456788888665555 45799999999999988644
No 438
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=34.15 E-value=48 Score=24.46 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEEcc
Q 043556 91 GNLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~ 136 (166)
..+.++++.+++ .+..+|+++..... +..+|++.|++.+.+.+
T Consensus 213 ~~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 213 RQLTEIQEFVKT---YKVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHHHHHHHHHHH---TTCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 446677777664 57899999987653 57799999999987754
No 439
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=34.11 E-value=51 Score=23.97 Aligned_cols=35 Identities=14% Similarity=0.312 Sum_probs=26.6
Q ss_pred CEEEEEcCC--CCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAP--AQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p--~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
++.++++.. +.|=-.-...|++.|+++|.+|.++=
T Consensus 26 m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 26 MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 344444443 45778888999999999999999874
No 440
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=34.08 E-value=53 Score=24.66 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhcCCCCccEEEecCccch--HHHHHHHhCCceEEEccc
Q 043556 92 NLEELIEEINEKEDEKIDCFIADAYMGW--TMRIAEKMKLRRGVVWPS 137 (166)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~iI~D~~~~~--~~~vA~~l~iP~i~~~~~ 137 (166)
.+.++++.+++ .+..+|+++..... +..+|++.|++.+.+.+.
T Consensus 227 ~l~~l~~~ik~---~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~l 271 (312)
T 2o1e_A 227 SLAKLKTYAKE---HNVKVIYFEEIASSKVADTLASEIGAKTEVLNTL 271 (312)
T ss_dssp HHHHHHHHTTS---SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCCT
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHhCCcEEEeccc
Confidence 35666666653 67999999987754 677999999999887543
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=33.97 E-value=72 Score=23.67 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 8 ~k~vlVTGas~g-I--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGANG-V--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTST-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCchH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 467788877743 2 357899999999998877644
No 442
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=33.92 E-value=38 Score=24.46 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.++++++.++.| -=..++++|+++|++|.+...
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 26 TNKVAIVTGASRG---IGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp -CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 3577888877753 235789999999999988643
No 443
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=33.87 E-value=34 Score=23.90 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=22.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++.++ |.+ =..++++|+++|++|.++.-.
T Consensus 8 ~~vlVTGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVTGAG-KGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455566554 333 357899999999999887654
No 444
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=33.62 E-value=35 Score=23.89 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++ |- -=..++++|+++|++|+++.-.
T Consensus 7 ~~~vlVtGas-gg--iG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVTGST-RG--IGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEETTCS-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4667777665 32 2356889999999999987654
No 445
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=33.56 E-value=54 Score=24.03 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 478888887753 236789999999999988753
No 446
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=33.53 E-value=24 Score=26.37 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCC-EEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGV-RVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~t~~ 40 (166)
.++|.|+-.+..| ..+++.|+++|| +|+++...
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 4688888655545 478899999999 99988663
No 447
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=33.46 E-value=40 Score=23.39 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 5 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 38 (223)
T 3uce_A 5 DKTVYVVLGGTSG---IGAELAKQLESEHTIVHVASR 38 (223)
T ss_dssp CCEEEEEETTTSH---HHHHHHHHHCSTTEEEEEESG
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEecC
Confidence 4578888887753 235788999999999988753
No 448
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=33.40 E-value=45 Score=24.17 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=16.9
Q ss_pred HHHHHHHHHCC-CEEEEEeCCc
Q 043556 21 LEFSQCLANHG-VRVTFVNSEY 41 (166)
Q Consensus 21 l~la~~L~~rG-h~Vt~~t~~~ 41 (166)
..++++|.++| |+|+.++-..
T Consensus 19 ~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 19 GSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp HHHHHHHHHHCSSEEEEEESCT
T ss_pred HHHHHHHHhcCCceEEEEEcCC
Confidence 46788899989 9999987543
No 449
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=33.35 E-value=49 Score=23.58 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=25.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 12 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 12 DAVAIVTGAAAG---IGRAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp TCEEEECSCSSH---HHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888877753 2357889999999999887644
No 450
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=33.34 E-value=57 Score=22.39 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=21.6
Q ss_pred CCccEEEecCccc--hHHHHHHH----hCCceEEEccccH
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK----MKLRRGVVWPSSA 139 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~----l~iP~i~~~~~~~ 139 (166)
.+||+||.|...+ .+..+.++ -++|++.+....-
T Consensus 47 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 47 AGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 3689999998654 24444333 4688887765543
No 451
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=33.25 E-value=69 Score=23.95 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~ 40 (166)
|+.++|+++- +.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 22 m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 3345666543 224433 5788899998 9999998754
No 452
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=33.22 E-value=41 Score=20.60 Aligned_cols=32 Identities=19% Similarity=0.026 Sum_probs=18.1
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~ 137 (166)
.+||+||.|.... .+..+.++ -++|++.+...
T Consensus 45 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred cCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 3678888887553 24444333 24676665443
No 453
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=33.09 E-value=61 Score=25.54 Aligned_cols=32 Identities=31% Similarity=0.346 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
..||+++-.+..| +..|+.|+++|++|+..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 3588888776544 3469999999999999754
No 454
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=32.98 E-value=1.2e+02 Score=20.96 Aligned_cols=37 Identities=11% Similarity=0.052 Sum_probs=26.8
Q ss_pred CEEEEEcC----------CCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPA----------PAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~----------p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.||+++-+ ++ -...-+......|...|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G-~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTG-LWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECC-BCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCc-eeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 47888877 33 233556666777888999999999764
No 455
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=32.93 E-value=31 Score=25.84 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
+.+|+++=.+..| +..|..|+++|++|+++--
T Consensus 6 ~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIG-----LSSALILARKGYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEec
Confidence 4678877665444 5678899999999999854
No 456
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=32.92 E-value=32 Score=26.43 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=20.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+|+++=.+..| +..|..|+++|++|+++=
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE 30 (421)
T 3nrn_A 2 RAVVVGAGLGG-----LLAGAFLARNGHEIIVLE 30 (421)
T ss_dssp EEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cEEEECCCHHH-----HHHHHHHHHCCCeEEEEe
Confidence 45555444333 567889999999999984
No 457
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=32.82 E-value=82 Score=23.19 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=24.1
Q ss_pred CEEEEEcCCC-CCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPA-QGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~-~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++ -|-+ =..++++|+++|++|.++.
T Consensus 9 ~k~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNGY--GWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTSH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCcH--HHHHHHHHHHCCCEEEEEe
Confidence 4678888762 2222 3578999999999998874
No 458
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=32.82 E-value=27 Score=24.55 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|...+|+++=.+.. =+..|..|+++|.+|+++...
T Consensus 1 M~~~dVvVVGgG~a-----Gl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 1 MAAYQVLIVGAGFS-----GAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp -CCCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEecC
Confidence 55556666644332 367888999999999998765
No 459
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=32.80 E-value=35 Score=23.43 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=22.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+|+++- +.|.+- ..+++.|+++||+|+++...
T Consensus 2 ~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566663 134332 35788999999999988654
No 460
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=32.76 E-value=37 Score=28.00 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|+..+|+|+-.+.-| +.+|..|+++|++|+++=..
T Consensus 21 M~~~DVvIVGgG~AG-----l~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAG-----SVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHcCCCCEEEEcCC
Confidence 445678877655433 56678889999999998544
No 461
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=32.68 E-value=73 Score=23.00 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCC--CChHHHHH-HHHHHHHCCCEEEEEeCC
Q 043556 2 SNPHVLVIPAPAQ--GHVIPLLE-FSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 2 ~~~~il~~~~p~~--GH~~P~l~-la~~L~~rGh~Vt~~t~~ 40 (166)
..++|+++..... |.-.-+.+ +++.+.+.|++|+++--.
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 3468888877664 55555555 555666789999887543
No 462
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=32.67 E-value=38 Score=27.23 Aligned_cols=27 Identities=22% Similarity=0.043 Sum_probs=21.5
Q ss_pred CCccEEEecCccchHHHHHHHhCCceEEEc
Q 043556 106 EKIDCFIADAYMGWTMRIAEKMKLRRGVVW 135 (166)
Q Consensus 106 ~~~d~iI~D~~~~~~~~vA~~l~iP~i~~~ 135 (166)
.+||++|... ...-+|+++|||.+.+.
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 5799999854 46678999999998654
No 463
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=32.67 E-value=36 Score=24.37 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=24.2
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 7 GKVALVSGGARG-M--GASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 366777766532 2 357889999999999887643
No 464
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=32.65 E-value=66 Score=25.42 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=33.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEeCCcch
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANH-GVRVTFVNSEYNH 43 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~t~~~~~ 43 (166)
.|+++..+|.|=-.-...||..|+.+ |++|.++....+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 46666677789999999999999999 9999999887643
No 465
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=32.59 E-value=50 Score=23.81 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++.| -=..++++|+++|++|.++.
T Consensus 28 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~ 59 (266)
T 3uxy_A 28 GKVALVTGAAGG---IGGAVVTALRAAGARVAVAD 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 477888887753 23578999999999988764
No 466
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=32.58 E-value=32 Score=27.34 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=24.6
Q ss_pred EEEcCCC---CCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 7 LVIPAPA---QGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 7 l~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.+=|++. -||+.| +...+.|++.||++.++....
T Consensus 43 G~dPTg~sLHlGh~v~-l~~l~~lQ~~G~~~i~lIgD~ 79 (432)
T 1h3f_A 43 GADPTRPDLHLGHAVV-LRKMRQFQELGHKVVLIIGDF 79 (432)
T ss_dssp EECTTCCSCBHHHHHH-HHHHHHHHHTTCEEEEEECCC
T ss_pred cccCCCCCCchhhHHH-HHHHHHHHHCCCCEEEEEccc
Confidence 4445542 289996 556678889999999988764
No 467
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=32.49 E-value=55 Score=23.67 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=26.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
-|++++|.++.| -=..++++|++.|.+|.+..-
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~ 43 (242)
T 4b79_A 11 GQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGL 43 (242)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 588999988875 236789999999999988754
No 468
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=32.49 E-value=24 Score=26.00 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=22.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+|+++-.+.-| +..|..|+++|++|+++-..
T Consensus 6 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 6 TDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 467766444323 45777888899999998654
No 469
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=32.49 E-value=37 Score=24.19 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 14 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDG---IGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777766532 2357899999999999987644
No 470
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=32.45 E-value=93 Score=22.93 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=22.1
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
.++|+++ .+ .|-+ =..++++|.++|++|+.+.-
T Consensus 27 ~~~vlVt-Ga-tG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILIT-GG-AGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEE-TT-TSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEE-cC-ccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3455544 22 2433 25788999999999998874
No 471
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=32.37 E-value=88 Score=22.67 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=23.5
Q ss_pred CCccEEE-ecCc-cchHHHHHHHhCCceEEEcc
Q 043556 106 EKIDCFI-ADAY-MGWTMRIAEKMKLRRGVVWP 136 (166)
Q Consensus 106 ~~~d~iI-~D~~-~~~~~~vA~~l~iP~i~~~~ 136 (166)
.++|+|+ .+.. ...+..+|+++++|.+...-
T Consensus 99 ~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk 131 (243)
T 3dez_A 99 PEVEVIAGTATAGIPHGAIIADKMNLPLAYIRS 131 (243)
T ss_dssp TTCCEEEEETTTTHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEecCchHHHHHHHHHHcCCCEEEEEE
Confidence 3689888 4443 35688999999999887654
No 472
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=32.32 E-value=1.1e+02 Score=20.69 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=30.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
.-+.++-..+.|=-.-+..|++.|..+|.+|.++....
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 34666666777888888899999999999999888654
No 473
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=32.31 E-value=60 Score=22.20 Aligned_cols=34 Identities=26% Similarity=0.190 Sum_probs=24.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNS 39 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~ 39 (166)
-|+++. +..|+..-+..+++.|+++|++|..+--
T Consensus 28 ~vv~~h-G~~~~~~~~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 28 VVLCIH-GILEQGLAWQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp EEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred EEEEEC-CCCcccchHHHHHHHhhhcCeEEEEECC
Confidence 344444 4446666677899999999999988753
No 474
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.29 E-value=37 Score=23.97 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=23.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++.++. - -=..++++|+++|++|.++.-.
T Consensus 14 k~vlItGasg-g--iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQ-N--IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5566666553 2 2357899999999999987654
No 475
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=32.28 E-value=32 Score=26.81 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=21.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+|+|+=.+--| +.+|..|+++|++|+++--.
T Consensus 24 ~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 24 RIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp EEEEECCHHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 55555333323 56888999999999999643
No 476
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=32.27 E-value=42 Score=25.44 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=27.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-++++..+..|.-.-+..+++.|+++|+.|..+-..
T Consensus 99 P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~ 134 (383)
T 3d59_A 99 PLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHR 134 (383)
T ss_dssp EEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccC
Confidence 455666666666666788999999999998776554
No 477
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=32.26 E-value=76 Score=19.34 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=18.3
Q ss_pred CCccEEEecCccc--hHHHHHHH-----hCCceEEEcc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWP 136 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~ 136 (166)
.+||+||.|...+ .+..+.++ ..+|.+.+..
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 83 (136)
T 1mvo_A 46 EKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTA 83 (136)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEEC
Confidence 3689999997553 24443333 3467766644
No 478
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.16 E-value=67 Score=22.61 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+.+.++++.++.| -=..++++|+++|++|.++.
T Consensus 12 ~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 12 SQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 3577788777743 23588999999999998876
No 479
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=32.14 E-value=53 Score=26.62 Aligned_cols=26 Identities=23% Similarity=0.471 Sum_probs=20.8
Q ss_pred CChHHHHH---HHHHHHHCCCEEEEEeCC
Q 043556 15 GHVIPLLE---FSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 15 GH~~P~l~---la~~L~~rGh~Vt~~t~~ 40 (166)
||....+- +++.|..+|++|.+++.-
T Consensus 43 GH~r~~v~~D~laR~lr~~G~~V~~~~g~ 71 (536)
T 4dlp_A 43 GHAYELIATDAMARFQRLNGMDVYFLTGT 71 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred chhHHHHHHHHHHHHHHhcCCcEEEecCc
Confidence 77766654 788888999999998764
No 480
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.08 E-value=38 Score=23.83 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=24.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++ |- -=..++++|+++|++|.++.-.
T Consensus 11 ~k~vlITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 11 GACAAVTGAG-SG--IGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3566777655 32 2357899999999999987654
No 481
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=32.00 E-value=40 Score=23.20 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=22.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHH-HCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLA-NHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~-~rGh~Vt~~t~~ 40 (166)
++.++++.++ |-+ =..++++|+ ++||+|+.+.-.
T Consensus 5 mk~vlVtGas-g~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHH--HHHHHHHHHhcCCceEEEEecC
Confidence 3544454433 322 367889999 899999988754
No 482
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=31.92 E-value=36 Score=27.33 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFV 37 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (166)
+++|.++-.+..| +.+|..|+++||+|+++
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~ 37 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCL 37 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEE
No 483
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.90 E-value=62 Score=23.52 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=27.4
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
-|++++|.++.| -=..+++.|+++|.+|.+..-.
T Consensus 9 GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r~ 42 (247)
T 4hp8_A 9 GRKALVTGANTG---LGQAIAVGLAAAGAEVVCAARR 42 (247)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeCC
Confidence 589999998875 2367889999999999887644
No 484
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=31.89 E-value=39 Score=23.83 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 13 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 13 TGKTSLITGASSG---IGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3466777777643 2367899999999999987654
No 485
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=31.87 E-value=90 Score=21.62 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=24.5
Q ss_pred EEEEEcCCCCC----ChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQG----HVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.|.++.....| +..-..+|++.|+++|+. +++..
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~--lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIG--LVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCE--EEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCE--EEECC
Confidence 57788776643 456788899999999976 45553
No 486
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=31.86 E-value=53 Score=22.78 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=26.3
Q ss_pred CCCCCChHHHHHHHHHHHHCCCEEEEEeCCc
Q 043556 11 APAQGHVIPLLEFSQCLANHGVRVTFVNSEY 41 (166)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~ 41 (166)
-++.|=-.-...||..|+++|.+|.++=...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 11 KGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3566888999999999999999999987654
No 487
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=31.72 E-value=91 Score=21.02 Aligned_cols=34 Identities=3% Similarity=0.090 Sum_probs=26.6
Q ss_pred cCCCCCChHHHHHHHHHHHHCCCEEEEEeCCcch
Q 043556 10 PAPAQGHVIPLLEFSQCLANHGVRVTFVNSEYNH 43 (166)
Q Consensus 10 ~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~~~~ 43 (166)
.....|.-.-+++.++.++++|..|..+|.....
T Consensus 115 ~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s 148 (196)
T 2yva_A 115 AISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGG 148 (196)
T ss_dssp EECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred EEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 3334477788899999999999999988887543
No 488
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=31.72 E-value=1.1e+02 Score=20.71 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=34.0
Q ss_pred CCCCEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEeCCcchhHHH
Q 043556 1 MSNPHVLVIPAPAQ-GHVIPLLEFSQCLANHGVRVTFVNSEYNHQRVL 47 (166)
Q Consensus 1 ~~~~~il~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~t~~~~~~~~~ 47 (166)
|+..++.++-+.+. =-+.|-+-+|..-+.-|++|+++-+..-...++
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~ 49 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLR 49 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGB
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhc
Confidence 55556666655543 445788889999999999999998876554443
No 489
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=31.70 E-value=46 Score=20.88 Aligned_cols=36 Identities=19% Similarity=0.042 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 3 NPHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 3 ~~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
+++|++++..|.|--.-.-.+-+...++|.+|.+..
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 578999999886544433444445556788888755
No 490
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=31.69 E-value=39 Score=23.76 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=24.0
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++ |.+ =..++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 7 GKRVLITGSS-QGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp TCEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEECCC
Confidence 3556676655 333 357899999999999987654
No 491
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=31.57 E-value=1e+02 Score=20.56 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=24.4
Q ss_pred CCChHHHHHHHHHHHHCCCEEEEEeCCcc
Q 043556 14 QGHVIPLLEFSQCLANHGVRVTFVNSEYN 42 (166)
Q Consensus 14 ~GH~~P~l~la~~L~~rGh~Vt~~t~~~~ 42 (166)
.|...-++..++.+.++|..|..+|....
T Consensus 89 sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 117 (186)
T 1m3s_A 89 SGETKSLIHTAAKAKSLHGIVAALTINPE 117 (186)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36667889999999999999999988654
No 492
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=31.54 E-value=39 Score=23.67 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=23.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 5 HVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 5 ~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
+.++++.++ |-+ =..++++|+++|++|.++.-.
T Consensus 3 k~vlItGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 3 RVAIVTGAS-SGN--GLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455666555 322 357899999999999987643
No 493
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=31.53 E-value=65 Score=23.88 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEe
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVN 38 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t 38 (166)
.++++++.++.| -=..++++|+++|++|.++.
T Consensus 46 gk~~lVTGas~G---IG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 46 GKVAFITGAARG---QGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCeEEEEe
Confidence 478888887753 23678999999999999874
No 494
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=31.50 E-value=67 Score=19.77 Aligned_cols=32 Identities=9% Similarity=-0.079 Sum_probs=20.1
Q ss_pred CCccEEEecCccc--hHHHHHHH------hCCceEEEccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK------MKLRRGVVWPS 137 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~------l~iP~i~~~~~ 137 (166)
.+||+||.|..++ .+..+.++ ..+|.+.+...
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 4689999998764 24444333 24677766554
No 495
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=31.47 E-value=40 Score=23.68 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|+++.-.
T Consensus 6 ~k~vlVtGasgg---iG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 6 GKVAIITGGTLG---IGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356667766532 2357899999999999987654
No 496
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=31.47 E-value=39 Score=23.99 Aligned_cols=34 Identities=3% Similarity=0.002 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777776642 2368899999999999887643
No 497
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=31.46 E-value=36 Score=26.31 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCCCCh----HHHHHHHHHHHHCCCEEEEEeCC
Q 043556 1 MSNPHVLVIPAPAQGHV----IPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 1 ~~~~~il~~~~p~~GH~----~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
|++.||+++..+..+=- ..-..+++.|.+.|++|+.+-..
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 77788888876654332 44457888888899999987643
No 498
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=31.42 E-value=98 Score=19.40 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=19.4
Q ss_pred CccEEEecCccc--hHHHHHHH-----hCCceEEEcccc
Q 043556 107 KIDCFIADAYMG--WTMRIAEK-----MKLRRGVVWPSS 138 (166)
Q Consensus 107 ~~d~iI~D~~~~--~~~~vA~~-----l~iP~i~~~~~~ 138 (166)
++|+||.|.... .+..+.++ -++|++.+....
T Consensus 48 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 86 (151)
T 3kcn_A 48 PFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ 86 (151)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC
Confidence 469999997653 24444333 347777665543
No 499
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=31.40 E-value=39 Score=23.93 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEeCC
Q 043556 4 PHVLVIPAPAQGHVIPLLEFSQCLANHGVRVTFVNSE 40 (166)
Q Consensus 4 ~~il~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~t~~ 40 (166)
.+.++++.++. -+ =..++++|+++|++|.++.-.
T Consensus 12 ~k~vlVTGasg-gi--G~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 12 GLVAVITGGAS-GL--GLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeCC
Confidence 35667776653 22 368899999999999987643
No 500
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=31.39 E-value=54 Score=20.48 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=19.9
Q ss_pred CCccEEEecCccc--hHHHHHHH-------hCCceEEEcccc
Q 043556 106 EKIDCFIADAYMG--WTMRIAEK-------MKLRRGVVWPSS 138 (166)
Q Consensus 106 ~~~d~iI~D~~~~--~~~~vA~~-------l~iP~i~~~~~~ 138 (166)
.+||+||.|.... .+..+.++ .++|++.+....
T Consensus 51 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 51 THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 3689999997553 24443332 357777766543
Done!