Query 043563
Match_columns 279
No_of_seqs 205 out of 1238
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:14:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043563.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043563hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 3.8E-59 8.2E-64 424.5 25.6 257 1-264 82-345 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.2E-57 4.8E-62 409.1 25.3 255 1-264 54-314 (315)
3 cd01847 Triacylglycerol_lipase 100.0 8.3E-50 1.8E-54 354.4 19.7 221 16-263 55-279 (281)
4 PRK15381 pathogenicity island 100.0 5.9E-45 1.3E-49 333.7 21.0 200 22-263 197-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 8.3E-44 1.8E-48 313.9 20.2 214 21-263 55-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.4E-32 3.1E-37 243.3 14.4 223 21-264 106-332 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 4.1E-23 8.8E-28 176.4 12.4 186 21-261 41-234 (234)
8 cd01824 Phospholipase_B_like P 99.1 1.1E-09 2.4E-14 97.5 13.8 184 22-264 83-282 (288)
9 cd01836 FeeA_FeeB_like SGNH_hy 99.1 7E-10 1.5E-14 92.4 10.6 121 77-264 67-188 (191)
10 cd01834 SGNH_hydrolase_like_2 99.1 3.6E-09 7.8E-14 87.6 13.3 130 77-264 61-191 (191)
11 cd01841 NnaC_like NnaC (CMP-Ne 99.0 5.4E-09 1.2E-13 85.8 13.0 121 77-263 51-172 (174)
12 cd01839 SGNH_arylesterase_like 99.0 2.8E-09 6.1E-14 90.2 11.3 120 77-264 79-204 (208)
13 cd01833 XynB_like SGNH_hydrola 99.0 4E-09 8.6E-14 85.1 10.9 116 77-264 40-156 (157)
14 cd01828 sialate_O-acetylestera 99.0 7.8E-09 1.7E-13 84.4 11.6 117 77-263 48-166 (169)
15 cd01829 SGNH_hydrolase_peri2 S 99.0 1.7E-08 3.7E-13 84.6 13.6 139 77-264 59-197 (200)
16 cd04501 SGNH_hydrolase_like_4 99.0 1.8E-08 3.9E-13 83.3 13.4 123 77-263 59-181 (183)
17 cd04502 SGNH_hydrolase_like_7 98.9 2.4E-08 5.2E-13 81.8 13.2 119 77-263 50-169 (171)
18 cd04506 SGNH_hydrolase_YpmR_li 98.9 3.7E-08 8.1E-13 82.9 14.5 134 77-263 68-203 (204)
19 cd00229 SGNH_hydrolase SGNH_hy 98.9 1.4E-08 2.9E-13 81.9 11.3 122 76-263 64-186 (187)
20 cd01830 XynE_like SGNH_hydrola 98.9 3.3E-08 7.1E-13 83.5 12.4 127 78-262 75-201 (204)
21 cd01832 SGNH_hydrolase_like_1 98.9 2.5E-08 5.5E-13 82.4 11.2 117 77-263 67-184 (185)
22 cd01823 SEST_like SEST_like. A 98.8 4.7E-08 1E-12 85.4 12.6 159 77-263 80-258 (259)
23 cd01827 sialate_O-acetylestera 98.8 5.4E-08 1.2E-12 80.8 11.9 119 77-264 67-186 (188)
24 cd01820 PAF_acetylesterase_lik 98.8 4.3E-08 9.3E-13 83.5 10.6 120 77-264 89-209 (214)
25 cd01844 SGNH_hydrolase_like_6 98.8 2.3E-07 5E-12 76.5 13.3 118 77-263 57-175 (177)
26 cd01838 Isoamyl_acetate_hydrol 98.8 7.2E-08 1.6E-12 80.3 10.4 133 77-263 63-197 (199)
27 PRK10528 multifunctional acyl- 98.7 8.1E-08 1.8E-12 80.4 10.5 111 77-264 71-182 (191)
28 PF13472 Lipase_GDSL_2: GDSL-l 98.7 6.2E-08 1.4E-12 78.4 9.4 119 77-257 61-179 (179)
29 cd01835 SGNH_hydrolase_like_3 98.7 3.3E-07 7E-12 76.5 12.0 123 77-263 69-191 (193)
30 cd01822 Lysophospholipase_L1_l 98.7 4.3E-07 9.4E-12 74.3 11.8 112 77-264 64-175 (177)
31 cd01821 Rhamnogalacturan_acety 98.6 2E-07 4.3E-12 78.2 8.3 131 77-263 65-196 (198)
32 cd01826 acyloxyacyl_hydrolase_ 98.6 6.5E-07 1.4E-11 79.1 11.2 149 78-263 123-304 (305)
33 cd01825 SGNH_hydrolase_peri1 S 98.4 5.6E-07 1.2E-11 74.5 7.3 128 77-264 56-184 (189)
34 cd01840 SGNH_hydrolase_yrhL_li 98.4 2.8E-06 6E-11 68.3 10.8 23 241-263 126-148 (150)
35 cd01831 Endoglucanase_E_like E 98.3 4.9E-06 1.1E-10 68.0 9.8 110 78-263 56-166 (169)
36 KOG3035 Isoamyl acetate-hydrol 98.2 8.2E-06 1.8E-10 68.1 8.1 139 77-264 68-207 (245)
37 KOG3670 Phospholipase [Lipid t 97.6 0.0014 3E-08 59.8 12.4 80 44-139 159-238 (397)
38 COG2755 TesA Lysophospholipase 97.4 0.0016 3.6E-08 55.0 10.8 24 241-264 184-207 (216)
39 PF14606 Lipase_GDSL_3: GDSL-l 97.0 0.0046 1E-07 50.9 8.2 116 77-263 59-175 (178)
40 COG2845 Uncharacterized protei 96.7 0.021 4.6E-07 50.8 10.3 136 77-264 177-316 (354)
41 cd01842 SGNH_hydrolase_like_5 94.7 0.53 1.1E-05 38.7 10.2 127 79-263 52-180 (183)
42 PF08885 GSCFA: GSCFA family; 87.5 4.1 8.8E-05 35.6 8.5 141 75-260 99-250 (251)
43 PF02633 Creatininase: Creatin 78.7 13 0.00029 31.9 8.2 84 82-201 61-144 (237)
44 PLN02757 sirohydrochlorine fer 78.1 7.7 0.00017 31.2 6.1 64 119-204 60-126 (154)
45 cd04824 eu_ALAD_PBGS_cysteine_ 71.6 6.8 0.00015 35.1 4.5 64 115-194 49-114 (320)
46 COG3240 Phospholipase/lecithin 71.5 4.3 9.3E-05 37.2 3.3 70 75-150 96-165 (370)
47 PRK13384 delta-aminolevulinic 70.9 18 0.0004 32.5 7.0 63 115-194 59-121 (322)
48 cd00384 ALAD_PBGS Porphobilino 68.6 23 0.00051 31.8 7.2 63 115-194 49-111 (314)
49 cd04823 ALAD_PBGS_aspartate_ri 68.1 21 0.00046 32.1 6.9 64 115-194 52-116 (320)
50 cd03416 CbiX_SirB_N Sirohydroc 67.9 14 0.00031 26.9 5.1 51 121-193 48-98 (101)
51 PRK09283 delta-aminolevulinic 65.9 17 0.00038 32.7 5.9 63 115-194 57-119 (323)
52 PF00490 ALAD: Delta-aminolevu 61.9 35 0.00076 30.8 7.0 64 116-194 56-119 (324)
53 PF13839 PC-Esterase: GDSL/SGN 60.5 1.1E+02 0.0023 26.1 11.1 116 77-203 100-222 (263)
54 PF01903 CbiX: CbiX; InterPro 59.3 7.8 0.00017 28.5 2.2 51 122-194 42-92 (105)
55 PF04914 DltD_C: DltD C-termin 58.3 26 0.00057 27.3 5.1 73 173-263 38-125 (130)
56 KOG2794 Delta-aminolevulinic a 51.9 22 0.00048 31.3 4.0 65 115-194 67-131 (340)
57 PF08331 DUF1730: Domain of un 49.8 43 0.00093 23.4 4.7 65 129-193 9-77 (78)
58 PF08029 HisG_C: HisG, C-termi 49.1 16 0.00036 25.5 2.4 21 119-139 52-72 (75)
59 cd03414 CbiX_SirB_C Sirohydroc 48.6 73 0.0016 23.7 6.2 51 119-193 47-97 (117)
60 COG0113 HemB Delta-aminolevuli 48.4 39 0.00084 30.3 5.0 65 115-194 59-123 (330)
61 PF02896 PEP-utilizers_C: PEP- 47.3 34 0.00074 30.6 4.7 18 78-95 196-213 (293)
62 TIGR03455 HisG_C-term ATP phos 46.8 26 0.00057 25.9 3.3 23 117-139 74-96 (100)
63 COG3581 Uncharacterized protei 46.4 26 0.00057 32.5 3.8 47 125-195 327-373 (420)
64 COG4531 ZnuA ABC-type Zn2+ tra 43.9 61 0.0013 28.7 5.4 51 157-213 177-231 (318)
65 COG0646 MetH Methionine syntha 41.6 90 0.0019 28.0 6.2 109 112-220 138-297 (311)
66 cd03412 CbiK_N Anaerobic cobal 41.0 1.1E+02 0.0024 23.5 6.1 52 117-193 56-107 (127)
67 PF06908 DUF1273: Protein of u 40.5 80 0.0017 26.0 5.5 27 112-138 24-50 (177)
68 PRK13660 hypothetical protein; 39.0 1.9E+02 0.0041 23.9 7.5 58 112-196 24-81 (182)
69 KOG4079 Putative mitochondrial 36.0 17 0.00036 28.5 0.8 16 128-143 42-57 (169)
70 PRK13717 conjugal transfer pro 33.1 80 0.0017 24.5 4.1 26 159-184 70-95 (128)
71 TIGR01091 upp uracil phosphori 31.5 1.7E+02 0.0036 24.6 6.3 49 117-196 136-184 (207)
72 PF06812 ImpA-rel_N: ImpA-rela 28.7 22 0.00047 23.7 0.3 8 243-250 53-60 (62)
73 TIGR02744 TrbI_Ftype type-F co 27.7 99 0.0021 23.5 3.7 26 159-184 57-82 (112)
74 PF00478 IMPDH: IMP dehydrogen 27.3 2.6E+02 0.0057 25.7 7.1 98 45-204 70-169 (352)
75 COG1903 CbiD Cobalamin biosynt 27.1 4.1E+02 0.0089 24.6 8.2 89 28-140 167-257 (367)
76 cd00419 Ferrochelatase_C Ferro 26.6 2.2E+02 0.0048 22.1 5.8 36 121-169 81-116 (135)
77 PRK00129 upp uracil phosphorib 25.7 2.4E+02 0.0052 23.6 6.2 49 117-196 138-186 (209)
78 COG1402 Uncharacterized protei 25.4 1E+02 0.0022 27.0 3.9 25 114-138 87-111 (250)
79 cd03411 Ferrochelatase_N Ferro 25.2 85 0.0018 25.1 3.3 24 119-142 101-124 (159)
80 COG0276 HemH Protoheme ferro-l 23.4 2.8E+02 0.006 25.2 6.4 76 119-204 104-201 (320)
81 COG1209 RfbA dTDP-glucose pyro 22.4 4.1E+02 0.0089 23.7 7.0 82 122-214 37-148 (286)
82 COG1080 PtsA Phosphoenolpyruva 21.1 76 0.0017 31.1 2.5 19 76-95 443-461 (574)
83 cd03413 CbiK_C Anaerobic cobal 20.6 1.2E+02 0.0026 22.4 3.0 18 120-137 45-62 (103)
84 PRK06520 5-methyltetrahydropte 20.2 1.8E+02 0.0039 26.8 4.7 37 107-144 160-196 (368)
85 cd01823 SEST_like SEST_like. A 20.1 2E+02 0.0044 24.4 4.9 39 160-198 120-158 (259)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=3.8e-59 Score=424.48 Aligned_cols=257 Identities=28% Similarity=0.515 Sum_probs=222.0
Q ss_pred CCCCC-CCCCCCCCcc---cCCCCCCcceecccccccCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhc
Q 043563 1 EFLGL-PYSPPFLSYK---RDLLPLTGLNYASGSCGILPETGSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYL 76 (279)
Q Consensus 1 ~~lgl-~~~ppyl~~~---~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~ 76 (279)
+.||| |++||||++. .++ .+|+|||+|||++++.++. ....++|.+||++|+++++++....| ...+++..
T Consensus 82 ~~lGl~p~~ppyl~~~~~~~~~--~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g--~~~~~~~~ 156 (351)
T PLN03156 82 EAFGLKPAIPAYLDPSYNISDF--ATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLG--EEKANEII 156 (351)
T ss_pred HHhCCCCCCCCCcCcccCchhh--cccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhC--hHHHHHHH
Confidence 46899 7999999864 579 9999999999999876652 22367899999999999888776666 55556678
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccC-CC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNK-HT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~-~~ 155 (279)
+++||+||||+|||+..|+..+. .....+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... ..
T Consensus 157 ~~sL~~i~iG~NDy~~~~~~~~~--~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~ 234 (351)
T PLN03156 157 SEALYLISIGTNDFLENYYTFPG--RRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGG 234 (351)
T ss_pred hcCeEEEEecchhHHHHhhcccc--ccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCC
Confidence 99999999999999865643211 1223457789999999999999999999999999999999999998765321 13
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc-cccCccccCCCC-C
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA-FFNGTSGCIPYL-R 233 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~-~~~~~~~C~~~~-~ 233 (279)
.+|.+.+|.+++.||++|++++++|++++||++|+++|+|+++.++++||++|||++++++|||. .++....|++.. .
T Consensus 235 ~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~ 314 (351)
T PLN03156 235 SECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPF 314 (351)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999987 777778899765 5
Q ss_pred CCCCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 234 PCNNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 234 ~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
.|++|++|+|||++||||++|+++|+.++++
T Consensus 315 ~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~ 345 (351)
T PLN03156 315 TCSDADKYVFWDSFHPTEKTNQIIANHVVKT 345 (351)
T ss_pred ccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999986
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.2e-57 Score=409.09 Aligned_cols=255 Identities=38% Similarity=0.690 Sum_probs=220.6
Q ss_pred CCCCCCC-CCCCCCcc--cCCCCCCcceecccccccCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcc
Q 043563 1 EFLGLPY-SPPFLSYK--RDLLPLTGLNYASGSCGILPETGSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLS 77 (279)
Q Consensus 1 ~~lgl~~-~ppyl~~~--~~~~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~ 77 (279)
+.||+|. +|||+... .++ .+|+|||+|||++.+.+.. ...+++|..||++|+++++++....| +..+.+..+
T Consensus 54 ~~lgl~~~~p~~~~~~~~~~~--~~G~NfA~gGA~~~~~~~~-~~~~~~l~~Qv~~F~~~~~~~~~~~g--~~~~~~~~~ 128 (315)
T cd01837 54 EALGLPLLPPPYLSPNGSSDF--LTGVNFASGGAGILDSTGF-LGSVISLSVQLEYFKEYKERLRALVG--EEAAADILS 128 (315)
T ss_pred hhccCCCCCCCccCccccchh--hccceecccCCccccCCcc-eeeeecHHHHHHHHHHHHHHHHHhhC--HHHHHHHHh
Confidence 4689995 77787765 468 8999999999999887652 23468999999999999888777777 666778889
Q ss_pred cceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccC-CCC
Q 043563 78 KSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNK-HTG 156 (279)
Q Consensus 78 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~-~~~ 156 (279)
++||+||||+|||+..+.... ....+..++++.+++++.++|++||++|||||+|+|+||+||+|..+.... ...
T Consensus 129 ~sL~~i~iG~ND~~~~~~~~~----~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~ 204 (315)
T cd01837 129 KSLFLISIGSNDYLNNYFANP----TRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGG 204 (315)
T ss_pred CCEEEEEecccccHHHHhcCc----cccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCC
Confidence 999999999999986553321 002356789999999999999999999999999999999999999876531 135
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc-cccCccccCCC-CCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA-FFNGTSGCIPY-LRP 234 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~-~~~~~~~C~~~-~~~ 234 (279)
+|.+.+|++++.||++|++++++|++++|+++|+++|+|++++++++||++|||++++++||+. .++....|... ..+
T Consensus 205 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~ 284 (315)
T cd01837 205 GCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTV 284 (315)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCCc
Confidence 7999999999999999999999999999999999999999999999999999999999999987 55556678764 568
Q ss_pred CCCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 235 CNNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 235 C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
|++|++|+|||++|||+++|++||+.+++|
T Consensus 285 C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 285 CPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred CCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999875
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=8.3e-50 Score=354.37 Aligned_cols=221 Identities=20% Similarity=0.270 Sum_probs=183.1
Q ss_pred cCCCCCCcceecccccccCCCCCCC--CccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhH
Q 043563 16 RDLLPLTGLNYASGSCGILPETGSP--FGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINN 93 (279)
Q Consensus 16 ~~~~~~~g~NfA~gGA~~~~~~~~~--~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~ 93 (279)
.++ .+|+|||+|||++.+.+... ....++|.+||++|++.+. ...+++||+||+|+|||+..
T Consensus 55 ~~~--~~G~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~--------------~~~~~sL~~i~iG~ND~~~~ 118 (281)
T cd01847 55 PTT--PGGTNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG--------------GFDPNALYTVWIGGNDLIAA 118 (281)
T ss_pred ccC--CCCceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC--------------CCCCCeEEEEecChhHHHHH
Confidence 567 89999999999998865421 1235799999999987541 23689999999999999976
Q ss_pred hhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHH
Q 043563 94 YLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNML 173 (279)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L 173 (279)
+..... ......++.++++.+++++..++++|+++|||+|+|+++||+||+|..+... ..|.+.++.++..||++|
T Consensus 119 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---~~~~~~~n~~~~~~N~~L 194 (281)
T cd01847 119 LAALTT-ATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---AAAAALASALSQTYNQTL 194 (281)
T ss_pred Hhhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---chhHHHHHHHHHHHHHHH
Confidence 543221 0111233568899999999999999999999999999999999999987652 468899999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc-cccCccccCCC-CCCCCCCCCceeecCCCccH
Q 043563 174 PAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA-FFNGTSGCIPY-LRPCNNTNKHYFWDGYHPTE 251 (279)
Q Consensus 174 ~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~-~~~~~~~C~~~-~~~C~~~~~y~fwD~~HPT~ 251 (279)
++++++|+.+ +|+++|+|.++.++++||++|||++++++||+. ... .|+.. ...|.+|++|+|||++||||
T Consensus 195 ~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~~~---~~~~~~~~~c~~~~~y~fwD~~HpTe 267 (281)
T cd01847 195 QSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTNTTTPACTSTSAA---GSGAATLVTAAAQSTYLFADDVHPTP 267 (281)
T ss_pred HHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccCCCccccCCCCcc---ccccccccCCCCccceeeccCCCCCH
Confidence 9999998754 899999999999999999999999999999985 222 24432 24799999999999999999
Q ss_pred HHHHHHHHHHhc
Q 043563 252 DVYSILASGCIN 263 (279)
Q Consensus 252 ~~h~~ia~~~~~ 263 (279)
++|++||+++++
T Consensus 268 ~~~~~ia~~~~~ 279 (281)
T cd01847 268 AGHKLIAQYALS 279 (281)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=5.9e-45 Score=333.73 Aligned_cols=200 Identities=16% Similarity=0.184 Sum_probs=170.2
Q ss_pred CcceecccccccCCCCCCC-C-ccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhccc
Q 043563 22 TGLNYASGSCGILPETGSP-F-GRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSL 99 (279)
Q Consensus 22 ~g~NfA~gGA~~~~~~~~~-~-~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 99 (279)
+|+|||+|||+++...... . ...++|.+||++|+. .+++||+||+|+|||+ ++.
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-------------------~~~aL~lV~iG~NDy~-~~~---- 252 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-------------------SHQDLAIFLLGANDYM-TLH---- 252 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHh-------------------cCCcEEEEEeccchHH-HhH----
Confidence 6899999999997321110 0 124689999998542 1579999999999998 341
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHH
Q 043563 100 YDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQN 179 (279)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~ 179 (279)
.++++.+++++..+|++||++|||||+|+|+||+||+|..+.. ...+.+|.++..||++|+++|++
T Consensus 253 ---------~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----~~~~~~N~~a~~fN~~L~~~L~~ 318 (408)
T PRK15381 253 ---------KDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----DEKRKLKDESIAHNALLKTNVEE 318 (408)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----CchHHHHHHHHHHHHHHHHHHHH
Confidence 2357789999999999999999999999999999999988742 23578999999999999999999
Q ss_pred HHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc-cccCccccCCCCCCCCCCCCceeecCCCccHHHHHHHH
Q 043563 180 LTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA-FFNGTSGCIPYLRPCNNTNKHYFWDGYHPTEDVYSILA 258 (279)
Q Consensus 180 l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~-~~~~~~~C~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia 258 (279)
|++++||++|+++|+|+++.++++||++|||++++. ||+. ..++...|.+....|. +|+|||.+|||+++|+++|
T Consensus 319 L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA 394 (408)
T PRK15381 319 LKEKYPQHKICYYETADAFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFA 394 (408)
T ss_pred HHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcccc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHH
Confidence 999999999999999999999999999999999886 9986 4555567888777894 9999999999999999999
Q ss_pred HHHhc
Q 043563 259 SGCIN 263 (279)
Q Consensus 259 ~~~~~ 263 (279)
+.+-+
T Consensus 395 ~~~~~ 399 (408)
T PRK15381 395 IMLES 399 (408)
T ss_pred HHHHH
Confidence 98765
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=8.3e-44 Score=313.87 Aligned_cols=214 Identities=25% Similarity=0.367 Sum_probs=182.6
Q ss_pred CCcceecccccccCCCCCC-CCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhccc
Q 043563 21 LTGLNYASGSCGILPETGS-PFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSL 99 (279)
Q Consensus 21 ~~g~NfA~gGA~~~~~~~~-~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 99 (279)
..|+|||+|||++...... ......++..||++|++..+. +..+++||+||+|+||+...+..
T Consensus 55 ~~~~N~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-------------~~~~~~l~~i~~G~ND~~~~~~~--- 118 (270)
T cd01846 55 KQGYNYAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-------------RLPPDTLVAIWIGANDLLNALDL--- 118 (270)
T ss_pred CCcceeEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-------------CCCCCcEEEEEeccchhhhhccc---
Confidence 4899999999999876542 123357999999999876531 35578999999999999854321
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHH
Q 043563 100 YDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQN 179 (279)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~ 179 (279)
......+++.+++++.++|++|+++|+|+|+|+++||++|+|..+.... ...+.++.+++.||++|++++++
T Consensus 119 -----~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~---~~~~~~~~~~~~~N~~L~~~l~~ 190 (270)
T cd01846 119 -----PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD---AVAARATALTAAYNAKLAEKLAE 190 (270)
T ss_pred -----cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence 1123456788999999999999999999999999999999999986532 11268999999999999999999
Q ss_pred HHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCCCCCCceeecCCCccHHHHHHHHH
Q 043563 180 LTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCNNTNKHYFWDGYHPTEDVYSILAS 259 (279)
Q Consensus 180 l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~ 259 (279)
|++++|+.+|+++|+|.++.++++||++|||+++.++||+. + .|.+....|.+|++|+|||++|||+++|++||+
T Consensus 191 l~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~~~~~C~~~--~---~~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~ 265 (270)
T cd01846 191 LKAQHPGVNILLFDTNALFNDILDNPAAYGFTNVTDPCLDY--V---YSYSPREACANPDKYLFWDEVHPTTAVHQLIAE 265 (270)
T ss_pred HHHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCcCcchhcCC--C---ccccccCCCCCccceEEecCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999985 2 177777789999999999999999999999999
Q ss_pred HHhc
Q 043563 260 GCIN 263 (279)
Q Consensus 260 ~~~~ 263 (279)
.+++
T Consensus 266 ~~~~ 269 (270)
T cd01846 266 EVAA 269 (270)
T ss_pred HHHh
Confidence 9876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=243.33 Aligned_cols=223 Identities=23% Similarity=0.294 Sum_probs=170.9
Q ss_pred CCcceecccccccCCCC--CCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhcc
Q 043563 21 LTGLNYASGSCGILPET--GSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETS 98 (279)
Q Consensus 21 ~~g~NfA~gGA~~~~~~--~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~ 98 (279)
..|.|||+|||++...+ ........++.+|+.+|+...... .++- ....-....+.|+.+|.|+||++..-..+
T Consensus 106 a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~-~~~~~~l~p~~l~~~~ggand~~~~~~~~- 181 (370)
T COG3240 106 AGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWP-NYPAQGLDPSALYFLWGGANDYLALPMLK- 181 (370)
T ss_pred cccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccc-cccccccCHHHHHHHhhcchhhhcccccc-
Confidence 58999999999997665 212234578999999999865421 0000 01111234667899999999997421111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHH
Q 043563 99 LYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQ 178 (279)
Q Consensus 99 ~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~ 178 (279)
....+.+......++.+.|++|.+.|||+|+|+++|+++.+|..... +.-...+.+++..||..|...|+
T Consensus 182 ------a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~----~~~~~~a~~~t~~~Na~L~~~L~ 251 (370)
T COG3240 182 ------AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAY----GTEAIQASQATIAFNASLTSQLE 251 (370)
T ss_pred ------hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccc----cchHHHHHHHHHHHHHHHHHHHH
Confidence 11122333444567999999999999999999999999999998763 23344888999999999999999
Q ss_pred HHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc-cccCccccCCCCCC-CCCCCCceeecCCCccHHHHHH
Q 043563 179 NLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA-FFNGTSGCIPYLRP-CNNTNKHYFWDGYHPTEDVYSI 256 (279)
Q Consensus 179 ~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~-~~~~~~~C~~~~~~-C~~~~~y~fwD~~HPT~~~h~~ 256 (279)
+++ .+|+.+|++.++++|+.||++|||+|++..||.. ..++ .|.+.... |..|++|+|||.+|||+++|++
T Consensus 252 ~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~l 324 (370)
T COG3240 252 QLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHPTTAVHHL 324 (370)
T ss_pred Hhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCCchHHHHH
Confidence 874 7899999999999999999999999999999975 3333 67765554 4557789999999999999999
Q ss_pred HHHHHhcC
Q 043563 257 LASGCINN 264 (279)
Q Consensus 257 ia~~~~~~ 264 (279)
||+++++.
T Consensus 325 iAeyila~ 332 (370)
T COG3240 325 IAEYILAR 332 (370)
T ss_pred HHHHHHHH
Confidence 99999986
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.90 E-value=4.1e-23 Score=176.44 Aligned_cols=186 Identities=32% Similarity=0.470 Sum_probs=135.3
Q ss_pred CCcceecccccccCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhcccc
Q 043563 21 LTGLNYASGSCGILPETGSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSLY 100 (279)
Q Consensus 21 ~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~ 100 (279)
..+.|+|.+|+++.............+..|+...... ....+.+|++||+|+||++. .
T Consensus 41 ~~~~n~a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~lv~i~~G~ND~~~--~----- 98 (234)
T PF00657_consen 41 VDVSNYAISGATSDGDLYNLWAQVQNISQQISRLLDS---------------KSFYDPDLVVIWIGTNDYFN--N----- 98 (234)
T ss_dssp EEEEEEE-TT--CC-HGGCCCCTCHHHHHHHHHHHHH---------------HHHHTTSEEEEE-SHHHHSS--C-----
T ss_pred CCeeccccCCCccccccchhhHHHHHHHHHhhccccc---------------cccCCcceEEEecccCcchh--h-----
Confidence 5678999999997543310000111123333322211 12347789999999999864 1
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHcCCc-----EEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHH
Q 043563 101 DTSKRYTPQQFAQLLVYKLSQQLERLYNLGAR-----KIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPA 175 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar-----~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~ 175 (279)
.........++.+++.+.+.+++|++.|+| +++++++||++|.|...........|.+.++..+..||++|++
T Consensus 99 --~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~ 176 (234)
T PF00657_consen 99 --RDSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALRE 176 (234)
T ss_dssp --CSCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHH
T ss_pred --cccchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHH
Confidence 012234567888999999999999999999 9999999999998887665433467999999999999999999
Q ss_pred HHHHHHhhCC-CCeEEEEecchHHHHH--HhCCCCCCCccCCCCcccccccCccccCCCCCCCCCCCCceeecCCCccHH
Q 043563 176 MLQNLTTSLK-GSNFINGHGHGVGYDA--IINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCNNTNKHYFWDGYHPTED 252 (279)
Q Consensus 176 ~l~~l~~~~~-~~~i~~~D~~~~~~~i--~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~~~~y~fwD~~HPT~~ 252 (279)
.+.++++.++ +.++.++|+++.+.++ +.+|.. ++|+|||++|||++
T Consensus 177 ~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~-------------------------------~~~~~~D~~Hpt~~ 225 (234)
T PF00657_consen 177 VAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN-------------------------------DKYMFWDGVHPTEK 225 (234)
T ss_dssp HHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH-------------------------------HHCBBSSSSSB-HH
T ss_pred HhhhcccccccCCceEEEEHHHHHHHhhhccCccc-------------------------------ceeccCCCcCCCHH
Confidence 9999988775 8899999999999997 566532 46999999999999
Q ss_pred HHHHHHHHH
Q 043563 253 VYSILASGC 261 (279)
Q Consensus 253 ~h~~ia~~~ 261 (279)
+|++||+++
T Consensus 226 g~~~iA~~i 234 (234)
T PF00657_consen 226 GHKIIAEYI 234 (234)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHcCC
Confidence 999999975
No 8
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=99.13 E-value=1.1e-09 Score=97.48 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=105.2
Q ss_pred CcceecccccccCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhccccC
Q 043563 22 TGLNYASGSCGILPETGSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSLYD 101 (279)
Q Consensus 22 ~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 101 (279)
.+.|.|+.|+++ .+|..|++...+..++ .........-.|++|+||+||+.. +....
T Consensus 83 ~~~N~av~Ga~s-----------~dL~~qa~~lv~r~~~--------~~~i~~~~dwklVtI~IG~ND~c~-~~~~~--- 139 (288)
T cd01824 83 SGFNVAEPGAKS-----------EDLPQQARLLVRRMKK--------DPRVDFKNDWKLITIFIGGNDLCS-LCEDA--- 139 (288)
T ss_pred cceeecccCcch-----------hhHHHHHHHHHHHHhh--------ccccccccCCcEEEEEecchhHhh-hcccc---
Confidence 355666666664 3677888765443321 000011113458999999999974 21111
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHcCCc-EEEEeccCCcccccccccccC-----CCCCCh----------hhhhHH
Q 043563 102 TSKRYTPQQFAQLLVYKLSQQLERLYNLGAR-KIVVFELGPIGCLPWITRNNK-----HTGQCV----------EDTNQI 165 (279)
Q Consensus 102 ~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar-~~~v~~lpplg~~P~~~~~~~-----~~~~~~----------~~~~~~ 165 (279)
.. .......+++.+.++.|.+...| .++++++|++..++....... ....|. +.+.++
T Consensus 140 --~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~ 213 (288)
T cd01824 140 --NP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKF 213 (288)
T ss_pred --cC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHH
Confidence 11 12345667788888888887755 467777887765544321000 012232 356677
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCCCCCCceeec
Q 043563 166 VSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCNNTNKHYFWD 245 (279)
Q Consensus 166 ~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~~~~y~fwD 245 (279)
...|++.+++.++.-+-+..+..+++ ..++.+.+..+..-| .+ .+++-||
T Consensus 214 ~~~y~~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~~~~~g--------------------------~d-~~~~~~D 263 (288)
T cd01824 214 YKEYQNEVEEIVESGEFDREDFAVVV---QPFFEDTSLPPLPDG--------------------------PD-LSFFSPD 263 (288)
T ss_pred HHHHHHHHHHHHhcccccccCccEEe---eCchhccccccccCC--------------------------Cc-chhcCCC
Confidence 88888888776665322223444544 233333221110001 01 2577899
Q ss_pred CCCccHHHHHHHHHHHhcC
Q 043563 246 GYHPTEDVYSILASGCINN 264 (279)
Q Consensus 246 ~~HPT~~~h~~ia~~~~~~ 264 (279)
++||++++|.++|+.++..
T Consensus 264 ~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 264 CFHFSQRGHAIAANALWNN 282 (288)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999875
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.10 E-value=7e-10 Score=92.43 Aligned_cols=121 Identities=18% Similarity=0.249 Sum_probs=81.6
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHH-cCCcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYN-LGARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~-~Gar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
.-++++|.+|+||+... .+ .++..+++.+.++++.+ ....+|++.++||++..|....
T Consensus 67 ~pd~Vii~~G~ND~~~~------------~~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL------------TS----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----- 125 (191)
T ss_pred CCCEEEEEecccCcCCC------------CC----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----
Confidence 55799999999998521 11 24566777777777776 3456799999999876653311
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
......++....+|+.+++..++ + .++.++|++..+.
T Consensus 126 -~~~~~~~~~~~~~n~~~~~~a~~----~--~~~~~id~~~~~~------------------------------------ 162 (191)
T cd01836 126 -PLRWLLGRRARLLNRALERLASE----A--PRVTLLPATGPLF------------------------------------ 162 (191)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhc----C--CCeEEEecCCccc------------------------------------
Confidence 11233455566777776665543 2 2577888876542
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
..++..|++||+++||+++|+.+.+.
T Consensus 163 ---~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ---PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ---hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 12345799999999999999998763
No 10
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.06 E-value=3.6e-09 Score=87.63 Aligned_cols=130 Identities=15% Similarity=0.075 Sum_probs=85.8
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHH-HcCCcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLY-NLGARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~-~~Gar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
.-++++|++|+||+...+. .... .++..+++...|+.+. .....+|++.+.+|....+..
T Consensus 61 ~~d~v~l~~G~ND~~~~~~--------~~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~------- 121 (191)
T cd01834 61 KPDVVSIMFGINDSFRGFD--------DPVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP------- 121 (191)
T ss_pred CCCEEEEEeecchHhhccc--------cccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC-------
Confidence 3479999999999974221 0112 3455677777778775 334456777776554322110
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
..-....+.....||+.|++..++ .++.++|++..+.+....+
T Consensus 122 ~~~~~~~~~~~~~~n~~l~~~a~~-------~~~~~iD~~~~~~~~~~~~------------------------------ 164 (191)
T cd01834 122 LPDGAEYNANLAAYADAVRELAAE-------NGVAFVDLFTPMKEAFQKA------------------------------ 164 (191)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHH-------cCCeEEecHHHHHHHHHhC------------------------------
Confidence 001245667778888888776543 2489999999987644331
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
+..++++|++||+++||++||+.+.++
T Consensus 165 --~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 --GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred --CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 134678999999999999999998763
No 11
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.03 E-value=5.4e-09 Score=85.77 Aligned_cols=121 Identities=18% Similarity=0.159 Sum_probs=82.4
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CCcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNL-GARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
+-++++|++|+||..... + .+...+++...++++.+. ...+++++++||....+.
T Consensus 51 ~pd~v~i~~G~ND~~~~~------------~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKEV------------S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------- 106 (174)
T ss_pred CCCEEEEEeccccCCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------
Confidence 457889999999985211 2 244567777788888765 356788999888643221
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
+....+.....||+.+++..++. ++.++|++..+.+ .. |
T Consensus 107 --~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~----~~--~-------------------------- 145 (174)
T cd01841 107 --IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVD----EF--G-------------------------- 145 (174)
T ss_pred --cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcC----CC--C--------------------------
Confidence 12234566788998888765532 3889999987642 10 0
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
+....+..|++||+++||++||+.+.+
T Consensus 146 -~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 -NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred -CccccccCCCcccCHHHHHHHHHHHHh
Confidence 011245689999999999999998864
No 12
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.03 E-value=2.8e-09 Score=90.18 Aligned_cols=120 Identities=16% Similarity=0.138 Sum_probs=77.3
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHc------CCcEEEEeccCCccccccccc
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNL------GARKIVVFELGPIGCLPWITR 150 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~------Gar~~~v~~lpplg~~P~~~~ 150 (279)
..++++|++|+||+...+. .++ +...+++.+.++.+.+. +..++++++.||+...+...
T Consensus 79 ~pd~vii~lGtND~~~~~~----------~~~----~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~- 143 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYFN----------LSA----AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL- 143 (208)
T ss_pred CCCEEEEeccccccccccC----------CCH----HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-
Confidence 5589999999999863211 122 33455566666666654 45678888888872211110
Q ss_pred ccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCC
Q 043563 151 NNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIP 230 (279)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~ 230 (279)
..+....+.....||+.+++..++. ++.++|.+.++..
T Consensus 144 -----~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~------------------------------ 181 (208)
T cd01839 144 -----AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST------------------------------ 181 (208)
T ss_pred -----hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc------------------------------
Confidence 1233345667778888877766542 3777887553310
Q ss_pred CCCCCCCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 231 YLRPCNNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 231 ~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
...|++|||++||++||+.++..
T Consensus 182 -----------~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 -----------SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred -----------CCCCccCcCHHHHHHHHHHHHHH
Confidence 24799999999999999998764
No 13
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.00 E-value=4e-09 Score=85.08 Aligned_cols=116 Identities=21% Similarity=0.324 Sum_probs=83.2
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCc-EEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGAR-KIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar-~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
+-++++|.+|+||+.... + .+...+++...|+++.+.+.+ +|++.++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~~------------~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLNR------------D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccCC------------C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 558999999999986321 1 234567777778888776432 36666666542211
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
.+.....||+.+++.+++.... +..+.++|++..+..
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------- 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------- 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC-----------------------------------
Confidence 1567889999999999887553 567999998875521
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
+++.+|++||+++||+.||+.+++.
T Consensus 132 ----~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ----ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred ----cccccCCCCCchHHHHHHHHHHHhh
Confidence 2457999999999999999998863
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.97 E-value=7.8e-09 Score=84.44 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=79.5
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHH--cCCcEEEEeccCCcccccccccccCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYN--LGARKIVVFELGPIGCLPWITRNNKH 154 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~--~Gar~~~v~~lpplg~~P~~~~~~~~ 154 (279)
..+++++.+|.||.... .++ +...+++.+.++.+.+ .++ +++++++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~------------~~~----~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQG------------TSD----EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCC------------CCH----HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc-------
Confidence 45899999999998521 122 3456667777777776 455 58888888765 10
Q ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCC
Q 043563 155 TGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRP 234 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~ 234 (279)
....+..+..||+.+++..++ .++.++|.+..+.+ . .|
T Consensus 102 ----~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~~----~--~~------------------------- 139 (169)
T cd01828 102 ----KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFTN----A--DG------------------------- 139 (169)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhcC----C--CC-------------------------
Confidence 112345678899888876652 24778899876532 0 00
Q ss_pred CCCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 235 CNNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 235 C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
+..+++.+|++|||++||+++|+.+.+
T Consensus 140 --~~~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 140 --DLKNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred --CcchhhccCccccCHHHHHHHHHHHHH
Confidence 123466789999999999999999875
No 15
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.96 E-value=1.7e-08 Score=84.59 Aligned_cols=139 Identities=14% Similarity=0.032 Sum_probs=83.8
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
+-++++|.+|+||+......... .......+.+...+++...++.+.+.|++ +++++.||+.-
T Consensus 59 ~pd~vii~~G~ND~~~~~~~~~~----~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------ 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDIRDGDGY----LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------ 121 (200)
T ss_pred CCCEEEEEecCCCCccccCCCce----eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC------------
Confidence 45789999999998632211000 01112344556667777787877777776 77778887631
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
...+.....+|+.+++..++ ..+.++|++..+.+ + ..|+.. . ......
T Consensus 122 ---~~~~~~~~~~~~~~~~~a~~-------~~~~~id~~~~~~~----~---------~~~~~~--~-------~~~~~~ 169 (200)
T cd01829 122 ---PKLSADMVYLNSLYREEVAK-------AGGEFVDVWDGFVD----E---------NGRFTY--S-------GTDVNG 169 (200)
T ss_pred ---hhHhHHHHHHHHHHHHHHHH-------cCCEEEEhhHhhcC----C---------CCCeee--e-------ccCCCC
Confidence 12234566788777665543 23789999877632 1 123211 0 000111
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
....+...|++|||+++|+++|+.+.+.
T Consensus 170 ~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 170 KKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred cEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 2224556799999999999999998764
No 16
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.96 E-value=1.8e-08 Score=83.32 Aligned_cols=123 Identities=17% Similarity=0.209 Sum_probs=81.5
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
..++++|.+|.||..... +. .+..+++...++.+.+.|++ ++++..||....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~~------------~~----~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVNT------------SL----EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------- 114 (183)
T ss_pred CCCEEEEEeccCccccCC------------CH----HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------
Confidence 457899999999985210 12 34566677777778788886 5566666654333211
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
+....+.....||+.+++..++ .++.++|.+..+.+.-. .
T Consensus 115 -~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~--------------------------------~ 154 (183)
T cd04501 115 -QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN--------------------------------V 154 (183)
T ss_pred -hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc--------------------------------c
Confidence 1123456677888877766553 24889999987664210 0
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
.....+..|++||+++||+++|+.+.+
T Consensus 155 ~~~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 155 GLKPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHH
Confidence 112355689999999999999999875
No 17
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.94 E-value=2.4e-08 Score=81.77 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=77.0
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGA-RKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
..++++|.+|+||+.... + .+...+++.+.++++.+.+. .+++++++||. | ..
T Consensus 50 ~p~~vvi~~G~ND~~~~~------------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~----- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASGR------------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR----- 103 (171)
T ss_pred CCCEEEEEEecCcccCCC------------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc-----
Confidence 456999999999974211 1 34567778888888887653 35677776542 1 10
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
...+.....+|+.+++..++ ...+.++|++..+.+.-.+
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~~------~~~v~~vD~~~~~~~~~~~------------------------------- 142 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAET------RPNLTYIDVASPMLDADGK------------------------------- 142 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHhc------CCCeEEEECcHHHhCCCCC-------------------------------
Confidence 11233456788777666531 2358899998876531000
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
...+++..|++||+++||+++|+.+..
T Consensus 143 -~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 -PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred -cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012456789999999999999998864
No 18
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.93 E-value=3.7e-08 Score=82.91 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=83.6
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCc-EEEEeccC-CcccccccccccCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGAR-KIVVFELG-PIGCLPWITRNNKH 154 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar-~~~v~~lp-plg~~P~~~~~~~~ 154 (279)
.-++++|.+|+||+......... .........-.+....++.+.|+++.+.+.+ +|++++++ |... ..
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~-----~~--- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFL--SLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYV-----YF--- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCcccc-----cc---
Confidence 45789999999999754321100 0000011123455677788888888876543 56777653 3211 10
Q ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCC
Q 043563 155 TGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRP 234 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~ 234 (279)
.-....+..+..||+.+++..++ ..++.++|++..+..--
T Consensus 138 --~~~~~~~~~~~~~n~~~~~~a~~------~~~v~~vd~~~~~~~~~-------------------------------- 177 (204)
T cd04506 138 --PNITEINDIVNDWNEASQKLASQ------YKNAYFVPIFDLFSDGQ-------------------------------- 177 (204)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHh------CCCeEEEehHHhhcCCc--------------------------------
Confidence 11234577888999887776542 13489999988664300
Q ss_pred CCCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 235 CNNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 235 C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
...++..|++||+++||++||+.+++
T Consensus 178 ---~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 ---NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ---ccccccccCcCCCHHHHHHHHHHHHh
Confidence 12345679999999999999999875
No 19
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.93 E-value=1.4e-08 Score=81.94 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=83.5
Q ss_pred cccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHH-cCCcEEEEeccCCcccccccccccCC
Q 043563 76 LSKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYN-LGARKIVVFELGPIGCLPWITRNNKH 154 (279)
Q Consensus 76 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~-~Gar~~~v~~lpplg~~P~~~~~~~~ 154 (279)
.+.+++++.+|+||+.... ..+ .....+.+...++.+.+ ....+|++++.|+....|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------~~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------DTS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc----------ccC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------
Confidence 3678999999999996311 001 22344555556666654 4556788989888766543
Q ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCC
Q 043563 155 TGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRP 234 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~ 234 (279)
..+.....+|+.+++..++.... ..+.++|++..+...
T Consensus 123 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~--------------------------------- 160 (187)
T cd00229 123 ------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE--------------------------------- 160 (187)
T ss_pred ------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC---------------------------------
Confidence 23345677888877777655321 458888888766431
Q ss_pred CCCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 235 CNNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 235 C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
+..+++||++|||+++|+++|+.+++
T Consensus 161 ---~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ---DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ---ccccccCCCCCCchhhHHHHHHHHhc
Confidence 24578899999999999999999875
No 20
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.88 E-value=3.3e-08 Score=83.49 Aligned_cols=127 Identities=14% Similarity=0.076 Sum_probs=73.0
Q ss_pred cceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCC
Q 043563 78 KSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQ 157 (279)
Q Consensus 78 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~ 157 (279)
-++++|++|+||+........ .+...++...+++...++++.+.|++ +++.++||..-.+..
T Consensus 75 p~~vii~~G~ND~~~~~~~~~--------~~~~~~~~~~~~l~~ii~~~~~~~~~-vil~t~~P~~~~~~~--------- 136 (204)
T cd01830 75 VRTVIILEGVNDIGASGTDFA--------AAPVTAEELIAGYRQLIRRAHARGIK-VIGATITPFEGSGYY--------- 136 (204)
T ss_pred CCEEEEecccccccccccccc--------cCCCCHHHHHHHHHHHHHHHHHCCCe-EEEecCCCCCCCCCC---------
Confidence 468899999999863211100 01112345677888888888888874 777888876432211
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCCC
Q 043563 158 CVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCNN 237 (279)
Q Consensus 158 ~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~ 237 (279)
.... +..++++.+.+.+.. ... .++|+++.|.+... +. .-
T Consensus 137 -~~~~----~~~~~~~n~~~~~~~----~~~-~~vD~~~~~~~~~~-~~-----------------------------~~ 176 (204)
T cd01830 137 -TPAR----EATRQAVNEWIRTSG----AFD-AVVDFDAALRDPAD-PS-----------------------------RL 176 (204)
T ss_pred -CHHH----HHHHHHHHHHHHccC----CCC-eeeEhHHhhcCCCC-ch-----------------------------hc
Confidence 1111 223333333333221 112 35898876643100 00 00
Q ss_pred CCCceeecCCCccHHHHHHHHHHHh
Q 043563 238 TNKHYFWDGYHPTEDVYSILASGCI 262 (279)
Q Consensus 238 ~~~y~fwD~~HPT~~~h~~ia~~~~ 262 (279)
...|+.+|++||+++||++||+.+.
T Consensus 177 ~~~~~~~DGvHpn~~Gy~~~A~~i~ 201 (204)
T cd01830 177 RPAYDSGDHLHPNDAGYQAMADAVD 201 (204)
T ss_pred ccccCCCCCCCCCHHHHHHHHHhcC
Confidence 1246668999999999999999874
No 21
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.87 E-value=2.5e-08 Score=82.44 Aligned_cols=117 Identities=18% Similarity=0.219 Sum_probs=77.8
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCc-ccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPI-GCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lppl-g~~P~~~~~~~~~ 155 (279)
.-++++|++|.||... . ..++ ++..+++...|+++...+++ ++++++||. +..|.
T Consensus 67 ~~d~vii~~G~ND~~~----~-------~~~~----~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~-------- 122 (185)
T cd01832 67 RPDLVTLLAGGNDILR----P-------GTDP----DTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF-------- 122 (185)
T ss_pred CCCEEEEecccccccc----C-------CCCH----HHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh--------
Confidence 4579999999999852 0 1122 34566667777777767775 788888887 32221
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
....+.....+|+.|++..++ .++.++|++..+. +.
T Consensus 123 ---~~~~~~~~~~~n~~l~~~a~~-------~~v~~vd~~~~~~------------------~~---------------- 158 (185)
T cd01832 123 ---RRRVRARLAAYNAVIRAVAAR-------YGAVHVDLWEHPE------------------FA---------------- 158 (185)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHH-------cCCEEEecccCcc------------------cC----------------
Confidence 112344677888887776653 2488899876532 00
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
...++.-|++||+++||++||+.+++
T Consensus 159 --~~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 --DPRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred --CccccccCCCCCChhHHHHHHHHHhh
Confidence 11233469999999999999999876
No 22
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.84 E-value=4.7e-08 Score=85.40 Aligned_cols=159 Identities=11% Similarity=0.043 Sum_probs=87.5
Q ss_pred ccceEEEEecchhhhhHhhhcc-ccC----------CCCCCChHHHHHHHHHHHHHHHHHHHHc-CCcEEEEeccCCccc
Q 043563 77 SKSVFIVSIGSNDYINNYLETS-LYD----------TSKRYTPQQFAQLLVYKLSQQLERLYNL-GARKIVVFELGPIGC 144 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~-~~~----------~~~~~~~~~~~~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplg~ 144 (279)
.-++++|++|+||+........ ... ...........+...+++...|++|.+. .--+|++++.|++--
T Consensus 80 ~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 80 DTDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 3589999999999853221100 000 0000011233455667777777777754 334688999887531
Q ss_pred cccccccc--------CCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCC
Q 043563 145 LPWITRNN--------KHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNP 216 (279)
Q Consensus 145 ~P~~~~~~--------~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~ 216 (279)
.-.... ..........++....+|..+++..++ +.+.++.|+|++..|.. ...
T Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~----~~~~~v~fvD~~~~f~~-------------~~~ 220 (259)
T cd01823 160 --PDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAAD----AGDYKVRFVDTDAPFAG-------------HRA 220 (259)
T ss_pred --CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----hCCceEEEEECCCCcCC-------------Ccc
Confidence 000000 000112345666777777776665554 33356999999986643 122
Q ss_pred cccccccCccccCCCCCCCCCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 217 CCTAFFNGTSGCIPYLRPCNNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 217 Cc~~~~~~~~~C~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
|..... +. .-.+......-|++||+++||+.||+.+.+
T Consensus 221 ~~~~~~-----~~----~~~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 221 CSPDPW-----SR----SVLDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccCCCc-----cc----cccCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 322100 00 000122334679999999999999999875
No 23
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.83 E-value=5.4e-08 Score=80.75 Aligned_cols=119 Identities=17% Similarity=0.069 Sum_probs=73.0
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGA-RKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
..++++|.+|+||..... .... +....++...|+++.+.+. .++++.+.||......
T Consensus 67 ~pd~Vii~~G~ND~~~~~----------~~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~-------- 124 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN----------WKYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG-------- 124 (188)
T ss_pred CCCEEEEEcccCCCCCCC----------CccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC--------
Confidence 457999999999985211 0012 3345667777777776654 4677777766532110
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
.. ...+.....+|+.+++..++ ..+.++|.+..+.. +
T Consensus 125 -~~-~~~~~~~~~~~~~~~~~a~~-------~~~~~vD~~~~~~~---~------------------------------- 161 (188)
T cd01827 125 -GF-INDNIIKKEIQPMIDKIAKK-------LNLKLIDLHTPLKG---K------------------------------- 161 (188)
T ss_pred -Cc-cchHHHHHHHHHHHHHHHHH-------cCCcEEEccccccC---C-------------------------------
Confidence 11 11234455666666555432 24777898764421 0
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
+ .++-|++||++++|++||+.+++.
T Consensus 162 --~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 --P--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred --c--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 1 234699999999999999998763
No 24
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.80 E-value=4.3e-08 Score=83.45 Aligned_cols=120 Identities=18% Similarity=0.112 Sum_probs=78.8
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLG-ARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
.-.+++|++|+||+.... + .++..+++...++++.+.. ..++++++++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~~------------~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHTT------------T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------- 143 (214)
T ss_pred CCCEEEEEecccccCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc---------
Confidence 457899999999985211 1 2345677778888887763 2468888888764321
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
..+......+|+.+++... + ...+.++|++..+.+ .. +
T Consensus 144 ----~~~~~~~~~~n~~l~~~~~----~--~~~v~~vd~~~~~~~---~~-------------g---------------- 181 (214)
T cd01820 144 ----NPLRERNAQVNRLLAVRYD----G--LPNVTFLDIDKGFVQ---SD-------------G---------------- 181 (214)
T ss_pred ----hhHHHHHHHHHHHHHHHhc----C--CCCEEEEeCchhhcc---cC-------------C----------------
Confidence 1233455677777665442 1 236899999876642 00 0
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
...+.++.|++||+++||+++|+.+...
T Consensus 182 -~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 182 -TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred -CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0122346899999999999999998864
No 25
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.76 E-value=2.3e-07 Score=76.46 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=73.1
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGA-RKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Ga-r~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
...+++|.+|+||... . .+..+++...+++|.+.+. .+|++++.||. |.....
T Consensus 57 ~pd~vii~~G~ND~~~---------------~----~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~---- 110 (177)
T cd01844 57 PADLYIIDCGPNIVGA---------------E----AMVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELT---- 110 (177)
T ss_pred CCCEEEEEeccCCCcc---------------H----HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccC----
Confidence 4579999999999731 0 1467788888888887764 45777776664 222111
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
.......++....+| +.++++.+. .+.++.++|.++++..
T Consensus 111 ~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~v~~id~~~~~~~----------------------------------- 150 (177)
T cd01844 111 PGRGKLTLAVRRALR----EAFEKLRAD-GVPNLYYLDGEELLGP----------------------------------- 150 (177)
T ss_pred cchhHHHHHHHHHHH----HHHHHHHhc-CCCCEEEecchhhcCC-----------------------------------
Confidence 112223334444444 444444332 2347899997654311
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
+.-++.|++|||++||++||+.+..
T Consensus 151 ---~~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 ---DGEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred ---CCCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0124679999999999999998875
No 26
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.76 E-value=7.2e-08 Score=80.30 Aligned_cols=133 Identities=13% Similarity=0.138 Sum_probs=81.7
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHH--cCCcEEEEeccCCcccccccccccCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYN--LGARKIVVFELGPIGCLPWITRNNKH 154 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~--~Gar~~~v~~lpplg~~P~~~~~~~~ 154 (279)
+-++++|++|+||....... ...+ .+...+++...|+++.+ .|+ ++++++.||++......... .
T Consensus 63 ~pd~vii~~G~ND~~~~~~~-------~~~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~-~ 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQP-------QHVP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE-D 129 (199)
T ss_pred CceEEEEEecCccccCCCCC-------Cccc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc-c
Confidence 56899999999998631100 0012 23445566666666666 455 57788888765332110000 0
Q ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCC
Q 043563 155 TGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRP 234 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~ 234 (279)
........++....||+.+++..++. .+.++|+++.+.. ++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~---~~~---------------------------- 171 (199)
T cd01838 130 GGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQE---EAG---------------------------- 171 (199)
T ss_pred ccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHh---ccC----------------------------
Confidence 01123345667788888776655432 3888999887754 110
Q ss_pred CCCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 235 CNNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 235 C~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
....++.|++||+++||+++|+.+.+
T Consensus 172 ---~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 172 ---WLESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred ---chhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 11245679999999999999999875
No 27
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.75 E-value=8.1e-08 Score=80.39 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=69.1
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEe-ccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVF-ELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~-~lpplg~~P~~~~~~~~~ 155 (279)
+.++++|.+|+||.... .+ .+...+++...++++.+.|++.+++. .+|+ ..
T Consensus 71 ~pd~Vii~~GtND~~~~------------~~----~~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~------- 122 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG------------FP----PQQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NY------- 122 (191)
T ss_pred CCCEEEEEeccCcCccC------------CC----HHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----cc-------
Confidence 45799999999997421 12 24556777788888888898876653 2222 11
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
...+++.+.+.++++.+++ ++.++|.+.....
T Consensus 123 ----------~~~~~~~~~~~~~~~a~~~---~v~~id~~~~~~~----------------------------------- 154 (191)
T PRK10528 123 ----------GRRYNEAFSAIYPKLAKEF---DIPLLPFFMEEVY----------------------------------- 154 (191)
T ss_pred ----------cHHHHHHHHHHHHHHHHHh---CCCccHHHHHhhc-----------------------------------
Confidence 0123334445555565555 2556675421100
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
...+++..|++||+++||+++|+.+.+.
T Consensus 155 -~~~~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 155 -LKPQWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred -cCHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0123566799999999999999999875
No 28
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.74 E-value=6.2e-08 Score=78.42 Aligned_cols=119 Identities=18% Similarity=0.240 Sum_probs=79.2
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
.-++++|.+|+||.... . ......+...+++...++.+...+ +++++.+||..-.+..
T Consensus 61 ~~d~vvi~~G~ND~~~~--~----------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~-------- 118 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG--D----------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRD-------- 118 (179)
T ss_dssp TCSEEEEE--HHHHCTC--T----------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTT--------
T ss_pred CCCEEEEEccccccccc--c----------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccc--------
Confidence 45699999999999641 0 122345677888888888888778 8888888876533221
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
.+..........+|+.+++..++ + .+.++|+...+.+ +. .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~----~~-----------------------------~ 158 (179)
T PF13472_consen 119 PKQDYLNRRIDRYNQAIRELAKK----Y---GVPFIDLFDAFDD----HD-----------------------------G 158 (179)
T ss_dssp THTTCHHHHHHHHHHHHHHHHHH----C---TEEEEEHHHHHBT----TT-----------------------------S
T ss_pred ccchhhhhhHHHHHHHHHHHHHH----c---CCEEEECHHHHcc----cc-----------------------------c
Confidence 11234566778888887775543 2 5889999987542 10 0
Q ss_pred CCCCceeecCCCccHHHHHHH
Q 043563 237 NTNKHYFWDGYHPTEDVYSIL 257 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~i 257 (279)
....+++.|++|||++||++|
T Consensus 159 ~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 159 WFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp CBHTCTBTTSSSBBHHHHHHH
T ss_pred cchhhcCCCCCCcCHHHhCcC
Confidence 123467899999999999986
No 29
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.68 E-value=3.3e-07 Score=76.46 Aligned_cols=123 Identities=16% Similarity=0.188 Sum_probs=72.5
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
+.++++|.+|+||....... ....+.+++ .+.+...++++ +.++ +++++++||+....
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~------~~~~~~~~~----~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRK------RPQLSARAF----LFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccCc------ccccCHHHH----HHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 55899999999999642100 011122222 23333333333 2344 47788877764211
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
....+.....+|+.+++..++ ..+.++|++..+.+. +.
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~-------~~~~~vd~~~~~~~~---~~------------------------------ 164 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLR-------RDVPFLDTFTPLLNH---PQ------------------------------ 164 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHH-------cCCCeEeCccchhcC---cH------------------------------
Confidence 112345677788877776543 247889998876541 10
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
....++..|++||+++||++||+.+.+
T Consensus 165 ~~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 165 WRRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred HHHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 011233469999999999999998864
No 30
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.65 E-value=4.3e-07 Score=74.32 Aligned_cols=112 Identities=17% Similarity=0.180 Sum_probs=67.1
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
+.++++|.+|+||.... .++ +...+++...++++.+.|++ ++++++|. |...
T Consensus 64 ~pd~v~i~~G~ND~~~~------------~~~----~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~------- 115 (177)
T cd01822 64 KPDLVILELGGNDGLRG------------IPP----DQTRANLRQMIETAQARGAP-VLLVGMQA----PPNY------- 115 (177)
T ss_pred CCCEEEEeccCcccccC------------CCH----HHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCcc-------
Confidence 44799999999997521 122 34566777788888888876 55555431 1110
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
. ......||+.+++.. +++ .+.++|.+ +..+..
T Consensus 116 ~-----~~~~~~~~~~~~~~a----~~~---~~~~~d~~--~~~~~~--------------------------------- 148 (177)
T cd01822 116 G-----PRYTRRFAAIYPELA----EEY---GVPLVPFF--LEGVAG--------------------------------- 148 (177)
T ss_pred c-----hHHHHHHHHHHHHHH----HHc---CCcEechH--Hhhhhh---------------------------------
Confidence 0 012355666655544 333 25566653 111111
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
+ .+++.-|++||+++||++||+.+.+.
T Consensus 149 ~-~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 149 D-PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred C-hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 1 13456799999999999999998753
No 31
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.59 E-value=2e-07 Score=78.17 Aligned_cols=131 Identities=8% Similarity=-0.055 Sum_probs=81.8
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
+.++++|.+|+||...... ....+ ++...+++.+.++++.+.|++ +++++.||... +.
T Consensus 65 ~pdlVii~~G~ND~~~~~~-------~~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~~------- 122 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDP-------EYTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---FD------- 122 (198)
T ss_pred CCCEEEEECCCCCCCCCCC-------CCCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---cC-------
Confidence 4589999999999853110 00111 345677788888888888986 45555444211 11
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
.+. ..+.....||+.+++..++. .+.++|++..+.+..+.-..- ..
T Consensus 123 ~~~-~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~---~~----------------------- 168 (198)
T cd01821 123 EGG-KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPE---KS----------------------- 168 (198)
T ss_pred CCC-cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChH---hH-----------------------
Confidence 010 23334567787777666543 488899999988765431100 00
Q ss_pred CCC-CceeecCCCccHHHHHHHHHHHhc
Q 043563 237 NTN-KHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 237 ~~~-~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
... .++..|++||+++||++||+.+++
T Consensus 169 ~~~~~~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 169 KKYFPEGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred HhhCcCCCCCCCCCCHHHHHHHHHHHHh
Confidence 000 245689999999999999999875
No 32
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.57 E-value=6.5e-07 Score=79.12 Aligned_cols=149 Identities=16% Similarity=0.087 Sum_probs=85.1
Q ss_pred cceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCc--EEEEeccCCcccc---------c
Q 043563 78 KSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGAR--KIVVFELGPIGCL---------P 146 (279)
Q Consensus 78 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar--~~~v~~lpplg~~---------P 146 (279)
..+++|++|+||.....-. .....+ +++.-+++.+.|+.|.+...+ ++++.++|++..+ |
T Consensus 123 P~lVtI~lGgND~C~g~~d-----~~~~tp----~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hp 193 (305)
T cd01826 123 PALVIYSMIGNDVCNGPND-----TINHTT----PEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHP 193 (305)
T ss_pred CeEEEEEeccchhhcCCCc-----cccCcC----HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhcccccc
Confidence 3788999999999742100 011122 345567788888999888754 8999999984222 1
Q ss_pred ccc--------cccCC-----CCCChhh------hhHHHHHHHHHHHHHHHHHHhh--CCCCeEEEEecchHHHHHHhCC
Q 043563 147 WIT--------RNNKH-----TGQCVED------TNQIVSYFNNMLPAMLQNLTTS--LKGSNFINGHGHGVGYDAIINP 205 (279)
Q Consensus 147 ~~~--------~~~~~-----~~~~~~~------~~~~~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~i~~nP 205 (279)
... ..+.- -..|... ...++..+=++|..+..++.++ +....+.+.|+. +..++...
T Consensus 194 lg~~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~ 271 (305)
T cd01826 194 IGQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMW 271 (305)
T ss_pred chhcccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHH
Confidence 000 00000 1234322 2233444444444444444432 345677777763 44444433
Q ss_pred CCCCCccCCCCcccccccCccccCCCCCCCCCCCCcee-ecCCCccHHHHHHHHHHHhc
Q 043563 206 SKYGIADASNPCCTAFFNGTSGCIPYLRPCNNTNKHYF-WDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 206 ~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~~~~y~f-wD~~HPT~~~h~~ia~~~~~ 263 (279)
.+.|- .+-+++. .|++||++.||.++|+.++.
T Consensus 272 ~~~g~--------------------------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 272 IAFGG--------------------------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred HhcCC--------------------------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 32221 2335566 79999999999999999875
No 33
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.45 E-value=5.6e-07 Score=74.46 Aligned_cols=128 Identities=13% Similarity=-0.082 Sum_probs=78.0
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHc-CCcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNL-GARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~-Gar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
+-++++|.+|+||..... .+ .+...+++...++++.+. ...++++++.||....+..
T Consensus 56 ~pd~Vii~~G~ND~~~~~-----------~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~------- 113 (189)
T cd01825 56 PPDLVILSYGTNEAFNKQ-----------LN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA------- 113 (189)
T ss_pred CCCEEEEECCCcccccCC-----------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC-------
Confidence 347899999999974210 11 234567777777777774 4456888887765332210
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
+....+.....+|..+++..+ ++ .+.++|.++.+.+. | +. ..
T Consensus 114 --~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~~---------------~-~~-------------~~ 155 (189)
T cd01825 114 --GRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGGE---------------G-GI-------------WQ 155 (189)
T ss_pred --CCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCCc---------------c-hh-------------hH
Confidence 111122335666666555543 32 38889998876321 1 10 00
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
.....++..|++|||++||+.||+.+.+.
T Consensus 156 ~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 156 WAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred hhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 01123566899999999999999998864
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.43 E-value=2.8e-06 Score=68.26 Aligned_cols=23 Identities=22% Similarity=0.353 Sum_probs=20.3
Q ss_pred ceeecCCCccHHHHHHHHHHHhc
Q 043563 241 HYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 241 y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
++..|++||+++||+++|+.+.+
T Consensus 126 ~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 126 WFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hhcCCCCCCChhhHHHHHHHHHH
Confidence 55679999999999999999875
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.32 E-value=4.9e-06 Score=67.96 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=65.3
Q ss_pred cceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCc-EEEEeccCCcccccccccccCCCC
Q 043563 78 KSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGAR-KIVVFELGPIGCLPWITRNNKHTG 156 (279)
Q Consensus 78 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar-~~~v~~lpplg~~P~~~~~~~~~~ 156 (279)
-.+++|.+|+||+.... ..+ ......++...++++.+.... +|++...|.. ..+
T Consensus 56 pd~vii~~G~ND~~~~~----------~~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~~~~~-~~~---------- 110 (169)
T cd01831 56 PDLVVINLGTNDFSTGN----------NPP----GEDFTNAYVEFIEELRKRYPDAPIVLMLGPML-FGP---------- 110 (169)
T ss_pred CCEEEEECCcCCCCCCC----------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEecCcc-ccc----------
Confidence 57999999999985211 011 245667778888888876543 4555543322 100
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
.. .+ .+++.+++.+++ +...++.++|.+..+.
T Consensus 111 --~~-~~----~~~~~~~~~~~~----~~~~~v~~id~~~~~~------------------------------------- 142 (169)
T cd01831 111 --YG-TE----EEIKRVAEAFKD----QKSKKVHYFDTPGILQ------------------------------------- 142 (169)
T ss_pred --cc-cH----HHHHHHHHHHHh----cCCceEEEEecccccC-------------------------------------
Confidence 00 02 222333333333 2235688899754211
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
++ .+.|++||++++|++||+.+++
T Consensus 143 -~~--~~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 143 -HN--DIGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred -CC--CcCCCCCCCHHHHHHHHHHHHH
Confidence 11 3689999999999999999875
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.18 E-value=8.2e-06 Score=68.12 Aligned_cols=139 Identities=15% Similarity=0.144 Sum_probs=89.3
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLG-ARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
..++++|++|+||-.. ....+ ....... ++-++++.+.++-|...- -.+|++++-||+...-..+......
T Consensus 68 ~p~lvtVffGaNDs~l--~~~~~--~~~hvPl----~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~~ 139 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCL--PEPSS--LGQHVPL----EEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEPY 139 (245)
T ss_pred CceEEEEEecCccccC--CCCCC--CCCccCH----HHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccch
Confidence 4589999999999752 11110 0111223 344556666666665544 3457888878876553333221101
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
..-..+.|+.+..|++.+.+..+++ ++..+|..+.+++.-
T Consensus 140 ~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~--------------------------------- 179 (245)
T KOG3035|consen 140 VLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD--------------------------------- 179 (245)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc---------------------------------
Confidence 1123358999999999988877754 477788877776510
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
|-.+-.|||++|.|..|++++.++++..
T Consensus 180 -dw~~~~ltDGLHlS~~G~~ivf~Ei~kv 207 (245)
T KOG3035|consen 180 -DWQTSCLTDGLHLSPKGNKIVFDEILKV 207 (245)
T ss_pred -cHHHHHhccceeeccccchhhHHHHHHH
Confidence 1223458999999999999999999986
No 37
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=97.57 E-value=0.0014 Score=59.79 Aligned_cols=80 Identities=20% Similarity=0.160 Sum_probs=49.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHH
Q 043563 44 CLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQL 123 (279)
Q Consensus 44 ~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 123 (279)
.-+|..|-+...+..++ ..+ ..-...--|+.||||+||+-. +-..+ .++...+++-.++|.+++
T Consensus 159 s~Dlp~QAr~Lv~rik~---~~~-----i~~~~dWKLi~IfIG~ND~c~-~c~~~-------~~~~~~~~~~~~~i~~Al 222 (397)
T KOG3670|consen 159 SEDLPDQARDLVSRIKK---DKE-----INMKNDWKLITIFIGTNDLCA-YCEGP-------ETPPSPVDQHKRNIRKAL 222 (397)
T ss_pred chhhHHHHHHHHHHHHh---ccC-----cccccceEEEEEEeccchhhh-hccCC-------CCCCCchhHHHHHHHHHH
Confidence 34778888766554433 222 111123469999999999974 43221 112233455567889999
Q ss_pred HHHHHcCCcEEEEecc
Q 043563 124 ERLYNLGARKIVVFEL 139 (279)
Q Consensus 124 ~~L~~~Gar~~~v~~l 139 (279)
+.|.+.=-|.+|++-.
T Consensus 223 ~~L~~nvPR~iV~lvg 238 (397)
T KOG3670|consen 223 EILRDNVPRTIVSLVG 238 (397)
T ss_pred HHHHhcCCceEEEEec
Confidence 9999998888765443
No 38
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0016 Score=54.98 Aligned_cols=24 Identities=29% Similarity=0.347 Sum_probs=21.2
Q ss_pred ceeecCCCccHHHHHHHHHHHhcC
Q 043563 241 HYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 241 y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
+..+|++||+.++|+.+|+.+.+.
T Consensus 184 ~~~~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 184 LLTEDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred cccCCCCCcCHhhHHHHHHHHHHH
Confidence 344999999999999999999876
No 39
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.97 E-value=0.0046 Score=50.93 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=51.2
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcC-CcEEEEeccCCcccccccccccCCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLG-ARKIVVFELGPIGCLPWITRNNKHT 155 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G-ar~~~v~~lpplg~~P~~~~~~~~~ 155 (279)
+.++|++-.|.| .. + +.+..++...|++|.+.- -.-|+++...+- ..
T Consensus 59 ~a~~~~ld~~~N------~~-----------~----~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~--~~--------- 106 (178)
T PF14606_consen 59 DADLIVLDCGPN------MS-----------P----EEFRERLDGFVKTIREAHPDTPILLVSPIPY--PA--------- 106 (178)
T ss_dssp --SEEEEEESHH------CC-----------T----TTHHHHHHHHHHHHHTT-SSS-EEEEE------TT---------
T ss_pred CCCEEEEEeecC------CC-----------H----HHHHHHHHHHHHHHHHhCCCCCEEEEecCCc--cc---------
Confidence 448999999999 11 1 124556667777777654 456666553221 11
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCC
Q 043563 156 GQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPC 235 (279)
Q Consensus 156 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C 235 (279)
.............+|+.+++.+++++++ .+-++.|+|-..++-+
T Consensus 107 ~~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~----------------------------------- 150 (178)
T PF14606_consen 107 GYFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD----------------------------------- 150 (178)
T ss_dssp TTS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-------------------------------------
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc-----------------------------------
Confidence 1122233456789999999999999764 4678999988765422
Q ss_pred CCCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 236 NNTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 236 ~~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
+.-..-|++|||+.||..+|+.+..
T Consensus 151 ---d~e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 151 ---DHEATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp ----------------------------
T ss_pred ---ccccccccccccccccccccccccc
Confidence 1123689999999999999998754
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.65 E-value=0.021 Score=50.80 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=80.5
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcC---CcEEEEeccCCcccccccccccC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLG---ARKIVVFELGPIGCLPWITRNNK 153 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~G---ar~~~v~~lpplg~~P~~~~~~~ 153 (279)
+-+.++|.+|.||.......... ..... +.-.+.+.+-++++.+.- --+++.+++|+.-
T Consensus 177 ~~a~vVV~lGaND~q~~~~gd~~----~kf~S----~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r---------- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQDFKVGDVY----EKFRS----DEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR---------- 238 (354)
T ss_pred CccEEEEEecCCCHHhcccCCee----eecCc----hHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------
Confidence 45778899999999753322111 11111 234455555556555432 2367888988752
Q ss_pred CCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhC-CCCCCCccCCCCcccccccCccccCCCC
Q 043563 154 HTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIIN-PSKYGIADASNPCCTAFFNGTSGCIPYL 232 (279)
Q Consensus 154 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n-P~~yGf~~~~~~Cc~~~~~~~~~C~~~~ 232 (279)
.+.+|+-...+|...++.++++. | ++ +|+++.|-+.-.+ -..+|++ .|+
T Consensus 239 -----~~~l~~dm~~ln~iy~~~vE~~~----g-k~--i~i~d~~v~e~G~~f~~~~~D----------~NG-------- 288 (354)
T COG2845 239 -----KKKLNADMVYLNKIYSKAVEKLG----G-KF--IDIWDGFVDEGGKDFVTTGVD----------ING-------- 288 (354)
T ss_pred -----ccccchHHHHHHHHHHHHHHHhC----C-eE--EEecccccccCCceeEEeccc----------cCC--------
Confidence 34577788999999998888764 2 22 4554433321111 1111111 121
Q ss_pred CCCCCCCCceeecCCCccHHHHHHHHHHHhcC
Q 043563 233 RPCNNTNKHYFWDGYHPTEDVYSILASGCINN 264 (279)
Q Consensus 233 ~~C~~~~~y~fwD~~HPT~~~h~~ia~~~~~~ 264 (279)
.+-.+--=|++|.|.+|-+.+|.++..-
T Consensus 289 ----q~vrlR~~DGIh~T~~Gkrkla~~~~k~ 316 (354)
T COG2845 289 ----QPVRLRAKDGIHFTKEGKRKLAFYLEKP 316 (354)
T ss_pred ----ceEEEeccCCceechhhHHHHHHHHHHH
Confidence 2334556799999999999999998754
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.66 E-value=0.53 Score=38.75 Aligned_cols=127 Identities=13% Similarity=0.007 Sum_probs=69.1
Q ss_pred ceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcc--cccccccccCCCC
Q 043563 79 SVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIG--CLPWITRNNKHTG 156 (279)
Q Consensus 79 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg--~~P~~~~~~~~~~ 156 (279)
++++|..|-.|+- ++.. . ..++|-.. ++.+...+++++..++. ++..+.+|++ +...+.... -.
T Consensus 52 DVIi~Ns~LWDl~--ry~~-------~-~~~~Y~~N-L~~Lf~rLk~~lp~~al-lIW~tt~Pv~~~~~ggfl~~~--~~ 117 (183)
T cd01842 52 DLVIMNSCLWDLS--RYQR-------N-SMKTYREN-LERLFSKLDSVLPIECL-IVWNTAMPVAEEIKGGFLLPE--LH 117 (183)
T ss_pred eEEEEecceeccc--ccCC-------C-CHHHHHHH-HHHHHHHHHhhCCCccE-EEEecCCCCCcCCcCceeccc--cc
Confidence 6778888888874 2211 1 23333222 23333334444456665 4555555553 111111110 01
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCcccccccCccccCCCCCCCC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFNGTSGCIPYLRPCN 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~ 236 (279)
.+...+..-+..+|..=+..++ ++ .|.+.|.|..|..-.
T Consensus 118 ~~~~~lr~dv~eaN~~A~~va~----~~---~~dVlDLh~~fr~~~---------------------------------- 156 (183)
T cd01842 118 DLSKSLRYDVLEGNFYSATLAK----CY---GFDVLDLHYHFRHAM---------------------------------- 156 (183)
T ss_pred cccccchhHHHHHHHHHHHHHH----Hc---CceeeehHHHHHhHH----------------------------------
Confidence 2333344557788855443332 22 477889988873211
Q ss_pred CCCCceeecCCCccHHHHHHHHHHHhc
Q 043563 237 NTNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 237 ~~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
.+--.|++|.++.+|+.+++.++.
T Consensus 157 ---~~~~~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 157 ---QHRVRDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred ---hhcCCCCcCcCHHHHHHHHHHHHH
Confidence 123379999999999999998864
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=87.46 E-value=4.1 Score=35.61 Aligned_cols=141 Identities=13% Similarity=0.195 Sum_probs=83.2
Q ss_pred hcccceEEEEecchhhhhHhhhccccC-----CCCCCChHH------HHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcc
Q 043563 75 YLSKSVFIVSIGSNDYINNYLETSLYD-----TSKRYTPQQ------FAQLLVYKLSQQLERLYNLGARKIVVFELGPIG 143 (279)
Q Consensus 75 ~~~~sL~~i~iG~ND~~~~~~~~~~~~-----~~~~~~~~~------~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg 143 (279)
..+-++++|-.|..-.+..-..+.... .....+... -++++++.+...++.|.+...+-=+|+++.|+-
T Consensus 99 l~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPVr 178 (251)
T PF08885_consen 99 LEEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPVR 178 (251)
T ss_pred HHhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccch
Confidence 335678899999988753111000000 111122222 256778888888888888777545678888863
Q ss_pred cccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCCCCccccccc
Q 043563 144 CLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADASNPCCTAFFN 223 (279)
Q Consensus 144 ~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~ 223 (279)
...+.. ..-.-..|..++ +.|+..+.+|.+.++ ++.||=.|.++.+-+.++.
T Consensus 179 ---l~~T~~---~~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyr----------------- 230 (251)
T PF08885_consen 179 ---LIATFR---DRDGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYR----------------- 230 (251)
T ss_pred ---hhcccc---cccchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCcccccc-----------------
Confidence 333211 111223344444 467788888887654 6788888887765333221
Q ss_pred CccccCCCCCCCCCCCCceeecCCCccHHHHHHHHHH
Q 043563 224 GTSGCIPYLRPCNNTNKHYFWDGYHPTEDVYSILASG 260 (279)
Q Consensus 224 ~~~~C~~~~~~C~~~~~y~fwD~~HPT~~~h~~ia~~ 260 (279)
|.==|-.||++.+-..|-+.
T Consensus 231 -----------------fy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 231 -----------------FYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred -----------------cccccCCCCCHHHHHHHHhh
Confidence 22247899999998877654
No 43
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=78.69 E-value=13 Score=31.87 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=49.0
Q ss_pred EEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhh
Q 043563 82 IVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVED 161 (279)
Q Consensus 82 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~ 161 (279)
.|+.|.+.....|-.. -...++ .+..-+.+.++.|...|.|+|+++|=- ++..
T Consensus 61 ~i~yG~s~~h~~fpGT------isl~~~----t~~~~l~di~~sl~~~Gf~~ivivngH---------------gGN~-- 113 (237)
T PF02633_consen 61 PIPYGCSPHHMGFPGT------ISLSPE----TLIALLRDILRSLARHGFRRIVIVNGH---------------GGNI-- 113 (237)
T ss_dssp -B--BB-GCCTTSTT-------BBB-HH----HHHHHHHHHHHHHHHHT--EEEEEESS---------------TTHH--
T ss_pred CCccccCcccCCCCCe------EEeCHH----HHHHHHHHHHHHHHHcCCCEEEEEECC---------------HhHH--
Confidence 3578888876543210 112232 344456677888999999999998831 1111
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHH
Q 043563 162 TNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDA 201 (279)
Q Consensus 162 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 201 (279)
..|...++++++++++..+.++|.+.+....
T Consensus 114 ---------~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 114 ---------AALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp ---------HHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred ---------HHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 2456667777777789999999999887654
No 44
>PLN02757 sirohydrochlorine ferrochelatase
Probab=78.07 E-value=7.7 Score=31.21 Aligned_cols=64 Identities=16% Similarity=0.344 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec---c
Q 043563 119 LSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG---H 195 (279)
Q Consensus 119 ~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~---~ 195 (279)
+.+.|++|.+.|+|+|+| .|.++... .....-+.+.++++++++|+.+|.+... +
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G--------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~ 117 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPG--------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGLH 117 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCC--------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCCC
Confidence 344567788889999988 46666532 1113446778888999999999887643 4
Q ss_pred hHHHHHHhC
Q 043563 196 GVGYDAIIN 204 (279)
Q Consensus 196 ~~~~~i~~n 204 (279)
..+.+++.+
T Consensus 118 p~l~~ll~~ 126 (154)
T PLN02757 118 ELMVDVVND 126 (154)
T ss_pred HHHHHHHHH
Confidence 455555543
No 45
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=71.58 E-value=6.8 Score=35.14 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcc-cccc-cccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIG-CLPW-ITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFING 192 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg-~~P~-~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 192 (279)
-++.+.+.++++.++|.+.|+++++|+-. .-+. ... .. .=|..+.+.++.+++.+|+. +++.
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs~----------a~-----~~~g~v~~air~iK~~~pdl-~vi~ 112 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSGSA----------AD-----DEDGPVIQAIKLIREEFPEL-LIAC 112 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCcccc----------cc-----CCCChHHHHHHHHHHhCCCc-EEEE
Confidence 36778888999999999999999997432 2222 110 00 01234556778888888875 4445
Q ss_pred ec
Q 043563 193 HG 194 (279)
Q Consensus 193 D~ 194 (279)
|+
T Consensus 113 Dv 114 (320)
T cd04824 113 DV 114 (320)
T ss_pred ee
Confidence 54
No 46
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=71.46 E-value=4.3 Score=37.22 Aligned_cols=70 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred hcccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCccccccccc
Q 043563 75 YLSKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITR 150 (279)
Q Consensus 75 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~ 150 (279)
...+.+++-|+|+||+...-... .....-..+......+.+++..++.++.-+|+..+.|.++..|....
T Consensus 96 ~~~~~~~~~~a~gnd~A~gga~~------~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVGGARS------TEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cCcccccCcccccccHhhhcccc------ccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 34677899999999997533211 11110022334556677889999999999999999999999998875
No 47
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=70.92 E-value=18 Score=32.51 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
-++.+...++++.++|.+.|+++++|+. +-+.. .+..+. |..+.+.+..+++.+|+.- ++.|+
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~g----------s~A~~~-----~g~v~~air~iK~~~pdl~-vi~DV 121 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-KDAKG----------SDTWDD-----NGLLARMVRTIKAAVPEMM-VIPDI 121 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCc----------ccccCC-----CChHHHHHHHHHHHCCCeE-EEeee
Confidence 4677888899999999999999999642 22211 111111 3455677888888888863 44554
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=68.55 E-value=23 Score=31.76 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
-++.+.+.++++.++|.+.|+++++|.. +.+.. .+..+. |..+.+.+..+++.+|+. +++.|+
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~g----------s~A~~~-----~g~v~~air~iK~~~p~l-~vi~Dv 111 (314)
T cd00384 49 SVDSLVEEAEELADLGIRAVILFGIPEH-KDEIG----------SEAYDP-----DGIVQRAIRAIKEAVPEL-VVITDV 111 (314)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCc----------ccccCC-----CChHHHHHHHHHHhCCCc-EEEEee
Confidence 4677888899999999999999999643 22211 111111 234567788888888875 444554
No 49
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=68.07 E-value=21 Score=32.09 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCc-ccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPI-GCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGH 193 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lppl-g~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 193 (279)
-++.+...++++.++|.+.|++++++|- .+-+... +..+. |.-+...+..+++++|+. +++.|
T Consensus 52 s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs----------~A~~~-----~g~v~~air~iK~~~p~l-~vi~D 115 (320)
T cd04823 52 SIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGS----------EAYNP-----DNLVCRAIRAIKEAFPEL-GIITD 115 (320)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccc----------cccCC-----CChHHHHHHHHHHhCCCc-EEEEe
Confidence 4677888899999999999999999532 1222111 11111 334567788888888875 44555
Q ss_pred c
Q 043563 194 G 194 (279)
Q Consensus 194 ~ 194 (279)
+
T Consensus 116 V 116 (320)
T cd04823 116 V 116 (320)
T ss_pred e
Confidence 5
No 50
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=67.94 E-value=14 Score=26.86 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=32.9
Q ss_pred HHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Q 043563 121 QQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGH 193 (279)
Q Consensus 121 ~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 193 (279)
+.+++|.+.|+++++|. |.+.... ....+.+...+++++.++++.++.+.+
T Consensus 48 ~~l~~l~~~g~~~v~vv--------Plfl~~G--------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 48 EALDELAAQGATRIVVV--------PLFLLAG--------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHcCCCEEEEE--------eeEeCCC--------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 34677888899999883 4455432 111234556667777788888887754
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=65.88 E-value=17 Score=32.71 Aligned_cols=63 Identities=11% Similarity=0.089 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
-++.+.+.++++.++|.+.|+++++|.. +-+.. .+..+. |..+...++.+++++|+. +++.|+
T Consensus 57 s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~g----------s~A~~~-----~g~v~rair~iK~~~p~l-~vi~DV 119 (323)
T PRK09283 57 SIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDG----------SEAYNP-----DGLVQRAIRAIKKAFPEL-GVITDV 119 (323)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCccc----------ccccCC-----CCHHHHHHHHHHHhCCCc-EEEEee
Confidence 4677788899999999999999999532 22211 111111 334567788888888876 445565
No 52
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=61.86 E-value=35 Score=30.84 Aligned_cols=64 Identities=14% Similarity=0.285 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 116 VYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 116 v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
++.+.+.++++.++|.+.|+++++.+ |...... .....+. |..+...+..+++.+|+. +++.|+
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~-----gs~a~~~-----~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE-----GSEAYNP-----DGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------GGGGST-----TSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc-----hhcccCC-----CChHHHHHHHHHHhCCCc-EEEEec
Confidence 57777889999999999999999832 2222211 1111111 234557788888889985 555665
No 53
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=60.47 E-value=1.1e+02 Score=26.06 Aligned_cols=116 Identities=16% Similarity=0.051 Sum_probs=60.2
Q ss_pred ccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEeccCCcccccccccccCC
Q 043563 77 SKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLERLYNLGA--RKIVVFELGPIGCLPWITRNNKH 154 (279)
Q Consensus 77 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~L~~~Ga--r~~~v~~lpplg~~P~~~~~~~~ 154 (279)
..+++++.+|..+.-........ ..............+..+...+.++..... .++++.+++|... .... ...
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~~--~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~--~~~~-~~~ 174 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEWG--DNKEINPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHF--EGGD-WNS 174 (263)
T ss_pred CCCEEEEEcchhhhhcchhcccC--CCcCcchHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCccc--cccc-ccc
Confidence 67899999999998531110000 000111222233445666666676665554 6677777765431 1110 001
Q ss_pred CCCCh-----hhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHHHHHHh
Q 043563 155 TGQCV-----EDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVGYDAII 203 (279)
Q Consensus 155 ~~~~~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 203 (279)
++.|. ...+.....+|+.+...+ ..+.++.+.|+...+.....
T Consensus 175 gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r~ 222 (263)
T PF13839_consen 175 GGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFRP 222 (263)
T ss_pred CCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhccc
Confidence 23344 123455666666665544 14677889999655555443
No 54
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=59.34 E-value=7.8 Score=28.45 Aligned_cols=51 Identities=27% Similarity=0.337 Sum_probs=33.7
Q ss_pred HHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 122 QLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 122 ~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
.+++|.+.|+++|+|. |.++... ....+-+.+.++.++..+|+.++.+...
T Consensus 42 ~l~~l~~~g~~~ivvv--------P~fL~~G--------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 42 ALERLVAQGARRIVVV--------PYFLFPG--------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp CCHHHHCCTCSEEEEE--------EESSSSS--------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHcCCCeEEEE--------eeeecCc--------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 4578888999999884 5555431 1111236778888899999998888654
No 55
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=58.26 E-value=26 Score=27.31 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhCCCCeEEEEecchHHHHHHh---------------CCCCCCCccCCCCcccccccCccccCCCCCCCCC
Q 043563 173 LPAMLQNLTTSLKGSNFINGHGHGVGYDAII---------------NPSKYGIADASNPCCTAFFNGTSGCIPYLRPCNN 237 (279)
Q Consensus 173 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~---------------nP~~yGf~~~~~~Cc~~~~~~~~~C~~~~~~C~~ 237 (279)
|+-+|+.+++..-+.-+++.-+...+.+-+. --.++||.-+. + .-..
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf~v~D-------~-----------s~~~ 99 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGFNVAD-------F-----------SDDE 99 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT--EEE-------------------TTGT
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEe-------c-----------ccCC
Confidence 3566777776544556777777776665432 12355663211 0 0012
Q ss_pred CCCceeecCCCccHHHHHHHHHHHhc
Q 043563 238 TNKHYFWDGYHPTEDVYSILASGCIN 263 (279)
Q Consensus 238 ~~~y~fwD~~HPT~~~h~~ia~~~~~ 263 (279)
-+.|++-|.+||..+|+-.+-+.+..
T Consensus 100 y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 100 YEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCceeeecccCchhhHHHHHHHHHH
Confidence 36799999999999999888877653
No 56
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=51.95 E-value=22 Score=31.28 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
=+..+.+.+..|.+.|.|.++++++||- ...... ++... .=|.-.-..+..|+..+|+. +++.|+
T Consensus 67 G~~rL~e~l~plv~~Gl~sViLfgvv~~----~~Kd~~---gs~Ad-------s~~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 67 GVNRLKEELAPLVAKGLRSVILFGVVPE----ALKDPT---GSEAD-------SDNGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCc----cccCcc---ccccc-------CCCCcHHHHHHHHHHhCcce-EEEeee
Confidence 4667899999999999999999999742 222111 11111 11223345677888889986 555555
No 57
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=49.82 E-value=43 Score=23.37 Aligned_cols=65 Identities=12% Similarity=-0.018 Sum_probs=32.7
Q ss_pred cCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHH---HHHHHHHHHHHHHhhCCCCe-EEEEe
Q 043563 129 LGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSY---FNNMLPAMLQNLTTSLKGSN-FINGH 193 (279)
Q Consensus 129 ~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~---~N~~L~~~l~~l~~~~~~~~-i~~~D 193 (279)
-|||.||++.++=..-.|..........+....+..-..+ .-++|+++++.|+++.++.+ -.++|
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 5899999998874431111111111112223332222222 33567777777777887754 34455
No 58
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=49.14 E-value=16 Score=25.52 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=15.6
Q ss_pred HHHHHHHHHHcCCcEEEEecc
Q 043563 119 LSQQLERLYNLGARKIVVFEL 139 (279)
Q Consensus 119 ~~~~v~~L~~~Gar~~~v~~l 139 (279)
+.+.+.+|.+.||+.|+++.+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 445568899999999999765
No 59
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=48.65 E-value=73 Score=23.69 Aligned_cols=51 Identities=29% Similarity=0.543 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Q 043563 119 LSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGH 193 (279)
Q Consensus 119 ~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 193 (279)
+.+.+++|.+.|+++++|. |.+.... . |-+.+...+++++++ |+.++.+..
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G----~-----------h~~~i~~~~~~~~~~-~~~~i~~~~ 97 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG----V-----------LMDRIEEQVAELAAE-PGIEFVLAP 97 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC----c-----------hHHHHHHHHHHHHhC-CCceEEECC
Confidence 3455677888999998884 4444321 0 112355566777766 777776643
No 60
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=48.38 E-value=39 Score=30.33 Aligned_cols=65 Identities=9% Similarity=0.138 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Q 043563 115 LVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG 194 (279)
Q Consensus 115 ~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 194 (279)
.++.+.+.++++.++|.+.|+++++|+-+ .....++ -+-.-|-.+++.++.+++.+|+. +++.|+
T Consensus 59 s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~gs----------~A~~~~givqravr~ik~~~p~l-~iitDv 123 (330)
T COG0113 59 SLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETGS----------EAYDPDGIVQRAVRAIKEAFPEL-VVITDV 123 (330)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCcccc----------cccCCCChHHHHHHHHHHhCCCe-EEEeee
Confidence 47778888999999999999999998632 1111110 00111234566777888888743 444454
No 61
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=47.34 E-value=34 Score=30.59 Aligned_cols=18 Identities=44% Similarity=0.501 Sum_probs=13.3
Q ss_pred cceEEEEecchhhhhHhh
Q 043563 78 KSVFIVSIGSNDYINNYL 95 (279)
Q Consensus 78 ~sL~~i~iG~ND~~~~~~ 95 (279)
+-+=+++||+||+....+
T Consensus 196 ~~~DF~SIGtNDLtQy~l 213 (293)
T PF02896_consen 196 KEVDFFSIGTNDLTQYTL 213 (293)
T ss_dssp TTSSEEEEEHHHHHHHHH
T ss_pred HHCCEEEEChhHHHHHHh
Confidence 336689999999986433
No 62
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=46.76 E-value=26 Score=25.94 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEecc
Q 043563 117 YKLSQQLERLYNLGARKIVVFEL 139 (279)
Q Consensus 117 ~~~~~~v~~L~~~Gar~~~v~~l 139 (279)
+.+.+.+.+|.++||+.|+|+.+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45777889999999999999764
No 63
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.35 E-value=26 Score=32.53 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=35.1
Q ss_pred HHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecc
Q 043563 125 RLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGH 195 (279)
Q Consensus 125 ~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 195 (279)
.+.+.|+.+++ -+-|+||.|.-... +.++..+++++|++++.-+|..
T Consensus 327 e~i~~g~~nvI--clqPFGCmPnhI~~----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVI--CLQPFGCMPNHIVS----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceE--EecCccCCcHHHHH----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 45677888754 57799999954321 3677888999999998888875
No 64
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=43.93 E-value=61 Score=28.74 Aligned_cols=51 Identities=18% Similarity=0.204 Sum_probs=39.0
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHHHhhCCC----CeEEEEecchHHHHHHhCCCCCCCccC
Q 043563 157 QCVEDTNQIVSYFNNMLPAMLQNLTTSLKG----SNFINGHGHGVGYDAIINPSKYGIADA 213 (279)
Q Consensus 157 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~----~~i~~~D~~~~~~~i~~nP~~yGf~~~ 213 (279)
+..+.+..-.+.||.+|...=+++..++.- --++|=|.|.+|++ .||.+.+
T Consensus 177 ~~~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 177 QNAAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 445566677889999999888888777642 34888999999986 7887654
No 65
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=41.57 E-value=90 Score=28.02 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccCCccc------------------ccccccccC--C-----CCCChhhhhHH-
Q 043563 112 AQLLVYKLSQQLERLYNLGARKIVVFELGPIGC------------------LPWITRNNK--H-----TGQCVEDTNQI- 165 (279)
Q Consensus 112 ~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~------------------~P~~~~~~~--~-----~~~~~~~~~~~- 165 (279)
.+++++.+..+++-|++-|+.=|++=++-++-+ .|.+.+..- + +..-.+.++.+
T Consensus 138 fd~l~~ay~eq~~~Li~gG~D~iLiET~~D~l~~KaA~~a~~~~~~~~~~~LPv~~s~Ti~~sG~tl~Gq~~~a~~~~l~ 217 (311)
T COG0646 138 FDELVEAYREQVEGLIDGGADLILIETIFDTLNAKAAVFAAREVFEELGVRLPVMISGTITDSGRTLSGQTIEAFLNSLE 217 (311)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEehhccHHHHHHHHHHHHHHHHhcCCcccEEEEEEEecCceecCCCcHHHHHHHhh
Confidence 678999999999999999999999988877654 333322110 0 00000011110
Q ss_pred -----HHHHH-----HHHHHHHHHHHhh-------C-----C---CCeEEEEecchHHHHHHhCCCCCCCccCCCCcccc
Q 043563 166 -----VSYFN-----NMLPAMLQNLTTS-------L-----K---GSNFINGHGHGVGYDAIINPSKYGIADASNPCCTA 220 (279)
Q Consensus 166 -----~~~~N-----~~L~~~l~~l~~~-------~-----~---~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~ 220 (279)
+-.+| ..++..++.+... + | +.++.|-+....|.+.+..-.+=|+.+.-..|||+
T Consensus 218 ~~~~~~vGlNCa~Gp~~m~~~l~~ls~~~~~~vs~~PNAGLP~~~g~~~~Y~~~p~~~a~~~~~f~~~g~vnIvGGCCGT 297 (311)
T COG0646 218 HLGPDAVGLNCALGPDEMRPHLRELSRIADAFVSVYPNAGLPNAFGERAVYDLTPEYMAEALAEFAEEGGVNIVGGCCGT 297 (311)
T ss_pred ccCCcEEeeccccCHHHHHHHHHHHHhccCceEEEeCCCCCCcccCCccccCCCHHHHHHHHHHHHHhCCceeeccccCC
Confidence 00011 1334444444432 1 2 34566777778888888777777888888899997
No 66
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=40.96 E-value=1.1e+02 Score=23.48 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEe
Q 043563 117 YKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGH 193 (279)
Q Consensus 117 ~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 193 (279)
..+.+.+++|.+.|+++|+|..+ +.... ..| ..|.+.+++++ ++..+|.+..
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl--------~l~~G--------------~e~-~di~~~v~~~~--~~~~~i~~g~ 107 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSL--------HIIPG--------------EEY-EKLKREVDAFK--KGFKKIKLGR 107 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeC--------eeECc--------------HHH-HHHHHHHHHHh--CCCceEEEcc
Confidence 44667789999999999999543 33211 123 46666777766 5666666653
No 67
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=40.52 E-value=80 Score=25.99 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEec
Q 043563 112 AQLLVYKLSQQLERLYNLGARKIVVFE 138 (279)
Q Consensus 112 ~~~~v~~~~~~v~~L~~~Gar~~~v~~ 138 (279)
+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 24 ~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 24 IQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 556778899999999999999887644
No 68
>PRK13660 hypothetical protein; Provisional
Probab=39.03 E-value=1.9e+02 Score=23.94 Aligned_cols=58 Identities=9% Similarity=0.106 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Q 043563 112 AQLLVYKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFIN 191 (279)
Q Consensus 112 ~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 191 (279)
+..+-..+.+.|.+|++.|.+.|++-+ .+|. -..-...+-+|++++|+.++..
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg--alG~-------------------------d~wAaEvvl~LK~~yp~lkL~~ 76 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG--QLGV-------------------------ELWAAEVVLELKEEYPDLKLAV 76 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC--cchH-------------------------HHHHHHHHHHHHhhCCCeEEEE
Confidence 445667888999999999999887744 2221 1111345667777788877766
Q ss_pred Eecch
Q 043563 192 GHGHG 196 (279)
Q Consensus 192 ~D~~~ 196 (279)
+=-+.
T Consensus 77 ~~PF~ 81 (182)
T PRK13660 77 ITPFE 81 (182)
T ss_pred EeCcc
Confidence 54443
No 69
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=35.98 E-value=17 Score=28.55 Aligned_cols=16 Identities=31% Similarity=0.538 Sum_probs=14.1
Q ss_pred HcCCcEEEEeccCCcc
Q 043563 128 NLGARKIVVFELGPIG 143 (279)
Q Consensus 128 ~~Gar~~~v~~lpplg 143 (279)
..|||+|+++|+|.+-
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 5799999999999864
No 70
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=33.07 E-value=80 Score=24.47 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=23.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhC
Q 043563 159 VEDTNQIVSYFNNMLPAMLQNLTTSL 184 (279)
Q Consensus 159 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 184 (279)
.+..+.++..||..|.+.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55678899999999999999999876
No 71
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=31.53 E-value=1.7e+02 Score=24.57 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecch
Q 043563 117 YKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHG 196 (279)
Q Consensus 117 ~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~ 196 (279)
..+...++.|.+.|+++|.+..+ +. . ...++.+.+.+|+++|+..-+-.
T Consensus 136 ~Tl~~ai~~L~~~G~~~I~v~~l--l~-~----------------------------~~gl~~l~~~~p~v~i~~~~id~ 184 (207)
T TIGR01091 136 GTMIAALDLLKKRGAKKIKVLSI--VA-A----------------------------PEGIEAVEKAHPDVDIYTAAIDE 184 (207)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ec-C----------------------------HHHHHHHHHHCCCCEEEEEEECC
Confidence 46778889999999999988776 11 0 13456677789999998876544
No 72
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=28.65 E-value=22 Score=23.67 Aligned_cols=8 Identities=50% Similarity=1.581 Sum_probs=6.9
Q ss_pred eecCCCcc
Q 043563 243 FWDGYHPT 250 (279)
Q Consensus 243 fwD~~HPT 250 (279)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 79999995
No 73
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=27.74 E-value=99 Score=23.47 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=23.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhC
Q 043563 159 VEDTNQIVSYFNNMLPAMLQNLTTSL 184 (279)
Q Consensus 159 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 184 (279)
.+..+.++..||..|.+.|+++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999876
No 74
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=27.33 E-value=2.6e+02 Score=25.74 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=60.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecchhhhhHhhhccccCCCCCCChHHHHHHHHHHHHHHHH
Q 043563 45 LNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSNDYINNYLETSLYDTSKRYTPQQFAQLLVYKLSQQLE 124 (279)
Q Consensus 45 ~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 124 (279)
.+..+|++...+.++.. +........+-++...+|.+|-. + +.++
T Consensus 70 ~~~e~q~~~v~~vK~~~-------~~a~~d~~~~l~V~aavg~~~~~--~--------------------------er~~ 114 (352)
T PF00478_consen 70 MSIEEQAEEVKKVKRYY-------PNASKDEKGRLLVAAAVGTRDDD--F--------------------------ERAE 114 (352)
T ss_dssp SCHHHHHHHHHHHHTHH-------TTHHBHTTSCBCEEEEEESSTCH--H--------------------------HHHH
T ss_pred CCHHHHHHHHhhhcccc-------ccccccccccceEEEEecCCHHH--H--------------------------HHHH
Confidence 46788888887765432 12223334556677788887621 1 1236
Q ss_pred HHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec--chHHHHHH
Q 043563 125 RLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHG--HGVGYDAI 202 (279)
Q Consensus 125 ~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~--~~~~~~i~ 202 (279)
.|.++|+. ++++.... .|++...+.++.+++.+|+..|+-.++ +....+++
T Consensus 115 ~L~~agvD-~ivID~a~--------------------------g~s~~~~~~ik~ik~~~~~~~viaGNV~T~e~a~~L~ 167 (352)
T PF00478_consen 115 ALVEAGVD-VIVIDSAH--------------------------GHSEHVIDMIKKIKKKFPDVPVIAGNVVTYEGAKDLI 167 (352)
T ss_dssp HHHHTT-S-EEEEE-SS--------------------------TTSHHHHHHHHHHHHHSTTSEEEEEEE-SHHHHHHHH
T ss_pred HHHHcCCC-EEEccccC--------------------------ccHHHHHHHHHHHHHhCCCceEEecccCCHHHHHHHH
Confidence 67788995 55555322 233444567889999999988888775 66677777
Q ss_pred hC
Q 043563 203 IN 204 (279)
Q Consensus 203 ~n 204 (279)
+-
T Consensus 168 ~a 169 (352)
T PF00478_consen 168 DA 169 (352)
T ss_dssp HT
T ss_pred Hc
Confidence 64
No 75
>COG1903 CbiD Cobalamin biosynthesis protein CbiD [Coenzyme metabolism]
Probab=27.06 E-value=4.1e+02 Score=24.63 Aligned_cols=89 Identities=18% Similarity=0.255 Sum_probs=55.2
Q ss_pred ccccccCCCCCCCCccccCHHHHHHHHHHHHHHHHHHhcCChhHHHhhcccceEEEEecch--hhhhHhhhccccCCCCC
Q 043563 28 SGSCGILPETGSPFGRCLNFEEQVGLFQDSVKSLQQRYFQILVDFSNYLSKSVFIVSIGSN--DYINNYLETSLYDTSKR 105 (279)
Q Consensus 28 ~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~~~sL~~i~iG~N--D~~~~~~~~~~~~~~~~ 105 (279)
+||-.++.+|+ ...|.|-..++..+.......+. . .-.-+++-.|.+ |+...++.
T Consensus 167 vGGISILGTTG--Iv~P~S~~a~~~si~~~l~~~r~-----------~-~~~~iv~~~Gn~g~~~a~~~~~--------- 223 (367)
T COG1903 167 VGGISILGTTG--IVEPMSEEAYLASIRSELDVARA-----------A-GLDHVVFCPGNTGEDYARKLFI--------- 223 (367)
T ss_pred ccceEeecCCc--ccCcCChHHHHHHHHHHHHHHHh-----------c-CCcEEEEccChhHHHHHHHhcC---------
Confidence 56777777776 34567778888877765543221 1 223344455655 33333321
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccC
Q 043563 106 YTPQQFAQLLVYKLSQQLERLYNLGARKIVVFELG 140 (279)
Q Consensus 106 ~~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lp 140 (279)
.++..+-.+.+-+-..|+...++|.+++++++.|
T Consensus 224 -~~~~~~v~~~n~vG~~l~~a~~~~~~~i~i~G~p 257 (367)
T COG1903 224 -LPEQAIVKMGNFVGSMLKEARELGVKEILIFGHP 257 (367)
T ss_pred -CchHHHhhHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 1223334556677788889999999999999987
No 76
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=26.63 E-value=2.2e+02 Score=22.05 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHH
Q 043563 121 QQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYF 169 (279)
Q Consensus 121 ~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~ 169 (279)
+.+++|.+.|+|+|+|+-+ .+. ..|.+.+-++-..+
T Consensus 81 ~~l~~l~~~G~~~i~v~p~-------gF~------~D~~Etl~di~~e~ 116 (135)
T cd00419 81 DALEELAKEGVKNVVVVPI-------GFV------SDHLETLYELDIEY 116 (135)
T ss_pred HHHHHHHHcCCCeEEEECC-------ccc------cccHHHHHHHHHHH
Confidence 4568889999999988532 233 26777776655444
No 77
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=25.74 E-value=2.4e+02 Score=23.65 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecch
Q 043563 117 YKLSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHG 196 (279)
Q Consensus 117 ~~~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~ 196 (279)
..+...++.|.+.|++++.+..+ +.+ ...++.+.+.+|+.+|+..-+-.
T Consensus 138 ~Tl~~ai~~L~~~G~~~I~~~~l--l~~-----------------------------~~gl~~l~~~~p~v~i~~~~iD~ 186 (209)
T PRK00129 138 GSAIAAIDLLKKRGAKNIKVLCL--VAA-----------------------------PEGIKALEEAHPDVEIYTAAIDE 186 (209)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--ecC-----------------------------HHHHHHHHHHCCCcEEEEEeecC
Confidence 46777889999999999988776 111 24456677888999988765543
No 78
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=25.43 E-value=1e+02 Score=26.98 Aligned_cols=25 Identities=32% Similarity=0.410 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Q 043563 114 LLVYKLSQQLERLYNLGARKIVVFE 138 (279)
Q Consensus 114 ~~v~~~~~~v~~L~~~Gar~~~v~~ 138 (279)
.++.-+.+..+.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 3455566778889999999999988
No 79
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=25.24 E-value=85 Score=25.07 Aligned_cols=24 Identities=38% Similarity=0.517 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCc
Q 043563 119 LSQQLERLYNLGARKIVVFELGPI 142 (279)
Q Consensus 119 ~~~~v~~L~~~Gar~~~v~~lppl 142 (279)
+.+.|++|.+.|+++++++.+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 456678999999999999887654
No 80
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=23.40 E-value=2.8e+02 Score=25.22 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCcEEEEeccCCcccccccccccCCCCCChhhhh---HH------------------HHHHHHHHHHHH
Q 043563 119 LSQQLERLYNLGARKIVVFELGPIGCLPWITRNNKHTGQCVEDTN---QI------------------VSYFNNMLPAML 177 (279)
Q Consensus 119 ~~~~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~~~~~~~~~~---~~------------------~~~~N~~L~~~l 177 (279)
+.+.|++|.+.|.++++++-+-|. +... .+....+ .. -..|.+.+.+.+
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyPq-----yS~s-----Tt~s~~~~~~~al~~~~~~~~i~~I~~~~~~p~yI~a~a~~I 173 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYPQ-----YSSS-----TTGSYVDELARALKELRGQPKISTIPDYYDEPLYIEALADSI 173 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCcc-----cccc-----cHHHHHHHHHHHHHhcCCCCceEEecCccCChHHHHHHHHHH
Confidence 446778899999999998877553 2111 1111111 10 123455555555
Q ss_pred HHHHhhCC-CCeEEEEecchHHHHHHhC
Q 043563 178 QNLTTSLK-GSNFINGHGHGVGYDAIIN 204 (279)
Q Consensus 178 ~~l~~~~~-~~~i~~~D~~~~~~~i~~n 204 (279)
++--++++ +-..++|..|++=...++.
T Consensus 174 ~~~~~~~~~~~~~llfSaHglP~~~~~~ 201 (320)
T COG0276 174 REKLAKHPRDDDVLLFSAHGLPKRYIDE 201 (320)
T ss_pred HHHHHhcCCCCeEEEEecCCCchhhhhc
Confidence 54444444 4457777888777766655
No 81
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=22.42 E-value=4.1e+02 Score=23.66 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=47.3
Q ss_pred HHHHHHHcCCcEEEEeccCCcccccccccccCC---------------CCCChhhhhHHHHHH---------------HH
Q 043563 122 QLERLYNLGARKIVVFELGPIGCLPWITRNNKH---------------TGQCVEDTNQIVSYF---------------NN 171 (279)
Q Consensus 122 ~v~~L~~~Gar~~~v~~lpplg~~P~~~~~~~~---------------~~~~~~~~~~~~~~~---------------N~ 171 (279)
.+.+|..+|.|.|+|+.-|- ..|.+....+. ..+....+- +++.| -.
T Consensus 37 ~l~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~-~a~~fv~~~~f~l~LGDNi~~~ 113 (286)
T COG1209 37 PLETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVL-IAEDFVGDDDFVLYLGDNIFQD 113 (286)
T ss_pred HHHHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHH-HHHhhcCCCceEEEecCceecc
Confidence 46788999999999988772 12334332211 111111111 12222 11
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecchHHHHHHhCCCCCCCccCC
Q 043563 172 MLPAMLQNLTTSLKGSNFINGHGHGVGYDAIINPSKYGIADAS 214 (279)
Q Consensus 172 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~ 214 (279)
-|...++.+.++-+|+.|...-+ +||++||..+..
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~d 148 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVEFD 148 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEEEc
Confidence 56677777777667777776655 389999965443
No 82
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
Probab=21.07 E-value=76 Score=31.08 Aligned_cols=19 Identities=47% Similarity=0.665 Sum_probs=14.1
Q ss_pred cccceEEEEecchhhhhHhh
Q 043563 76 LSKSVFIVSIGSNDYINNYL 95 (279)
Q Consensus 76 ~~~sL~~i~iG~ND~~~~~~ 95 (279)
+.+-+=+++||+||+.. |.
T Consensus 443 lakevDFfSIGTNDLtQ-Yt 461 (574)
T COG1080 443 LAKEVDFFSIGTNDLTQ-YT 461 (574)
T ss_pred HHHhCCEeeecccHHHH-HH
Confidence 34556689999999985 53
No 83
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.59 E-value=1.2e+02 Score=22.42 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=13.9
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 043563 120 SQQLERLYNLGARKIVVF 137 (279)
Q Consensus 120 ~~~v~~L~~~Gar~~~v~ 137 (279)
.+.+++|.+.|+++|++.
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 345677889999998874
No 84
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=20.22 E-value=1.8e+02 Score=26.85 Aligned_cols=37 Identities=11% Similarity=0.201 Sum_probs=29.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCcEEEEeccCCccc
Q 043563 107 TPQQFAQLLVYKLSQQLERLYNLGARKIVVFELGPIGC 144 (279)
Q Consensus 107 ~~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~lpplg~ 144 (279)
+.++++..++..+.+.++.|+++|+|.|-+ .=|.+..
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~~ 196 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWAY 196 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchhh
Confidence 356888999999999999999999997544 5465543
No 85
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=20.08 E-value=2e+02 Score=24.39 Aligned_cols=39 Identities=8% Similarity=-0.000 Sum_probs=31.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecchHH
Q 043563 160 EDTNQIVSYFNNMLPAMLQNLTTSLKGSNFINGHGHGVG 198 (279)
Q Consensus 160 ~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 198 (279)
.........|-+.|..+++++++..|+++|++.-.+.++
T Consensus 120 ~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 120 GARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc
Confidence 334455778888999999999998999999999887665
Done!