BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043568
(453 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 24/315 (7%)
Query: 74 LRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR 133
L+ FS EL+ A+ FS ++G GGFG VY+G R++ D L VA+K+L
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKG--RLA---------DGTL-VAVKRLKE 72
Query: 134 QGFQGHK-EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS 192
+ QG + ++ EV + + H NL++L G+C ER LLVY M N S+ L
Sbjct: 73 ERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRE 128
Query: 193 RVPT--PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
R + PL W R +IA +ARGLAYLH+ D ++I RD K +NILLDE+++A + DFGL
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE--R 308
A+ + H + APEY+ TG+ + K+DV+ +GV+L ELITG+RA + R
Sbjct: 189 AKLMDYKDX-HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 309 NLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPK 368
++ LL+WV+ + + KK ++D L+GNY C P RPK
Sbjct: 248 LANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 306
Query: 369 MSEVVDIL-GNIISE 382
MSEVV +L G+ ++E
Sbjct: 307 MSEVVRMLEGDGLAE 321
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 24/315 (7%)
Query: 74 LRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR 133
L+ FS EL+ A+ F ++G GGFG VY+G R++ D L VA+K+L
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKG--RLA---------DGXL-VAVKRLKE 64
Query: 134 QGFQGHK-EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS 192
+ QG + ++ EV + + H NL++L G+C ER LLVY M N S+ L
Sbjct: 65 ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRE 120
Query: 193 RVPT--PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
R + PL W R +IA +ARGLAYLH+ D ++I RD K +NILLDE+++A + DFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE--R 308
A+ + H + APEY+ TG+ + K+DV+ +GV+L ELITG+RA + R
Sbjct: 181 AKLMDYKDX-HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 309 NLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPK 368
++ LL+WV+ + + KK ++D L+GNY C P RPK
Sbjct: 240 LANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 298
Query: 369 MSEVVDIL-GNIISE 382
MSEVV +L G+ ++E
Sbjct: 299 MSEVVRMLEGDGLAE 313
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 159/297 (53%), Gaps = 22/297 (7%)
Query: 79 FAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG 138
+L+ AT F LIG G FG VY+GV+R + VA+K+ + QG
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------------VALKRRTPESSQG 78
Query: 139 HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLL-SRVPT- 196
+E+ E+ L +HP+LV L+G+C E +E +L+Y+ M N +L+ HL S +PT
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEM----ILIYKYMENGNLKRHLYGSDLPTM 134
Query: 197 PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPP 256
++W RL+I AARGL YLH +I RD K+ NILLDE++ K++DFG++++G
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 257 EGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQK 316
G H Y PEY GRLT KSDV+SFGVVL+E++ R A+ ++LPR
Sbjct: 192 LGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 317 LLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
L EW ++ + I+DP L CL + RP M +V+
Sbjct: 252 LAEWAVE-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 158/297 (53%), Gaps = 22/297 (7%)
Query: 79 FAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG 138
+L+ AT F LIG G FG VY+GV+R + VA+K+ + QG
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------------VALKRRTPESSQG 78
Query: 139 HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLL-SRVPT- 196
+E+ E+ L +HP+LV L+G+C E +E +L+Y+ M N +L+ HL S +PT
Sbjct: 79 IEEFETEIETLSFCRHPHLVSLIGFCDERNEM----ILIYKYMENGNLKRHLYGSDLPTM 134
Query: 197 PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPP 256
++W RL+I AARGL YLH +I RD K+ NILLDE++ K++DFG++++G
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 257 EGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQK 316
H Y PEY GRLT KSDV+SFGVVL+E++ R A+ ++LPR
Sbjct: 192 LDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 317 LLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
L EW ++ + I+DP L CL + RP M +V+
Sbjct: 252 LAEWAVE-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 137/250 (54%), Gaps = 28/250 (11%)
Query: 77 FSFAELKSATRGFSRALL------IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ 130
FSF ELK+ T F + +GEGGFG VY+G V ++ + + +D+ ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA--AMVDITTEE 72
Query: 131 LNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL 190
L +Q + E+ + +H NLV+L+G+ ++ D+ LVY M N SL D L
Sbjct: 73 LKQQ-------FDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL 121
Query: 191 --LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDF 248
L P PL+W R KIAQ AA G+ +LHE I RD K++NILLDE + AK+SDF
Sbjct: 122 SCLDGTP-PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 177
Query: 249 GLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVER 308
GLAR Y APE ++ G +T KSD++SFGVVL E+ITG AV+
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 309 NLPRNEQKLL 318
+ R Q LL
Sbjct: 237 H--REPQLLL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 138/250 (55%), Gaps = 28/250 (11%)
Query: 77 FSFAELKSATRGFSRALL------IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ 130
FSF ELK+ T F + +GEGGFG VY+G V ++ + + +D+ ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA--AMVDITTEE 66
Query: 131 LNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL 190
L +Q + E+ + +H NLV+L+G+ ++ D+ LVY M N SL D L
Sbjct: 67 LKQQ-------FDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL 115
Query: 191 --LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDF 248
L P PL+W R KIAQ AA G+ +LHE I RD K++NILLDE + AK+SDF
Sbjct: 116 SCLDGTP-PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 171
Query: 249 GLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVER 308
GLAR Y APE ++ G +T KSD++SFGVVL E+ITG AV+
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 230
Query: 309 NLPRNEQKLL 318
+ R Q LL
Sbjct: 231 H--REPQLLL 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 138/250 (55%), Gaps = 28/250 (11%)
Query: 77 FSFAELKSATRGFSRALL------IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ 130
FSF ELK+ T F + +GEGGFG VY+G V ++ + + +D+ ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA--AMVDITTEE 72
Query: 131 LNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL 190
L +Q + E+ + +H NLV+L+G+ ++ D+ LVY M N SL D L
Sbjct: 73 LKQQ-------FDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL 121
Query: 191 --LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDF 248
L P PL+W R KIAQ AA G+ +LHE I RD K++NILLDE + AK+SDF
Sbjct: 122 SCLDGTP-PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 177
Query: 249 GLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVER 308
GLAR Y APE ++ G +T KSD++SFGVVL E+ITG AV+
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 309 NLPRNEQKLL 318
+ R Q LL
Sbjct: 237 H--REPQLLL 244
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 137/250 (54%), Gaps = 28/250 (11%)
Query: 77 FSFAELKSATRGF-SRALLIG-----EGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ 130
FSF ELK+ T F R + +G EGGFG VY+G V ++ + + +D+ ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLA--AMVDITTEE 63
Query: 131 LNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL 190
L +Q + E+ +H NLV+L+G+ ++ D+ LVY N SL D L
Sbjct: 64 LKQQ-------FDQEIKVXAKCQHENLVELLGFSSDGDDL----CLVYVYXPNGSLLDRL 112
Query: 191 --LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDF 248
L P PL+W R KIAQ AA G+ +LHE I RD K++NILLDE + AK+SDF
Sbjct: 113 SCLDGTP-PLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 168
Query: 249 GLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVER 308
GLAR Y APE ++ G +T KSD++SFGVVL E+ITG AV+
Sbjct: 169 GLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 227
Query: 309 NLPRNEQKLL 318
+ R Q LL
Sbjct: 228 H--REPQLLL 235
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 47/293 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK--EWINEVNFLGVV 152
IG G FG V H+ H S DVA+K L Q F + E++ EV + +
Sbjct: 45 IGAGSFGTV-----------HRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 153 KHPNLVKLVGYCAEDDERG-----MQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+HPN+V +G + + R +Y L+H + L R RL +A
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER--------RRLSMA 143
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
D A+G+ YLH + ++ RD K+ N+L+D+ Y K+ DFGL+R L
Sbjct: 144 YDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL--XSKXAA 200
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ KSDV+SFGV+L+EL T ++ P + + +
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
+ + + +EG C T +P RP + ++D+L +I
Sbjct: 261 PRNLNPQVAAIIEG----------------CWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 36 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 78
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 79 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 132
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA + H
Sbjct: 133 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 248
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 16 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 58
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 59 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 112
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA + H
Sbjct: 113 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 44 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 86
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 87 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 140
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA + H
Sbjct: 141 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 256
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 47/293 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK--EWINEVNFLGVV 152
IG G FG V H+ H S DVA+K L Q F + E++ EV + +
Sbjct: 45 IGAGSFGTV-----------HRAEWHGS--DVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 153 KHPNLVKLVGYCAEDDERG-----MQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+HPN+V +G + + R +Y L+H + L R RL +A
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER--------RRLSMA 143
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
D A+G+ YLH + ++ R+ K+ N+L+D+ Y K+ DFGL+R L
Sbjct: 144 YDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAA 200
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ KSDV+SFGV+L+EL T ++ P + + +
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
+ + + +EG C T +P RP + ++D+L +I
Sbjct: 261 PRNLNPQVAAIIEG----------------CWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 43 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 85
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 86 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 139
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 140 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 255
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 18 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 60
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 61 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 114
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 115 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 44 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 86
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 87 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 140
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 141 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 256
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 16 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 58
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 59 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 112
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 113 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 228
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 21 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 63
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 64 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 117
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 118 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 21 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 63
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T I + IA+
Sbjct: 64 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 117
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 118 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 109/240 (45%), Gaps = 35/240 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 16 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 58
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY Q +V + SL HL + T I + IA+
Sbjct: 59 RKTRHVNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQ 112
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 113 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 270 XXYAAPEYVQT---GRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVS 326
+ APE ++ + +SDV++FG+VLYEL+TG+ N+ +Q + R Y+S
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLS 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 32 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 74
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T + IA+
Sbjct: 75 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQ 128
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
ARG+ YLH + +I RD K++NI L ED K+ DFGLA + H
Sbjct: 129 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 270 XXYAAPEYVQ---TGRLTAKSDVWSFGVVLYELITGR 303
+ APE ++ + + +SDV++FG+VLYEL+TG+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG GGFG VYR + + HD D++ Q + ++ E ++K
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDIS------QTIENVRQ---EAKLFAMLK 64
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS--RVPTPLAWIARLKIAQDAA 211
HPN++ L G C ++ LV E L + +LS R+P + + A A
Sbjct: 65 HPNIIALRGVCLKEP----NLCLVMEFARGGPL-NRVLSGKRIPPDIL----VNWAVQIA 115
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYK--------AKLSDFGLARQGPPEGLGHXX 263
RG+ YLH+E +I RD K+SNIL+ + + K++DFGLAR+ H
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW------HRT 169
Query: 264 XXXXXXXXYA--APEYVQTGRLTAKSDVWSFGVVLYELITG 302
YA APE ++ + SDVWS+GV+L+EL+TG
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 70
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 71 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 32 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 74
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY Q +V + SL HL + T + IA+
Sbjct: 75 RKTRHVNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQ 128
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
ARG+ YLH + +I RD K++NI L ED K+ DFGLA + H
Sbjct: 129 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 270 XXYAAPEYVQ---TGRLTAKSDVWSFGVVLYELITGR 303
+ APE ++ + + +SDV++FG+VLYEL+TG+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 80 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQ 134
VF E + A + + +G+G FG VY GV + V D+ +T VAIK +N
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEA 57
Query: 135 GFQGHK-EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ E++NE + + ++V+L+G ++ G L++ ELM L+ +L S
Sbjct: 58 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSL 113
Query: 194 VP--------TPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
P P + +++A + A G+AYL+ + + RD N ++ ED+ K+
Sbjct: 114 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 170
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFG+ R + +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 171 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-----RQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K LN Q Q K NEV L
Sbjct: 20 IGSGSFGTVYKG-----------KWHG---DVAVKMLNVTAPTPQQLQAFK---NEVGVL 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY + Q +V + SL HL + T + IA+
Sbjct: 63 RKTRHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQ 116
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
ARG+ YLH + +I RD K++NI L ED K+ DFGLA H
Sbjct: 117 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 270 XXYAAPEYVQ---TGRLTAKSDVWSFGVVLYELITGR 303
+ APE ++ + + +SDV++FG+VLYEL+TG+
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHKEWINEVNFLGVVK 153
+GEG FG +VS + + + VA+K L G Q W E++ L +
Sbjct: 22 LGEGHFG-------KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H +++K G C + E+ +Q LV E + SL D+L R LA + L AQ G
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEG 129
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX--XXXX 271
+AYLH + I R+ N+LLD D K+ DFGLA+ PEG +
Sbjct: 130 MAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVF 185
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ + SDVWSFGV LYEL+T
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 36/235 (15%)
Query: 74 LRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR 133
LR+ ELK R ++G G FG VY+G+ G K+ VAIK LN
Sbjct: 32 LRILKETELK-------RVKVLGSGAFGTVYKGI-------WVPEGETVKIPVAIKILNE 77
Query: 134 Q-GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM------HNKSL 186
G + + E+++E + + HP+LV+L+G C + + +L+ + + H ++
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI 137
Query: 187 EDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLS 246
LL L W ++ A+G+ YL E +L+ RD N+L+ K++
Sbjct: 138 GSQLL------LNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 182
Query: 247 DFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGLAR + + + A E + + T +SDVWS+GV ++EL+T
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 36/235 (15%)
Query: 74 LRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR 133
LR+ ELK R ++G G FG VY+G+ G K+ VAIK LN
Sbjct: 9 LRILKETELK-------RVKVLGSGAFGTVYKGI-------WVPEGETVKIPVAIKILNE 54
Query: 134 Q-GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM------HNKSL 186
G + + E+++E + + HP+LV+L+G C + + +L+ + + H ++
Sbjct: 55 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI 114
Query: 187 EDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLS 246
LL L W ++ A+G+ YL E +L+ RD N+L+ K++
Sbjct: 115 GSQLL------LNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 159
Query: 247 DFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGLAR + + + A E + + T +SDVWS+GV ++EL+T
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHKEWINEVNFLGVVK 153
+GEG FG +VS + + + VA+K L G Q W E++ L +
Sbjct: 22 LGEGHFG-------KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H +++K G C + E+ +Q LV E + SL D+L R LA + L AQ G
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEG 129
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX--XXXX 271
+AYLH + I R+ N+LLD D K+ DFGLA+ PEG +
Sbjct: 130 MAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPVF 185
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ + SDVWSFGV LYEL+T
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 78
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 79 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 72
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 73 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 36 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 88 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 143
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 78
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 79 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 80 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 85
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 86 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 75
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--------PLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 76 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 85
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--------PLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 86 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 107
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 108 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N ++ ED+ K+ DFG+ R
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 123/298 (41%), Gaps = 34/298 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 35 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 87 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 142
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 143 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKK 330
+ A E +QT + T KSDVWSFGV+L+EL+T R P + Y+ ++
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRR 253
Query: 331 FHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDE 388
L+ YC C + + RP SE+V + I S + E
Sbjct: 254 L-------LQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHE 301
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 55 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 107 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 162
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 163 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 29 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 81 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 136
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 137 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 56 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 108 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 163
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 164 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHKEWINEVNFLGVVK 153
+GEG FG +VS + + + VA+K L G Q W E+ L +
Sbjct: 17 LGEGHFG-------KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI-AQDAAR 212
H ++VK G C + E+ +Q LV E + SL D+L P +A+L + AQ
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICE 123
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX--XXX 270
G+AYLH + I R N+LLD D K+ DFGLA+ PEG +
Sbjct: 124 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPV 179
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ + SDVWSFGV LYEL+T
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 37 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 89 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 144
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 34 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 86 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 141
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 142 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 32 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 84 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 139
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 140 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 36 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 88 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 143
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 35 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 87 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 142
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 143 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 38 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 90 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 145
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHKEWINEVNFLGVVK 153
+GEG FG +VS + + + VA+K L G Q W E+ L +
Sbjct: 16 LGEGHFG-------KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI-AQDAAR 212
H ++VK G C + E+ +Q LV E + SL D+L P +A+L + AQ
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICE 122
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX--XXX 270
G+AYLH + I R N+LLD D K+ DFGLA+ PEG +
Sbjct: 123 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAK-AVPEGHEYYRVREDGDSPV 178
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ + SDVWSFGV LYEL+T
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 38 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 90 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 145
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 37 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 89 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 144
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL--GHXXXXXXXXX 270
G+ YL + + + RD N +LDE + K++DFGLAR + H
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 37 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 89 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 144
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + + +D K+ A+K LNR G +++ E +
Sbjct: 42 VIGRGHFGCVYHGTL-LDNDG-------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 94 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 149
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 150 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + R+G +++I E + + H
Sbjct: 15 IGSGQFGLVHLGYWL------------NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 61
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV+E M + L D+L ++ A L + D G+
Sbjct: 62 PKLVQLYGVCLEQ----APICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 116
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 117 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWAS 172
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 223
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNI 379
PRL + C ++P+ RP S ++ L I
Sbjct: 224 YKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 96 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 148 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 203
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 204 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+IG G FGCVY G + K+ A+K LNR G +++ E +
Sbjct: 37 VIGRGHFGCVYHGTL--------LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++ L+G C + L+V M + L + + + P + A+
Sbjct: 89 SHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAK 144
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG--HXXXXXXXXX 270
G+ +L + + + RD N +LDE + K++DFGLAR + H
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E +QT + T KSDVWSFGV+L+EL+T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + R+G +++I E + + H
Sbjct: 15 IGSGQFGLVHLGYWL------------NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 61
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV+E M + L D+L ++ A L + D G+
Sbjct: 62 PKLVQLYGVCLEQ----APICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 116
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 117 AYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWAS 172
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 223
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIIS 381
PRL + C ++P+ RP S ++ L I +
Sbjct: 224 YKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 95 IGEGGFGCVYRGVVR-VSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVV 152
+G+G FG VY GV + V D+ +T VAIK +N + E++NE + +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETR-------VAIKTVNEAASMRERIEFLNEASVMKEF 72
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARL 204
++V+L+G ++ G L++ ELM L+ +L S P P + +
Sbjct: 73 NCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
++A + A G+AYL+ + + RD N + ED+ K+ DFG+ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ +PE ++ G T SDVWSFGVVL+E+ T
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + R+G +++I E + + H
Sbjct: 13 IGSGQFGLVHLGYWL------------NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 59
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV+E M + L D+L ++ A L + D G+
Sbjct: 60 PKLVQLYGVCLEQ----APICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 114
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 115 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWAS 170
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 221
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNI 379
PRL + C ++P+ RP S ++ L I
Sbjct: 222 YKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 38/285 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + R+G +++I E + + H
Sbjct: 18 IGSGQFGLVHLGYWL------------NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 64
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV+E M + L D+L ++ A L + D G+
Sbjct: 65 PKLVQLYGVCLEQ----APICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 119
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 120 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWAS 175
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 226
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNI 379
PRL + C ++P+ RP S ++ L I
Sbjct: 227 YKPRLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGLAR
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG FG V+ ++ + K+ VA+K L K++ E L ++H
Sbjct: 21 LGEGAFGKVFL------AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 74
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMH----NKSLEDHLLSRV-------PTPLAWIAR 203
++VK G C E D ++V+E M NK L H V PT L
Sbjct: 75 EHIVKFYGVCVEGDPL----IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
L IAQ A G+ YL + + RD T N L+ E+ K+ DFG++R
Sbjct: 131 LHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ PE + + T +SDVWS GVVL+E+ T + L NE
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVVK 153
+GEG FG +VS + + + VA+K L H+ W E++ L +
Sbjct: 39 LGEGHFG-------KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H +++K G C + +Q LV E + SL D+L R LA + L AQ G
Sbjct: 92 HEHIIKYKGCCEDAGAASLQ--LVMEYVPLGSLRDYL-PRHSIGLAQL--LLFAQQICEG 146
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX----XX 269
+AYLH + I RD N+LLD D K+ DFGLA+ P GH
Sbjct: 147 MAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEXYRVREDGDSP 200
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ + SDVWSFGV LYEL+T
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 19 LGGGQFGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 66
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 67 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVERNLPRNEQKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T G P +LLE RP K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 239 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 49/330 (14%)
Query: 70 RANDLRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK 129
R + V FA+ AT S ++G G FG V G +++ S ++ VAIK
Sbjct: 17 RGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIK 67
Query: 130 QLNRQGF--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE 187
L + G+ + ++++ E + +G HPN+++L G + ++V E M N SL
Sbjct: 68 TL-KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL- 121
Query: 188 DHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSD 247
D L + I + + + A G+ YL D + RD NIL++ + K+SD
Sbjct: 122 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSD 178
Query: 248 FGLAR--QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRR 304
FGL+R + PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 179 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 305 AV----ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLT 360
+++ + + P + + L++D C
Sbjct: 238 PYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQ 276
Query: 361 KQPKSRPKMSEVVDILGNIISEISSQDEVT 390
K +RPK ++V IL +I S +T
Sbjct: 277 KDRNNRPKFEQIVSILDKLIRNPGSLKIIT 306
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 48/296 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V G +++ +L VAIK L + G+ + ++++ E + +G
Sbjct: 29 VIGAGEFGEVCSGRLKLPGK--------RELPVAIKTL-KVGYTEKQRRDFLGEASIMGQ 79
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN++ L G + ++V E M N SL D L + I + + + +
Sbjct: 80 FDHPNIIHLEGVVT----KSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGIS 134
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXXXXXX 269
G+ YL D + RD NIL++ + K+SDFGL+R + PE +
Sbjct: 135 AGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIP 190
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVERNLPRNEQKLLE----WVRPY 324
+ APE + + T+ SDVWS+G+V++E+++ G R ++ K +E P
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPM 250
Query: 325 VSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
+ + L++D C K+ SRPK E+V++L +I
Sbjct: 251 DCPAALYQLMLD---------------------CWQKERNSRPKFDEIVNMLDKLI 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 90 SRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK--EWINEVN 147
+R +IG G FG VY+G+++ SS + + VAIK L + G+ + +++ E
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKE-------VPVAIKTL-KAGYTEKQRVDFLGEAG 98
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+G H N+++L G ++ +++ E M N +L D L + + + +
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPM----MIITEYMENGAL-DKFLREKDGEFSVLQLVGML 153
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXX 265
+ A G+ YL + + RD NIL++ + K+SDFGL+R + PE +
Sbjct: 154 RGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT-YTTSG 209
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + T+ SDVWSFG+V++E++T
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 33 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 82
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 137
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 138 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 195 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 253
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 254 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 292
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 293 PKFEQIVSILDKLIRNPGSLKIIT 316
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + R+G +++I E + + H
Sbjct: 16 IGSGQFGLVHLGYWL------------NKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSH 62
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV E M + L D+L ++ A L + D G+
Sbjct: 63 PKLVQLYGVCLEQ----APICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 117
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 118 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWAS 173
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 224
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNI 379
PRL + C ++P+ RP S ++ L I
Sbjct: 225 YKPRLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 19 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 66
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 67 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFT-AHAGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVERNLPRNEQKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T G P +LLE RP K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 239 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 55
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 110
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 168 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 227 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 265
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 266 PKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 55
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSL-DSFLRK 110
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL+R
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 168 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 227 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 265
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 266 PKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 49/324 (15%)
Query: 76 VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG 135
V FA+ AT S ++G G FG V G +++ S ++ VAIK L + G
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSK--------KEISVAIKTL-KVG 84
Query: 136 F--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ + ++++ E + +G HPN+++L G + ++V E M N SL D L +
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRK 139
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
I + + + A G+ YL D + RD NIL++ + K+SDFGL R
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 253 -QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV---- 306
+ PE + + +PE + + T+ SDVWS+G+VL+E+++ G R
Sbjct: 197 LEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 307 ERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
+++ + + P + + L++D C K +R
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------------CWQKDRNNR 294
Query: 367 PKMSEVVDILGNIISEISSQDEVT 390
PK ++V IL +I S +T
Sbjct: 295 PKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +K VAIK + ++G ++I E + + H
Sbjct: 35 IGSGQFGLVHLGYWL------------NKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSH 81
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P LV+L G C E LV+E M + L D+L ++ A L + D G+
Sbjct: 82 PKLVQLYGVCLEQ----APICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 136
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AYL E +I RD N L+ E+ K+SDFG+ R + +A+
Sbjct: 137 AYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWAS 192
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLI 334
PE R ++KSDVWSFGV+++E+ + + N +E V D +
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRL 243
Query: 335 IDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNI 379
PRL + C ++P+ RP S ++ L I
Sbjct: 244 YKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG FG V+ ++ H K+ VA+K L +++ E L +++H
Sbjct: 26 LGEGAFGKVF------LAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH 79
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR-------------VPTPLAWI 201
++V+ G C E G L+V+E M + L L S P PL
Sbjct: 80 QHIVRFFGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
L +A A G+ YL + RD T N L+ + K+ DFG++R
Sbjct: 136 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE + + T +SDVWSFGVVL+E+ T
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG FG V+ ++ H K+ VA+K L +++ E L +++H
Sbjct: 20 LGEGAFGKVFL------AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR-------------VPTPLAWI 201
++V+ G C E G L+V+E M + L L S P PL
Sbjct: 74 QHIVRFFGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
L +A A G+ YL + RD T N L+ + K+ DFG++R
Sbjct: 130 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE + + T +SDVWSFGVVL+E+ T
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 25 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 79 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYV 325
+ APE ++ G T SD+WSFGVVL+E+ + + L NEQ L +V
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVL-----KFV 245
Query: 326 SDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
D + + C C PK RP E+V++L
Sbjct: 246 MDGGYLD-------QPDNC---PERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG FG V+ ++ H K+ VA+K L +++ E L +++H
Sbjct: 49 LGEGAFGKVFL------AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH 102
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR-------------VPTPLAWI 201
++V+ G C E G L+V+E M + L L S P PL
Sbjct: 103 QHIVRFFGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
L +A A G+ YL + RD T N L+ + K+ DFG++R
Sbjct: 159 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE + + T +SDVWSFGVVL+E+ T
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 22 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 75
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 76 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 132 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYV 325
+ APE ++ G T SD+WSFGVVL+E+ + + L NEQ L +V
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVL-----KFV 242
Query: 326 SDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
D + + C C PK RP E+V++L
Sbjct: 243 MDGGYLD-------QPDNC---PERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 22 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 69 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 124 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTA 179
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 23 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 70 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 125 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 25 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 79 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ G T SD+WSFGVVL+E+ +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 21 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 68 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 27 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 74 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 129 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTA 184
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 117/302 (38%), Gaps = 43/302 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G G FG V + R DVAIKQ+ + + K +I E+ L V
Sbjct: 15 VVGRGAFGVVCKAKWRAK-------------DVAIKQIESESER--KAFIVELRQLSRVN 59
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR-LKIAQDAAR 212
HPN+VKL G C LV E SL + L P P A + ++
Sbjct: 60 HPNIVKLYGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+AYLH LI RD K N+LL K+ DFG A +
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD-----IQTHMTNNKGSAA 168
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKF 331
+ APE + + K DV+S+G++L+E+IT R+ + E P
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-----------EIGGPAFRIMWAV 217
Query: 332 HLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEVTL 391
H P L N C +K P RP M E+V I+ +++ DE
Sbjct: 218 HNGTRPPLIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ 273
Query: 392 QP 393
P
Sbjct: 274 YP 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 30 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 77 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 132 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTA 187
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 29 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 76 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 131 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTA 186
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 25 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 79 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYV 325
+ APE ++ G T SD+WSFGVVL+E+ + + L NEQ L +V
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVL-----KFV 245
Query: 326 SDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
D + + C C PK RP E+V++L
Sbjct: 246 MDGGYLD-------QPDNC---PERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 21 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 68 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 117/302 (38%), Gaps = 43/302 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G G FG V + R DVAIKQ+ + + K +I E+ L V
Sbjct: 16 VVGRGAFGVVCKAKWRAK-------------DVAIKQIESESER--KAFIVELRQLSRVN 60
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR-LKIAQDAAR 212
HPN+VKL G C LV E SL + L P P A + ++
Sbjct: 61 HPNIVKLYGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+AYLH LI RD K N+LL K+ DFG A +
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD-----IQTHMTNNKGSAA 169
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKF 331
+ APE + + K DV+S+G++L+E+IT R+ + E P
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-----------EIGGPAFRIMWAV 218
Query: 332 HLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEVTL 391
H P L N C +K P RP M E+V I+ +++ DE
Sbjct: 219 HNGTRPPLIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ 274
Query: 392 QP 393
P
Sbjct: 275 YP 276
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 48/301 (15%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V G +++ + VAIK L + G+ + ++++ E + +G
Sbjct: 50 VIGAGEFGEVCSGRLKLPGK--------RDVAVAIKTL-KVGYTEKQRRDFLCEASIMGQ 100
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN+V L G RG ++V E M N +L D L + I + + + A
Sbjct: 101 FDHPNVVHLEGVVT----RGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIA 155
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXXXXXX 269
G+ YL D + RD NIL++ + K+SDFGL+R + PE + +
Sbjct: 156 AGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGGKIP 211
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAV----ERNLPRNEQKLLEWVRPY 324
+ APE +Q + T+ SDVWS+G+V++E+++ G R +++ + ++ P
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPM 271
Query: 325 VSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEIS 384
+ L++D C K+ RPK ++V IL +I +
Sbjct: 272 DCPAGLHQLMLD---------------------CWQKERAERPKFEQIVGILDKMIRNPN 310
Query: 385 S 385
S
Sbjct: 311 S 311
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 16 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 62
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 63 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 118 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTA 173
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 21 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 68 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 27 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 74 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 129 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTA 184
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 46/299 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 19 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 66
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 67 PNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVERNLPRNEQKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T G P +LLE RP K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEK 238
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDE 388
+ L+ C P RP +E+ + E S DE
Sbjct: 239 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 26 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 73 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 128 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 31 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 78 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 133 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTA 188
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 25 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 79 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYV 325
+ APE ++ G T SD+WSFGVVL+E+ + + L NEQ L +V
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVL-----KFV 245
Query: 326 SDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
D + + C C PK RP E+V++L
Sbjct: 246 MDGGYLD-------QPDNC---PERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 31/238 (13%)
Query: 77 FSFAELKSATRGFSRAL---------LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVA 127
F+F + A R F++ + +IG G FG V G ++V ++ VA
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGK--------REICVA 61
Query: 128 IKQLNRQGF--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
IK L + G+ + +++++E + +G HPN++ L G + +++ E M N S
Sbjct: 62 IKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITEYMENGS 116
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D L + I + + + G+ YL D + RD NIL++ + K+
Sbjct: 117 L-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKV 172
Query: 246 SDFGLAR--QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
SDFG++R + PE + + APE + + T+ SDVWS+G+V++E+++
Sbjct: 173 SDFGMSRVLEDDPEA-AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 24 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 77
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 78 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 133
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + RD N ++ D+ K+ DFG+ R
Sbjct: 134 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYV 325
+ APE ++ G T SD+WSFGVVL+E+ + + L NEQ V +V
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQ-----VLKFV 244
Query: 326 SDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
D + + C C PK RP E+V++L
Sbjct: 245 MDGGYLD-------QPDNC---PERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 31/239 (12%)
Query: 77 FSFAELKSATRGFSRAL---------LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVA 127
F+F + A R F++ + +IG G FG V G +++ ++ VA
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK--------REIFVA 65
Query: 128 IKQLNRQGF--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
IK L + G+ + +++++E + +G HPN++ L G + +++ E M N S
Sbjct: 66 IKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEFMENGS 120
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D L + I + + + A G+ YL D + RD NIL++ + K+
Sbjct: 121 L-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKV 176
Query: 246 SDFGLAR---QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
SDFGL+R + + APE +Q + T+ SDVWS+G+V++E+++
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 241 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 74 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 185
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 245
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 246 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 241 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 241 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 240
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 241 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 17 LGAGQFGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 63
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 64 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I R+ + +NIL+ + K++DFGLAR + + A
Sbjct: 119 AFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTA 174
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 57/321 (17%)
Query: 78 SFAELKSATRGFSRAL---------LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAI 128
++ E A R F+R + +IG G G V G +RV + VAI
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ--------RDVPVAI 82
Query: 129 KQLNRQGF--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSL 186
K L + G+ + +++++E + +G HPN+++L G RG ++V E M N SL
Sbjct: 83 KAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSL 137
Query: 187 EDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLS 246
D L + + + + G+ YL D + RD N+L+D + K+S
Sbjct: 138 -DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 247 DFGLAR--QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GR 303
DFGL+R + P+ + + APE + ++ SDVWSFGVV++E++ G
Sbjct: 194 DFGLSRVLEDDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 304 RA----VERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCL 359
R R++ + ++ P L++D C
Sbjct: 253 RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLD---------------------CW 291
Query: 360 TKQPKSRPKMSEVVDILGNII 380
K RP+ S++V +L +I
Sbjct: 292 HKDRAQRPRFSQIVSVLDALI 312
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-----NRQGFQGHKEWINEVNFL 149
IG G FG VY+G H DVA+K L + FQ + NEV L
Sbjct: 44 IGSGSFGTVYKG-----------KWHG---DVAVKILKVVDPTPEQFQAFR---NEVAVL 86
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+H N++ +GY +D+ +V + SL HL + T + IA+
Sbjct: 87 RKTRHVNILLFMGYMTKDN-----LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQ 140
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ YLH + +I RD K++NI L E K+ DFGLA
Sbjct: 141 TAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 270 XXYAAPEYVQ---TGRLTAKSDVWSFGVVLYELITG 302
+ APE ++ + +SDV+S+G+VLYEL+TG
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 25/238 (10%)
Query: 73 DLRVFSFAELKSATRGFSRAL-----LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVA 127
DL AE+K R + +IG+G FG VY G +++ A
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHG--------EYIDQAQNRIQCA 53
Query: 128 IKQLNR-QGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSL 186
IK L+R Q + ++ E + + HPN++ L+G + G+ +L+ + H L
Sbjct: 54 IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE--GLPHVLLPYMCHGDLL 111
Query: 187 EDHLLSRVPTPLAWIARL-KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
+ R P + L ARG+ YL E+ + + RD N +LDE + K+
Sbjct: 112 Q---FIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKV 165
Query: 246 SDFGLARQGPPEGL--GHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+DFGLAR + A E +QT R T KSDVWSFGV+L+EL+T
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 56 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 109
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 110 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR G
Sbjct: 166 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 22 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 70 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR------QGPPEGLGHXXXXXXX 268
YL ++ I RD N L+ E++ K++DFGL+R P G
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-------AKF 175
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + + KSDVW+FGV+L+E+ T
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 58/306 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 23 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 70
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 71 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR------QGPPEGLGHXXXXXXX 268
YL ++ I RD N L+ E++ K++DFGL+R P G
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-------AKF 176
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRP 323
+ APE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 324 YVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEI 383
K + L+ C P RP +E+ + E
Sbjct: 237 EGCPEKVYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 384 SSQDEV 389
S DEV
Sbjct: 276 SISDEV 281
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 79 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 132
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 133 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR G
Sbjct: 189 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG FG V+ ++ + S K+ VA+K L K++ E L ++H
Sbjct: 23 LGEGAFGKVFL------AECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI------------- 201
++VK G C + D ++V+E M + L L + P + +
Sbjct: 77 EHIVKFYGVCGDGDPL----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 202 -ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
L IA A G+ YL + + RD T N L+ + K+ DFG++R
Sbjct: 133 SQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE + + T +SDVWSFGV+L+E+ T
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 74 PNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 185
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 34 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 81
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 82 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 138 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 193
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 194 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 253
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 254 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 292
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 25 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 79 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + R+ N ++ D+ K+ DFG+ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ G T SD+WSFGVVL+E+ +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 42/233 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHK-EWINEVNFLG 150
IGEG FG V++ + G ++ VA+K L + + ++ E +
Sbjct: 55 IGEGAFGRVFQA---------RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 151 VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS------------------ 192
+PN+VKL+G CA G L++E M L + L S
Sbjct: 106 EFDNPNIVKLLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 193 RV----PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDF 248
RV P PL+ +L IA+ A G+AYL E + + RD T N L+ E+ K++DF
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADF 218
Query: 249 GLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
GL+R + PE + R T +SDVW++GVVL+E+ +
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G G V+ G +GH VA+K L +QG ++ E N + ++H
Sbjct: 21 LGAGQAGEVWMGYY---------NGHTK---VAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M N SL D L + L L +A A G+
Sbjct: 68 QRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ E I RD + +NIL+ + K++DFGLAR + + A
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE + G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 23 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 70
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 71 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 182
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 242
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 243 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 74 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 185
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 245
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 246 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 74 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 185
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 23 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 70
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 71 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 127 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 182
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 242
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 243 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFLGVV 152
+IGEG FG V + R+ D ++D AIK++ + H+++ E+ L +
Sbjct: 22 VIGEGNFGQVLKA--RIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 72
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIAR------ 203
HPN++ L+G C + RG L + H L+ SRV P IA
Sbjct: 73 GHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
L A D ARG+ YL ++ Q I RD NIL+ E+Y AK++DFGL+R +
Sbjct: 130 SSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG---QE 183
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ + A E + T SDVWS+GV+L+E+++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQG-FQGHKEWINEVNFLGVVK 153
+G+G FG VY G R +++ VA+K +N + E++NE + +
Sbjct: 26 LGQGSFGMVYEGNAR------DIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 79
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------TPLAWIARLK 205
++V+L+G + +G L+V ELM + L+ +L S P P ++
Sbjct: 80 CHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 135
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A + A G+AYL+ + + + R+ N ++ D+ K+ DFG+ R
Sbjct: 136 MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE ++ G T SD+WSFGVVL+E+ +
Sbjct: 193 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFLGVV 152
+IGEG FG V + R+ D ++D AIK++ + H+++ E+ L +
Sbjct: 32 VIGEGNFGQVLKA--RIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIAR------ 203
HPN++ L+G C + RG L + H L+ SRV P IA
Sbjct: 83 GHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
L A D ARG+ YL ++ Q I RD NIL+ E+Y AK++DFGL+R +
Sbjct: 140 SSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG---QE 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ + A E + T SDVWS+GV+L+E+++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 22 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 70 PNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTA 181
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 25 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 73 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 129 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 184
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 74 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 130 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT-AHAGAKFPIKWTA 185
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 21 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 69 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + + KSDVW+FGV+L+E+ T
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
Query: 74 LRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR 133
LR+ EL+ + ++G G FG VY+G+ G + K+ VAIK L
Sbjct: 11 LRILKETELR-------KVKVLGSGAFGTVYKGI-------WIPDGENVKIPVAIKVLRE 56
Query: 134 Q-GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS 192
+ +KE ++E + V P + +L+G C + + +L+ Y + + E+
Sbjct: 57 NTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRL 116
Query: 193 RVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR 252
L W ++ A+G++YL D +L+ RD N+L+ K++DFGLAR
Sbjct: 117 GSQDLLNWCMQI------AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
Query: 253 QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ + + A E + R T +SDVWS+GV ++EL+T
Sbjct: 168 LLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 57/321 (17%)
Query: 78 SFAELKSATRGFSRAL---------LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAI 128
++ E A R F+R + +IG G G V G +RV + VAI
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ--------RDVPVAI 82
Query: 129 KQLNRQGF--QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSL 186
K L + G+ + +++++E + +G HPN+++L G RG ++V E M N SL
Sbjct: 83 KAL-KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSL 137
Query: 187 EDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLS 246
D L + + + + G+ YL D + RD N+L+D + K+S
Sbjct: 138 -DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 247 DFGLAR--QGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GR 303
DFGL+R + P+ + APE + ++ SDVWSFGVV++E++ G
Sbjct: 194 DFGLSRVLEDDPDA-AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 304 RA----VERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCL 359
R R++ + ++ P L++D C
Sbjct: 253 RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLD---------------------CW 291
Query: 360 TKQPKSRPKMSEVVDILGNII 380
K RP+ S++V +L +I
Sbjct: 292 HKDRAQRPRFSQIVSVLDALI 312
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V G R + VA+K + + ++ E + + ++H
Sbjct: 14 IGKGEFGDVMLGDYRGNK-------------VAVKCIKNDATA--QAFLAEASVMTQLRH 58
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
NLV+L+G E E+G +V E M SL D+L SR + L LK + D +
Sbjct: 59 SNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL + RD N+L+ ED AK+SDFGL ++ + A
Sbjct: 116 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTA 167
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP 311
PE ++ + + KSDVWSFG++L+E+ + R +P
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 228 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 275
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L ++ + L +A + +
Sbjct: 276 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I R+ N L+ E++ K++DFGL+R + + A
Sbjct: 332 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 387
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 447
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 448 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 486
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V G R + VA+K + + ++ E + + ++H
Sbjct: 201 IGKGEFGDVMLGDYRGNK-------------VAVKCIKNDATA--QAFLAEASVMTQLRH 245
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
NLV+L+G E E+G +V E M SL D+L SR + L LK + D +
Sbjct: 246 SNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL + RD N+L+ ED AK+SDFGL ++ + A
Sbjct: 303 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTA 354
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP 311
PE ++ + + KSDVWSFG++L+E+ + R +P
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V G R + VA+K + + ++ E + + ++H
Sbjct: 29 IGKGEFGDVMLGDYRGNK-------------VAVKCIKNDATA--QAFLAEASVMTQLRH 73
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
NLV+L+G E E+G +V E M SL D+L SR + L LK + D +
Sbjct: 74 SNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL + RD N+L+ ED AK+SDFGL ++ + A
Sbjct: 131 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTA 182
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP 311
PE ++ + + KSDVWSFG++L+E+ + R +P
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 102
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 103 LRDYLQAHAER-IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G + VAIK L + G + ++ E + +KH
Sbjct: 17 LGNGQFGEVWMGT------------WNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKH 63
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M+ SL D L L + +A A G+
Sbjct: 64 DKLVQLYAVVSEEP-----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ I RD +++NIL+ K++DFGLAR + + A
Sbjct: 119 AYI-ERMNY--IHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIKWTA 174
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWV 321
PE GR T KSDVWSFG++L EL+T R + N +++LE V
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM--NNREVLEQV 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 98
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 99 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 154
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V RG ++ VAIK L + G+ + +E+++E + +G
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESC--------VAIKTL-KGGYTERQRREFLSEASIMGQ 73
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+HPN+++L G M +++ E M N +L D L I + + + A
Sbjct: 74 FEHPNIIRLEGVVTNS----MPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIA 128
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---QGPPEGLGHXXXXXXX 268
G+ YL E + RD NIL++ + K+SDFGL+R + +
Sbjct: 129 SGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + T+ SD WS+G+V++E+++
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V G R + VA+K + + ++ E + + ++H
Sbjct: 20 IGKGEFGDVMLGDYRGNK-------------VAVKCIKNDATA--QAFLAEASVMTQLRH 64
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
NLV+L+G E E+G +V E M SL D+L SR + L LK + D +
Sbjct: 65 SNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL + RD N+L+ ED AK+SDFGL ++ + A
Sbjct: 122 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-----SSTQDTGKLPVKWTA 173
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP 311
PE ++ + KSDVWSFG++L+E+ + R +P
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 104
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 105 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 160
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 106
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 107 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 162
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E + +
Sbjct: 39 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN 92
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 93 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 149 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 97
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 98 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 153
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 103
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 104 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 159
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFLGVV 152
+IGEG FG V + R+ D ++D AIK++ + H+++ E+ L +
Sbjct: 29 VIGEGNFGQVLKA--RIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 79
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIAR------ 203
HPN++ L+G C + RG L + H L+ SRV P IA
Sbjct: 80 GHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
L A D ARG+ YL ++ Q I R+ NIL+ E+Y AK++DFGL+R +
Sbjct: 137 SSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRG---QE 190
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ + A E + T SDVWS+GV+L+E+++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 117
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 118 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 173
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 246 SDFGLARQGPPEG-LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 102
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 103 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 87 RGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINE 145
R R +GEG FG +V + G ++ VA+K L + H + E
Sbjct: 21 RFLKRIRDLGEGHFG-------KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 73
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ L + H N+VK G C ED G++ L+ E + + SL+++L + + +LK
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLK 130
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A +G+ YL Q + RD N+L++ +++ K+ DFGL + +
Sbjct: 131 YAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 266 XXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + SDVWSFGV L+EL+T
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 105
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 106 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 161
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 192 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 239 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 294 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 349
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 87 RGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINE 145
R R +GEG FG +V + G ++ VA+K L + H + E
Sbjct: 9 RFLKRIRDLGEGHFG-------KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKE 61
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ L + H N+VK G C ED G++ L+ E + + SL+++L + + +LK
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLK 118
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A +G+ YL Q + RD N+L++ +++ K+ DFGL + +
Sbjct: 119 YAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 266 XXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + SDVWSFGV L+EL+T
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V RG ++ VAIK L + G+ + +E+++E + +G
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESC--------VAIKTL-KGGYTERQRREFLSEASIMGQ 71
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+HPN+++L G M +++ E M N +L D L I + + + A
Sbjct: 72 FEHPNIIRLEGVVTNS----MPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIA 126
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---QGPPEGLGHXXXXXXX 268
G+ YL E + RD NIL++ + K+SDFGL+R + +
Sbjct: 127 SGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + T+ SD WS+G+V++E+++
Sbjct: 184 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 130
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 131 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 186
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 192 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 239 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 294 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 349
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 16 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 63 EKLVQLYAVVSEEP-----IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 117
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 118 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTA 173
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 174 PEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 117
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 118 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 173
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V G ++V ++ VAIK L + G+ + +++++E + +G
Sbjct: 21 VIGVGEFGEVCSGRLKVPGK--------REICVAIKTL-KAGYTDKQRRDFLSEASIMGQ 71
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN++ L G + +++ E M N SL D L + I + + +
Sbjct: 72 FDHPNIIHLEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIG 126
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXXXXXX 269
G+ YL D + RD NIL++ + K+SDFG++R + PE +
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKIP 182
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + T+ SDVWS+G+V++E+++
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 267 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 314
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 315 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 370
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL E+ +F I R+ N L+ E++ K++DFGL+R + + A
Sbjct: 371 EYL-EKKNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 426
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 427 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 486
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 487 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 525
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +++ VA+K L + G + ++ E N + ++H
Sbjct: 21 LGAGQFGEVWMGY------------YNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L ++ ++ E M SL D L S + + + A G+
Sbjct: 68 DKLVRLYAVVTREE----PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ + I RD + +N+L+ E K++DFGLAR + + A
Sbjct: 124 AYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTA 179
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + G T KSDVWSFG++LYE++T
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E + +
Sbjct: 53 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN 106
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 107 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 225 LGGGQYGEVYEGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 272
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C R ++ E M +L D+L + + L +A + +
Sbjct: 273 PNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL E+ +F I R+ N L+ E++ K++DFGL+R + + A
Sbjct: 329 EYL-EKKNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 384
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE-QKLLE----WVRPYVSDSK 329
PE + + + KSDVW+FGV+L+E+ T + + ++ +LLE RP K
Sbjct: 385 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 444
Query: 330 KFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEISSQDEV 389
+ L+ C P RP +E+ + E S DEV
Sbjct: 445 VYELM---------------------RACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 483
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++GEG FG V G ++ Q G K+ V +L+ + +E+++E +
Sbjct: 41 ILGEGEFGSVMEGNLK------QEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 154 HPNLVKLVGYCAEDDERGMQR-LLVYELMHNKSLEDHLL-SRV---PTPLAWIARLKIAQ 208
HPN+++L+G C E +G+ + +++ M L +LL SR+ P + LK
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
D A G+ YL + RD N +L +D ++DFGL+++
Sbjct: 155 DIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E + T+KSDVW+FGV ++E+ T
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V G ++V ++ VAIK L + G+ + +++++E + +G
Sbjct: 15 VIGVGEFGEVCSGRLKVPGK--------REICVAIKTL-KAGYTDKQRRDFLSEASIMGQ 65
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN++ L G + +++ E M N SL D L + I + + +
Sbjct: 66 FDHPNIIHLEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIG 120
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXXXXXX 269
G+ YL D + RD NIL++ + K+SDFG++R + PE +
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKIP 176
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + T+ SDVWS+G+V++E+++
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 39 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 93 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 149 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 65 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 118
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 119 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 175 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG ++V+ H+ +G + +K+L R + + ++ EV + ++
Sbjct: 17 VLGKGCFG----QAIKVT---HRETGEV----MVMKELIRFDEETQRTFLKEVKVMRCLE 65
Query: 154 HPNLVKLVGYCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HPN++K +G +D +RL + E + +L ++ + + W R+ A+D A
Sbjct: 66 HPNVLKFIGVLYKD-----KRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIAS 119
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR-----QGPPEGLGHXXX--- 264
G+AYLH +I RD + N L+ E+ ++DFGLAR + PEGL
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 265 ----XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRN 313
+ APE + K DV+SFG+VL E+I A LPR
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 45 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 98
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 99 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 155 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 15 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 62 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 117 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTA 172
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 173 PEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 38 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 92 HQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 148 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 42/220 (19%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 275 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 322 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 376
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR----------QGPPEGLGHXXX 264
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR QG
Sbjct: 377 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG---------- 423
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
+ APE GR T KSDVWSFG++L EL T R
Sbjct: 424 -AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 128/308 (41%), Gaps = 70/308 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-------EVN 147
IG+GGFG V++G R+ D K VAIK L +G E I EV
Sbjct: 27 IGKGGFGLVHKG--RLVKD---------KSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+ + HPN+VKL G M+ + +L H + H P+ W +L++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-------PIKWSVKLRLM 128
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYK--AKLSDFGLARQGPPEGLGHX 262
D A G+ Y+ + + ++ RD ++ NI L DE+ AK++DFGL++Q H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHS 182
Query: 263 XXXXXXXXXYAAPEYV--QTGRLTAKSDVWSFGVVLYELITGRRAVER---------NLP 311
+ APE + + T K+D +SF ++LY ++TG + N+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSE 371
R E +RP + + PRL C + PK RP S
Sbjct: 243 RE-----EGLRPTIPED------CPPRLRN------------VIELCWSGDPKKRPHFSY 279
Query: 372 VVDILGNI 379
+V L +
Sbjct: 280 IVKELSEL 287
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 17 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 64 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 118
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 119 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTA 174
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 55 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 108
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 109 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 165 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 192 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 239 EKLVQLYAVVSEEP-----IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 294 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 349
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 53 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFN 106
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 107 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 38 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 92 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 148 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 30 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 83
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 84 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 140 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 53 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 106
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 107 HQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+AR
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 193 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRH 239
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 240 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 294
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL----------ARQGPPEGLGHXXX 264
AY+ E M++ + RD + +NIL+ E+ K++DFGL ARQG
Sbjct: 295 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG---------- 341
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
+ APE GR T KSDVWSFG++L EL T R
Sbjct: 342 -AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ G +++ VA+K L + G + ++ E N + ++H
Sbjct: 20 LGAGQFGEVWMGY------------YNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +++ ++ E M SL D L S + + + A G+
Sbjct: 67 DKLVRLYAVVTKEE----PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ + I RD + +N+L+ E K++DFGLAR + + A
Sbjct: 123 AYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTA 178
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + G T KS+VWSFG++LYE++T
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 100
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L D+L + + I L+ +G+ YL + + I R+ T NIL++ + + K+
Sbjct: 101 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENRVKI 156
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + + APE + + + SDVWSFGVVLYEL T
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
VA+K+L + +++ E+ L ++H N+VK G C R ++ L+ E + S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEFLPYGS 102
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
L ++L + + I L+ +G+ YL + + I RD T NIL++ + + K+
Sbjct: 103 LREYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
DFGL + P + + APE + + + SDVWSFGVVLYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 19 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L L + +A A G+
Sbjct: 66 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 120
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 121 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTA 176
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 23 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M+ SL D L L + ++ A G+
Sbjct: 70 EKLVQLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 125 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 23 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M+ SL D L L + ++ A G+
Sbjct: 70 EKLVQLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 125 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M SL D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G G FG V +GV R+ ++DVAIK L +QG + +E + E + +
Sbjct: 18 LGCGNFGSVRQGVYRM---------RKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQL 67
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS-RVPTPLAWIARLKIAQDAA 211
+P +V+L+G C + +LV E+ L L+ R P++ +A L +
Sbjct: 68 DNPYIVRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQVS 120
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL E+ + RD N+LL + AK+SDFGL++ G +
Sbjct: 121 MGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 177
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + +++SDVWS+GV ++E ++
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWI-NE 145
F L+G+G F VYR S H + L+VAIK ++++ G + + NE
Sbjct: 13 FKVGNLLGKGSFAGVYRA----------ESIH-TGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
V +KHP++++L Y + + LV E+ HN + +L +RV P +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSN----YVYLVLEMCHNGEMNRYLKNRV-KPFSENEARH 116
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
G+ YLH ++ RD SN+LL + K++DFGLA Q H
Sbjct: 117 FMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC 173
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRN 313
Y +PE +SDVWS G + Y L+ GR + + +N
Sbjct: 174 GTPN--YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY GV + S L VA+K L + +E++ E + +KH
Sbjct: 40 LGGGQYGEVYVGVWKKYS-----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKH 87
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PNLV+L+G C + +V E M +L D+L + + L +A + +
Sbjct: 88 PNLVQLLGVCTLEP----PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
YL ++ I RD N L+ E++ K++DFGL+R + + A
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTA 199
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT 301
PE + + KSDVW+FGV+L+E+ T
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 27 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 136
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 137 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 237
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M L D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVNFLGVVK 153
+G G FG VY G V +D S L VA+K L Q +++ E +
Sbjct: 39 LGHGAFGEVYEGQVSGMPND------PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-----LAWIARLKIAQ 208
H N+V+ +G + + R ++ ELM L+ L P P LA + L +A+
Sbjct: 93 HQNIVRCIGVSLQS----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXX 265
D A G YL E I RD N LL AK+ DFG+A+
Sbjct: 149 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ PE G T+K+D WSFGV+L+E+ +
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 11 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 120
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 121 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 18 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 127
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 128 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 21 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 130
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 131 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 20 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 129
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 19 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 128
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 18 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI- 127
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 128 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-------EVN 147
IG+GGFG V++G R+ D K VAIK L +G E I EV
Sbjct: 27 IGKGGFGLVHKG--RLVKD---------KSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+ + HPN+VKL G M+ + +L H + H P+ W +L++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-------PIKWSVKLRLM 128
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYK--AKLSDFGLARQGPPEGLGHX 262
D A G+ Y+ + + ++ RD ++ NI L DE+ AK++DFG ++Q H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHS 182
Query: 263 XXXXXXXXXYAAPEYV--QTGRLTAKSDVWSFGVVLYELITGRRAVER---------NLP 311
+ APE + + T K+D +SF ++LY ++TG + N+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSE 371
R E +RP + + PRL C + PK RP S
Sbjct: 243 RE-----EGLRPTIPED------CPPRLRN------------VIELCWSGDPKKRPHFSY 279
Query: 372 VVDILGNI 379
+V L +
Sbjct: 280 IVKELSEL 287
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 42 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 151
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 152 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 23 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 132
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 133 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 20 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 129
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 20 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 129
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V+ G + VAIK L + G + ++ E + ++H
Sbjct: 26 LGQGCFGEVWMGT------------WNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LV+L +E+ +V E M L D L + L + +A A G+
Sbjct: 73 EKLVQLYAVVSEEP-----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
AY+ E M++ + RD + +NIL+ E+ K++DFGLAR + + A
Sbjct: 128 AYV-ERMNY--VHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTA 183
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
PE GR T KSDVWSFG++L EL T R
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 47/235 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ ++ VA+K + + G + ++ E N + ++H
Sbjct: 190 LGAGQFGEVWMAT------------YNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 236
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LVKL ++ ++ E M SL D L S + + + A G+
Sbjct: 237 DKLVKLHAVVTKEP-----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 291
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ + I RD + +NIL+ K++DFGLAR G + A
Sbjct: 292 AFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVG-----------AKFPIKWTA 337
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GR------------RAVERN--LPRNE 314
PE + G T KSDVWSFG++L E++T GR RA+ER +PR E
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 392
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 24 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 133
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 20 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 129
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 19 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 128
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 70/308 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-------EVN 147
IG+GGFG V++G R+ D K VAIK L +G E I EV
Sbjct: 27 IGKGGFGLVHKG--RLVKD---------KSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
+ + HPN+VKL G M+ + +L H + H P+ W +L++
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH-------PIKWSVKLRLM 128
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYK--AKLSDFGLARQGPPEGLGHX 262
D A G+ Y+ + + ++ RD ++ NI L DE+ AK++DF L++Q H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHS 182
Query: 263 XXXXXXXXXYAAPEYV--QTGRLTAKSDVWSFGVVLYELITGRRAVER---------NLP 311
+ APE + + T K+D +SF ++LY ++TG + N+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSE 371
R E +RP + + PRL C + PK RP S
Sbjct: 243 RE-----EGLRPTIPED------CPPRLRN------------VIELCWSGDPKKRPHFSY 279
Query: 372 VVDILGNI 379
+V L +
Sbjct: 280 IVKELSEL 287
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ-LNRQGFQGHKEWINEVNFLGVVK 153
+GEG FG +V H T+G L + K+ L + QG E E+++L +++
Sbjct: 21 LGEGSFG-------KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP+++KL DE ++V E N+ L D+++ R ++ + Q
Sbjct: 72 HPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFDYIVQR--DKMSEQEARRFFQQIISA 124
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H +++ RD K N+LLDE K++DFGL+ G+ YA
Sbjct: 125 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYA 178
Query: 274 APEYVQTGRLTA--KSDVWSFGVVLYELITGRRAVE--------RNLPRNEQKLLEWVRP 323
APE V +G+L A + DVWS GV+LY ++ R + +N+ L +++ P
Sbjct: 179 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 237
Query: 324 YVSDSKKFHLIIDP 337
+ K LI++P
Sbjct: 238 GAAGLIKRMLIVNP 251
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ-LNRQGFQGHKEWINEVNFLGVVK 153
+GEG FG +V H T+G L + K+ L + QG E E+++L +++
Sbjct: 22 LGEGSFG-------KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP+++KL DE ++V E N+ L D+++ R ++ + Q
Sbjct: 73 HPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFDYIVQR--DKMSEQEARRFFQQIISA 125
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H +++ RD K N+LLDE K++DFGL+ G+ YA
Sbjct: 126 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYA 179
Query: 274 APEYVQTGRLTA--KSDVWSFGVVLYELITGRRAVE--------RNLPRNEQKLLEWVRP 323
APE V +G+L A + DVWS GV+LY ++ R + +N+ L +++ P
Sbjct: 180 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 238
Query: 324 YVSDSKKFHLIIDP 337
+ K LI++P
Sbjct: 239 GAAGLIKRMLIVNP 252
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ-LNRQGFQGHKEWINEVNFLGVVK 153
+GEG FG +V H T+G L + K+ L + QG E E+++L +++
Sbjct: 12 LGEGSFG-------KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP+++KL DE ++V E N+ L D+++ R ++ + Q
Sbjct: 63 HPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFDYIVQR--DKMSEQEARRFFQQIISA 115
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H +++ RD K N+LLDE K++DFGL+ G+ YA
Sbjct: 116 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYA 169
Query: 274 APEYVQTGRLTA--KSDVWSFGVVLYELITGRRAVE--------RNLPRNEQKLLEWVRP 323
APE V +G+L A + DVWS GV+LY ++ R + +N+ L +++ P
Sbjct: 170 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 228
Query: 324 YVSDSKKFHLIIDP 337
+ K LI++P
Sbjct: 229 GAAGLIKRMLIVNP 242
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ-LNRQGFQGHKEWINEVNFLGVVK 153
+GEG FG +V H T+G L + K+ L + QG E E+++L +++
Sbjct: 16 LGEGSFG-------KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP+++KL DE ++V E N+ L D+++ R ++ + Q
Sbjct: 67 HPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFDYIVQR--DKMSEQEARRFFQQIISA 119
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H +++ RD K N+LLDE K++DFGL+ G+ YA
Sbjct: 120 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNYA 173
Query: 274 APEYVQTGRLTA--KSDVWSFGVVLYELITGRRAVE--------RNLPRNEQKLLEWVRP 323
APE V +G+L A + DVWS GV+LY ++ R + +N+ L +++ P
Sbjct: 174 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 232
Query: 324 YVSDSKKFHLIIDP 337
+ K LI++P
Sbjct: 233 GAAGLIKRMLIVNP 246
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 14 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 123
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 124 -----AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +R + L +K +++ E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK----------AKFLQEARILKQYSH 171
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS-----RVPTPLAWIARLKIAQD 209
PN+V+L+G C + +V EL+ L + RV T L++ D
Sbjct: 172 PNIVRLIGVCTQKQPI----YIVMELVQGGDFLTFLRTEGARLRVKT------LLQMVGD 221
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
AA G+ YL + I RD N L+ E K+SDFG++R+
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + GR +++SDVWSFG++L+E +
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVV 152
++GEG FG VY GV T+ K++VA+K + +KE +++E + +
Sbjct: 15 ILGEGFFGEVYEGV--------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HP++VKL+G E+ + L Y + H L R L + + + +
Sbjct: 67 DHPHIVKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICK 120
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
+AYL + RD NIL+ KL DFGL+R E + +
Sbjct: 121 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLPIKW 176
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+PE + R T SDVW F V ++E+++
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG G FG V+ G +R + L +K +++ E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK----------AKFLQEARILKQYSH 171
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS-----RVPTPLAWIARLKIAQD 209
PN+V+L+G C + +V EL+ L + RV T L++ D
Sbjct: 172 PNIVRLIGVCTQKQPI----YIVMELVQGGDFLTFLRTEGARLRVKT------LLQMVGD 221
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
AA G+ YL + I RD N L+ E K+SDFG++R+
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + GR +++SDVWSFG++L+E +
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVV 152
++GEG FG VY GV T+ K++VA+K + +KE +++E + +
Sbjct: 31 ILGEGFFGEVYEGV--------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HP++VKL+G E+ + L Y + H L R L + + + +
Sbjct: 83 DHPHIVKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICK 136
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
+AYL + RD NIL+ KL DFGL+R E + +
Sbjct: 137 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLPIKW 192
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+PE + R T SDVW F V ++E+++
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWINEVNFLGV 151
+IG G FG V G +++ ++ VAIK L + G+ + +++++E + +G
Sbjct: 14 VIGAGEFGEVCSGHLKLPGK--------REIFVAIKTL-KSGYTEKQRRDFLSEASIMGQ 64
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN++ L G + +++ E M N SL D L + I + + + A
Sbjct: 65 FDHPNVIHLEGVVT----KSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIA 119
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---QGPPEGLGHXXXXXXX 268
G+ YL D + R NIL++ + K+SDFGL+R +
Sbjct: 120 AGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE +Q + T+ SDVWS+G+V++E+++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVV 152
++GEG FG VY GV T+ K++VA+K + +KE +++E + +
Sbjct: 19 ILGEGFFGEVYEGV--------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
HP++VKL+G E+ + L Y + H L R L + + + +
Sbjct: 71 DHPHIVKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICK 124
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
+AYL + RD NIL+ KL DFGL+R E + +
Sbjct: 125 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLPIKW 180
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+PE + R T SDVW F V ++E+++
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NR 133
R+F EL+ + ++G G FG V++GV G K+ V IK + ++
Sbjct: 26 RIFKETELR-------KLKVLGSGVFGTVHKGV-------WIPEGESIKIPVCIKVIEDK 71
Query: 134 QGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
G Q + + + +G + H ++V+L+G C G LV + + SL DH+
Sbjct: 72 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQH 126
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ 253
L L A+G+ YL E ++ R+ N+LL + +++DFG+A
Sbjct: 127 RGA-LGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 254 GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
PP+ + A E + G+ T +SDVWS+GV ++EL+T
Sbjct: 183 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G + + DVA+K + ++G E+ E + + H
Sbjct: 16 LGSGQFGVVKLGKWK------------GQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSH 62
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLKIAQDA 210
P LVK G C+++ +V E + N L ++L S P+ L L++ D
Sbjct: 63 PKLVKFYGVCSKE----YPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDV 113
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
G+A+L Q I RD N L+D D K+SDFG+ R +
Sbjct: 114 CEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPV 169
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
++APE + ++KSDVW+FG++++E+ +
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAI +L + +KE ++E
Sbjct: 51 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 160
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 161 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 261
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++ G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLSSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++ G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 24 FKKIKVLSSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 133
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G G FG V +GV R+ ++DVAIK L +QG + +E + E + +
Sbjct: 344 LGCGNFGSVRQGVYRM---------RKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQL 393
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS-RVPTPLAWIARLKIAQDAA 211
+P +V+L+G C + +LV E+ L L+ R P++ +A L +
Sbjct: 394 DNPYIVRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQVS 446
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL E+ + R+ N+LL + AK+SDFGL++ G +
Sbjct: 447 MGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + +++SDVWS+GV ++E ++
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 21 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 130
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 131 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NR 133
R+F EL+ + ++G G FG V++GV G K+ V IK + ++
Sbjct: 8 RIFKETELR-------KLKVLGSGVFGTVHKGV-------WIPEGESIKIPVCIKVIEDK 53
Query: 134 QGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
G Q + + + +G + H ++V+L+G C G LV + + SL DH+
Sbjct: 54 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQH 108
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ 253
L L A+G+ YL E ++ R+ N+LL + +++DFG+A
Sbjct: 109 RGA-LGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 254 GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
PP+ + A E + G+ T +SDVWS+GV ++EL+T
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++ G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 24 FKKIKVLSSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 133
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFGLA+ E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 19 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 128
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 19 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 128
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 17 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 24 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 133
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR-QGFQGHKEWINEVN 147
F + ++G G FG VY+G+ G K+ VAIK+L + +KE ++E
Sbjct: 19 FKKIKVLGSGAFGTVYKGL-------WIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM--HNKSLEDHLLSRVPTPLAWIARLK 205
+ V +P++ +L+G C + + +L+ + + + + +D++ S+ L W ++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI- 128
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
A+G+ YL D +L+ RD N+L+ K++DFG A+ E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ A E + T +SDVWS+GV ++EL+T +P +E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 100/240 (41%), Gaps = 37/240 (15%)
Query: 70 RANDLRVFSFAEL---KSATRGFSRALLIGEGGFGCVYRGV-VRVSSDDHQTSGHDSKLD 125
RA L+ AEL + FS IG G FG VY VR S
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEV------------ 81
Query: 126 VAIKQLNRQGFQGHKEW---INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH 182
VAIK+++ G Q +++W I EV FL ++HPN ++ G R LV E
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REHTAWLVMEYCL 137
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYK 242
+ + LL PL + + A +GLAYLH +I RD K NILL E
Sbjct: 138 GSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGL 192
Query: 243 AKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYV---QTGRLTAKSDVWSFGVVLYEL 299
KL DFG A P + APE + G+ K DVWS G+ EL
Sbjct: 193 VKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 15 IGKGNFA-------KVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 64
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI----ARLKIAQD 209
HPN+VKL E E LV E + D+L++ W+ AR K Q
Sbjct: 65 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQI 115
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ + Y H++ ++ RD K N+LLD D K++DFG + + G+
Sbjct: 116 VS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGS 168
Query: 270 XXYAAPEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
YAAPE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 74 LRVFSFAELKSATRGFSRALLI-----GEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAI 128
L V +F L+ F R L+ GEG FG V V + G VA+
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKV------VKATAFHLKGRAGYTTVAV 58
Query: 129 KQLNRQGFQGH-KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE 187
K L ++ ++E N L V HP+++KL G C++D LL+ E SL
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLR 114
Query: 188 DHLL-SRVPTP---------------------LAWIARLKIAQDAARGLAYLHEEMDFQL 225
L SR P L + A ++G+ YL E +L
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 226 IFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTA 285
+ RD NIL+ E K K+SDFGL+R E + A E + T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 286 KSDVWSFGVVLYELIT 301
+SDVWSFGV+L+E++T
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 105/256 (41%), Gaps = 41/256 (16%)
Query: 74 LRVFSFAELKSATRGFSRALLI-----GEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAI 128
L V +F L+ F R L+ GEG FG V V + G VA+
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKV------VKATAFHLKGRAGYTTVAV 58
Query: 129 KQLNRQGFQGH-KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE 187
K L ++ ++E N L V HP+++KL G C++D LL+ E SL
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLR 114
Query: 188 DHLL-SRVPTP---------------------LAWIARLKIAQDAARGLAYLHEEMDFQL 225
L SR P L + A ++G+ YL E L
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSL 171
Query: 226 IFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTA 285
+ RD NIL+ E K K+SDFGL+R E + A E + T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 286 KSDVWSFGVVLYELIT 301
+SDVWSFGV+L+E++T
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 92/218 (42%), Gaps = 34/218 (15%)
Query: 89 FSRALLIGEGGFGCVYRGV-VRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW---IN 144
FS IG G FG VY VR S VAIK+++ G Q +++W I
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEV------------VAIKKMSYSGKQSNEKWQDIIK 64
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV FL ++HPN ++ G R LV E + + LL PL +
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIA 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
+ A +GLAYLH +I RD K NILL E KL DFG A P
Sbjct: 119 AVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------ 169
Query: 265 XXXXXXXYAAPEYV---QTGRLTAKSDVWSFGVVLYEL 299
+ APE + G+ K DVWS G+ EL
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 74 LRVFSFAELKSATRGFSRALLI-----GEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAI 128
L V +F L+ F R L+ GEG FG V V + G VA+
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKV------VKATAFHLKGRAGYTTVAV 58
Query: 129 KQLNRQGFQGH-KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE 187
K L ++ ++E N L V HP+++KL G C++D LL+ E SL
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLR 114
Query: 188 DHLL-SRVPTP---------------------LAWIARLKIAQDAARGLAYLHEEMDFQL 225
L SR P L + A ++G+ YL E +L
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 226 IFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTA 285
+ RD NIL+ E K K+SDFGL+R E + A E + T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 286 KSDVWSFGVVLYELIT 301
+SDVWSFGV+L+E++T
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 92 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 265 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 378 NIISEISSQDEVTL 391
I++ S+Q+ + L
Sbjct: 308 RIVALTSNQEYLDL 321
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ 134
++ S + + ++R IG+G G VY + + + VAI+Q+N Q
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQE-----------VAIRQMNLQ 56
Query: 135 GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
+ INE+ + K+PN+V + DE +V E + SL D +++
Sbjct: 57 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL----WVVMEYLAGGSLTD-VVTET 111
Query: 195 PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG 254
IA + ++ + L +LH Q+I RD K+ NILL D KL+DFG Q
Sbjct: 112 CMDEGQIA--AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
PE + APE V K D+WS G++ E+I G
Sbjct: 167 TPE--QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ 134
++ S + + ++R IG+G G VY + + + VAI+Q+N Q
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQE-----------VAIRQMNLQ 56
Query: 135 GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
+ INE+ + K+PN+V + DE +V E + SL D +++
Sbjct: 57 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL----WVVMEYLAGGSLTD-VVTET 111
Query: 195 PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG 254
IA + ++ + L +LH Q+I RD K+ NILL D KL+DFG Q
Sbjct: 112 CMDEGQIA--AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
PE + APE V K D+WS G++ E+I G
Sbjct: 167 TPE--QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 92 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 265 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 378 NIISEISSQDEVTL 391
I++ S+Q+ + L
Sbjct: 308 RIVALTSNQEXLDL 321
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 21 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 77 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 250 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 293 RIVALTSNQE 302
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ 134
++ S + + ++R IG+G G VY + + + VAI+Q+N Q
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQE-----------VAIRQMNLQ 56
Query: 135 GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
+ INE+ + K+PN+V + DE +V E + SL D +++
Sbjct: 57 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL----WVVMEYLAGGSLTD-VVTET 111
Query: 195 PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG 254
IA + ++ + L +LH Q+I RD K+ NILL D KL+DFG Q
Sbjct: 112 CMDEGQIA--AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
PE + APE V K D+WS G++ E+I G
Sbjct: 167 TPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 75 RVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ 134
++ S + + ++R IG+G G VY + + + VAI+Q+N Q
Sbjct: 9 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQE-----------VAIRQMNLQ 57
Query: 135 GFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
+ INE+ + K+PN+V + DE +V E + SL D +++
Sbjct: 58 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL----WVVMEYLAGGSLTD-VVTET 112
Query: 195 PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG 254
IA + ++ + L +LH Q+I RD K+ NILL D KL+DFG Q
Sbjct: 113 CMDEGQIA--AVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 167
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
PE + APE V K D+WS G++ E+I G
Sbjct: 168 TPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 126 VAIKQLNRQGFQGHKEWI-NEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMH 182
VAIK + ++ +G + + NE+ L +KHPN+V L DD E G L+ +L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVS 99
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAAR-------GLAYLHEEMDFQLIFRDFKTSNI 235
L D ++ + +DA+R + YLH D ++ RD K N+
Sbjct: 100 GGELFDRIVEK---------GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 236 L---LDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSF 292
L LDED K +SDFGL++ P G Y APE + + D WS
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 293 GVVLYELITGRRAVERNLPRNEQKLLEWV--------RPY---VSDSKK 330
GV+ Y L+ G N+ KL E + PY +SDS K
Sbjct: 205 GVIAYILLCGYPPF---YDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG V++G+ D++T VAIK ++ + + E I E+
Sbjct: 29 FTKLEKIGKGSFGEVFKGI------DNRTQKV-----VAIKIIDLEEAEDEIEDIQQEIT 77
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L P + K G +D + ++ E + S D L P PL I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKD----TKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 130
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E + KL+DFG+A Q +
Sbjct: 131 REILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFV 185
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ +K+D+WS G+ EL G P L+ P
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP---- 241
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P LEGNY CL K+P RP E++
Sbjct: 242 ---------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 50
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 106
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 107 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 158
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ + ++ VA+K + + G + ++ E N + ++H
Sbjct: 23 LGAGQFGEVW------------MATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LVKL ++ ++ E M SL D L S + + + A G+
Sbjct: 70 DKLVKLHAVVTKEP-----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ + I RD + +NIL+ K++DFGLAR + + A
Sbjct: 125 AFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTA 180
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GR------------RAVERN--LPRNE 314
PE + G T KSDVWSFG++L E++T GR RA+ER +PR E
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+ ++ VA+K + + G + ++ E N + ++H
Sbjct: 196 LGAGQFGEVWMAT------------YNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
LVKL ++ ++ E M SL D L S + + + A G+
Sbjct: 243 DKLVKLHAVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
A++ + I RD + +NIL+ K++DFGLAR + + A
Sbjct: 298 AFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKWTA 353
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELIT-GR------------RAVERN--LPRNE 314
PE + G T KSDVWSFG++L E++T GR RA+ER +PR E
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPE 408
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 29 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 85 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 141 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 258 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 301 RIVALTSNQE 310
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 158
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 25 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 81 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 137 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 254 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 297 RIVALTSNQE 306
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 60
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 61 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 117 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 166
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 92 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 265 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 308 RIVALTSNQE 317
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 49
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 105
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 106 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 158 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 60
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 61 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 117 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 166
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 110 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 159
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 36 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 92 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 265 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 308 RIVALTSNQE 317
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 126 VAIKQLNRQGFQGHKEWI-NEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMH 182
VAIK + ++ +G + + NE+ L +KHPN+V L DD E G L+ +L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVS 99
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAAR-------GLAYLHEEMDFQLIFRDFKTSNI 235
L D ++ + +DA+R + YLH D ++ RD K N+
Sbjct: 100 GGELFDRIVEK---------GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 236 L---LDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSF 292
L LDED K +SDFGL++ P G Y APE + + D WS
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 293 GVVLYELITGRRAVERNLPRNEQKLLEWV--------RPY---VSDSKK 330
GV+ Y L+ G N+ KL E + PY +SDS K
Sbjct: 205 GVIAYILLCGYPPF---YDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 110 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 159
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 110 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 159
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 158
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK---EWINEVNFLGV 151
+G G FG +V +HQ +GH VA+K LNRQ + + E+ L +
Sbjct: 19 LGVGTFG-------KVKIGEHQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+HP+++KL + + M V E + L D++ + + ++ Q
Sbjct: 68 FRHPHIIKLYQVISTPTDFFM----VMEYVSGGELFDYICKH--GRVEEMEARRLFQQIL 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
+ Y H M ++ RD K N+LLD AK++DFGL+ G
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRTSCGSPN 175
Query: 272 YAAPEYVQTGRLTA--KSDVWSFGVVLYELITG 302
YAAPE V +GRL A + D+WS GV+LY L+ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 49
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 105
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 106 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 158 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK---EWINEVNFLGV 151
+G G FG +V H+ +GH VA+K LNRQ + + E+ L +
Sbjct: 24 LGVGTFG-------KVKVGKHELTGHK----VAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+HP+++KL + + M V E + L D++ L ++ Q
Sbjct: 73 FRHPHIIKLYQVISTPSDIFM----VMEYVSGGELFDYICKN--GRLDEKESRRLFQQIL 126
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ Y H M ++ RD K N+LLD AK++DFGL+ G
Sbjct: 127 SGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM---MSDGEFLRXSCGSPN 180
Query: 272 YAAPEYVQTGRLTA--KSDVWSFGVVLYELITG 302
YAAPE + +GRL A + D+WS GV+LY L+ G
Sbjct: 181 YAAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 49
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 105
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 106 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 158 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 57
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 58 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 114 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 163
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 28 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 84 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 140 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 257 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 300 RIVALTSNQE 309
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 50
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 106
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 107 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 158
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 108
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 51
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 107
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 108 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 159
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG V++G+ D++T VAIK ++ + + E I E+
Sbjct: 9 FTKLEKIGKGSFGEVFKGI------DNRTQKV-----VAIKIIDLEEAEDEIEDIQQEIT 57
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L P + K G +D + ++ E + S D L P PL I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKD----TKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 110
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E + KL+DFG+A Q +
Sbjct: 111 REILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFV 165
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ +K+D+WS G+ EL G P L+ P
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP---- 221
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P LEGNY CL K+P RP E++
Sbjct: 222 ---------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 49
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 105
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 106 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 158 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 158
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 126 VAIKQLNRQGFQGHKEWI-NEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMH 182
VAIK + ++ +G + + NE+ L +KHPN+V L DD E G L+ +L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVS 99
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAAR-------GLAYLHEEMDFQLIFRDFKTSNI 235
L D ++ + +DA+R + YLH D ++ RD K N+
Sbjct: 100 GGELFDRIVEK---------GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 236 L---LDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSF 292
L LDED K +SDFGL++ P G Y APE + + D WS
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 293 GVVLYELITGRRAVERNLPRNEQKLLEWV--------RPY---VSDSKK 330
GV+ Y L+ G N+ KL E + PY +SDS K
Sbjct: 205 GVIAYILLCGYPPF---YDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 50
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 106
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 107 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV- 158
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 108
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG V++G+ D++T VAIK ++ + + E I E+
Sbjct: 24 FTKLEKIGKGSFGEVFKGI------DNRTQKV-----VAIKIIDLEEAEDEIEDIQQEIT 72
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L P + K G +D + ++ E + S D L P PL I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKD----TKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 125
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E + KL+DFG+A Q +
Sbjct: 126 REILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNXFV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ +K+D+WS G+ EL G P L+ P
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP---- 236
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P LEGNY CL K+P RP E++
Sbjct: 237 ---------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 126 VAIKQLNRQGFQGHKEWI-NEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMH 182
VAIK + ++ +G + + NE+ L +KHPN+V L DD E G L+ +L+
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVS 99
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAAR-------GLAYLHEEMDFQLIFRDFKTSNI 235
L D ++ + +DA+R + YLH D ++ RD K N+
Sbjct: 100 GGELFDRIVEK---------GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 236 L---LDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSF 292
L LDED K +SDFGL++ P G Y APE + + D WS
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 293 GVVLYELITGRRAVERNLPRNEQKLLEWV--------RPY---VSDSKK 330
GV+ Y L+ G N+ KL E + PY +SDS K
Sbjct: 205 GVIAYILLCGYPPF---YDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 51
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 107
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 108 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 159
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 158
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 51
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 107
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 108 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV- 159
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 53
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLI 109
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 110 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 161
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 162 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG V++G+ D++T VAIK ++ + + E I E+
Sbjct: 9 FTKLEKIGKGSFGEVFKGI------DNRTQKV-----VAIKIIDLEEAEDEIEDIQQEIT 57
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L P + K G +D + ++ E + S D L P PL I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKD----TKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 110
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E + KL+DFG+A Q +
Sbjct: 111 REILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNXFV 165
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ +K+D+WS G+ EL G P L+ P
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP---- 221
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P LEGNY CL K+P RP E++
Sbjct: 222 ---------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F + IGEG +G VY+ +++ + + +LD + + I E++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGE--VVALXKIRLDTETEGVPSTA-------IREISL 55
Query: 149 LGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIARLK 205
L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXX 264
+ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 112 LLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYT 161
Query: 265 XXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F + IGEG +G VY+ +++ + + +LD + + I E++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGE--VVALXKIRLDTETEGVPSTA-------IREISL 54
Query: 149 LGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIARLK 205
L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL +
Sbjct: 55 LKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXX 264
+ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 111 LLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYT 160
Query: 265 XXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 54
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 55 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 111 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 160
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV- 152
+GEG FG V + D +K VA+K L + + I+E+ + ++
Sbjct: 77 LGEGAFGQVV--LAEAIGLDKDKPNRVTK--VAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR--------- 203
KH N++ L+G C +D ++ E +L ++L +R P L +
Sbjct: 133 KHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 204 -----LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A ARG+ YL + + I RD N+L+ ED K++DFGLAR
Sbjct: 189 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-KL 317
+ APE + T +SDVWSFGV+L+E+ T + +P E KL
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
Query: 318 LEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILG 377
L K+ H + P N C P RP ++V+ L
Sbjct: 306 L----------KEGHRMDKPSNCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 378 NIISEISSQD 387
I++ S+Q+
Sbjct: 349 RIVALTSNQE 358
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK---EWINEVNFLGV 151
+G G FG +V +HQ +GH VA+K LNRQ + + E+ L +
Sbjct: 19 LGVGTFG-------KVKIGEHQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+HP+++KL + + M V E + L D++ + + ++ Q
Sbjct: 68 FRHPHIIKLYQVISTPTDFFM----VMEYVSGGELFDYICKH--GRVEEMEARRLFQQIL 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
+ Y H M ++ RD K N+LLD AK++DFGL+ G
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRDSCGSPN 175
Query: 272 YAAPEYVQTGRLTA--KSDVWSFGVVLYELITG 302
YAAPE V +GRL A + D+WS GV+LY L+ G
Sbjct: 176 YAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 27/226 (11%)
Query: 84 SATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW- 142
S++ F + +G G + VY+G+ ++T+G + VA+K++ +G
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL-------NKTTG----VYVALKEVKLDSEEGTPSTA 50
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ + +KH N+V+L ++ + LV+E M N K ++ + P L
Sbjct: 51 IREISLMKELKHENIVRLYDVIHTEN----KLTLVFEFMDNDLKKYMDSRTVGNTPRGLE 106
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
+GLA+ HE +++ RD K N+L+++ + KL DFGLAR G P
Sbjct: 107 LNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV- 162
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
+ Y AP+ + R + S D+WS G +L E+ITG+
Sbjct: 163 --NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HPN+VKL E E LV E + D+L++ R+K + A+
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKF 119
Query: 213 -----GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
+ Y H++ ++ RD K N+LLD D K++DFG + + G+
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFC 173
Query: 268 XXXXYAAPEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
YAAPE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HPN+VKL E E LV E + D+L++ R+K + A+
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKF 119
Query: 213 -----GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
+ Y H++ ++ RD K N+LLD D K++DFG + + G+
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDAFC 173
Query: 268 XXXXYAAPEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
YAAPE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 16 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 62
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 63 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 112
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 113 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFP 168
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 228
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 229 LASEKVYTIM 238
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 42/233 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HPN+VKL E E LV E + D+L++ R+K + A+
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKF 119
Query: 213 -----GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
+ Y H++ ++ RD K N+LLD D K++DFG + + G+
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFC 173
Query: 268 XXXXYAAPEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
YAAPE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 87 RGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEV 146
+ ++R IG+G G VY + + + VAI+Q+N Q + INE+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQE-----------VAIRQMNLQQQPKKELIINEI 69
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI 206
+ K+PN+V + DE +V E + SL D +++ IA +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDEL----WVVMEYLAGGSLTD-VVTETCMDEGQIA--AV 122
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
++ + L +LH Q+I R+ K+ NILL D KL+DFG Q PE
Sbjct: 123 CRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTM 177
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE V K D+WS G++ E+I G
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 12 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 58
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 59 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 108
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 109 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFP 164
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 224
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 225 LASEKVYTIM 234
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 35/230 (15%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 49
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL----LSRVPTPL 198
I E++ L + HPN+VKL+ ++ + LV+E +H + L+D + L+ +P PL
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLH-QDLKDFMDASALTGIPLPL 104
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPE 257
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 105 IKSYLFQLLQ----GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 157
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 158 ---RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 17 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 63
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 64 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 113
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 114 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFP 169
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 229
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 230 LASEKVYTIM 239
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 53
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K ++ L+ +P PL
Sbjct: 54 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GL++ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 110 FQLLQ----GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 159
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 23 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 69
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 70 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 119
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 120 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFP 175
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 235
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 236 LASEKVYTIM 245
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 17 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 63
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 64 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 113
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 114 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSRGSKFP 169
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 229
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 230 LASEKVYTIM 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E LV E + D+L++ AR K Q +
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-ARAKFRQIVS-A 125
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ ++ RD K N+LLD D K++DFG + + G+ YA
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGSPPYA 179
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 32 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 78
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 79 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 128
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 129 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFP 184
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 244
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 245 LASEKVYTIM 254
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E LV E + D+L++ AR K Q +
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-ARAKFRQIVS-A 125
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ ++ RD K N+LLD D K++DFG + + G+ YA
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDEFCGSPPYA 179
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V G R + DVAIK + ++G E+I E + + H
Sbjct: 32 LGTGQFGVVKYGKWR------------GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSH 78
Query: 155 PNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLLS---RVPTPLAWIARLKIAQD 209
LV+L G C + QR ++ E M N L ++L R T L++ +D
Sbjct: 79 EKLVQLYGVCTK------QRPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKD 128
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
+ YL + Q + RD N L+++ K+SDFGL+R +
Sbjct: 129 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFP 184
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT-GRRAVER----NLPRNEQKLLEWVRPY 324
++ PE + + ++KSD+W+FGV+++E+ + G+ ER + + L RP+
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 244
Query: 325 VSDSKKFHLI 334
++ K + ++
Sbjct: 245 LASEKVYTIM 254
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW 142
K + + F +G G FG V+ R + + ++ V +KQ+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLL--SRVPTPLAW 200
+E L +V HP ++++ G + Q ++ + + L L R P P+A
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQD----AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK 109
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
A + L YLH + +I+RD K NILLD++ K++DFG A+ P
Sbjct: 110 FY----AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP----- 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAV-ERNLPRNEQKLL 318
Y APE V T D WSFG+++YE++ G + N + +K+L
Sbjct: 158 DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN--KSLED-HLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E +H K+ D L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKTFMDASALTGIPLPLI 108
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 54/314 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 36 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VP--TP-------LA 199
H N+V L+G C + G +++ E +L +L S+ VP TP L
Sbjct: 90 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ + A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 260 GHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---K 316
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 317 LLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
L E R P + + + ++D C +P RP SE+V
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELV 302
Query: 374 DILGNIISEISSQD 387
+ LGN++ + QD
Sbjct: 303 EHLGNLLQANAQQD 316
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + ++
Sbjct: 23 IGKGNFA-------KVKLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E LV E + D+L++ AR K Q +
Sbjct: 73 HPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-ARAKFRQIVS-A 126
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ ++ RD K N+LLD D K++DFG + + +G+ YA
Sbjct: 127 VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT---VGNKLDTFCGSPPYA 180
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIITLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV V+
Sbjct: 22 IGKGNFA-------KVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E LV E + D+L++ AR K Q +
Sbjct: 72 HPNIVKLF----EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-ARAKFRQIVS-A 125
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ ++ RD K N+LLD D K++DFG + + G+ YA
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT---FGNKLDAFCGAPPYA 179
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 131/311 (42%), Gaps = 47/311 (15%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 85 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ-K 316
+ APE + T +SDVWSFGV+++E+ T + +P E K
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257
Query: 317 LLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
LL K+ H + P N C P RP ++V+ L
Sbjct: 258 LL----------KEGHRMDKPANCTN-------ELYMMMRDCWHAVPSQRPTFKQLVEDL 300
Query: 377 GNIISEISSQD 387
I++ ++Q+
Sbjct: 301 DRILTLTTNQE 311
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 144 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + ++
Sbjct: 23 IGKGNFA-------KVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E L+ E + D+L++ AR K Q +
Sbjct: 73 HPNIVKLF----EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-ARSKFRQIVS-A 126
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ +++ RD K N+LLD D K++DFG + + +G YA
Sbjct: 127 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDAFCGAPPYA 180
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 65 LLSQRRANDLRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKL 124
L++Q + L+ S SA R +GE FG VY+G + + QT
Sbjct: 11 LINQHKQAKLKEISL----SAVRFMEE---LGEDRFGKVYKGHLFGPAPGEQTQA----- 58
Query: 125 DVAIKQLNRQGFQG--HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH 182
VAIK L + +G +E+ +E ++HPN+V L+G +D M ++
Sbjct: 59 -VAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM----IFSYCS 112
Query: 183 NKSLEDHLLSRVP--------------TPLAWIARLKIAQDAARGLAYLHEEMDFQLIFR 228
+ L + L+ R P + L + + A G+ YL ++ +
Sbjct: 113 HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHK 169
Query: 229 DFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSD 288
D T N+L+ + K+SD GL R+ + APE + G+ + SD
Sbjct: 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 229
Query: 289 VWSFGVVLYELIT 301
+WS+GVVL+E+ +
Sbjct: 230 IWSYGVVLWEVFS 242
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIIHLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 30/227 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
IG+G F +V H +G + + + K QLN Q + EV + ++
Sbjct: 20 IGKGNFA-------KVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+VKL E E L+ E + D+L++ AR K Q +
Sbjct: 70 HPNIVKLF----EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE-ARSKFRQIVS-A 123
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ Y H++ +++ RD K N+LLD D K++DFG + + +G YA
Sbjct: 124 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDTFCGSPPYA 177
Query: 274 APEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
APE Q + + DVWS GV+LY L++G +LP + Q L E
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 53/313 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 37 LGRGAFGQV------IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTP--------LAW 200
H N+V L+G C + G +++ E +L +L S+ VP L
Sbjct: 91 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ + A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 148 EHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KL 317
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 318 LEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVD 374
E R P + + + ++D C +P RP SE+V+
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVE 303
Query: 375 ILGNIISEISSQD 387
LGN++ + QD
Sbjct: 304 HLGNLLQANAQQD 316
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
+GE FG VY+G + + QT VAIK L + +G +E+ +E +
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQA------VAIKTLKDKA-EGPLREEFRHEAMLRARL 69
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVP--------------TPL 198
+HPN+V L+G +D M ++ + L + L+ R P + L
Sbjct: 70 QHPNVVCLLGVVTKDQPLSM----IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ + A G+ YL ++ +D T N+L+ + K+SD GL R+
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + G+ + SD+WS+GVVL+E+ +
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 90 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 87 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 80 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 292
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 293 VEHLGNLLQANAQQD 307
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ +++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEV 146
F + IGEG +G VY+ +++ + VA+K+ L+ + I E+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTAIREI 52
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN--KSLED-HLLSRVPTPLAWIAR 203
+ L + HPN+VKL+ ++ + LV+E +H K+ D L+ +P PL
Sbjct: 53 SLLKELNHPNIVKLLDVIHTEN----KLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHX 262
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 FQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RT 158
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ E +L ++L +R P + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 80 HHLNVVNLLGACTKP---GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 292
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 293 VEHLGNLLQANAQQD 307
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 50
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH---NKSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E + K ++ L+ +P PL
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKKFMDASALTGIPLPLI 106
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 107 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV- 158
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 159 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 35 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 89 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 301
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 302 VEHLGNLLQANAQQD 316
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH---NKSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E + K ++ L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKKFMDASALTGIPLPLI 108
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV- 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKEAKRIPEEI 115
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA RGLAYL E+ Q++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 116 LGKVSIA--VLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 167
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y APE +Q + +SD+WS G+ L EL GR + P + K LE
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI----PPPDAKELEA 223
Query: 321 V--RPYV 325
+ RP V
Sbjct: 224 IFGRPVV 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK N ++++ E +
Sbjct: 18 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 70 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 123
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 35 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 89 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 301
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 302 VEHLGNLLQANAQQD 316
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK N ++++ E +
Sbjct: 15 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 67 HPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 120
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 121 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 176
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK +E ++ E +
Sbjct: 20 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 72 HPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 125
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 126 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 181
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 182 APESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK +E ++ E +
Sbjct: 46 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 98 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 151
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 152 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 207
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 208 APESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D + ++ Y N L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDGP--LYVIVAYASKGN--LREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK N ++++ E +
Sbjct: 23 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 75 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 128
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 129 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 184
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + L VAIK N ++++ E +
Sbjct: 21 IGEGQFGDVHQGIY--------MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 73 HPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 126
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 127 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 182
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 183 APESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 32/232 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN--RQGFQGHKEWINEV 146
+ R IGEG FG + ++ S++D + IK++N R + +E EV
Sbjct: 26 YVRLQKIGEGSFG---KAILVKSTEDGR--------QYVIKEINISRMSSKEREESRREV 74
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLV-----YELMHNKSLEDHLLSRVPTPLAWI 201
L +KHPN+V+ Y +E G +++ +L + + +L + L W
Sbjct: 75 AVLANMKHPNIVQ---YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
++ +A L ++H D +++ RD K+ NI L +D +L DFG+AR
Sbjct: 132 VQICLA------LKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVE 180
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRN 313
Y +PE + KSD+W+ G VLYEL T + A E +N
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 80 HHLNVVNLLGACTKP---GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 292
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 293 VEHLGNLLQANAQQD 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 80 HHLNVVNLLGACTKP---GGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 292
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 293 VEHLGNLLQANAQQD 307
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 35/230 (15%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL----LSRVPTPL 198
I E++ L + HPN+VKL+ ++ + LV+E + + L+D + L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPL 107
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPE 257
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 108 IKSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 ---RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG VY+G+ D+H +K VAIK ++ + + E I E+
Sbjct: 21 FTKLDRIGKGSFGEVYKGI-----DNH------TKEVVAIKIIDLEEAEDEIEDIQQEIT 69
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L P + + G + + ++ E + S D L P PL I
Sbjct: 70 VLSQCDSPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATIL 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E KL+DFG+A Q +
Sbjct: 123 REILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNXFV 177
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE ++ K+D+WS G+ EL G P L+ P
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP---- 233
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P LEG + CL K P+ RP E++
Sbjct: 234 ---------PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVVK 153
+G GGFG V R + HQ +G VAIKQ ++ ++E W E+ + +
Sbjct: 23 LGTGGFGYVLRWI-------HQDTGEQ----VAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYEL--MHNKSLEDHLLSRVPTPLAWIARLK------ 205
HPN+V A + G+Q+L +L + + E L + LK
Sbjct: 72 HPNVVS-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 126
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHX 262
+ D + L YLHE ++I RD K NI+L + K+ D G A++ G
Sbjct: 127 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGEL 180
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
Y APE ++ + T D WSFG + +E ITG R
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 35/230 (15%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 51
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL----LSRVPTPL 198
I E++ L + HPN+VKL+ ++ + LV+E + + L+D + L+ +P PL
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPL 106
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPE 257
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 107 IKSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 160 ---RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 35 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 89 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 301
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 302 VEHLGNLLQANAQQD 316
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVVK 153
+G GGFG V R + HQ +G VAIKQ ++ ++E W E+ + +
Sbjct: 22 LGTGGFGYVLRWI-------HQDTGEQ----VAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYEL--MHNKSLEDHLLSRVPTPLAWIARLK------ 205
HPN+V A + G+Q+L +L + + E L + LK
Sbjct: 71 HPNVVS-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHX 262
+ D + L YLHE ++I RD K NI+L + K+ D G A++ G
Sbjct: 126 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGEL 179
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRR 304
Y APE ++ + T D WSFG + +E ITG R
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 72 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 125
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLK--- 205
H N+V L+G C + G +++ E +L +L S+ VP +A K
Sbjct: 126 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 206 -------IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 183 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 300 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 338
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 339 VEHLGNLLQANAQQD 353
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + + VAIK N ++++ E +
Sbjct: 18 IGEGQFGDVHQGIY--------MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 70 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 123
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 98 GGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINEVNFLGVVKH 154
G FGCV++ ++ +D VA+K ++Q +Q +E + +KH
Sbjct: 26 GRFGCVWKA--QLMNDF-----------VAVKIFPLQDKQSWQSEREIFSTPG----MKH 68
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
NL++ + ++ L+ SL D+L + T W +A+ +RGL
Sbjct: 69 ENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT---WNELCHVAETMSRGL 125
Query: 215 AYLHEEMDF--------QLIFRDFKTSNILLDEDYKAKLSDFGLA---RQGPPEGLGHXX 263
+YLHE++ + + RDFK+ N+LL D A L+DFGLA G P G H
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH-- 183
Query: 264 XXXXXXXXYAAPEYVQTG-----RLTAKSDVWSFGVVLYELITGRRAVE 307
Y APE ++ + D+++ G+VL+EL++ +A +
Sbjct: 184 -GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 95 IGEGGFG-CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVV 152
+GEG FG V V + D + + + VA+K L + + ++E+ + ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEA-----VTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 153 -KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---IARLKIAQ 208
KH N++ L+G C +D ++ +L ++L +R P + + I R+ Q
Sbjct: 98 GKHKNIINLLGACTQDG----PLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 209 -----------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
ARG+ YL + + I RD N+L+ E+ K++DFGLAR
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWSFGV+++E+ T
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 28/255 (10%)
Query: 55 DWSDSLAFYELLSQRRANDLRVFSFAELKSATRG-FSRALLIGEGGFGCVYRGVVRVSSD 113
D+ DS+ F L + + E + T+ F + ++G+GGFG V VR +
Sbjct: 160 DYLDSIYFNRFLQ---------WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGK 210
Query: 114 DHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQ 173
+ + K K G +NE L V +V L Y E +
Sbjct: 211 MYACKKLEKKRIKKRK--------GEAMALNEKQILEKVNSRFVVSL-AYAYETKD---A 258
Query: 174 RLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTS 233
LV LM+ L+ H+ + A + GL LH E ++++RD K
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPE 315
Query: 234 NILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFG 293
NILLD+ ++SD GLA P G Y APE V+ R T D W+ G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPE---GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 294 VVLYELITGRRAVER 308
+LYE+I G+ ++
Sbjct: 373 CLLYEMIAGQSPFQQ 387
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + + VAIK N ++++ E +
Sbjct: 18 IGEGQFGDVHQGIY--------MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R L + + A +
Sbjct: 70 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTA 123
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + +
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWM 179
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 28/255 (10%)
Query: 55 DWSDSLAFYELLSQRRANDLRVFSFAELKSATRG-FSRALLIGEGGFGCVYRGVVRVSSD 113
D+ DS+ F L + + E + T+ F + ++G+GGFG V VR +
Sbjct: 160 DYLDSIYFNRFLQ---------WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGK 210
Query: 114 DHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQ 173
+ + K K G +NE L V +V L Y E +
Sbjct: 211 MYACKKLEKKRIKKRK--------GEAMALNEKQILEKVNSRFVVSL-AYAYETKD---A 258
Query: 174 RLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTS 233
LV LM+ L+ H+ + A + GL LH E ++++RD K
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPE 315
Query: 234 NILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFG 293
NILLD+ ++SD GLA P G Y APE V+ R T D W+ G
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPE---GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 294 VVLYELITGRRAVER 308
+LYE+I G+ ++
Sbjct: 373 CLLYEMIAGQSPFQQ 387
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 94/223 (42%), Gaps = 51/223 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEG +G VY+ + H+ +G VAIKQ+ + +E I E++ +
Sbjct: 37 LGEGSYGSVYKAI-------HKETGQI----VAIKQVPVES--DLQEIIKEISIMQQCDS 83
Query: 155 PNLVKLVG-------------YCAEDDERGMQRLLVYELMHNKSL-EDHLLSRVPTPLAW 200
P++VK G YC + RL NK+L ED + +
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL------RNKTLTEDEIAT-------- 129
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
I Q +GL YLH + I RD K NILL+ + AKL+DFG+A G
Sbjct: 130 -----ILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXM 179
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE +Q +D+WS G+ E+ G+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 37 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VP---TP-------L 198
H N+V L+G C + G +++ E +L +L S+ VP P L
Sbjct: 91 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ + A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 148 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ--- 315
+ APE + T +SDVWSFGV+L+E+ + + + +E+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 264
Query: 316 KLLEWVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEV 372
+L E R P + + + ++D C +P RP SE+
Sbjct: 265 RLKEGTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSEL 303
Query: 373 VDILGNIISEISSQD 387
V+ LGN++ + QD
Sbjct: 304 VEHLGNLLQANAQQD 318
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + + VAIK N ++++ E +
Sbjct: 398 IGEGQFGDVHQGIY--------MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R L + + A +
Sbjct: 450 HPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTA 503
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ + KL DFGL+R + + +
Sbjct: 504 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 559
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEW 142
+ F + IGEG +G VY+ +++ + VA+K+ L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------VALKKIRLDTETEGVPSTA 52
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLA 199
I E++ L + HPN+VKL+ ++ + LV+E + K ++ L+ +P PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEHVDQDLKKFMDASALTGIPLPLI 108
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEG 258
++ Q GLA+ H +++ RD K N+L++ + KL+DFGLAR G P
Sbjct: 109 KSYLFQLLQ----GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y APE + + + + D+WS G + E++T RRA+
Sbjct: 161 --RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + + VAIK N ++++ E +
Sbjct: 18 IGEGQFGDVHQGIY--------MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R + L + + A +
Sbjct: 70 HPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTA 123
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ KL DFGL+R + + +
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V + R + G ++ VA+KQL G +++ E+ L +
Sbjct: 18 LGKGNFGSV--ELCR-----YDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
+VK G + ++ LV E + + L D L R L L + +G+
Sbjct: 71 DFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGM 127
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY-A 273
YL + + RD NIL++ + K++DFGLA+ P + + +
Sbjct: 128 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELIT 301
APE + + +SDVWSFGVVLYEL T
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 51/304 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 35 LGRGAFGQV------IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLKIAQ 208
H N+V L+G C + G +++ E +L +L S+ VP + L +
Sbjct: 89 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 209 ------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 146 LICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLE 319
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 262
Query: 320 WVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
R P + + + ++D C +P RP SE+V+ L
Sbjct: 263 GTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 301
Query: 377 GNII 380
GN++
Sbjct: 302 GNLL 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLG-VV 152
+G G FG V V + D+ L VA+K L KE ++E+ + +
Sbjct: 54 LGAGAFGKV------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--------PLAWIARL 204
+H N+V L+G C G L++ E L + L + PL L
Sbjct: 108 QHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
+ A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 164 HFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLG-VV 152
+G G FG V V + D+ L VA+K L KE ++E+ + +
Sbjct: 46 LGAGAFGKV------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 99
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--------PLAWIARL 204
+H N+V L+G C G L++ E L + L + PL L
Sbjct: 100 QHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
+ A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 156 HFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V + R + G ++ VA+KQL G +++ E+ L +
Sbjct: 19 LGKGNFGSV--ELCR-----YDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
+VK G + ++ LV E + + L D L R L L + +G+
Sbjct: 72 DFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGM 128
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY-A 273
YL + + RD NIL++ + K++DFGLA+ P + + +
Sbjct: 129 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELIT 301
APE + + +SDVWSFGVVLYEL T
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 124/304 (40%), Gaps = 51/304 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG-HKEWINEVNFL-GVV 152
+G G FG V + +D + VA+K L H+ ++E+ L +
Sbjct: 35 LGRGAFGQV------IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR----VPTPLAWIARLKIAQ 208
H N+V L+G C + G +++ E +L +L S+ VP + L +
Sbjct: 89 HHLNVVNLLGACTKP---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 209 ------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 146 LIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLE 319
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKE 262
Query: 320 WVR---PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDIL 376
R P + + + ++D C +P RP SE+V+ L
Sbjct: 263 GTRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHL 301
Query: 377 GNII 380
GN++
Sbjct: 302 GNLL 305
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIA 202
E+ L + HPN+VKLV DD +V+EL++ + + VPT PL+
Sbjct: 86 EIAILKKLDHPNVVKLVEVL--DDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQ 138
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
QD +G+ YLH + ++I RD K SN+L+ ED K++DFG++ + +G
Sbjct: 139 ARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDAL 193
Query: 263 XXXXXXXXXYAAPEYVQTGR--LTAKS-DVWSFGVVLYELITGR 303
+ APE + R + K+ DVW+ GV LY + G+
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V + R + G ++ VA+KQL G +++ E+ L +
Sbjct: 31 LGKGNFGSV--ELCR-----YDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
+VK G + ++ LV E + + L D L R L L + +G+
Sbjct: 84 DFIVKYRGVSYGPGRQSLR--LVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGM 140
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY-A 273
YL + + RD NIL++ + K++DFGLA+ P + + +
Sbjct: 141 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELIT 301
APE + + +SDVWSFGVVLYEL T
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVVK 153
IGEG FG V++G+ S + + VAIK N ++++ E +
Sbjct: 398 IGEGQFGDVHQGIY--------MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP++VKL+G E+ ++ EL L L R L + + A +
Sbjct: 450 HPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTA 503
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAYL + + + RD N+L+ KL DFGL+R + + +
Sbjct: 504 LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 559
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELI 300
APE + R T+ SDVW FGV ++E++
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 143 INEVNFL-GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI 201
+ EV+ L V HPN+++L + E LV++LM L D+L +V L+
Sbjct: 58 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEK 111
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
KI + + LH+ ++ RD K NILLD+D KL+DFG + Q P G
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GE 165
Query: 262 XXXXXXXXXXYAAPEYVQTGR------LTAKSDVWSFGVVLYELITG 302
Y APE ++ + D+WS GV++Y L+ G
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 95 IGEGGFGCVYRG----------VVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V V++V+ +++ H + + + +L G E N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--N 111
Query: 145 EVNFLGVVKH--PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE-DHLLSRVPTPLAWI 201
VN LG H P LV + YC D LL + ++ LE D + + L+
Sbjct: 112 IVNLLGACTHGGPVLV-ITEYCCYGD------LLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
L + A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 165 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN--EVNFLGV 151
++G+G FG V+ +V+ + SG D++ A+K L + + E + L
Sbjct: 31 VLGQGSFGKVF--LVK------KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLA----WIARLKIA 207
V HP +VKL Y + + + L+ + + L L V ++A L +A
Sbjct: 83 VNHPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
D L +I+RD K NILLDE+ KL+DFGL++ E + H
Sbjct: 139 LDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYS 185
Query: 268 X--XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V T +D WSFGV+++E++TG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 143 INEVNFL-GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI 201
+ EV+ L V HPN+++L + E LV++LM L D+L +V L+
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEK 124
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
KI + + LH+ ++ RD K NILLD+D KL+DFG + Q P G
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GE 178
Query: 262 XXXXXXXXXXYAAPEYVQTGR------LTAKSDVWSFGVVLYELITG 302
Y APE ++ + D+WS GV++Y L+ G
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 143 INEVNFL-GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI 201
+ EV+ L V HPN+++L + E LV++LM L D+L +V L+
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEK 124
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
KI + + LH+ ++ RD K NILLD+D KL+DFG + Q P G
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GE 178
Query: 262 XXXXXXXXXXYAAPEYVQTGR------LTAKSDVWSFGVVLYELITG 302
Y APE ++ + D+WS GV++Y L+ G
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V+ SD Q +K +R + ++ + EVN
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------ 85
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLA----WIARLKIAQD 209
HP +VKL Y + + + L+ + + L L V ++A L +A D
Sbjct: 86 HPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX- 268
L +I+RD K NILLDE+ KL+DFGL++ E + H
Sbjct: 142 HLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFC 188
Query: 269 -XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V T +D WSFGV+++E++TG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN--EVNFLGV 151
++G+G FG V+ +V+ + SG D++ A+K L + + E + L
Sbjct: 31 VLGQGSFGKVF--LVK------KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLA----WIARLKIA 207
V HP +VKL Y + + + L+ + + L L V ++A L +A
Sbjct: 83 VNHPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
D L +I+RD K NILLDE+ KL+DFGL++ E + H
Sbjct: 139 LDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYS 185
Query: 268 X--XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V T +D WSFGV+++E++TG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 95 IGEGGFGCVYRG----------VVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V V++V+ +++ H + + + +L G E N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--N 111
Query: 145 EVNFLGVVKH--PNLVKLVGYCAEDDERGMQRL-----LVYELMHNKSLEDHLLSRVPTP 197
VN LG H P LV + YC D R L Y + + E+ L SR
Sbjct: 112 IVNLLGACTHGGPVLV-ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR---- 166
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
L + A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 167 ----DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F+ ++G+G FG V ++ Q G K+ V + + + +E++ E
Sbjct: 25 FTLGRMLGKGEFGSVREAQLK------QEDGSFVKVAVKMLKADIIASSDIEEFLREAAC 78
Query: 149 LGVVKHPNLVKLVGYCAEDDERGMQR--LLVYELMHNKSLEDHLL-SRV---PTPLAWIA 202
+ HP++ KLVG +G +++ M + L LL SR+ P L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
++ D A G+ YL I RD N +L ED ++DFGL+R+
Sbjct: 139 LVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ A E + T SDVW+FGV ++E++T
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLG-VV 152
+G G FG V V + D+ L VA+K L KE ++E+ + +
Sbjct: 54 LGAGAFGKV------VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG 107
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRV--PTPLAWIAR----- 203
+H N+V L+G C G L++ E L + L SRV P IA
Sbjct: 108 QHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 204 ---LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
L + A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 164 RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG V + R + G ++ VA+KQL G +++ E+ L +
Sbjct: 15 LGKGNFGSVE--LCR-----YDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
+VK G ++ LV E + + L D L R L L + +G+
Sbjct: 68 DFIVKYRGVSYGPGRPELR--LVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGM 124
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY-A 273
YL + + RD NIL++ + K++DFGLA+ P + +
Sbjct: 125 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 274 APEYVQTGRLTAKSDVWSFGVVLYELIT 301
APE + + +SDVWSFGVVLYEL T
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 87
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL +C +DDE+ L + L + K+ E + ++ + R
Sbjct: 88 RDVMSRLDHPFFVKLY-FCFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 141
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 142 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 20 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 125
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 126 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVP 181
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 122 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVP 177
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 122 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHXVMQEHRKVP 177
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 95 IGEGGFG--CVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN---EVNFL 149
IG+G FG C+ +D+K A+K +N+Q E N E+ +
Sbjct: 23 IGKGSFGKVCI-------------VQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV----PTPLAWIARLK 205
++HP LV L Y +D+E +V +L+ L HL V T +I L
Sbjct: 70 QGLEHPFLVNL-WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+A D YL + ++I RD K NILLDE ++DF +A P E
Sbjct: 126 MALD------YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QITT 173
Query: 266 XXXXXXYAAPEYVQTGRLTAKS---DVWSFGVVLYELITGRR 304
Y APE + + S D WS GV YEL+ GRR
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 26 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 131
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 132 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHXVMQEHRKVP 187
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 46/222 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG---HKEWINEVNFLGV 151
+GEG FG V + + ++ VA+K ++RQ + H E+++L +
Sbjct: 17 LGEGSFGKV-----------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL 65
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
++HP+++KL + M ++ Y L D++ + + ++ +D
Sbjct: 66 LRHPHIIKLYDVITTPTDIVM--VIEYA---GGELFDYI----------VEKKRMTEDEG 110
Query: 212 R--------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
R + Y H +++ RD K N+LLD++ K++DFGL+ G+
Sbjct: 111 RRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFL 164
Query: 264 XXXXXXXXYAAPEYVQTGRLTA--KSDVWSFGVVLYELITGR 303
YAAPE + G+L A + DVWS G+VLY ++ GR
Sbjct: 165 KTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-RQGFQGHK-EW 142
AT + IG G +G VY+ + D H SGH VA+K + G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPH--SGHF----VALKSVRVPNGEEGLPIST 50
Query: 143 INEVNFL---GVVKHPNLVKLVGYCAED-DERGMQRLLVYELMHNKSLEDHLLSRVPTPL 198
+ EV L +HPN+V+L+ CA +R ++ LV+E + ++ L +L P L
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ + RGL +LH ++ RD K NIL+ KL+DFGLAR
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YS 163
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 164 YQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 68 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 122 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVP 177
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 178 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 20 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 72 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 125
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 126 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVP 181
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 182 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
A + L +LH D +I+RD K N+LLD + KL+DFG+ ++G G+
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATF 184
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWV 321
Y APE +Q D W+ GV+LYE++ G E NE L E +
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA---ENEDDLFEAI 236
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 23/212 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINEVNFLGV 151
+G+G FG V RG S + VA+K L + ++I EVN +
Sbjct: 26 LGDGSFGVVRRGEWDAPSG--------KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H NL++L G + +V EL SL D L L + A A
Sbjct: 78 LDHRNLIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVA 131
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
G+ YL + + I RD N+LL K+ DFGL R P+ H
Sbjct: 132 EGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR-ALPQNDDHYVMQEHRKVP 187
Query: 272 YA--APEYVQTGRLTAKSDVWSFGVVLYELIT 301
+A APE ++T + SD W FGV L+E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 26 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK------I 206
KH N++ L+ D R L E ++ L HL+ + A+L +
Sbjct: 75 KHENVIGLL------DVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 127 IYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----- 178
Query: 267 XXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQTG-RLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQL---NRQGFQGHKEWINEVNFL 149
+G GG VY D+ L+ VAIK + R+ + K + EV+
Sbjct: 19 LGGGGMSTVYLA-------------EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+ H N+V ++ EDD LV E + +L +++ S PL+ +
Sbjct: 66 SQLSHQNIVSMIDVDEEDD----CYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQ 119
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
G+ + H D +++ RD K NIL+D + K+ DFG+A+ L
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGT 175
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y +PE + +D++S G+VLYE++ G
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 35/218 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDV----AIKQLNRQGFQGHKEWINEVNFL 149
++G+G FG V+ V +V+ D SGH + V +K +R + ++ + +VN
Sbjct: 35 VLGQGSFGKVFL-VRKVTRPD---SGHLYAMKVLKKATLKVRDRVRTKMERDILADVN-- 88
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWI---ARLKI 206
HP +VKL Y + + + L+ + + L +R+ + + + +
Sbjct: 89 ----HPFVVKL-HYAFQTEGK---LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYL 136
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
A+ A GL +LH +I+RD K NILLDE+ KL+DFGL++ E + H
Sbjct: 137 AE-LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAY 188
Query: 267 XX--XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V + +D WS+GV+++E++TG
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 95 IGEGGFGCVYRG----------VVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V V++V+ +++ H + + + +L G E N
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--N 96
Query: 145 EVNFLGVVKH--PNLVKLVGYCAEDD-----ERGMQRLLVYELMHNKSLEDHLLSRVPTP 197
VN LG H P LV + YC D R + +L L + E L P
Sbjct: 97 IVNLLGACTHGGPVLV-ITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG-LDKEDGRP 154
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
L L + A+G+A+L + I RD N+LL + AK+ DFGLAR +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G++L+E+ +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-RQGFQGHK-EW 142
AT + IG G +G VY+ + D H SGH VA+K + G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPH--SGHF----VALKSVRVPNGEEGLPIST 50
Query: 143 INEVNFL---GVVKHPNLVKLVGYCAED-DERGMQRLLVYELMHNKSLEDHLLSRVPTPL 198
+ EV L +HPN+V+L+ CA +R ++ LV+E + ++ L +L P L
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ + RGL +LH ++ RD K NIL+ KL+DFGLAR
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YS 163
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 164 YQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLN-RQGFQGHK-EW 142
AT + IG G +G VY+ + D H SGH VA+K + G +G
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPH--SGHF----VALKSVRVPNGEEGLPIST 50
Query: 143 INEVNFL---GVVKHPNLVKLVGYCAED-DERGMQRLLVYELMHNKSLEDHLLSRVPTPL 198
+ EV L +HPN+V+L+ CA +R ++ LV+E + ++ L +L P L
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL 109
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ + RGL +LH ++ RD K NIL+ KL+DFGLAR
Sbjct: 110 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YS 163
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 164 YQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
IG G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 35 IGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 132
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 133 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 186 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKL-DVAIKQLNRQGFQGHKEWI 143
AT + IG G +G VY+ + D H SGH L V + G +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK-----ARDPH--SGHFVALKSVRVPNGGGGGGGLPISTV 59
Query: 144 NEVNFL---GVVKHPNLVKLVGYCAED-DERGMQRLLVYELMHNKSLEDHLLSRVPTPLA 199
EV L +HPN+V+L+ CA +R ++ LV+E + ++ L +L P L
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLP 118
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ + RGL +LH ++ RD K NIL+ KL+DFGLAR
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSY 172
Query: 260 GHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V SS D + S L +A+K+L+R Q K E+ L +
Sbjct: 59 VGSGAYGSV------CSSYDVK-----SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 156
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 157 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 211
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 212 -----VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELM---------HNKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEV 146
++ ++G+G FG V + R++ ++ A+K +N+ + + EV
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-----------AVKVINKASAKNKDTSTILREV 72
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI 206
L + HPN++KL E E +V EL L D ++ R AR I
Sbjct: 73 ELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--I 126
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXX 263
+ G+ Y+H+ ++ RD K NILL+ +D K+ DFGL+
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKM 180
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE ++ G K DVWS GV+LY L++G
Sbjct: 181 KDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEV 146
++ ++G+G FG V + R++ ++ A+K +N+ + + EV
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-----------AVKVINKASAKNKDTSTILREV 72
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI 206
L + HPN++KL E E +V EL L D ++ R AR I
Sbjct: 73 ELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--I 126
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXX 263
+ G+ Y+H+ ++ RD K NILL+ +D K+ DFGL+
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---KM 180
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V G K DVWS GV+LY L++G
Sbjct: 181 KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R IG G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTIGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E M + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYMPGGDMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ K++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEV 146
++ ++G+G FG V + R++ ++ A+K +N+ + + EV
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEY-----------AVKVINKASAKNKDTSTILREV 72
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI 206
L + HPN++KL E E +V EL L D ++ R AR I
Sbjct: 73 ELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--I 126
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXX 263
+ G+ Y+H+ ++ RD K NILL+ +D K+ DFGL+
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKM 180
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V G K DVWS GV+LY L++G
Sbjct: 181 KDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 37 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 134
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 135 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 188 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 64
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 65 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 117
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 118 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ APE + + ++KSDVWSFGV+++E + + R + +E
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELM---------HNKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 37 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 134
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 135 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 188 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 74
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 75 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 127
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 128 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 35 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 132
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 133 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 186 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R IG G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTIGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E M + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYMPGGDMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ K++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 81 ELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK 140
++KS + + + +GEG F VY+ + D T+ VAIK++ K
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYK------ARDKNTNQ-----IVAIKKIKLGHRSEAK 52
Query: 141 EWIN-----EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNK---SLEDHLLS 192
+ IN E+ L + HPN++ L+ LV++ M ++D+ L
Sbjct: 53 DGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS----LVFDFMETDLEVIIKDNSLV 108
Query: 193 RVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR 252
P+ + + + +GL YLH+ ++ RD K +N+LLDE+ KL+DFGLA+
Sbjct: 109 LTPSHIKAYMLMTL-----QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
Query: 253 Q--GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELI 300
P H Y APE + R+ D+W+ G +L EL+
Sbjct: 161 SFGSPNRAYXH----QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 105/248 (42%), Gaps = 29/248 (11%)
Query: 65 LLSQRRANDLRVFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKL 124
+ S A L + L+ F L+G G +G VY+G H +G +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-------RHVKTGQLA-- 52
Query: 125 DVAIKQLNRQGFQGHKEWINEVNFLGVVKHP-NLVKLVGYCAEDDERGM--QRLLVYELM 181
AIK ++ G + +E E+N L H N+ G + + GM Q LV E
Sbjct: 53 --AIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC 109
Query: 182 HNKSLEDHLLSRVPTPLA--WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE 239
S+ D + + L WIA I ++ RGL++LH+ ++I RD K N+LL E
Sbjct: 110 GAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTE 164
Query: 240 DYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQT-----GRLTAKSDVWSFGV 294
+ + KL DFG++ Q + + APE + KSD+WS G+
Sbjct: 165 NAEVKLVDFGVSAQ--LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222
Query: 295 VLYELITG 302
E+ G
Sbjct: 223 TAIEMAEG 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 62
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 63 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 115
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 116 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE 314
+ APE + + ++KSDVWSFGV+++E + + R + +E
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 37 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 134
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 135 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT 187
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 188 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 68
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 69 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 122 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 68
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 69 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 121
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 122 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 82
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 83 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 135
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 136 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 426
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 427 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 479
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 480 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 84
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 85 LDNPYIVRMIGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 137
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL E + RD N+LL + AK+SDFGL++ E
Sbjct: 138 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 84
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 85 LDNPYIVRMIGICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 137
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL E + RD N+LL + AK+SDFGL++ E
Sbjct: 138 MGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 119
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NI++ K+ DFG+AR G
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 35 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 132
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 133 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 186 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHD---SKLDVAIKQLNRQGFQGHKEWIN-EVNFL 149
+IG G V R V H+ +GH+ ++V ++L+ + + +E E + L
Sbjct: 101 VIGRGVSSVVRRCV-------HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 150 -GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
V HP+++ L+ + E LV++LM L D+L +V L+ I +
Sbjct: 154 RQVAGHPHIITLI----DSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMR 207
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
+++LH ++ RD K NILLD++ + +LSDFG + P G
Sbjct: 208 SLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---GEKLRELCG 261
Query: 269 XXXYAAPEYVQTGR------LTAKSDVWSFGVVLYELITG 302
Y APE ++ + D+W+ GV+L+ L+ G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 29 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 126
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 127 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 179
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 180 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSG---HDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV 151
+G G FG V +G ++ + + D A+K E + E N +
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD----------ELLAEANVMQQ 427
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ +P +V+++G C + +LV E+ L +L I +++ +
Sbjct: 428 LDNPYIVRMIGICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVS 480
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ YL EE +F + RD N+LL + AK+SDFGL++ E
Sbjct: 481 MGMKYL-EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + + ++KSDVWSFGV+++E +
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 26 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 123
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 124 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 177 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 41 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 138
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 139 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 191
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 192 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 27 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 124
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 125 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 178 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 37 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 134
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 135 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 187
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 188 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 35 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 132
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 133 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 186 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 32 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 129
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 130 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 182
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 183 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 119
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NIL+ K+ DFG+AR G
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 27 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 124
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 125 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 178 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 32 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 129
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 130 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 183 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 28 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 125
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 126 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 178
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 179 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 32 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 129
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 130 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 183 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 94/224 (41%), Gaps = 48/224 (21%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH---KEWINEVNFLGV 151
+G G +G V S+ D +T VAIK+L R FQ K E+ L
Sbjct: 33 VGSGAYGAV------CSAVDGRTGAK-----VAIKKLYRP-FQSELFAKRAYRELRLLKH 80
Query: 152 VKHPNLVKLVGYCAEDD--ERGMQRLLVYELM---------HNKSLEDHLLSRVPTPLAW 200
++H N++ L+ D+ + LV M H K ED + V L
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML-- 138
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+GL Y+H +I RD K N+ ++ED + K+ DFGLARQ E G
Sbjct: 139 -----------KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXG 184
Query: 261 HXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + R T D+WS G ++ E+ITG+
Sbjct: 185 X-----VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 36 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 133
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 134 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 186
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 187 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 32 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 129
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 130 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 183 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 42 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 139
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 140 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 193 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 36 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 133
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 134 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 187 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 42 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 139
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 140 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 193 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 53 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 150
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 151 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMX 203
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 204 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 50 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 147
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 148 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 200
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 201 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 41 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 138
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 139 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 191
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 192 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 26 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 123
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 124 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 179 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 30 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 127
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 128 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 183 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 53 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 150
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 151 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 203
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 204 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 36 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 133
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 134 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 187 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 40 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 137
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 138 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 192
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 193 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 49 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 146
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 147 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 199
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 200 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW---INE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 30 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 78
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 79 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 131
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+DE +++DFG A++ G
Sbjct: 132 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCG 187
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 188 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH E + +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEY 315
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 119
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NI++ K+ DFG+AR G
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH E + +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 263 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEY 318
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 136 FQGHKEWINE--VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
Q + W NE V L +KH N+++ +G + L+ SL D L +
Sbjct: 57 IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN 116
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDF-------QLIFRDFKTSNILLDEDYKAKLS 246
V ++W IA+ ARGLAYLHE++ + RD K+ N+LL + A ++
Sbjct: 117 V---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
Query: 247 DFGLA---RQGPPEGLGHXXXXXXXXXXYAAPEYVQTG-----RLTAKSDVWSFGVVLYE 298
DFGLA G G H Y APE ++ + D+++ G+VL+E
Sbjct: 174 DFGLALKFEAGKSAGDTH---GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230
Query: 299 LITGRRAVERNLPRNEQKL 317
L + R + P +E L
Sbjct: 231 LAS--RCTAADGPVDEYML 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 119
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NI++ K+ DFG+AR G
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NI++ K+ DFG+AR G
Sbjct: 137 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E + HP +V + + G +V E + +L D + P+ +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAI 119
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG-HXX 263
++ DA + L + H+ +I RD K +NI++ K+ DFG+AR G
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + + A+SDV+S G VLYE++TG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEVNFLGVV 152
+GEG +G VY+ + D Q VA+K+ L+ + I E++ L +
Sbjct: 29 VGEGTYGVVYK------AKDSQGR------IVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI-AQDAA 211
HPN+V L+ ER + LV+E M K L+ +L T L +++KI
Sbjct: 77 HHPNIVSLIDVI--HSERCLT--LVFEFM-EKDLKK-VLDENKTGLQ-DSQIKIYLYQLL 129
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXX 269
RG+A+ H+ +++ RD K N+L++ D KL+DFGLAR P H
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVT 182
Query: 270 XXYAAPEYVQ-TGRLTAKSDVWSFGVVLYELITGR 303
Y AP+ + + + + D+WS G + E+ITG+
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 50 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 147
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 148 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 202
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 203 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH E + +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 120 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 175
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP---RNEQKLLEWV 321
APE ++ D W GVV+YE++ GR LP ++ +KL E +
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELI 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH E + +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 121 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 176
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP---RNEQKLLEWV 321
APE ++ D W GVV+YE++ GR LP ++ +KL E +
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELI 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V + D + +G + + V K+ +Q + + EV L +
Sbjct: 39 VLGKGSFGEV------ILCKD-KITGQECAVKVISKRQVKQK-TDKESLLREVQLLKQLD 90
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN++KL + +++G LV E+ L D ++SR + + +I + G
Sbjct: 91 HPNIMKLYEFF---EDKGY-FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSG 144
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
+ Y+H+ +++ RD K N+LL+ +D ++ DFGL+
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTA 198
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V G K DVWS GV+LY L++G
Sbjct: 199 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G Y APE + D+WS G ++ EL+TGR
Sbjct: 181 G-----XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 49 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 146
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 147 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 201
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 202 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH E + +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEY 177
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLP---RNEQKLLEWV 321
APE ++ D W GVV+YE++ GR LP ++ +KL E +
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR------LPFYNQDHEKLFELI 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 36 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 133
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G+
Sbjct: 134 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 188
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 189 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQ--LNRQGFQGHKEWINEVNFLGVV 152
+GEG +G VY+ + D Q VA+K+ L+ + I E++ L +
Sbjct: 29 VGEGTYGVVYK------AKDSQGR------IVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKI-AQDAA 211
HPN+V L+ ER + LV+E M K L+ +L T L +++KI
Sbjct: 77 HHPNIVSLIDVI--HSERCLT--LVFEFM-EKDLKK-VLDENKTGLQ-DSQIKIYLYQLL 129
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXX 269
RG+A+ H+ +++ RD K N+L++ D KL+DFGLAR P H
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVT 182
Query: 270 XXYAAPEYVQ-TGRLTAKSDVWSFGVVLYELITGR 303
Y AP+ + + + + D+WS G + E+ITG+
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHK-EWINEVNFL--- 149
IGEG +G V++ + D + G VA+K++ Q G +G I EV L
Sbjct: 19 IGEGAYGKVFK------ARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 150 GVVKHPNLVKLVGYCA-EDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK-IA 207
+HPN+V+L C +R + LV+E H L +VP P +K +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFE--HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
RGL +LH +++ RD K NIL+ + KL+DFGLAR
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
Y APE + D+WS G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q KE +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKEIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFGLA++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGV-- 151
LIG G +G VY+G S D+ VA+K + F + +INE N V
Sbjct: 20 LIGRGRYGAVYKG----SLDERP---------VAVKVFS---FANRQNFINEKNIYRVPL 63
Query: 152 VKHPNLVK-LVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
++H N+ + +VG + M+ LLV E N SL +L W++ ++A
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSV 120
Query: 211 ARGLAYLHEEM------DFQLIFRDFKTSNILLDEDYKAKLSDFGLA------RQGPPEG 258
RGLAYLH E+ + RD + N+L+ D +SDFGL+ R P
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 259 LGHXXXXXXXXXXYAAPEYVQTG-------RLTAKSDVWSFGVVLYELI 300
+ Y APE ++ + D+++ G++ +E+
Sbjct: 181 EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 167
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 168 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 219
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 275
Query: 321 V 321
+
Sbjct: 276 M 276
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + +SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------NSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHK-EWINEVNFL--- 149
IGEG +G V++ + D + G VA+K++ Q G +G I EV L
Sbjct: 19 IGEGAYGKVFK------ARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 150 GVVKHPNLVKLVGYCA-EDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK-IA 207
+HPN+V+L C +R + LV+E H L +VP P +K +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFE--HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
RGL +LH +++ RD K NIL+ + KL+DFGLAR
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELM---------HNKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGL R E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQGHK-EWINEVNFL--- 149
IGEG +G V++ + D + G VA+K++ Q G +G I EV L
Sbjct: 19 IGEGAYGKVFK------ARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 150 GVVKHPNLVKLVGYCA-EDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK-IA 207
+HPN+V+L C +R + LV+E H L +VP P +K +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFE--HVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
RGL +LH +++ RD K NIL+ + KL+DFGLAR
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y APE + D+WS G + E+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R IG G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTIGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ K++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V +++ G + + V K+ +Q + + EV L +
Sbjct: 33 VLGKGSFGEVILCKDKIT-------GQECAVKVISKRQVKQK-TDKESLLREVQLLKQLD 84
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN++KL + +++G LV E+ L D ++SR + + +I + G
Sbjct: 85 HPNIMKLYEFF---EDKGY-FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSG 138
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
+ Y+H+ +++ RD K N+LL+ +D ++ DFGL+
Sbjct: 139 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTA 192
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + G K DVWS GV+LY L++G
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 58
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 59 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 112
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 113 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ D+GLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHK 140
K F ++GEG F V +S ++ AIK L ++ +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKV 53
Query: 141 EWIN-EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPL 198
++ E + + + HP VKL + +DDE+ L + L + K+ E + ++ +
Sbjct: 54 PYVTRERDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFD 107
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
R A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 108 ETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 57
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 58 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 111
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 112 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVN 147
F++ IG+G FG V++G+ D++T + VAIK ++ + + E I E+
Sbjct: 25 FTKLERIGKGSFGEVFKGI------DNRT-----QQVVAIKIIDLEEAEDEIEDIQQEIT 73
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
L + K G +G + ++ E + S D LL P IA +
Sbjct: 74 VLSQCDSSYVTKYYGSYL----KGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATM--L 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++ +GL YLH E + I RD K +N+LL E KL+DFG+A Q +
Sbjct: 127 KEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFV 181
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSD 327
+ APE +Q +K+D+WS G+ EL G P L+ P
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---- 237
Query: 328 SKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
P L G++ CL K P RP E++
Sbjct: 238 ---------PTLVGDFT----KSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 132
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 133 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 184
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 240
Query: 321 V 321
+
Sbjct: 241 M 241
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 106 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 321 V 321
+
Sbjct: 214 M 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHK 140
K F ++GEG F V +S ++ AIK L ++ +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKV 54
Query: 141 EWIN-EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPL 198
++ E + + + HP VKL + +DDE+ L + L + K+ E + ++ +
Sbjct: 55 PYVTRERDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFD 108
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
R A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 109 ETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 106 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 321 V 321
+
Sbjct: 214 M 214
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL Y +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 124
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 125 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 176
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAV 306
Y +PE +Q + +SD+WS G+ L E+ GR +
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
+ R +G+GGF Y + + D+K A K + + ++ E
Sbjct: 28 YMRGRFLGKGGFAKCY-----------EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 76
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ + +P++V G+ +DD +V E+ +SL + L R AR
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 131
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ Q +G+ YLH ++I RD K N+ L++D K+ DFGLA + E G
Sbjct: 132 MRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKD 185
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKL 317
Y APE + + + D+WS G +LY L+ G+ E + + +NE +
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 318 LEWVRPYVSDSKKFHLIIDPRL 339
+ P S + L DP L
Sbjct: 246 PRHINPVASALIRRMLHADPTL 267
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
+ R +G+GGF Y + + D+K A K + + ++ E
Sbjct: 44 YMRGRFLGKGGFAKCY-----------EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ + +P++V G+ +DD +V E+ +SL + L R AR
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ Q +G+ YLH ++I RD K N+ L++D K+ DFGLA + E G
Sbjct: 148 MRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKT 201
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKL 317
Y APE + + + D+WS G +LY L+ G+ E + + +NE +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 318 LEWVRPYVSDSKKFHLIIDPRL 339
+ P S + L DP L
Sbjct: 262 PRHINPVASALIRRMLHADPTL 283
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 106 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 321 V 321
+
Sbjct: 214 M 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 106 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
Y +PE +Q + +SD+WS G+ L E+ GR + P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 321 V 321
+
Sbjct: 214 M 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKL--DVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V S +D++L VA+K+L+R Q + E+ L
Sbjct: 36 VGSGAYGSV-------------CSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---NKSLEDHLLSRVPTPLAWIARLK 205
+KH N++ L V A E + LV LM N ++ LS
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF------- 135
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ RGL Y+H +I RD K SN+ ++ED + ++ DFGLARQ E G+
Sbjct: 136 LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 266 XXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+ G+
Sbjct: 189 -VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL Y +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL Y +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 30 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 127
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G
Sbjct: 128 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG- 181
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 182 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 17 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 63
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 64 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 118
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 119 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLS 168
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 94/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L++ Q K E+ L
Sbjct: 42 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 139
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E
Sbjct: 140 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 193 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 35/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY R SK +A+K QL + G + + EV
Sbjct: 20 LGKGKFGNVYLARER-----------QSKFILALKVLFKTQLEKAGVE--HQLRREVEIQ 66
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LSR +I L
Sbjct: 67 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--- 121
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + + K++DFG + P
Sbjct: 122 ---ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRTTLC 171
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE 307
Y PE ++ K D+WS GV+ YE + G E
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWI-NEVNFLGVVK 153
IG GGF +V H +G VAIK +++ I E+ L ++
Sbjct: 18 IGTGGFA-------KVKLACHILTGEM----VAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H ++ +L E + +V E L D+++S+ L+ + +
Sbjct: 67 HQHICQLYHVL----ETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSA 120
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+AY+H + RD K N+L DE +K KL DFGL + P + YA
Sbjct: 121 VAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYA 176
Query: 274 APEYVQ-TGRLTAKSDVWSFGVVLYELITG--------RRAVERNLPRNEQKLLEWVRPY 324
APE +Q L +++DVWS G++LY L+ G A+ + + R + + +W+ P
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS 236
Query: 325 VSDSKKFHLIIDPR 338
+ L +DP+
Sbjct: 237 SILLLQQMLQVDPK 250
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 33 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 79
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 80 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 134
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 135 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 184
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 64
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 65 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 119 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 26 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 123
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G
Sbjct: 124 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG- 177
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 178 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 80
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 81 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 135 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 30 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 127
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G
Sbjct: 128 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG- 181
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 182 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
+ R +G+GGF Y + + D+K A K + + ++ E
Sbjct: 44 YMRGRFLGKGGFAKCY-----------EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ + +P++V G+ +DD +V E+ +SL + L R AR
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ Q +G+ YLH ++I RD K N+ L++D K+ DFGLA + E G
Sbjct: 148 MRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKX 201
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKL 317
Y APE + + + D+WS G +LY L+ G+ E + + +NE +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 318 LEWVRPYVSDSKKFHLIIDPRL 339
+ P S + L DP L
Sbjct: 262 PRHINPVASALIRRMLHADPTL 283
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 21 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 67
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 68 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 123 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 172
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 105
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 106 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 157
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAV 306
Y +PE +Q + +SD+WS G+ L E+ GR +
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
+ R +G+GGF Y + + D+K A K + + ++ E
Sbjct: 44 YMRGRFLGKGGFAKCY-----------EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
+ + +P++V G+ +DD +V E+ +SL + L R AR
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ Q +G+ YLH ++I RD K N+ L++D K+ DFGLA + E G
Sbjct: 148 MRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKD 201
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKL 317
Y APE + + + D+WS G +LY L+ G+ E + + +NE +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 318 LEWVRPYVSDSKKFHLIIDPRL 339
+ P S + L DP L
Sbjct: 262 PRHINPVASALIRRMLHADPTL 283
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 79
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 133
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 134 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 58/281 (20%)
Query: 68 QRRANDLR-VFSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDV 126
+++A D++ +F F E T FS +L E G ++
Sbjct: 14 KKQAEDIKKIFEFKET-LGTGAFSEVVLAEEKATGKLF---------------------- 50
Query: 127 AIKQLNRQGFQGHKEWI-NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHNK 184
A+K + ++ +G + I NE+ L +KH N+V L ED L LV +L+
Sbjct: 51 AVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL-----EDIYESPNHLYLVMQLVSGG 105
Query: 185 SLEDHLLSR-VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---DED 240
L D ++ + T ++ DA + YLH ++ RD K N+L DE+
Sbjct: 106 ELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLHR---MGIVHRDLKPENLLYYSQDEE 159
Query: 241 YKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
K +SDFGL++ EG G Y APE + + D WS GV+ Y L+
Sbjct: 160 SKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 301 TGRRAVERNLPRNEQKLLEWV--------RPY---VSDSKK 330
G N+ KL E + PY +SDS K
Sbjct: 217 CGYPPF---YDENDSKLFEQILKAEYEFDSPYWDDISDSAK 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 42 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 88
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 89 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 143
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 144 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 193
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 90 SRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFL 149
S+ ++G G FG V H+ + L +A K + +G + +E NE++ +
Sbjct: 92 SKTEILGGGRFGQV-----------HKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVM 140
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+ H NL++L Y A + + + +LV E + L D ++ L + + +
Sbjct: 141 NQLDHANLIQL--YDAFESKNDI--VLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQ 195
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNIL-LDEDYKA-KLSDFGLARQGPPEGLGHXXXXXX 267
G+ ++H+ ++ D K NIL ++ D K K+ DFGLAR+ P
Sbjct: 196 ICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR---EKLKVNF 249
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V ++ +D+WS GV+ Y L++G
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 21 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 67
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 68 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 123 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 172
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+GG+G V++ V +V+ + +G + V K + + + E N L VK
Sbjct: 24 VLGKGGYGKVFQ-VRKVTGAN---TGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHN----KSLEDHLLSRVPTPLAWIARLKIAQD 209
HP +V L+ Y + G + L+ E + LE + T ++A + +A
Sbjct: 80 HPFIVDLI-YAFQT---GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA-- 133
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
L +LH++ +I+RD K NI+L+ KL+DFGL ++ +G
Sbjct: 134 ----LGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGT 184
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + D WS G ++Y+++TG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 80
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 81 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 135 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFAEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 83
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 84 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 137
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 138 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 79
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 80 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 133
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 134 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 80
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 81 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 135 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 44 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 26/262 (9%)
Query: 123 KLDVAIKQLNRQGFQ-GHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM 181
K VAIK++N + Q E + E+ + HPN+V DE LV +L+
Sbjct: 40 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL----WLVMKLL 95
Query: 182 HNKSLED---HLLSRVPTPLAWIARLKIA---QDAARGLAYLHEEMDFQLIFRDFKTSNI 235
S+ D H++++ + IA ++ GL YLH+ I RD K NI
Sbjct: 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNI 152
Query: 236 LLDEDYKAKLSDFGLA---RQGPPEGLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWS 291
LL ED +++DFG++ G + APE ++ R K+D+WS
Sbjct: 153 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 212
Query: 292 FGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXX 351
FG+ EL TG + P L P ++ + D + Y
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKY----GKSF 264
Query: 352 XXXXXXCLTKQPKSRPKMSEVV 373
CL K P+ RP +E++
Sbjct: 265 RKMISLCLQKDPEKRPTAAELL 286
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 50 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 147
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DFGLAR E G
Sbjct: 148 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG- 201
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 202 ----XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V +++ G + + V K+ +Q + + EV L +
Sbjct: 56 VLGKGSFGEVILCKDKIT-------GQECAVKVISKRQVKQK-TDKESLLREVQLLKQLD 107
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN++KL + +++G LV E+ L D ++SR + + +I + G
Sbjct: 108 HPNIMKLYEFF---EDKGY-FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSG 161
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
+ Y+H+ +++ RD K N+LL+ +D ++ DFGL+
Sbjct: 162 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTA 215
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + G K DVWS GV+LY L++G
Sbjct: 216 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+GG+G V++ V +V+ + +G + V K + + + E N L VK
Sbjct: 24 VLGKGGYGKVFQ-VRKVTGAN---TGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHN----KSLEDHLLSRVPTPLAWIARLKIAQD 209
HP +V L+ Y + G + L+ E + LE + T ++A + +A
Sbjct: 80 HPFIVDLI-YAFQT---GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA-- 133
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
L +LH++ +I+RD K NI+L+ KL+DFGL ++ +G
Sbjct: 134 ----LGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGT 184
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + D WS G ++Y+++TG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKL--DVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V S +D++L VA+K+L+R Q + E+ L
Sbjct: 28 VGSGAYGSV-------------CSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 74
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---NKSLEDHLLSRVPTPLAWIARLK 205
+KH N++ L V A E + LV LM N ++ LS
Sbjct: 75 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF------- 127
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ RGL Y+H +I RD K SN+ ++ED + ++ DFGLARQ E G+
Sbjct: 128 LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---- 180
Query: 266 XXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+ G+
Sbjct: 181 -VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 82
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 137 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 82
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 137 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTELC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 82
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 137 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 26/262 (9%)
Query: 123 KLDVAIKQLNRQGFQ-GHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM 181
K VAIK++N + Q E + E+ + HPN+V DE LV +L+
Sbjct: 35 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL----WLVMKLL 90
Query: 182 HNKSLED---HLLSRVPTPLAWIARLKIA---QDAARGLAYLHEEMDFQLIFRDFKTSNI 235
S+ D H++++ + IA ++ GL YLH+ I RD K NI
Sbjct: 91 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNI 147
Query: 236 LLDEDYKAKLSDFGLA---RQGPPEGLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWS 291
LL ED +++DFG++ G + APE ++ R K+D+WS
Sbjct: 148 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 207
Query: 292 FGVVLYELITGRRAVERNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXX 351
FG+ EL TG + P L P ++ + D + Y
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKY----GKSF 259
Query: 352 XXXXXXCLTKQPKSRPKMSEVV 373
CL K P+ RP +E++
Sbjct: 260 RKMISLCLQKDPEKRPTAAELL 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIAR 203
E + + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTR 133
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 134 FYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 264 XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 190 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V +++ G + + V K+ +Q + + EV L +
Sbjct: 57 VLGKGSFGEVILCKDKIT-------GQECAVKVISKRQVKQK-TDKESLLREVQLLKQLD 108
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN++KL + +++G LV E+ L D ++SR + + +I + G
Sbjct: 109 HPNIMKLYEFF---EDKGY-FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSG 162
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
+ Y+H+ +++ RD K N+LL+ +D ++ DFGL+
Sbjct: 163 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKDKIGTA 216
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + G K DVWS GV+LY L++G
Sbjct: 217 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 35/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY R SK +A+K QL + G + + EV
Sbjct: 20 LGKGKFGNVYLARER-----------QSKFILALKVLFKTQLEKAGVE--HQLRREVEIQ 66
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LSR +I L
Sbjct: 67 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--- 121
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + + K++DFG + P
Sbjct: 122 ---ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRDTLC 171
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE 307
Y PE ++ K D+WS GV+ YE + G E
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 64 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 112
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 113 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 165
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 166 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCG 221
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 222 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 85
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 86 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 139
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 140 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 83
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 84 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 137
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 138 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 21 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 67
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 68 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 123 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLC 172
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 76 VFSFAELKSATR-----GFSRALL-----IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD 125
V + + K+A R G R LL IGEG G+V ++ + H S
Sbjct: 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGS-----TGIVCLAREKH------SGRQ 72
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLV-GYCAEDDERGMQRLLVYELMHNK 184
VA+K ++ + Q + NEV + +H N+V++ Y G + ++ E +
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-----GEELWVLMEFLQGG 127
Query: 185 SLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAK 244
+L D ++S+V IA + + + LAYLH + +I RD K+ +ILL D + K
Sbjct: 128 ALTD-IVSQVRLNEEQIA--TVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVK 181
Query: 245 LSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
LSDFG Q + + APE + + D+WS G+++ E++ G
Sbjct: 182 LSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 38 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 86
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 87 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEPHA---R 139
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 140 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 195
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 196 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 82
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 137 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE L APE + + D W+ GV++YE+ G
Sbjct: 201 TPEAL--------------APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR---VPTPLAWIARLKIAQDA 210
HPN+VKL E + LV EL++ L + + + T ++I R ++
Sbjct: 65 HPNIVKL----HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS--- 117
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
++++H D ++ RD K N+L +++ + K+ DFG AR PP+
Sbjct: 118 --AVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
YAAPE + D+WS GV+LY +++G+
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 18 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 64
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 65 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 119
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 120 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLC 169
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 15 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 61
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 62 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 116
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 117 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 166
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 17 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 63
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 64 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 118
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 119 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDTLC 168
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 17 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 63
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 64 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 118
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 119 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLC 168
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 20 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 66
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 67 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 121
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 122 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 171
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF--QGHKEWIN-E 145
F ++GEG F V +S ++ AIK L ++ + ++ E
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-----------AIKILEKRHIIKENKVPYVTRE 82
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLED-HLLSRVPTPLAWIARL 204
+ + + HP VKL + +DDE+ L + L + K+ E + ++ + R
Sbjct: 83 RDVMSRLDHPFFVKLY-FTFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRF 136
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
A+ + L YLH + +I RD K NILL+ED +++DFG A+ PE
Sbjct: 137 YTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + SD+W+ G ++Y+L+ G
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 141 EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
+ I E+ L P +V G D E + E M SL+ L P
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEIS----ICMEHMDGGSLDQVLKKAGRIPEQI 108
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
+ ++ IA +GL YL E+ +++ RD K SNIL++ + KL DFG++ Q +
Sbjct: 109 LGKVSIA--VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----ID 160
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y +PE +Q + +SD+WS G+ L E+ GR
Sbjct: 161 EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G+V ++++ H VA+K+++ + Q + NEV + H
Sbjct: 53 IGEGS-----TGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFNEVVIMRDYHH 101
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V + DE +V E + +L D +++ IA + R L
Sbjct: 102 DNVVDMYSSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIA--TVCLSVLRAL 154
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+YLH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 155 SYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMA 209
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE + + D+WS G+++ E+I G
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q KE +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKEIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ +++DFGLA++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 35/232 (15%)
Query: 85 ATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGH 139
A F +G+G FG VY + SK +A+K QL + G +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE-- 78
Query: 140 KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--P 197
+ EV ++HPN+++L GY D + +L Y + E LS+
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 136
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
+I L A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 137 ATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 185
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 186 --SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 210 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLEWVR---PY 324
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E R P
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 326
Query: 325 VSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEIS 384
+ + + ++D C +P RP SE+V+ LGN++ +
Sbjct: 327 YTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 365
Query: 385 SQD 387
QD
Sbjct: 366 QQD 368
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 30/184 (16%)
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLEWVR---P 323
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E R P
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 323
Query: 324 YVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNIISEI 383
+ + + ++D C +P RP SE+V+ LGN++
Sbjct: 324 DYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQAN 362
Query: 384 SSQD 387
+ QD
Sbjct: 363 AQQD 366
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTXLC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNY 183
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 243
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 244 AASLIQKMLQTDP 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKL--DVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V S +D++L VA+K+L+R Q + E+ L
Sbjct: 36 VGSGAYGSV-------------CSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK 82
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---NKSLEDHLLSRVPTPLAWIARLK 205
+KH N++ L V A E + LV LM N ++ LS
Sbjct: 83 HLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF------- 135
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ RGL Y+H +I RD K SN+ ++ED + ++ DFGLARQ E G+
Sbjct: 136 LVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 266 XXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+ G+
Sbjct: 189 -VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 64 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 112
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 113 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEPHA---R 165
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 166 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 221
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 222 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
ARG+ +L + I RD NILL E+ K+ DFGLAR
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNE---QKLLEWVR---PY 324
+ APE + + KSDVWS+GV+L+E+ + + + +E +L E +R P
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPE 325
Query: 325 VSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
S + + +++D C + PK RP+ +E+V+ LG+++
Sbjct: 326 YSTPEIYQIMLD---------------------CWHRDPKERPRFAELVEKLGDLL 360
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNY 187
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 247
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 248 AASLIQKMLQTDP 260
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 111/261 (42%), Gaps = 51/261 (19%)
Query: 57 SDSLAFYELLSQRRANDLRVF-SFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDH 115
S+S E L++ + + L+ + S A+ + F R +G G FG RV H
Sbjct: 3 SNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFG-------RVMLVKH 55
Query: 116 QTSGHDSKLDVAIKQLNRQGFQGHKE---WINEVNFLGVVKHPNLVKLVGYCAEDDERGM 172
+ +G+ A+K L++Q K+ +NE L V P LVKL + +D+
Sbjct: 56 KETGNH----YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-EFSFKDNS--- 107
Query: 173 QRLLVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDF 230
+V E + + HL + R P A R AQ YLH LI+RD
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---RFYAAQ-IVLTFEYLH---SLDLIYRDL 160
Query: 231 KTSNILLDEDYKAKLSDFGLARQ---------GPPEGLGHXXXXXXXXXXYAAPEYVQTG 281
K N+L+D+ +++DFG A++ G PE Y APE + +
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--------------YLAPEIILSK 206
Query: 282 RLTAKSDVWSFGVVLYELITG 302
D W+ GV++YE+ G
Sbjct: 207 GYNKAVDWWALGVLIYEMAAG 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 97 EGGFGCVYRGVVRVSSDDH-------QTSGHDSKLDVAIKQLNRQGF------------- 136
EG G Y V ++ S + + +GH K AIK + + F
Sbjct: 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK---AIKVIKKSQFDKGRYSDDNKNIE 87
Query: 137 QGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT 196
+ H+E NE++ L + HPN++KL + +D++ LV E L + +++R
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKL--FDVFEDKKYF--YLVTEFYEGGELFEQIINRHKF 143
Query: 197 PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDED---YKAKLSDFGLARQ 253
A I + G+ YLH+ ++ RD K NILL+ K+ DFGL+
Sbjct: 144 DECDAAN--IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 254 GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + Y APE ++ + K DVWS GV++Y L+ G
Sbjct: 199 FSKD---YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCGTPNY 183
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 243
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 244 AASLIQKMLQTDP 256
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 16 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 62
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 63 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 117
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 118 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLC 167
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 70 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLM 115
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 170
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 171 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 224
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNY 207
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 267
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 268 AASLIQKMLQTDP 280
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
A + GL +LH + +++RD K NILLD+D K++DFG+ ++ LG
Sbjct: 124 AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN---MLGDAKTNX 177
Query: 267 XX-XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
Y APE + + D WSFGV+LYE++ G+ ++E++L +R
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG---QDEEELFHSIR 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 25/227 (11%)
Query: 80 AELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH 139
A K F L+G+G FG V +VR + A+K L ++
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVI--LVREKATGRY---------YAMKILRKEVIIAK 49
Query: 140 KE---WINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT 196
E + E L +HP L L Y + +R V E + L HL SR
Sbjct: 50 DEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERV 104
Query: 197 PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPP 256
AR A+ + L YLH +++RD K N++LD+D K++DFGL ++G
Sbjct: 105 FTEERARFYGAEIVS-ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 160
Query: 257 EGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+G Y APE ++ D W GVV+YE++ GR
Sbjct: 161 DGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNY 205
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 265
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 266 AASLIQKMLQTDP 278
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 26/212 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHK-EWINEVNFLGVVK 153
+GEG + VY+G +++ + VA+K++ + +G I EV+ L +K
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-----------VALKEIRLEHEEGAPCTAIREVSLLKDLK 58
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+V L + E+ + LV+E + +K L+ +L +L + Q RG
Sbjct: 59 HANIVTL--HDIIHTEKSLT--LVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ-LLRG 112
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
LAY H + +++ RD K N+L++E + KL+DFGLAR + + +
Sbjct: 113 LAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEVVTLWY 166
Query: 274 APEYVQTGR--LTAKSDVWSFGVVLYELITGR 303
P + G + + D+W G + YE+ TGR
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH + +I RD K NILL+ED +++DFG A+ PE Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+PE + + SD+W+ G ++Y+L+ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F LIG GGFG V++ R+ + IK++ + +E V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTY-----------VIKRVKYNNEKAERE----VKA 57
Query: 149 LGVVKHPNLVKLVG------YCAEDDERGMQR------LLVYELMHNKSLEDHLLSRVPT 196
L + H N+V G Y E + R + E +LE + R
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 197 PLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPP 256
L + L++ + +G+ Y+H + +LI RD K SNI L + + K+ DFGL
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 174
Query: 257 EGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
+G Y +PE + + + D+++ G++L EL+
Sbjct: 175 DG---KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
A + GL +LH + +++RD K NILLD+D K++DFG+ ++ LG
Sbjct: 125 AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN---MLGDAKTNE 178
Query: 267 XX-XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
Y APE + + D WSFGV+LYE++ G+ ++E++L +R
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG---QDEEELFHSIR 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ FGLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 25 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 70
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLL 125
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 126 YQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYV 179
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 31 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 76
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 131
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 132 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 185
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 245
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 246 EFMKKLQPTVRNYVENRPKYAGLTFPKL 273
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
G YLH ++I RD K N+ L+ED + K+ DFGLA + E G Y
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNY 181
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN--------LPRNEQKLLEWVRPY 324
APE + + + DVWS G ++Y L+ G+ E + + +NE + + + P
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPV 241
Query: 325 VSDSKKFHLIIDP 337
+ + L DP
Sbjct: 242 AASLIQKMLQTDP 254
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 36 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 84
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 85 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEPHA---R 137
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 138 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 193
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 194 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 70 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLM 115
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 170
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 171 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 224
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 33 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 78
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 133
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 187
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 247
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 33 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 78
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 133
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 187
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 247
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ D GLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++Y++ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 18 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 64
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 65 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 119
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K+++FG + P
Sbjct: 120 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLC 169
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 64 FERIKTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 112
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 113 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 165
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 166 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 221
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 222 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G + G Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEY 171
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 25 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 70
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 125
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 126 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 179
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 43/263 (16%)
Query: 125 DVAIKQLNRQGFQGHK--EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH 182
D+ +K L + + K ++ E L + HPN++ ++G C L+ M
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITHWMP 92
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYK 242
SL + L + +K A D ARG+A+LH ++ + + ++++DED
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMT 151
Query: 243 AKLS--DFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQ-----TGRLTAKSDVWSFGVV 295
A++S D + Q P + APE +Q T R +A D+WSF V+
Sbjct: 152 ARISMADVKFSFQSP---------GRMYAPAWVAPEALQKKPEDTNRRSA--DMWSFAVL 200
Query: 296 LYELITGRRAVE--RNLPRNEQKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXX 353
L+EL+T N+ + LE +RP + H+
Sbjct: 201 LWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHV------------------SK 242
Query: 354 XXXXCLTKQPKSRPKMSEVVDIL 376
C+ + P RPK +V IL
Sbjct: 243 LMKICMNEDPAKRPKFDMIVPIL 265
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 29 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 77
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 78 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 130
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 131 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 186
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 187 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 106/270 (39%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------VAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
VV H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS GV++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 26 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 71
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 127 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 48/268 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ LD VAIK+L+R FQ K E+ +
Sbjct: 26 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLM 71
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E LV ELM + +L + L +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLL 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 127 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 312 RNEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 103/267 (38%), Gaps = 46/267 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNR--QGFQGHKEWINEVNFLG 150
IG G G V + +D+ LD VAIK+L+R Q K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 151 VVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
V H N++ L+ E LV ELM + +L + L +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLY 133
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVV 187
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLPR 312
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 313 NEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
++EV L + HPN++KL + +D+R LV E+ L D ++ R + +
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFF--EDKRNY--YLVMEVYRGGELFDEIILR--QKFSEVD 105
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGL 259
I + G YLH+ ++ RD K N+LL+ D K+ DFGL+ +
Sbjct: 106 AAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---V 159
Query: 260 GHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE ++ + K DVWS GV+LY L+ G
Sbjct: 160 GGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ QG E+ + +
Sbjct: 27 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 125
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 126 LYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 178
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEY 171
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 21 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 67
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y E LS+ +I L
Sbjct: 68 SHLRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--- 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 123 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 172
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G + G Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 171
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G+G FG V +++ G + + V K+ +Q + + EV L +
Sbjct: 33 VLGKGSFGEVILCKDKIT-------GQECAVKVISKRQVKQK-TDKESLLREVQLLKQLD 84
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HPN+ KL + +++G LV E+ L D ++SR + + +I + G
Sbjct: 85 HPNIXKLYEFF---EDKGY-FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSG 138
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
+ Y H+ +++ RD K N+LL+ +D ++ DFGL+
Sbjct: 139 ITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKXKDKIGTA 192
Query: 271 XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + G K DVWS GV+LY L++G
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ D GLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G + G Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 176
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
++EV L + HPN++KL Y +D+R LV E+ L D ++ R + +
Sbjct: 69 LDEVAVLKQLDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILR--QKFSEVD 122
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGL 259
I + G YLH+ ++ RD K N+LL+ D K+ DFGL+ +
Sbjct: 123 AAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---V 176
Query: 260 GHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE ++ + K DVWS GV+LY L+ G
Sbjct: 177 GGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ QG E+ + +
Sbjct: 27 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 125
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 126 LYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 178
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 103/267 (38%), Gaps = 46/267 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNR--QGFQGHKEWINEVNFLG 150
IG G G V + +D+ LD VAIK+L+R Q K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 151 VVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
V H N++ L+ E LV ELM + +L + L +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLY 133
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVV 187
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI------TGRRAVER----------NLPR 312
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 313 NEQKLLEWVRPYVSDSKKFHLIIDPRL 339
+KL VR YV + K+ + P+L
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ QG E+ + +
Sbjct: 27 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLD 71
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTL-----PVIYV-K 125
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 126 LYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 178
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEY 171
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 19 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 65
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 66 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 120
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K+++FG + P
Sbjct: 121 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLC 170
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGVV 152
+G G +G V ++ D +T GH VA+K+L+R Q K E+ L +
Sbjct: 30 VGSGAYGSV------CAAFDTKT-GHR----VAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 153 KHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLAWI 201
KH N++ L V A E LV LM K +DH+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV----------- 127
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ DF LAR E G+
Sbjct: 128 -QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY 182
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + D+WS G ++ EL+TGR
Sbjct: 183 -----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXY 272
L YLH +++RD K N++LD+D K++DFGL ++G +G Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKXFCGTPEY 171
Query: 273 AAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
APE ++ D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 106/270 (39%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
VV H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS GV++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 28 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 76
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 77 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 129
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 130 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 184
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 93 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSK--LDVAIKQLNR--QGFQGHKEWINEVNFLG 150
+G G +G V + D+K L VA+K+L+R Q K E+ L
Sbjct: 30 VGSGAYGSV-------------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 151 VVKHPNLVKL--VGYCAEDDERGMQRLLVYELMH---------NKSLEDHLLSRVPTPLA 199
+KH N++ L V A E LV LM K +DH+
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 127
Query: 200 WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGL 259
+ I Q RGL Y+H +I RD K SN+ ++ED + K+ D GLAR E
Sbjct: 128 ---QFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT 180
Query: 260 GHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
G+ Y APE + D+WS G ++ EL+TGR
Sbjct: 181 GY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 32 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 80
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 81 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 133
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 134 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 188
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + SK +A+K QL + G + + EV
Sbjct: 21 LGKGKFGNVYLAREK-----------QSKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 67
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y E LS+ +I L
Sbjct: 68 SHLRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--- 122
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 123 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLX 172
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 143 INEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
+ EV L ++ HPN++KL + +D+R LV E L D ++ R+ +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFF--EDKRNY--YLVMECYKGGELFDEIIHRMK--FNEVD 137
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD---EDYKAKLSDFGLA-----RQG 254
I + G+ YLH+ ++ RD K N+LL+ +D K+ DFGL+ ++
Sbjct: 138 AAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
E LG Y APE ++ + K DVWS GV+L+ L+ G
Sbjct: 195 MKERLG--------TAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 37 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 85
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 86 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 138
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 139 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 193
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 237
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 143 INEVNFLGVVKHPNLVK---------------LVGYCAEDDERGMQRLLVYELMHNKSLE 187
++EVN L +KHPN+V+ ++ YC D + ++ + L+
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD---LASVITKGTKERQYLD 109
Query: 188 DHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSD 247
+ + RV T L +A + + + G LH RD K +N+ LD KL D
Sbjct: 110 EEFVLRVMTQLT-LALKECHRRSDGGHTVLH---------RDLKPANVFLDGKQNVKLGD 159
Query: 248 FGLARQGPPEGLGHXXXXXXX---XXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
FGLAR L H Y +PE + KSD+WS G +LYEL
Sbjct: 160 FGLARI-----LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 39 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 87
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 88 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 140
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 141 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 195
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 143 INEVNFLGVVKHPNLVK---------------LVGYCAEDDERGMQRLLVYELMHNKSLE 187
++EVN L +KHPN+V+ ++ YC D + ++ + L+
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD---LASVITKGTKERQYLD 109
Query: 188 DHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSD 247
+ + RV T L +A + + + G LH RD K +N+ LD KL D
Sbjct: 110 EEFVLRVMTQLT-LALKECHRRSDGGHTVLH---------RDLKPANVFLDGKQNVKLGD 159
Query: 248 FGLARQGPPEGLGHXXXXXXX---XXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
FGLAR L H Y +PE + KSD+WS G +LYEL
Sbjct: 160 FGLARI-----LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL--NRQGFQGHKEWINEVNFLGV 151
L+GEG +G V + D+ VAIK+ + K + E+ L
Sbjct: 32 LVGEGSYGMVMK-----------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
++H NLV L+ C ++ + LV+E + + L+D L P L + K
Sbjct: 81 LRHENLVNLLEVC----KKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQII 134
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXX 270
G+ + H +I RD K NIL+ + KL DFG AR P G
Sbjct: 135 NGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---GEVYDDEVATR 188
Query: 271 XYAAPEYVQTGRLTAKS-DVWSFGVVLYELITG 302
Y APE + K+ DVW+ G ++ E+ G
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ SG+ A+K L++Q K+ +NE
Sbjct: 43 FDRIKTLGTGSFG-------RVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y AP + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-----QLNRQGFQGHKEWINEVNFL 149
+G+G FG VY + K +A+K QL + G + + EV
Sbjct: 13 LGKGKFGNVYLAREK-----------QRKFILALKVLFKAQLEKAGVE--HQLRREVEIQ 59
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--PTPLAWIARLKIA 207
++HPN+++L GY D + +L Y + E LS+ +I L
Sbjct: 60 SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--- 114
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
A L+Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 115 ---ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLC 164
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERN 309
Y PE ++ K D+WS GV+ YE + G+ E N
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG VY+ ++ + A K ++ + + ++++ E++ L H
Sbjct: 45 LGDGAFGKVYKA-----------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 155 PNLVKLV-GYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
PN+VKL+ + E++ ++ E ++ D ++ + PL + +
Sbjct: 94 PNIVKLLDAFYYENN-----LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L YLH D ++I RD K NIL D KL+DFG++ + +
Sbjct: 148 LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRTIQRRDSFIGTPYWM 202
Query: 274 APEYV--QTGR---LTAKSDVWSFGVVLYEL 299
APE V +T + K+DVWS G+ L E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+R R + ++ +K + + +++ + E+ + V++H
Sbjct: 59 LGTGAFGVVHRVTERATGNNFA-----AKFVMTPHESDKETVR------KEIQTMSVLRH 107
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELM------------HNKSLEDHLLSRVPTPLAWIA 202
P LV L +D+E +++YE M HNK ED +
Sbjct: 108 PTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVADEHNKMSEDEAV----------- 152
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL--DEDYKAKLSDFGLARQGPPEGLG 260
+ + +GL ++HE + D K NI+ + KL DFGL P+
Sbjct: 153 --EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--- 204
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+AAPE + + +D+WS GV+ Y L++G
Sbjct: 205 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 40/241 (16%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW 142
++ R + +G+G +G V+RG+ S VA+K + + Q W
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLWHGES-------------VAVKIFSSRDEQS---W 47
Query: 143 INEVNFLGVV--KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP-LA 199
E V +H N++ + Q L+ + SL D L + P LA
Sbjct: 48 FRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA 107
Query: 200 WIARLKIAQDAARGLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--- 251
L++A AA GLA+LH E+ + RDFK+ N+L+ + + ++D GLA
Sbjct: 108 ----LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH 163
Query: 252 RQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLT------AKSDVWSFGVVLYELITGRRA 305
QG + L Y APE + T +D+W+FG+VL+E+ RR
Sbjct: 164 SQG-SDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRT 220
Query: 306 V 306
+
Sbjct: 221 I 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 143 INEVNFLGVVKHPNLVK---------------LVGYCAEDDERGMQRLLVYELMHNKSLE 187
++EVN L +KHPN+V+ ++ YC D + ++ + L+
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD---LASVITKGTKERQYLD 109
Query: 188 DHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSD 247
+ + RV T L +A + + + G LH RD K +N+ LD KL D
Sbjct: 110 EEFVLRVMTQLT-LALKECHRRSDGGHTVLH---------RDLKPANVFLDGKQNVKLGD 159
Query: 248 FGLARQGPPEGLGHXXXXXXX---XXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
FGLAR L H Y +PE + KSD+WS G +LYEL
Sbjct: 160 FGLARI-----LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 19/219 (8%)
Query: 95 IGEGGFGCVYRGVVR--VSSDDHQT--------SGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V + SD T S H ++ + + +L + G+ +N
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MN 104
Query: 145 EVNFLG--VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
VN LG + P LV + YC D R + +K+ ++ L
Sbjct: 105 IVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLED 162
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
L + A+G+A+L + I RD NILL K+ DFGLAR +
Sbjct: 163 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G+ L+EL +
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 159 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 207
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 208 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 260
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 261 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 315
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 48/222 (21%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+R R + ++ +K + + +++ + E+ + V++H
Sbjct: 165 LGTGAFGVVHRVTERATGNNFA-----AKFVMTPHESDKETVR------KEIQTMSVLRH 213
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELM------------HNKSLEDHLLSRVPTPLAWIA 202
P LV L +D+E +++YE M HNK ED + +
Sbjct: 214 PTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVADEHNKMSEDEAVEYM-------- 261
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLG 260
+ +GL ++HE + D K NI+ + KL DFGL P+
Sbjct: 262 -----RQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--- 310
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+AAPE + + +D+WS GV+ Y L++G
Sbjct: 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG VY+ ++ + A K ++ + + ++++ E++ L H
Sbjct: 45 LGDGAFGKVYKA-----------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 155 PNLVKLV-GYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
PN+VKL+ + E++ ++ E ++ D ++ + PL + +
Sbjct: 94 PNIVKLLDAFYYENN-----LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L YLH D ++I RD K NIL D KL+DFG++ + +
Sbjct: 148 LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRXIQRRDSFIGTPYWM 202
Query: 274 APEYV--QTGR---LTAKSDVWSFGVVLYEL 299
APE V +T + K+DVWS G+ L E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 19/219 (8%)
Query: 95 IGEGGFGCVYRGVVR--VSSDDHQT--------SGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V + SD T S H ++ + + +L + G+ +N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MN 111
Query: 145 EVNFLG--VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
VN LG + P LV + YC D R + +K+ ++ L
Sbjct: 112 IVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLED 169
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
L + A+G+A+L + I RD NILL K+ DFGLAR +
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G+ L+EL +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG VY+ ++ + A K ++ + + ++++ E++ L H
Sbjct: 45 LGDGAFGKVYKA-----------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 155 PNLVKLV-GYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
PN+VKL+ + E++ ++ E ++ D ++ + PL + +
Sbjct: 94 PNIVKLLDAFYYENN-----LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L YLH D ++I RD K NIL D KL+DFG++ + +
Sbjct: 148 LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRXIQRRDXFIGTPYWM 202
Query: 274 APEYV--QTGR---LTAKSDVWSFGVVLYEL 299
APE V +T + K+DVWS G+ L E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 61 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 105
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 159
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 160 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 212
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG G V VR S KL VA+K+++ + Q + NEV + +H
Sbjct: 82 IGEGSTGIVCIATVRSSG----------KL-VAVKKMDLRKQQRRELLFNEVVIMRDYQH 130
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+V++ DE +V E + +L D +++ IA + +A + L
Sbjct: 131 ENVVEMYNSYLVGDEL----WVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLA--VLQAL 183
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+ LH + +I RD K+ +ILL D + KLSDFG Q E + A
Sbjct: 184 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMA 238
Query: 275 PEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
PE + + D+WS G+++ E++ G P K++
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 42/229 (18%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVN 147
+++ IGEG +G V S+ DH K VAIK+++ Q + + + E+
Sbjct: 45 YTQLQYIGEGAYGMV------SSAYDHV-----RKTRVAIKKISPFEHQTYCQRTLREIQ 93
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSLE-DHLLSRVPTP 197
L +H N++ + M+ + + Y+L+ ++ L DH+
Sbjct: 94 ILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY----- 148
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
RGL Y+H ++ RD K SN+L++ K+ DFGLAR PE
Sbjct: 149 --------FLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPE 197
Query: 258 GLGHXXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
H Y APE + + KS D+WS G +L E+++ R
Sbjct: 198 H-DHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 43 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 91
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 92 KRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 144
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ +++DFG A++ G
Sbjct: 145 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCG 200
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 201 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG V++ + V SD+ VAIK++ Q + E+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKL-VESDE-----------VAIKKV----LQDKRFKNRELQ 84
Query: 148 FLGVVKHPNLVKLVGYCAED----DERGMQRLLVY--ELMHNKSLEDHLLSRVPTPLAWI 201
+ +VKHPN+V L + + DE + +L Y E ++ S L + P+ I
Sbjct: 85 IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT-MPMLLI 143
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLG 260
+L + Q R LAY+H + RD K N+LLD KL DFG A+ G
Sbjct: 144 -KLYMYQ-LLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI---LIAG 195
Query: 261 HXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T D+WS G V+ EL+ G+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 19/219 (8%)
Query: 95 IGEGGFGCVYRGVVR--VSSDDHQT--------SGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V + SD T S H ++ + + +L + G+ +N
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MN 106
Query: 145 EVNFLG--VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
VN LG + P LV + YC D R + +K+ ++ L
Sbjct: 107 IVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLED 164
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
L + A+G+A+L + I RD NILL K+ DFGLAR +
Sbjct: 165 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G+ L+EL +
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V++ H+ +G L + + ++GF + E+ L ++KH
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLLKH 76
Query: 155 PNLVKLVGYC---AEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
N+V L+ C A R + LV++ + LLS V ++ Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQML 134
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXX 268
GL Y+H +++ RD K +N+L+ D KL+DFGLAR +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 269 XXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
Y PE + R D+W G ++ E+ T ++ N +++ L+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 33 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 130
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 131 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 182
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 58 YTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQI 102
Query: 149 LGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPL 198
+ + H N+V+L + E+ + L VY + + S L P+
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PV 157
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPE 257
++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 158 IYV-KLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---L 209
Query: 258 GLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 210 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 40 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 84
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 85 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 139
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 140 VIYV-KLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 191
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 192 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 19/219 (8%)
Query: 95 IGEGGFGCVYRGVVR--VSSDDHQT--------SGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V + SD T S H ++ + + +L + G+ +N
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MN 88
Query: 145 EVNFLG--VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
VN LG + P LV + YC D R + +K+ ++ L
Sbjct: 89 IVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLED 146
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
L + A+G+A+L + I RD NILL K+ DFGLAR +
Sbjct: 147 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G+ L+EL +
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 38/221 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 51 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK------ 205
+H N++ + + R E M + L HL+ L L
Sbjct: 98 FRHENIIGI---------NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 148
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 149 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFL 204
Query: 266 XXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 61
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 62 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 115
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 116 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P L KL + +D+ +V E + HL + R P A R
Sbjct: 93 KRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P L KL + +D+ +V E + HL + R P A R
Sbjct: 93 KRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 61 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 105
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 159
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 160 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 212
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 29 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 73
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 74 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 128
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 129 VIYV-KLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 180
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 181 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 19/219 (8%)
Query: 95 IGEGGFGCVYRGVVR--VSSDDHQT--------SGHDSKLDVAIKQLNRQGFQGHKEWIN 144
+G G FG V + SD T S H ++ + + +L + G+ +N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH--MN 111
Query: 145 EVNFLG--VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIA 202
VN LG + P LV + YC D R + +K+ ++ L
Sbjct: 112 IVNLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLED 169
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHX 262
L + A+G+A+L + I RD NILL K+ DFGLAR +
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
+ APE + T +SDVWS+G+ L+EL +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 39 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 83
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 137
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 138 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 190
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 55 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 99
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 153
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 154 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 206
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 65 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 109
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 163
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 164 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 216
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 34 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 78
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 79 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 133
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 134 VIYV-KLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 185
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 186 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H+ +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIRTLGTGSFG-------RVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
V P LVKL + +D+ +V E + HL + R P A R
Sbjct: 93 KRIQQAVNFPFLVKL-EFSFKDNS---NLYMVLEYAPGGEMFSHLRRIGRFSEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+L+D+ K++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP LV L C + + R V E ++ L H+ + P AR A+ +
Sbjct: 80 HPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQRQRKLPEEH-ARFYSAE-ISLA 133
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXXXX 271
L YLHE +I+RD K N+LLD + KL+D+G+ ++G P G
Sbjct: 134 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----GDTTSXFCGTPN 186
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE ++ D W+ GV+++E++ GR
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP LV L C + + R V E ++ L H+ + P AR A+ +
Sbjct: 112 HPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQRQRKLPEEH-ARFYSAE-ISLA 165
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXXXX 271
L YLHE +I+RD K N+LLD + KL+D+G+ ++G P G
Sbjct: 166 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----GDTTSTFCGTPN 218
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE ++ D W+ GV+++E++ GR
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 39 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 83
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 137
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 138 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 190
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 42/223 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVVK 153
IGEG +G V V+ K+ VAIK+++ Q + + + E+ L +
Sbjct: 33 IGEGAYGMVCSAYDNVN-----------KVRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 154 HPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWIAR 203
H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------- 130
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 131 --FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH-DHTG 184
Query: 264 XXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 94 LIGE-GGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV 152
+IGE G FG VY+ ++ + A K ++ + + ++++ E++ L
Sbjct: 16 IIGELGDFGKVYKA-----------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC 64
Query: 153 KHPNLVKLV-GYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
HPN+VKL+ + E++ ++ E ++ D ++ + PL + +
Sbjct: 65 DHPNIVKLLDAFYYENN-----LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTL 118
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
L YLH D ++I RD K NIL D KL+DFG++ + +
Sbjct: 119 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXI-QRRDSFIGTPY 174
Query: 272 YAAPEYV--QTGR---LTAKSDVWSFGVVLYEL 299
+ APE V +T + K+DVWS G+ L E+
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 50/228 (21%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINE 145
F R +G G FG RV H +G+ A+K L++Q K+ +NE
Sbjct: 44 FERIKTLGTGSFG-------RVMLVKHMETGNH----YAMKILDKQKVVKLKQIEHTLNE 92
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIAR 203
L V P L KL + +D+ +V E + HL + R P A R
Sbjct: 93 KRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFXEPHA---R 145
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ---------G 254
AQ YLH LI+RD K N+++D+ K++DFG A++ G
Sbjct: 146 FYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG 201
Query: 255 PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
PE Y APE + + D W+ GV++YE+ G
Sbjct: 202 TPE--------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 172 MQRL-LVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFR 228
M RL V E ++ L H+ + R P A + A + A GL +L + +I+R
Sbjct: 414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFYAAEIAIGLFFLQSK---GIIYR 466
Query: 229 DFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSD 288
D K N++LD + K++DFG+ ++ +G+ Y APE + D
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYGKSVD 524
Query: 289 VWSFGVVLYELITGRRAVE 307
W+FGV+LYE++ G+ E
Sbjct: 525 WWAFGVLLYEMLAGQAPFE 543
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 32 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 76
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 130
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 131 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 183
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP LV L C + + R V E ++ L H+ + P AR A+ +
Sbjct: 69 HPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQRQRKLPEEH-ARFYSAE-ISLA 122
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXXXX 271
L YLHE +I+RD K N+LLD + KL+D+G+ ++G P G
Sbjct: 123 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----GDTTSXFCGTPN 175
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE 307
Y APE ++ D W+ GV+++E++ GR +
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
HP LV L C + + R V E ++ L H+ + P AR A+ +
Sbjct: 65 HPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQRQRKLPEEH-ARFYSAE-ISLA 118
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXXXXX 271
L YLHE +I+RD K N+LLD + KL+D+G+ ++G P G
Sbjct: 119 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----GDTTSXFCGTPN 171
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE ++ D W+ GV+++E++ GR
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V++ H+ +G L + + ++GF + E+ L ++KH
Sbjct: 25 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLLKH 75
Query: 155 PNLVKLVGYC---AEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
N+V L+ C A R + LV++ + LLS V ++ Q
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--AGLLSNVLVKFTLSEIKRVMQML 133
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXX 268
GL Y+H +++ RD K +N+L+ D KL+DFGLAR +
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 269 XXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
Y PE + R D+W G ++ E+ T ++ N +++ L+
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 21 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 65
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 120
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 121 VIYV-KLYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 172
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 32/216 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+G G FG D H S L+ IK +N+ Q E I E+ L +
Sbjct: 30 LGSGAFG-----------DVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLA----WIARLKIAQD 209
HPN++K+ + +D M +V E L + ++S A ++A L +
Sbjct: 79 HPNIIKI--FEVFEDYHNM--YIVMETCEGGELLERIVSAQARGKALSEGYVAEL--MKQ 132
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYK---AKLSDFGLARQGPPEGLGHXXXXX 266
LAY H + ++ +D K NIL + K+ DFGLA +
Sbjct: 133 MMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTNA 186
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + +T K D+WS GVV+Y L+TG
Sbjct: 187 AGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 28 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 126
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 127 LYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 179
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG +G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 64 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 117
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 105/270 (38%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
VV H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS G ++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 106 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 150
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 204
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 205 LYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 257
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 21 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 65
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 120
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 121 VIYV-KLYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 172
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 172 MQRL-LVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFR 228
M RL V E ++ L H+ + R P A + A + A GL +L + +I+R
Sbjct: 93 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFYAAEIAIGLFFLQSK---GIIYR 145
Query: 229 DFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSD 288
D K N++LD + K++DFG+ ++ +G+ Y APE + D
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYGKSVD 203
Query: 289 VWSFGVVLYELITGRRAVE 307
W+FGV+LYE++ G+ E
Sbjct: 204 WWAFGVLLYEMLAGQAPFE 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 31 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 128
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 129 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DH 180
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 30/177 (16%)
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLEWVR---P 323
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E R P
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 316
Query: 324 YVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
+ + + ++D C +P RP SE+V+ LGN++
Sbjct: 317 DYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 352
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 21 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 65
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ + L VY + + S L P
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 120
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 121 VIYV-KLYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 172
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 105/270 (38%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
VV H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS G ++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGV 151
LIG G +G VY + +++ +VAIK++NR + K + E+ L
Sbjct: 33 LIGRGSYGYVYLAYDK-----------NTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+K +++L DD L + + + L+ L + P L I +
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK--LFKTPIFLTEEHIKTILYNLL 139
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ------------------ 253
G ++HE +I RD K +N LL++D K+ DFGLAR
Sbjct: 140 LGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 254 -GP-PEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELIT 301
GP + L Y APE + KS D+WS G + EL+
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 31 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 128
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 129 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DH 180
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG G FG VY Q DS VAIK++ Q + E+ + +
Sbjct: 31 VIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 75
Query: 154 HPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTPLAWIAR 203
H N+V+L + E+ + L VY + + S L P+ ++ +
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-----PVIYV-K 129
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPPEGLGHX 262
L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q G
Sbjct: 130 LYMYQ-LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEP 182
Query: 263 XXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T+ DVWS G VL EL+ G+
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V++ H+ +G L + + ++GF + E+ L ++KH
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLLKH 76
Query: 155 PNLVKLVGYC---AEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
N+V L+ C A R + LV++ + LLS V ++ Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQML 134
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXX 268
GL Y+H +++ RD K +N+L+ D KL+DFGLAR +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 269 XXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
Y PE + R D+W G ++ E+ T ++ N +++ L+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 30/177 (16%)
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A+G+ +L + I RD NILL E K+ DFGLAR +
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQ---KLLEWVR---P 323
+ APE + T +SDVWSFGV+L+E+ + + + +E+ +L E R P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318
Query: 324 YVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVVDILGNII 380
+ + + ++D C +P RP SE+V+ LGN++
Sbjct: 319 DYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 354
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IG+G FG V++ H+ +G L + + ++GF + E+ L ++KH
Sbjct: 26 IGQGTFGEVFKA-------RHRKTGQKVALKKVLMENEKEGFPITA--LREIKILQLLKH 76
Query: 155 PNLVKLVGYC---AEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
N+V L+ C A R + LV++ + LLS V ++ Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQML 134
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--PPEGLGHXXXXXXX 268
GL Y+H +++ RD K +N+L+ D KL+DFGLAR +
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 269 XXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
Y PE + R D+W G ++ E+ T ++ N +++ L+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 31 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 128
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 129 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 180
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGHKE-WINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 31 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 128
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 129 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH-DH 180
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RRAVER---NLP 311
Y APE + D+WS G ++ E+I G + +E+ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 247 EFMKKLQPTVRTYVENRPKY 266
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWI-NEVNFLGVVK 153
+G G FG V+R V + + V + + + K + NE++ + +
Sbjct: 59 LGSGAFGVVHRCVEKATGR------------VFVAKFINTPYPLDKYTVKNEISIMNQLH 106
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVY----ELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
HP L+ L + A +D+ M +L + EL + ED+ +S + +
Sbjct: 107 HPKLINL--HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV-------INYMRQ 157
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXX 266
A GL ++HE ++ D K NI+ E KA K+ DFGLA + P+ +
Sbjct: 158 ACEGLKHMHEH---SIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEI---VKVT 210
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+AAPE V + +D+W+ GV+ Y L++G
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 79 FAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG 138
F ++++ F+ +L G+G F +++GV R D G + +V +K L++
Sbjct: 2 FHKIRNEDLIFNESL--GQGTFTKIFKGVRREVGD----YGQLHETEVLLKVLDKAHRNY 55
Query: 139 HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPL 198
+ + + + + H +LV G C DE +LV E + SL D L + +
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCVCGDEN----ILVQEFVKFGSL-DTYLKKNKNCI 110
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL--DEDYKA------KLSDFGL 250
+ +L++A+ A + +L E LI + NILL +ED K KLSD G+
Sbjct: 111 NILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITG 302
+ P+ + + PE ++ + L +D WSFG L+E+ +G
Sbjct: 168 SITVLPKDI------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 33 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 130
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 131 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 182
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
KI + L +L E + ++I RD K SNILLD KL DFG++ Q
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKT 183
Query: 265 XXXXXXXYAAPEYVQTGR----LTAKSDVWSFGVVLYELITGR 303
Y APE + +SDVWS G+ LYEL TGR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 29 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 126
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 127 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 178
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 29 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 126
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 127 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 178
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RRAVER---NLP 311
Y APE + D+WS G ++ E+I G + +E+ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 247 EFMKKLQPTVRTYVENRPKY 266
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 36 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 133
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 134 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 185
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 37 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 134
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 135 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 186
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 28 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 125
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 126 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 177
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 42/223 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVVK 153
IGEG +G V V+ K+ VAIK+++ Q + + + E+ L +
Sbjct: 39 IGEGAYGMVCSAYDNVN-----------KVRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 154 HPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWIAR 203
H N++ + M+ + + Y+L+ + L DH+
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------- 136
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 137 --FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTG 190
Query: 264 XXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 191 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 42/223 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH-KEWINEVNFLGVVK 153
IGEG +G V V+ K+ VAIK+++ Q + + + E+ L +
Sbjct: 31 IGEGAYGMVCSAYDNVN-----------KVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 154 HPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWIAR 203
H N++ + M+ + + Y+L+ + L DH+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------- 128
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXX 263
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 129 --FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTG 182
Query: 264 XXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 183 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 33 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 78
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 133
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 187
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RRAVER---NLP 311
Y APE + D+WS G ++ E+I G + +E+ P
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 248 EFMKKLQPTVRTYVENRPKY 267
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 36 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 133
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 134 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 185
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 51 IGEGAYGMV-------------CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 148
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 149 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 200
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH---KEWINEVNFLGV 151
+G G +G V + + S + VAIK+L+R FQ K E+ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEK-----------VAIKKLSR-PFQSEIFAKRAYRELLLLKH 79
Query: 152 VKHPNLVKLVG-YCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
++H N++ L+ + R LV M T L I LK +++
Sbjct: 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-------------TDLQKIMGLKFSEE 126
Query: 210 AA--------RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
+GL Y+H ++ RD K N+ ++ED + K+ DFGLAR E G+
Sbjct: 127 KIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY 183
Query: 262 XXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + + D+WS G ++ E++TG+
Sbjct: 184 -----VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 95/228 (41%), Gaps = 40/228 (17%)
Query: 88 GFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVN 147
++ +IG G FG VY Q DS VAIK++ Q + E+
Sbjct: 21 SYTDTKVIGNGSFGVVY-----------QAKLCDSGELVAIKKV----LQDKRFKNRELQ 65
Query: 148 FLGVVKHPNLVKLVGYCAEDDERGMQRLL----------VYELMHNKSLEDHLLSRVPTP 197
+ + H N+V+L + E+ L VY + + S L P
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTL-----P 120
Query: 198 LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA-KLSDFGLARQGPP 256
+ ++ +L + Q R LAY+H F + RD K N+LLD D KL DFG A+Q
Sbjct: 121 VIYV-KLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--- 172
Query: 257 EGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITGR 303
G Y APE + T+ DVWS G VL EL+ G+
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 35/237 (14%)
Query: 118 SGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFLGVVKHPNLVKLVGYCAEDD--ER 170
+ +D+ L+ VAIK+L+R FQ K E+ + V H N++ L+ E
Sbjct: 44 AAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 102
Query: 171 GMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDF 230
+V ELM + +L + L + G+ +LH +I RD
Sbjct: 103 FQDVYIVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDL 154
Query: 231 KTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVW 290
K SNI++ D K+ DFGLAR G Y APE + D+W
Sbjct: 155 KPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIW 211
Query: 291 SFGVVLYELITG-------------RRAVER---NLPRNEQKLLEWVRPYVSDSKKF 331
S G ++ E+I G + +E+ P +KL VR YV + K+
Sbjct: 212 SVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 268
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++ EGGF VY + Q G S + A+K+L + ++ I EV F+ +
Sbjct: 35 VLAEGGFAFVY---------EAQDVG--SGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 154 -HPNLVKLVGYCA----EDDERGMQRLLVYELMHNKSLEDHLLSRVPT--PLAWIARLKI 206
HPN+V+ + E D + LL+ EL + +E L ++ + PL+ LKI
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGPLSCDTVLKI 141
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR----------QGPP 256
R + ++H + +I RD K N+LL KL DFG A
Sbjct: 142 FYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 257 EGLGHXXXXXXXXXXYAAPEYV---QTGRLTAKSDVWSFGVVLYEL 299
L Y PE + + K D+W+ G +LY L
Sbjct: 201 RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL 246
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG+G F V R + R +T + V + + ++ E + ++K
Sbjct: 31 VIGKGAFSVVRRCINR------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HP++V+L+ + D GM +V+E M L ++ R ++ +A R
Sbjct: 85 HPHIVELLETYSSD---GML-YMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQ 138
Query: 213 ---GLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
L Y H D +I RD K N+LL + KL DFG+A Q GL
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGR 193
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V+ DVW GV+L+ L++G
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 124 LDVAIKQLNRQGFQGH---KEWINEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVY 178
++VA+K+L+R FQ K E+ L V H N++ L+ E LV
Sbjct: 50 INVAVKKLSR-PFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 179 ELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD 238
ELM + +L + L + G+ +LH +I RD K SNI++
Sbjct: 109 ELM-----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 239 EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYE 298
D K+ DFGLAR Y APE + A D+WS G ++ E
Sbjct: 161 SDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 299 LITG 302
L+ G
Sbjct: 218 LVKG 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 207 AQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
A + + GL +LH+ +I+RD K N++LD + K++DFG+ ++ +G+
Sbjct: 126 AAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREF 180
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + D W++GV+LYE++ G+
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN-EVNFLGVVK 153
+GEG G V V RV+ + VA+K ++ + E I E+ ++
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-----------VAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARG 213
H N+VK G+ E G + L E L D + + P R G
Sbjct: 63 HENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAG 116
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
+ YLH + RD K N+LLDE K+SDFGLA Y
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 274 APEYVQTGRLTAKS-DVWSFGVVLYELITG 302
APE ++ A+ DVWS G+VL ++ G
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAIK+++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 104/270 (38%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS G ++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDS--KLDVAIKQLNRQGFQGH-KEWINEVNFLGV 151
IGEG +G V S +D+ K+ VAI++++ Q + + + E+ L
Sbjct: 35 IGEGAYGMV-------------CSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLV---------YELMHNKSL-EDHLLSRVPTPLAWI 201
+H N++ + M+ + + Y+L+ + L DH+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY--------- 132
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGH 261
RGL Y+H ++ RD K SN+LL+ K+ DFGLAR P+ H
Sbjct: 133 ----FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DH 184
Query: 262 XXXXXXXXXX--YAAPEYVQTGRLTAKS-DVWSFGVVLYELITGR 303
Y APE + + KS D+WS G +L E+++ R
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEW 142
++ R + +G+G +G V+RG + +VA+K + + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGE-------------NVAVKIFSSRD---EKSW 47
Query: 143 INEVNFLGVV--KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW 200
E V +H N++ + Q L+ SL D+L T L
Sbjct: 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDT 104
Query: 201 IARLKIAQDAARGLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQ 253
++ L+I A GLA+LH E+ + RD K+ NIL+ ++ + ++D GLA
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164
Query: 254 GPPEGLGHXXXXXXXXXXYAAPEYV-QTGRLTA-----KSDVWSFGVVLYELITGRRAVE 307
L Y APE + +T ++ + D+W+FG+VL+E+ RR V
Sbjct: 165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVS 222
Query: 308 RNL 310
+
Sbjct: 223 NGI 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 77 FSFAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF 136
F ++ R + +G+G +G V+RG + +VA+K + +
Sbjct: 27 LPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGE-------------NVAVKIFSSRD- 72
Query: 137 QGHKEWINEVNFLGVV--KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
K W E V +H N++ + Q L+ SL D+L
Sbjct: 73 --EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-- 128
Query: 195 PTPLAWIARLKIAQDAARGLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFG 249
T L ++ L+I A GLA+LH E+ + RD K+ NIL+ ++ + ++D G
Sbjct: 129 -TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 187
Query: 250 LA--RQGPPEGLGHXXXXXXXXXXYAAPEYV-QTGRLTA-----KSDVWSFGVVLYELIT 301
LA L Y APE + +T ++ + D+W+FG+VL+E+
Sbjct: 188 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-- 245
Query: 302 GRRAVERNL 310
RR V +
Sbjct: 246 ARRMVSNGI 254
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 104/270 (38%), Gaps = 68/270 (25%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM D LS+V +++
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM------DANLSQV---------IQME 122
Query: 208 QDAAR----------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPE 257
D R G+ +LH +I RD K SNI++ D K+ DFGLAR
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--- 176
Query: 258 GLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RR 304
G Y APE + D+WS G ++ E+I G +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 305 AVER---NLPRNEQKLLEWVRPYVSDSKKF 331
+E+ P +KL VR YV + K+
Sbjct: 237 VIEQLGTPSPEFMKKLQPTVRTYVENRPKY 266
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 77
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 132
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 133 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 186
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG-------------RRAVER---NLP 311
Y APE + D+WS G ++ E+I G + +E+ P
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 247 EFMKKLQPTVRTYVENRPKY 266
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 79 FAELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG 138
F ++++ F+ +L G+G F +++GV R D G + +V +K L++
Sbjct: 2 FHKIRNEDLIFNESL--GQGTFTKIFKGVRREVGD----YGQLHETEVLLKVLDKAHRNY 55
Query: 139 HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPL 198
+ + + + + H +LV G C DE +LV E + SL D L + +
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCFCGDEN----ILVQEFVKFGSL-DTYLKKNKNCI 110
Query: 199 AWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL--DEDYKA------KLSDFGL 250
+ +L++A+ A + +L E LI + NILL +ED K KLSD G+
Sbjct: 111 NILWKLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITG 302
+ P+ + + PE ++ + L +D WSFG L+E+ +G
Sbjct: 168 SITVLPKDI------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 63 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 170
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 90/230 (39%), Gaps = 38/230 (16%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEW 320
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 321 VRPYVSDSKKFHL----IIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSR 366
P++ D+K+ L ++ E Y L K PK R
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 63 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 117 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 170
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE-WINEVNFLGVV 152
++G G FG V +++ + S + VA+K L + +E ++E+ + +
Sbjct: 52 VLGSGAFGKV------MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 153 -KHPNLVKLVG-------------YCAEDD---------ERGMQRLLVYELMHNKSLEDH 189
H N+V L+G YC D E+ + + YE + K LE+
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE--NQKRLEEE 163
Query: 190 LLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFG 249
V L + L A A+G+ +L + + RD N+L+ K+ DFG
Sbjct: 164 EDLNV---LTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFG 217
Query: 250 LARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
LAR + + APE + G T KSDVWS+G++L+E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG +G VY+ + + + +L ++ I E++ L +KH
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+VKL D ++ LV H LL L + G+
Sbjct: 60 SNIVKLY------DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXXXYA 273
AY H D +++ RD K N+L++ + + K++DFGLAR G P Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEVVTLWYR 167
Query: 274 APEYVQ-TGRLTAKSDVWSFGVVLYELITG 302
AP+ + + + + D+WS G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG +G VY+ + + + +L ++ I E++ L +KH
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+VKL D ++ LV H LL L + G+
Sbjct: 60 SNIVKLY------DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXXXYA 273
AY H D +++ RD K N+L++ + + K++DFGLAR G P Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEVVTLWYR 167
Query: 274 APEYVQ-TGRLTAKSDVWSFGVVLYELITG 302
AP+ + + + + D+WS G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINEVN-FL 149
+IG+G FG V + R +++ + A+K L ++ KE ++E N L
Sbjct: 45 VIGKGSFGKVL--LARHKAEE---------VFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
VKHP LV L D + V + ++ L HL R L AR A +
Sbjct: 94 KNVKHPFLVGLHFSFQTAD----KLYFVLDYINGGELFYHL-QRERCFLEPRARF-YAAE 147
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX- 268
A L YLH +++RD K NILLD L+DFGL + E + H
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFC 200
Query: 269 -XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + D W G VLYE++ G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
IGEG +G VY+ + + + +L ++ I E++ L +KH
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
N+VKL D ++ LV H LL L + G+
Sbjct: 60 SNIVKLY------DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXXXXYA 273
AY H D +++ RD K N+L++ + + K++DFGLAR G P Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEIVTLWYR 167
Query: 274 APEYVQ-TGRLTAKSDVWSFGVVLYELITG 302
AP+ + + + + D+WS G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---- 200
E + + P +V+L +CA D++ + +V E M L +L+S P W
Sbjct: 125 ERDIMAFANSPWVVQL--FCAFQDDKYL--YMVMEYMPGGDLV-NLMSNYDVPEKWAKFY 179
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
A + +A DA + +H RD K N+LLD+ KL+DFG + G+
Sbjct: 180 TAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 261 HXXXXXXXXXXYAAPEYVQT----GRLTAKSDVWSFGVVLYELITG 302
H Y +PE +++ G + D WS GV L+E++ G
Sbjct: 231 H-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 33/214 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINEVNFLGV 151
IG G F VYR + + VA+K++ + + + I E++ L
Sbjct: 40 IGRGQFSEVYRAACLLDG-----------VPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLE---DHLLSR---VPTPLAWIARLK 205
+ HPN++K ED+E +V EL L H + +P W ++
Sbjct: 89 LNHPNVIKYYASFIEDNELN----IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
+ L ++H +++ RD K +N+ + KL D GL R +
Sbjct: 145 LCS----ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHS 195
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
Y +PE + KSD+WS G +LYE+
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 107/272 (39%), Gaps = 45/272 (16%)
Query: 80 AELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSK-LDVAIKQLNRQGFQG 138
AEL + ++ I G +G V GV DS+ + VAIK++ G
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGV-------------DSEGIPVAIKRVFNTVSDG 61
Query: 139 H-----------KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHN--- 183
K + E+ L HPN++ L +E M +L LV ELM
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 184 KSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA 243
+ + D + P + + + GL LHE ++ RD NILL ++
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILL-----GLHVLHEA---GVVHRDLHPGNILLADNNDI 173
Query: 244 KLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITG 302
+ DF LAR+ + Y APE V Q T D+WS G V+ E+
Sbjct: 174 TICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-N 229
Query: 303 RRAVERNLPRNEQ--KLLEWV-RPYVSDSKKF 331
R+A+ R Q K++E V P + D F
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 107/272 (39%), Gaps = 45/272 (16%)
Query: 80 AELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSK-LDVAIKQLNRQGFQG 138
AEL + ++ I G +G V GV DS+ + VAIK++ G
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGV-------------DSEGIPVAIKRVFNTVSDG 61
Query: 139 H-----------KEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHN--- 183
K + E+ L HPN++ L +E M +L LV ELM
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 184 KSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA 243
+ + D + P + + + GL LHE ++ RD NILL ++
Sbjct: 122 QVIHDQRIVISPQHIQYFMYHILL-----GLHVLHEA---GVVHRDLHPGNILLADNNDI 173
Query: 244 KLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITG 302
+ DF LAR+ + Y APE V Q T D+WS G V+ E+
Sbjct: 174 TICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-N 229
Query: 303 RRAVERNLPRNEQ--KLLEWV-RPYVSDSKKF 331
R+A+ R Q K++E V P + D F
Sbjct: 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMF 261
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 126 VAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKS 185
+A+KQ+ R G + + I + L VV + + C + ELM +
Sbjct: 53 IAVKQMRRSGNKEENKRI--LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCA 110
Query: 186 LEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKL 245
+ + P P + ++ +A + L YL E+ +I RD K SNILLDE + KL
Sbjct: 111 EKLKKRMQGPIPERILGKMTVA--IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKL 166
Query: 246 SDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTA-----KSDVWSFGVVLYELI 300
DFG++ + + Y APE + T ++DVWS G+ L EL
Sbjct: 167 CDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 301 TGR 303
TG+
Sbjct: 224 TGQ 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 36/231 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
+G+G +G V+RG + +VA+K + + K W E V
Sbjct: 16 VGKGRYGEVWRGSWQGE-------------NVAVKIFSSRD---EKSWFRETELYNTVML 59
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + Q L+ SL D+L T L ++ L+I A
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIAS 116
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ + ++D GLA L
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 266 XXXXXXYAAPEYV-QTGRLTA-----KSDVWSFGVVLYELITGRRAVERNL 310
Y APE + +T ++ + D+W+FG+VL+E+ RR V +
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGI 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L ++HPN++ L E E +L+ EL+ L D L + L
Sbjct: 64 EVSILKEIQHPNVITL----HEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH Q+ D K NI LLD + + K+ DFGLA + G
Sbjct: 118 EFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFG 171
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 97/236 (41%), Gaps = 43/236 (18%)
Query: 81 ELKSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDV-AIKQLNRQGFQGH 139
+L+ + +IG G FG V Q H S V A+K L++ F+
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV------------QLVRHKSTRKVYAMKLLSK--FEMI 108
Query: 140 KE-----WINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV 194
K + E + + P +V+L Y +DD +V E M L +L+S
Sbjct: 109 KRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNY 163
Query: 195 PTPLAW----IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
P W A + +A DA + ++H RD K N+LLD+ KL+DFG
Sbjct: 164 DVPEKWARFYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGT 214
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQT----GRLTAKSDVWSFGVVLYELITG 302
+ EG+ Y +PE +++ G + D WS GV LYE++ G
Sbjct: 215 CMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---- 200
E + + P +V+L Y +DD +V E M L +L+S P W
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNYDVPEKWARFY 178
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
A + +A DA + ++H RD K N+LLD+ KL+DFG + EG+
Sbjct: 179 TAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 261 HXXXXXXXXXXYAAPEYVQT----GRLTAKSDVWSFGVVLYELITG 302
Y +PE +++ G + D WS GV LYE++ G
Sbjct: 230 R-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAW---- 200
E + + P +V+L Y +DD +V E M L +L+S P W
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNYDVPEKWARFY 178
Query: 201 IARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLG 260
A + +A DA + ++H RD K N+LLD+ KL+DFG + EG+
Sbjct: 179 TAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 261 HXXXXXXXXXXYAAPEYVQT----GRLTAKSDVWSFGVVLYELITG 302
Y +PE +++ G + D WS GV LYE++ G
Sbjct: 230 R-CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 37 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 82
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 137
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 138 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 191
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT------GRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 251
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 252 EFMKKLQPTVRTYVENRPKY 271
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 46/237 (19%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F LIG GGFG V++ R+ D K V + R + K EV
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRI----------DGKTYV----IRRVKYNNEKAE-REVKA 58
Query: 149 LGVVKHPNLVKLVG------YCAEDDERGMQR-------------------LLVYELMHN 183
L + H N+V G Y E + ++ + E
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 184 KSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA 243
+LE + R L + L++ + +G+ Y+H + +LI RD K SNI L + +
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQV 175
Query: 244 KLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
K+ DFGL +G Y +PE + + + D+++ G++L EL+
Sbjct: 176 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G+G F V R V H+T+G L+ A K +N + ++ E +
Sbjct: 37 LGKGAFSVVRRCV-------HKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+HPN+V+L E+ LV++L+ L + +++R A + Q
Sbjct: 86 QHPNIVRLHDSIQEES----FHYLVFDLVTGGELFEDIVAREFYSEADASHC--IQQILE 139
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+AY H ++ R+ K N+LL K KL+DFGLA + H
Sbjct: 140 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG- 195
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ + D+W+ GV+LY L+ G
Sbjct: 196 --YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 46/259 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNR--QGFQGHKEWINEVNFLG 150
IG G G V + +D+ L+ VAIK+L+R Q K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 151 VVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
V H N++ L+ E +V ELM + +L + L +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLLY 133
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVV 187
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT------GRRAVER----------NLPR 312
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA 247
Query: 313 NEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 248 FMKKLQPTVRNYVENRPKY 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 99/259 (38%), Gaps = 46/259 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNR--QGFQGHKEWINEVNFLG 150
IG G G V + +D+ L+ VAIK+L+R Q K E+ +
Sbjct: 32 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 151 VVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
V H N++ L+ E +V ELM + +L + L +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLLY 133
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX 268
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 134 QMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVV 187
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT------GRRAVER----------NLPR 312
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 313 NEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 248 FMKKLQPTVRTYVENRPKY 266
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLD--VAIKQLNRQGFQGH---KEWINEVNFL 149
IG G G V + +D+ L+ VAIK+L+R FQ K E+ +
Sbjct: 26 IGSGAQGIV-------------CAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLM 71
Query: 150 GVVKHPNLVKLVGYCAEDD--ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA 207
V H N++ L+ E +V ELM + +L + L +
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLL 126
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
G+ +LH +I RD K SNI++ D K+ DFGLAR G
Sbjct: 127 YQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYV 180
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT------GRRAVER----------NLP 311
Y APE + D+WS G ++ E++ GR +++ P
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 312 RNEQKLLEWVRPYVSDSKKF 331
+KL VR YV + K+
Sbjct: 241 EFMKKLQPTVRTYVENRPKY 260
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
+G+G F V R V + + ++ A K +N + H++ E ++
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEY-----------AAKIINTKKLSARDHQKLEREARICRLL 87
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KHPN+V+L +E+ G LV++L+ L + +++R + + + +
Sbjct: 88 KHPNIVRLHDSISEE---GFH-YLVFDLVTGGELFEDIVAR-----EYYSEADASHCIHQ 138
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
L ++ ++ RD K N+LL K KL+DFGLA + +G
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGEQQAWFGFAGT 196
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EVN L ++HPN++ L E +L+ EL+ L D L + L
Sbjct: 58 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEK--ESLTEDEAT 111
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH + ++ D K NI LLD++ + KL DFG+A + G
Sbjct: 112 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---G 165
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EVN L ++HPN++ L E +L+ EL+ L D L + L
Sbjct: 65 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEK--ESLTEDEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH + ++ D K NI LLD++ + KL DFG+A + G
Sbjct: 119 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXX 271
+GL Y+H ++ RD K N+ ++ED + K+ DFGLAR E G+
Sbjct: 155 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY-----VVTRW 206
Query: 272 YAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
Y APE + + D+WS G ++ E++TG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 89 FSRALLIGEGGFGCV----------YRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQ 137
F ++G+G FG V Y + ++ + + S S++ + + LN Q +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-MLLASLNHQYVVR 66
Query: 138 GHKEWINEVNFL----GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ W+ NF+ V K L + YC E G +Y+L+H+++L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYC----ENGT----LYDLIHSENLNQQ---- 114
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
W ++ + L+Y+H + +I RD K NI +DE K+ DFGLA+
Sbjct: 115 --RDEYW----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 253 ------------QGPPEGLGHXXXXXXXXXXYAAPEYVQ-TGRLTAKSDVWSFGVVLYEL 299
Q P G Y A E + TG K D++S G++ +E+
Sbjct: 166 VHRSLDILKLDSQNLP-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 300 I 300
I
Sbjct: 225 I 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EVN L ++HPN++ L E +L+ EL+ L D L + L
Sbjct: 79 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEK--ESLTEDEAT 132
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ + G+ YLH + ++ D K NI LLD++ + KL DFG+A + G
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA---G 186
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ + APE V L ++D+WS GV+ Y L++G
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 193 RVPTPLA--WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
R+P +A ++A + IA D+ L Y+H RD K NIL+D + +L+DFG
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGS 221
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQT-----GRLTAKSDVWSFGVVLYELITG 302
+ +G Y +PE +Q GR + D WS GV +YE++ G
Sbjct: 222 CLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G+G F V R V H+T+G L+ A K +N + ++ E +
Sbjct: 13 LGKGAFSVVRRCV-------HKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+HPN+V+L E+ LV++L+ L + +++R A + Q
Sbjct: 62 QHPNIVRLHDSIQEES----FHYLVFDLVTGGELFEDIVAREFYSEADASHC--IQQILE 115
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+AY H ++ R+ K N+LL K KL+DFGLA + H
Sbjct: 116 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG- 171
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ + D+W+ GV+LY L+ G
Sbjct: 172 --YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G+G F V R V H+T+G L+ A K +N + ++ E +
Sbjct: 14 LGKGAFSVVRRCV-------HKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+HPN+V+L E+ LV++L+ L + +++R A + Q
Sbjct: 63 QHPNIVRLHDSIQEES----FHYLVFDLVTGGELFEDIVAREFYSEADASHC--IQQILE 116
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+AY H ++ R+ K N+LL K KL+DFGLA + H
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG- 172
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ + D+W+ GV+LY L+ G
Sbjct: 173 --YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 17/184 (9%)
Query: 124 LDVAIKQLNRQGFQGH---KEWINEVNFLGVVKHPNLVKLVGYCAEDD--ERGMQRLLVY 178
++VA+K+L+R FQ K E+ L V H N++ L+ E LV
Sbjct: 48 INVAVKKLSR-PFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 179 ELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD 238
ELM + +L + L + G+ +LH +I RD K SNI++
Sbjct: 107 ELM-----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 158
Query: 239 EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYE 298
D K+ DFGLAR Y APE + D+WS G ++ E
Sbjct: 159 SDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 299 LITG 302
L+ G
Sbjct: 216 LVKG 219
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 93 LLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV 152
+++G+G +G VY G +++ +AIK++ + + + E+ +
Sbjct: 28 VVLGKGTYGIVYAG-----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL 76
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK------- 205
KH N+V+ +G +E+ G ++ + E + SL L S+ W LK
Sbjct: 77 KHKNIVQYLGSFSEN---GFIKIFM-EQVPGGSLSALLRSK------W-GPLKDNEQTIG 125
Query: 206 -IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA--KLSDFGLARQGPPEGLGHX 262
+ GL YLH D Q++ RD K N+L++ Y K+SDFG +++ G+
Sbjct: 126 FYTKQILEGLKYLH---DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPC 179
Query: 263 XXXXXXXXXYAAPEYVQTGR--LTAKSDVWSFGVVLYELITGR 303
Y APE + G +D+WS G + E+ TG+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGH--KEWINEVNFLGVV 152
+G+G F V R V H+T+G L+ A K +N + ++ E +
Sbjct: 14 LGKGAFSVVRRCV-------HKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+HPN+V+L E+ LV++L+ L + +++R A + Q
Sbjct: 63 QHPNIVRLHDSIQEES----FHYLVFDLVTGGELFEDIVAREFYSEADASHC--IQQILE 116
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+AY H ++ R+ K N+LL K KL+DFGLA + H
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG- 172
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ + D+W+ GV+LY L+ G
Sbjct: 173 --YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 52/241 (21%)
Query: 89 FSRALLIGEGGFGCV----------YRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ-GFQ 137
F ++G+G FG V Y + ++ + + S S++ + + LN Q +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-MLLASLNHQYVVR 66
Query: 138 GHKEWINEVNFL----GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ W+ NF+ V K L + YC + +Y+L+H+++L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYC--------ENRTLYDLIHSENLNQQ---- 114
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
W ++ + L+Y+H + +I RD K NI +DE K+ DFGLA+
Sbjct: 115 --RDEYW----RLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 253 ------------QGPPEGLGHXXXXXXXXXXYAAPEYVQ-TGRLTAKSDVWSFGVVLYEL 299
Q P G Y A E + TG K D++S G++ +E+
Sbjct: 166 VHRSLDILKLDSQNLP-GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 300 I 300
I
Sbjct: 225 I 225
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 42/238 (17%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGV 151
LIG G +G VY + ++ +VAIK++NR + K + E+ L
Sbjct: 35 LIGRGSYGYVYLAYDK-----------NANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+K +++L +D L + + + L+ L + P L I +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK--LFKTPIFLTEQHVKTILYNLL 141
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ------------------ 253
G ++HE +I RD K +N LL++D K+ DFGLAR
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 254 ----GP-PEGLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELITGRRA 305
GP + L Y APE + T D+WS G + EL+ ++
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
FS +IG GGFG VY G + D+ A+K L+++ QG +NE
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKA----------DTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARL 204
L +V + +V C +L + +LM+ L HL A +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA----RQGPPEGLG 260
A + GL ++H +++RD K +NILLDE ++SD GLA ++ P +G
Sbjct: 297 -YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 261 HXXXXXXXXXXYAAPEYVQTG-RLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKL 317
Y APE +Q G + +D +S G +L++L+ G ++ +++ ++
Sbjct: 353 --------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
+G+G F V R V ++ ++ A K +N + H++ E ++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEY-----------AAKIINTKKLSARDHQKLEREARICRLL 78
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KHPN+V+L +E+ L+++L+ L + +++R A + Q
Sbjct: 79 KHPNIVRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREYYSEADASH--CIQQILE 132
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+ + H+ ++ RD K N+LL K KL+DFGLA + EG
Sbjct: 133 AVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGT 187
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDD-ERGMQRLLVYELMHNKSLEDHLLSR-VPTPLAWI 201
NE+ L +KH N+V L ED E LV +L+ L D +L R V T
Sbjct: 55 NEIAVLKKIKHENIVTL-----EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKD-- 107
Query: 202 ARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEG 258
A L I Q + YLHE ++ RD K N+L +E+ K ++DFGL++ E
Sbjct: 108 ASLVI-QQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQ 160
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLL 318
G Y APE + + D WS GV+ Y L+ G E KL
Sbjct: 161 NG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE---ETESKLF 216
Query: 319 EWVR 322
E ++
Sbjct: 217 EKIK 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
FS +IG GGFG VY G + D+ A+K L+++ QG +NE
Sbjct: 190 FSVHRIIGRGGFGEVY-GCRKA----------DTGKMYAMKCLDKKRIKMKQGETLALNE 238
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARL 204
L +V + +V C +L + +LM+ L HL A +
Sbjct: 239 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 295
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA----RQGPPEGLG 260
A + GL ++H +++RD K +NILLDE ++SD GLA ++ P +G
Sbjct: 296 -YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 351
Query: 261 HXXXXXXXXXXYAAPEYVQTG-RLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKL 317
Y APE +Q G + +D +S G +L++L+ G ++ +++ ++
Sbjct: 352 --------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
FS +IG GGFG VY G + D+ A+K L+++ QG +NE
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKA----------DTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARL 204
L +V + +V C +L + +LM+ L HL A +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA----RQGPPEGLG 260
A + GL ++H +++RD K +NILLDE ++SD GLA ++ P +G
Sbjct: 297 -YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 261 HXXXXXXXXXXYAAPEYVQTG-RLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKL 317
Y APE +Q G + +D +S G +L++L+ G ++ +++ ++
Sbjct: 353 --------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 93 LLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV 152
+++G+G +G VY G +++ +AIK++ + + + E+ +
Sbjct: 14 VVLGKGTYGIVYAG-----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL 62
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK------- 205
KH N+V+ +G +E+ G ++ + E + SL L S+ W LK
Sbjct: 63 KHKNIVQYLGSFSEN---GFIKIFM-EQVPGGSLSALLRSK------W-GPLKDNEQTIG 111
Query: 206 -IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA--KLSDFGLARQGPPEGLGHX 262
+ GL YLH D Q++ RD K N+L++ Y K+SDFG +++ G+
Sbjct: 112 FYTKQILEGLKYLH---DNQIVHRDIKGDNVLINT-YSGVLKISDFGTSKR--LAGINPC 165
Query: 263 XXXXXXXXXYAAPEYVQTGR--LTAKSDVWSFGVVLYELITGR 303
Y APE + G +D+WS G + E+ TG+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF---QGHKEWINE 145
FS +IG GGFG VY G + D+ A+K L+++ QG +NE
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKA----------DTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 146 VNFLGVVKHPNLVKLVGYCAEDDERGMQRL-LVYELMHNKSLEDHLLSRVPTPLAWIARL 204
L +V + +V C +L + +LM+ L HL A +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF- 296
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA----RQGPPEGLG 260
A + GL ++H +++RD K +NILLDE ++SD GLA ++ P +G
Sbjct: 297 -YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
Query: 261 HXXXXXXXXXXYAAPEYVQTG-RLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKL 317
Y APE +Q G + +D +S G +L++L+ G ++ +++ ++
Sbjct: 353 --------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 105/264 (39%), Gaps = 45/264 (17%)
Query: 125 DVAIKQLNRQGFQGHK--EWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMH 182
D+ +K L + + K ++ E L + HPN++ ++G C L+
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITHWXP 92
Query: 183 NKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYK 242
SL + L + +K A D ARG A+LH ++ + + ++ +DED
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXT 151
Query: 243 AKLS--DFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQ-----TGRLTAKSDVWSFGVV 295
A++S D + Q P + APE +Q T R +A D WSF V+
Sbjct: 152 ARISXADVKFSFQSP---------GRXYAPAWVAPEALQKKPEDTNRRSA--DXWSFAVL 200
Query: 296 LYELITGRRAVERNLPRNE---QKLLEWVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXX 352
L+EL+T R +L E + LE +RP + H+
Sbjct: 201 LWELVT-REVPFADLSNXEIGXKVALEGLRPTIPPGISPHV------------------S 241
Query: 353 XXXXXCLTKQPKSRPKMSEVVDIL 376
C + P RPK +V IL
Sbjct: 242 KLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL--NRQGFQGHKEWINEVNFLGVV 152
IGEG +G V++ D+ VAIK+ + K + E+ L +
Sbjct: 11 IGEGSYGVVFK-----------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL 59
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KHPNLV L+ E R + LV+E + L H L R + I +
Sbjct: 60 KHPNLVNLL----EVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQ 113
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR--QGPPEGLGHXXXXXXXXX 270
+ + H+ I RD K NIL+ + KL DFG AR GP +
Sbjct: 114 AVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD----YYDDEVATR 166
Query: 271 XYAAPE-YVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE V + DVW+ G V EL++G
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G F V R V ++ ++ + + + K+L+ + H++ E ++KH
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEY------AAMIINTKKLSARD---HQKLEREARICRLLKH 69
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
PN+V+L +E+ L+++L+ L + +++R A + Q +
Sbjct: 70 PNIVRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREYYSEADASHC--IQQILEAV 123
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXXXX 271
+ H+ ++ R+ K N+LL K KL+DFGLA + EG
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPG 178
Query: 272 YAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINE 145
F L+GEG +G V S H+ +G VAIK++ ++ F + E
Sbjct: 13 FQLKSLLGEGAYGVV-------CSATHKPTGEI----VAIKKIEPFDKPLFALRT--LRE 59
Query: 146 VNFLGVVKHPNLVKLVGYCAEDD-ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
+ L KH N++ + D E + ++ ELM L RV I+
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRV------ISTQ 107
Query: 205 KIAQD--------AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---- 252
++ D R + LH +I RD K SN+L++ + K+ DFGLAR
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 253 ----QGPPEGLGHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
P G Y APE + T + + DVWS G +L EL R
Sbjct: 165 SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 20/215 (9%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQ--GFQGHKEWINEVNFLGVV 152
IG G +G V SS + +G VAIK++ K + E+ L
Sbjct: 62 IGNGAYGVV-------SSARRRLTGQQ----VAIKKIPNAFDVVTNAKRTLRELKILKHF 110
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KH N++ + G + VY ++ + H + PL R
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKS-VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ--GPPEGLGHXXXXXXXXX 270
GL Y+H Q+I RD K SN+L++E+ + K+ DFG+AR P +
Sbjct: 170 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 271 XYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGRR 304
Y APE + + T D+WS G + E++ R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 93/236 (39%), Gaps = 49/236 (20%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINE 145
F L+GEG +G V S H+ +G VAIK++ ++ F + E
Sbjct: 13 FQLKSLLGEGAYGVV-------CSATHKPTGEI----VAIKKIEPFDKPLFALRT--LRE 59
Query: 146 VNFLGVVKHPNLVKLVGYCAEDD-ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
+ L KH N++ + D E + ++ ELM L RV I+
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRV------ISTQ 107
Query: 205 KIAQD--------AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---- 252
++ D R + LH +I RD K SN+L++ + K+ DFGLAR
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 253 ----QGPPEGLGHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
P G Y APE + T + + DVWS G +L EL R
Sbjct: 165 SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G GG G V+ V +D VAIK++ Q K + E+ + + H
Sbjct: 19 LGCGGNGLVFSAV-----------DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH 67
Query: 155 PNLVKLV------GYCAEDDERGMQRL----LVYELMHNKSLEDHLLSRVPTPLAWIARL 204
N+VK+ G DD + L +V E M ++L + P L ARL
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL--ANVLEQGPL-LEEHARL 124
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-EDYKAKLSDFGLARQGPPE--GLGH 261
+ Q RGL Y+H ++ RD K +N+ ++ ED K+ DFGLAR P GH
Sbjct: 125 FMYQ-LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 262 XXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ + T D+W+ G + E++TG+
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 93/236 (39%), Gaps = 49/236 (20%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINE 145
F L+GEG +G V S H+ +G VAIK++ ++ F + E
Sbjct: 13 FQLKSLLGEGAYGVV-------CSATHKPTGEI----VAIKKIEPFDKPLFALRT--LRE 59
Query: 146 VNFLGVVKHPNLVKLVGYCAEDD-ERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
+ L KH N++ + D E + ++ ELM L RV I+
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRV------ISTQ 107
Query: 205 KIAQD--------AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---- 252
++ D R + LH +I RD K SN+L++ + K+ DFGLAR
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
Query: 253 ----QGPPEGLGHXXXXXXXXXXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGR 303
P G Y APE + T + + DVWS G +L EL R
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ--GPPEGLGHXXXXXXXX 269
RGL Y+H Q+I RD K SN+L++E+ + K+ DFG+AR P +
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 270 XXYAAPEYVQT-GRLTAKSDVWSFGVVLYELITGRR 304
Y APE + + T D+WS G + E++ R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 139 HKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDH-----LLSR 193
+ ++ NE+ + +K+ + G DE ++YE M N S+ +L +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEV----YIIYEYMENDSILKFDEYFFVLDK 142
Query: 194 VPTPLAWIARLK-IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR 252
T I +K I + +Y+H E + + RD K SNIL+D++ + KLSDFG +
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 253 QGPPEGLGHXXXXXXXXXXYAAPEYV--QTGRLTAKSDVWSFGVVLY 297
+ + + PE+ ++ AK D+WS G+ LY
Sbjct: 201 YMVDKKIK----GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F + G+G FG V G +++G + VAIK++ + ++E + +
Sbjct: 25 FQVERMAGQGTFGTVQLG-------KEKSTG----MSVAIKKVIQDPRFRNRE-LQIMQD 72
Query: 149 LGVVKHPNLVKLVGY---CAEDDERGMQRLLVYELMHN---KSLEDHLLSRVPTPLAWIA 202
L V+ HPN+V+L Y E D R + +V E + + + ++ +V P I
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 203 RLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE-DYKAKLSDFGLARQGPPEGLGH 261
R + LH + RD K N+L++E D KL DFG A++ P
Sbjct: 133 VFLF--QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP---SE 186
Query: 262 XXXXXXXXXXYAAPEYV-QTGRLTAKSDVWSFGVVLYELITG 302
Y APE + T D+WS G + E++ G
Sbjct: 187 PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 122 SKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM 181
+++ A K++ + + + E+ + + HPN+++L E E LV EL
Sbjct: 33 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY----ETFEDNTDIYLVMELC 88
Query: 182 HNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---D 238
L + ++ + + AR I +D +AY H+ + RD K N L
Sbjct: 89 TGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDS 143
Query: 239 EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYE 298
D KL DFGLA + P G Y +P+ ++ G + D WS GV++Y
Sbjct: 144 PDSPLKLIDFGLAARFKP---GKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYV 199
Query: 299 LITG 302
L+ G
Sbjct: 200 LLCG 203
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 61/254 (24%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKL--DVAIKQLNRQGFQGHKEWINEVNFLGVV 152
IG+G +G VVRV+ ++ + K+ I+Q+N + + K EV + +
Sbjct: 34 IGQGSYG-----VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK---TEVRLMKKL 85
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL-----------------LSRVP 195
HPN+ +L Y +DE+ + LV EL H L D L P
Sbjct: 86 HHPNIARL--YEVYEDEQYI--CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 196 TP-----------------LAWIARLKIAQDAAR----GLAYLHEEMDFQLIFRDFKTSN 234
P L ++ R K+ + R L YLH + + RD K N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPEN 198
Query: 235 ILL--DEDYKAKLSDFGLARQ--GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLT--AKSD 288
L ++ ++ KL DFGL+++ G + + APE + T + K D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 289 VWSFGVVLYELITG 302
WS GV+L+ L+ G
Sbjct: 259 AWSAGVLLHLLLMG 272
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 122 SKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELM 181
+++ A K++ + + + E+ + + HPN+++L E E LV EL
Sbjct: 50 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY----ETFEDNTDIYLVMELC 105
Query: 182 HNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---D 238
L + ++ + + AR I +D +AY H+ + RD K N L
Sbjct: 106 TGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDS 160
Query: 239 EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYE 298
D KL DFGLA + P G Y +P+ ++ G + D WS GV++Y
Sbjct: 161 PDSPLKLIDFGLAARFKP---GKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYV 216
Query: 299 LITG 302
L+ G
Sbjct: 217 LLCG 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HPN++KL E E + LV EL+ L D ++ + + +
Sbjct: 97 TEIGVLLRLSHPNIIKL----KEIFETPTEISLVLELVTGGELFDRIVEK-----GYYSE 147
Query: 204 LKIAQDAAR----GLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPP 256
+ A DA + +AYLHE ++ RD K N+L D K++DFGL++
Sbjct: 148 -RDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203
Query: 257 EGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ L Y APE ++ + D+WS G++ Y L+ G
Sbjct: 204 QVL---MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 38/258 (14%)
Query: 83 KSATRGFSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF-QGHKE 141
K F ++G G +G V+ +VR + SGHD+ A+K L + Q K
Sbjct: 50 KVGIENFELLKVLGTGAYGKVF--LVR------KISGHDTGKLYAMKVLKKATIVQKAKT 101
Query: 142 WINEVNFLGVVKH----PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRV--- 194
+ V++H P LV L + A E + +L Y ++ L HL R
Sbjct: 102 TEHTRTERQVLEHIRQSPFLVTL--HYAFQTETKLHLILDY--INGGELFTHLSQRERFT 157
Query: 195 -PTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ 253
++ + +A L +LH+ +I+RD K NILLD + L+DFGL+++
Sbjct: 158 EHEVQIYVGEIVLA------LEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208
Query: 254 GPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDV--WSFGVVLYELITGRRAVERNLP 311
+ Y AP+ V+ G V WS GV++YEL+TG +
Sbjct: 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
Query: 312 RNEQ-----KLLEWVRPY 324
+N Q ++L+ PY
Sbjct: 268 KNSQAEISRRILKSEPPY 285
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 12 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 55
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 56 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 112
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 50 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 93
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 150
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 11 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 54
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 111
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 37 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 80
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 81 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 137
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 133 RQGFQGHKEWINEVNFLGVVKH-PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLL 191
R+G E ++E+ L + K P ++ L E E + +L+ E + L
Sbjct: 66 RRGQDCRAEILHEIAVLELAKSCPRVINL----HEVYENTSEIILILEYAAGGEIFSLCL 121
Query: 192 SRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYK---AKLSDF 248
+ ++ +++ + G+ YLH+ ++ D K NILL Y K+ DF
Sbjct: 122 PELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178
Query: 249 GLARQGPPEGLGHXXX--XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELIT 301
G++R+ +GH Y APE + +T +D+W+ G++ Y L+T
Sbjct: 179 GMSRK-----IGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+HPN++ L DD G +V ELM L D +L + + + +
Sbjct: 74 QHPNIITLKD--VYDD--GKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITK 127
Query: 213 GLAYLHEEMDFQLIFRDFKTSNIL-LDED---YKAKLSDFGLARQGPPE-GLGHXXXXXX 267
+ YLH + ++ RD K SNIL +DE ++ DFG A+Q E GL
Sbjct: 128 TVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LMTPC 181
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE ++ A D+WS GV+LY ++TG
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 33/214 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+R D QT A+K++ + F+ + E+ +
Sbjct: 66 VGRGSFGEVHR------MKDKQTG-----FQCAVKKVRLEVFR-----VEELVACAGLSS 109
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAAR 212
P +V L G E G + EL+ SL + + +P A L A
Sbjct: 110 PRIVPLYGAVRE----GPWVNIFMELLEGGSLGQLIKQMGCLPEDRA----LYYLGQALE 161
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDED-YKAKLSDFGLARQGPPEGLGHXXXXX---XX 268
GL YLH +++ D K N+LL D +A L DFG A P+GLG
Sbjct: 162 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V AK D+WS ++ ++ G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 37/221 (16%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
++G GGFG V+ ++ + + + K + R+G+QG + E L V
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKK-----RLKKRKGYQGA---MVEKKILAKV- 242
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLS--------RVPTPLAWIARLK 205
H + + Y E LV +M+ + H+ + + P + + A++
Sbjct: 243 HSRFIVSLAYAFETK---TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI- 298
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA---RQGPPEGLGHX 262
GL +LH+ +I+RD K N+LLD+D ++SD GLA + G + G+
Sbjct: 299 -----VSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY- 349
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE + D ++ GV LYE+I R
Sbjct: 350 ----AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA---RQGPPEGLGHXXXXXXXX 269
GL +LH+ +I+RD K N+LLD+D ++SD GLA + G + G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGT 352
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE + D ++ GV LYE+I R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 17 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 60
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 61 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 117
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVV-- 152
IG+G FG V+RG R +VA+K + + + W E V
Sbjct: 14 IGKGRFGEVWRGKWRGE-------------EVAVKIFSSRE---ERSWFREAEIYQTVML 57
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+H N++ + +D+ Q LV + + SL D+L T I K+A A
Sbjct: 58 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI---KLALSTAS 114
Query: 213 GLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLA--RQGPPEGLGHXXXX 265
GLA+LH E+ + RD K+ NIL+ ++ ++D GLA + +
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 266 XXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
Y APE + ++D+++ G+V +E+
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA---RQGPPEGLGHXXXXXXXX 269
GL +LH+ +I+RD K N+LLD+D ++SD GLA + G + G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGT 352
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE + D ++ GV LYE+I R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLA---RQGPPEGLGHXXXXXXXX 269
GL +LH+ +I+RD K N+LLD+D ++SD GLA + G + G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGT 352
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGR 303
+ APE + D ++ GV LYE+I R
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 33/214 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+R D QT A+K++ + F+ + E+ +
Sbjct: 82 VGRGSFGEVHR------MKDKQTG-----FQCAVKKVRLEVFR-----VEELVACAGLSS 125
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAAR 212
P +V L G E G + EL+ SL + + +P A L A
Sbjct: 126 PRIVPLYGAVRE----GPWVNIFMELLEGGSLGQLIKQMGCLPEDRA----LYYLGQALE 177
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDED-YKAKLSDFGLARQGPPEGLGHXXXXX---XX 268
GL YLH +++ D K N+LL D +A L DFG A P+GLG
Sbjct: 178 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V AK D+WS ++ ++ G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 175 LLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSN 234
L++ E M L + R +I +D + +LH + RD K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 139
Query: 235 ILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWS 291
+L ++D KL+DFG A++ L Y APE + + D+WS
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 292 FGVVLYELITG 302
GV++Y L+ G
Sbjct: 196 LGVIMYILLCG 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 24/216 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG+G F V R + R +T + V + + ++ E + ++K
Sbjct: 31 VIGKGPFSVVRRCINR------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HP++V+L+ + D GM +V+E M L ++ R ++ +A R
Sbjct: 85 HPHIVELLETYSSD---GML-YMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQ 138
Query: 213 ---GLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
L Y H D +I RD K +LL + KL FG+A Q GL
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGR 193
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V+ DVW GV+L+ L++G
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
IG+G F V R V +GH+ A K +N + H++ E ++
Sbjct: 12 IGKGAFSVVRRCV-------KLCTGHE----YAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KH N+V+L +E+ G LV++L+ L + +++R A + Q
Sbjct: 61 KHSNIVRLHDSISEE---GFH-YLVFDLVTGGELFEDIVAREYYSEADASH--CIQQILE 114
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXXXXXX 269
+ + H+ ++ RD K N+LL K KL+DFGLA + +G
Sbjct: 115 AVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGDQQAWFGFAGT 169
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 193 RVPTPLA--WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
++P +A +I + +A D+ L Y+H RD K N+LLD + +L+DFG
Sbjct: 171 KLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGS 221
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQT-----GRLTAKSDVWSFGVVLYELITGR 303
+ +G Y +PE +Q G+ + D WS GV +YE++ G
Sbjct: 222 CLKMNDDGTVQ-SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 24/216 (11%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
+IG+G F V R + R +T + V + + ++ E + ++K
Sbjct: 33 VIGKGPFSVVRRCINR------ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR- 212
HP++V+L+ + D GM +V+E M L ++ R ++ +A R
Sbjct: 87 HPHIVELLETYSSD---GML-YMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQ 140
Query: 213 ---GLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
L Y H D +I RD K +LL + KL FG+A Q GL
Sbjct: 141 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGR 195
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V+ DVW GV+L+ L++G
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 175 LLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSN 234
L++ E M L + R +I +D + +LH + RD K N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 158
Query: 235 ILL---DEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWS 291
+L ++D KL+DFG A++ L Y APE + + D+WS
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 292 FGVVLYELITG 302
GV++Y L+ G
Sbjct: 215 LGVIMYILLCG 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 33/214 (15%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G FG V+R D QT A+K++ + F+ + E+ +
Sbjct: 80 LGRGSFGEVHR------MKDKQTG-----FQCAVKKVRLEVFR-----VEELVACAGLSS 123
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAAR 212
P +V L G E G + EL+ SL + + +P A L A
Sbjct: 124 PRIVPLYGAVRE----GPWVNIFMELLEGGSLGQLIKQMGCLPEDRA----LYYLGQALE 175
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDED-YKAKLSDFGLARQGPPEGLGHXXXXX---XX 268
GL YLH +++ D K N+LL D +A L DFG A P+GLG
Sbjct: 176 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 269 XXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V AK D+WS ++ ++ G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 63/294 (21%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWIN------EVN 147
L+G+GGFG V+ G H+ + +L VAIK + R G + EV
Sbjct: 38 LLGKGGFGTVFAG--------HRLT---DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 148 FLGVVK----HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
L V HP +++L+ + E E M L++ + + L D++ + P +R
Sbjct: 87 LLWKVGAGGGHPGVIRLLDW-FETQEGFM--LVLERPLPAQDLFDYITEKGPLGEG-PSR 142
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-EDYKAKLSDFGLARQGPPEGLGHX 262
Q A + + H ++ RD K NIL+D AKL DFG L H
Sbjct: 143 CFFGQVVA-AIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSG------ALLHD 192
Query: 263 XXXXX--XXXXYAAPEYVQTGRLTA-KSDVWSFGVVLYELITGRRAVERNLPRNEQKLLE 319
Y+ PE++ + A + VWS G++LY+++ G ER+ Q++LE
Sbjct: 193 EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-----QEILE 247
Query: 320 WVRPYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
E ++ CL +P SRP + E++
Sbjct: 248 -------------------AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 193 RVPTPLA--WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGL 250
++P +A +I + +A D+ L Y+H RD K N+LLD + +L+DFG
Sbjct: 187 KLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGS 237
Query: 251 ARQGPPEGLGHXXXXXXXXXXYAAPEYVQT-----GRLTAKSDVWSFGVVLYELITGR 303
+ +G Y +PE +Q G+ + D WS GV +YE++ G
Sbjct: 238 CLKMNDDGTVQ-SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
+G+G F V R + + ++ A K +N + H++ E ++
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEY-----------AAKIINTKKLSARDHQKLEREARICRLL 60
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KHPN+V+L +E+ G LV++L+ L + +++R DA+
Sbjct: 61 KHPNIVRLHDSISEE---GFH-YLVFDLVTGGELFEDIVAR---------EYYSEADASH 107
Query: 213 GLAYLHEEMDF----QLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXX 265
+ + E ++ ++ RD K N+LL K KL+DFGLA + +G
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFG 165
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 274 APEYVQTGRLTAKS-----------DVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ + ++ DVWS G +LY + G+ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 269
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 270 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG VY+ ++ A K + + + +++I E+ L H
Sbjct: 27 LGDGAFGKVYKA-----------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 75
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P +VKL+G D + ++ E ++ D ++ + L + + L
Sbjct: 76 PYIVKLLGAYYHDG----KLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+LH + ++I RD K N+L+ + +L+DFG++ + + A
Sbjct: 131 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMA 185
Query: 275 PEYV--QTGRLTA---KSDVWSFGVVLYEL 299
PE V +T + T K+D+WS G+ L E+
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 225
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 226 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 221
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 222 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 241
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 242 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G+G FG VY+ ++ A K + + + +++I E+ L H
Sbjct: 19 LGDGAFGKVYKA-----------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH 67
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGL 214
P +VKL+G D + ++ E ++ D ++ + L + + L
Sbjct: 68 PYIVKLLGAYYHDG----KLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 215 AYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAA 274
+LH + ++I RD K N+L+ + +L+DFG++ + + A
Sbjct: 123 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMA 177
Query: 275 PEYV--QTGRLTA---KSDVWSFGVVLYEL 299
PE V +T + T K+D+WS G+ L E+
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKE---WINEVNFLGV 151
+G+G +G V++ + R + + VA+K++ FQ + E+ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEV-----------VAVKKI-FDAFQNSTDAQRTFREIMILTE 64
Query: 152 VK-HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
+ H N+V L+ D++R + LV++ M + H + R L + + +
Sbjct: 65 LSGHENIVNLLNVLRADNDRDV--YLVFDYMET---DLHAVIRANI-LEPVHKQYVVYQL 118
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR---------QGPPEGLGH 261
+ + YLH L+ RD K SNILL+ + K++DFGL+R P +
Sbjct: 119 IKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 262 XXXX----------XXXXXXYAAPEY-VQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + + + T D+WS G +L E++ G+
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 269
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 270 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQG--HKEWINEVNFLGVV 152
+G+G F V R + + ++ A K +N + H++ E ++
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEY-----------AAKIINTKKLSARDHQKLEREARICRLL 60
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
KHPN+V+L +E+ G LV++L+ L + +++R DA+
Sbjct: 61 KHPNIVRLHDSISEE---GFH-YLVFDLVTGGELFEDIVAR---------EYYSEADASH 107
Query: 213 GLAYLHEEMDF----QLIFRDFKTSNILLDEDYKA---KLSDFGLARQGPPEGLGHXXXX 265
+ + E ++ ++ RD K N+LL K KL+DFGLA + +G
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFG 165
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE ++ D+W+ GV+LY L+ G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V HPN++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHPNIITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 222
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 223 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 52/241 (21%)
Query: 89 FSRALLIGEGGFGCV----------YRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGF-Q 137
F ++G+G FG V Y + ++ + + S S++ + + LN Q +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXL-LASLNHQYVVR 66
Query: 138 GHKEWINEVNFL----GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSR 193
+ W+ NF+ V K L YC + +Y+L+H+++L
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYC--------ENRTLYDLIHSENLNQQ---- 114
Query: 194 VPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLAR- 252
W ++ + L+Y+H + +I R+ K NI +DE K+ DFGLA+
Sbjct: 115 --RDEYW----RLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 253 ------------QGPPEGLGHXXXXXXXXXXYAAPEYVQ-TGRLTAKSDVWSFGVVLYEL 299
Q P G Y A E + TG K D +S G++ +E
Sbjct: 166 VHRSLDILKLDSQNLP-GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX 224
Query: 300 I 300
I
Sbjct: 225 I 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 274 APEYVQ-----------TGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ +++ KSDVWS G +LY + G+ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 269
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 270 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 90 SRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFL 149
+ L +G G FG V+R +D QT A+K++ + F+ E+
Sbjct: 96 THQLRLGRGSFGEVHR------MEDKQTG-----FQCAVKKVRLEVFRA-----EELMAC 139
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+ P +V L G E G + EL+ SL L + L L
Sbjct: 140 AGLTSPRIVPLYGAVRE----GPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQ 193
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDED-YKAKLSDFGLARQGPPEGLGHXXXXX-- 266
A GL YLH +++ D K N+LL D A L DFG A P+GLG
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 267 -XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V AK DVWS ++ ++ G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK---IAQD 209
+HPN++ L DD G LV ELM L D +L + + + + +
Sbjct: 79 QHPNIITLKD--VYDD--GKHVYLVTELMRGGELLDKILRQ-----KFFSEREASFVLHT 129
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNIL-LDEDYKA---KLSDFGLARQGPPE-GLGHXXX 264
+ + YLH + ++ RD K SNIL +DE ++ DFG A+Q E GL
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LM 183
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE ++ D+WS G++LY ++ G
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK---IAQD 209
+HPN++ L DD G LV ELM L D +L + + + + +
Sbjct: 79 QHPNIITLKD--VYDD--GKHVYLVTELMRGGELLDKILRQ-----KFFSEREASFVLHT 129
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNIL-LDEDYKA---KLSDFGLARQGPPE-GLGHXXX 264
+ + YLH + ++ RD K SNIL +DE ++ DFG A+Q E GL
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL---LM 183
Query: 265 XXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE ++ D+WS G++LY ++ G
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNF 148
F R +G G +G V++ VR S D +L + ++ F+G K+ ++
Sbjct: 59 FQRLSRLGHGSYGEVFK--VR--------SKEDGRLYAVKRSMSP--FRGPKDRARKLAE 106
Query: 149 LG----VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
+G V +HP V+L + E G L EL SL+ H AW A L
Sbjct: 107 VGSHEKVGQHPCCVRL----EQAWEEGGILYLQTELC-GPSLQQHCE-------AWGASL 154
Query: 205 KIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
AQ D LA+LH + L+ D K +NI L + KL DFGL + G
Sbjct: 155 PEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
G Y APE +Q G +DV+S G+ + E+
Sbjct: 212 AGE---VQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 38/234 (16%)
Query: 89 FSRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL---NRQGFQGHKEWINE 145
F +G GGFG V+ +V DD + AIK++ NR+ ++ + E
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKV--DD---------CNYAIKRIRLPNRE--LAREKVMRE 53
Query: 146 VNFLGVVKHPNLVK-----LVGYCAEDDERGMQRLLVY---ELMHNKSLEDHLLSRVPTP 197
V L ++HP +V+ L E + ++ +Y +L ++L+D + R
Sbjct: 54 VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 198 -LAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG-- 254
L I A + +LH + L+ RD K SNI D K+ DFGL
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 255 --------PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
P Y +PE + + K D++S G++L+EL+
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 27/171 (15%)
Query: 214 LAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYA 273
L +H ++ D K +N L+ D KL DFG+A Q P+ Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 274 APEYVQTGRLTAKS-----------DVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR 322
PE ++ + ++ DVWS G +LY + G+ ++
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 241
Query: 323 PYVSDSKKFHLIIDPRLEGNYCIXXXXXXXXXXXXCLTKQPKSRPKMSEVV 373
++ K H IIDP E + CL + PK R + E++
Sbjct: 242 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
+G+G FG VY + R + + L V K QL ++G + + E+ ++
Sbjct: 22 LGKGKFGNVY--LAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLRREIEIQSHLR 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVY----ELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
HPN++++ Y D + + +L + EL K L+ H ++ L
Sbjct: 73 HPNILRMYNYF--HDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEEL----- 123
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A L Y HE ++I RD K N+L+ + K++DFG + P
Sbjct: 124 -ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGT 175
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y PE ++ K D+W GV+ YE + G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
+G+G FG VY + R + + L V K QL ++G + + E+ ++
Sbjct: 23 LGKGKFGNVY--LAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLRREIEIQSHLR 73
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVY----ELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
HPN++++ Y D + + +L + EL K L+ H ++ L
Sbjct: 74 HPNILRMYNYF--HDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEEL----- 124
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A L Y HE ++I RD K N+L+ + K++DFG + P
Sbjct: 125 -ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGT 176
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y PE ++ K D+W GV+ YE + G
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 31/213 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
+G+G FG VY + R + + L V K QL ++G + + E+ ++
Sbjct: 22 LGKGKFGNVY--LAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLRREIEIQSHLR 72
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVY----ELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
HPN++++ Y D + + +L + EL K L+ H R + ++
Sbjct: 73 HPNILRMYNYF--HDRKRIYLMLEFAPRGELY--KELQKH--GRFDEQRSAT----FMEE 122
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXX 269
A L Y HE ++I RD K N+L+ + K++DFG + P
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGT 175
Query: 270 XXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y PE ++ K D+W GV+ YE + G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 90 SRALLIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFL 149
+ L +G G FG V+R +D QT A+K++ + F+ E+
Sbjct: 77 THQLRLGRGSFGEVHR------MEDKQTG-----FQCAVKKVRLEVFRA-----EELMAC 120
Query: 150 GVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQD 209
+ P +V L G E G + EL+ SL L + L L
Sbjct: 121 AGLTSPRIVPLYGAVRE----GPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQ 174
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLDED-YKAKLSDFGLARQGPPEGLGHXXXXX-- 266
A GL YLH +++ D K N+LL D A L DFG A P+GLG
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 267 -XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V AK DVWS ++ ++ G
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 39/222 (17%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIK-QLNRQGFQGHKEWINEVNFLGVVK 153
+G+G FG VY + S L V K Q+ ++G + + E+ +
Sbjct: 31 LGKGKFGNVYLA-------REKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLH 81
Query: 154 HPNLVKLVGYCAEDDERGMQRLLVY--------ELMHNKSLEDHLLSRVPTPLAWIARLK 205
HPN+++L Y D R + +L Y EL + + ++ R T
Sbjct: 82 HPNILRLYNYFY--DRRRIYLILEYAPRGELYKELQKSCTFDE---QRTAT--------- 127
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
I ++ A L Y H + ++I RD K N+LL + K++DFG + P
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKT 180
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVE 307
Y PE ++ K D+W GV+ YEL+ G E
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ A +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEA-TCK 242
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLG 260
L Q + YLHE +I RD K N+LL +ED K++DFG ++ G
Sbjct: 243 LYFYQ-MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGET 295
Query: 261 HXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V T D WS GV+L+ ++G
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
E+ L ++H N+++LV ++++ M ++ Y + + + D + + R
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---------RF 106
Query: 205 KIAQDAAR------GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEG 258
+ Q GL YLH + ++ +D K N+LL K+S G+A P
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 259 LGHXXXXXXXXXXYAAPEYVQTGRLTA---KSDVWSFGVVLYELITGRRAVERNLPRNEQ 315
+ PE + G T K D+WS GV LY + TG E + N
Sbjct: 164 ADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD---NIY 219
Query: 316 KLLE 319
KL E
Sbjct: 220 KLFE 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ A +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEA-TCK 256
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQGPPEGLG 260
L Q + YLHE +I RD K N+LL +ED K++DFG ++ G
Sbjct: 257 LYFYQ-MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGET 309
Query: 261 HXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
Y APE V T D WS GV+L+ ++G
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 84/220 (38%), Gaps = 26/220 (11%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+GEGGF Y +V D H A+K++ Q +E E + + H
Sbjct: 37 LGEGGFS--YVDLVEGLHDGH---------FYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 155 PNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHL--LSRVPTPLAWIARLKIAQDAAR 212
PN+++LV YC + + L+ +L + + L L L + R
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXX---- 268
GL +H + RD K +NILL ++ + L D G Q G
Sbjct: 146 GLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 269 ---XXXYAAPEYVQTGR---LTAKSDVWSFGVVLYELITG 302
Y APE + ++DVWS G VLY ++ G
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGN--------KR 110
Query: 204 LKIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQG 254
LK A + YLHE +I RD K N+LL +ED K++DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 255 PPEGLGHXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE V T D WS GV+L+ ++G
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ R
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGN--------KR 109
Query: 204 LKIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQG 254
LK A + YLHE +I RD K N+LL +ED K++DFG ++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
Query: 255 PPEGLGHXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE V T D WS GV+L+ ++G
Sbjct: 167 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGN--------KR 110
Query: 204 LKIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQG 254
LK A + YLHE +I RD K N+LL +ED K++DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 255 PPEGLGHXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE V T D WS GV+L+ ++G
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGN--------KR 110
Query: 204 LKIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQG 254
LK A + YLHE +I RD K N+LL +ED K++DFG ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 255 PPEGLGHXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE V T D WS GV+L+ ++G
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 144 NEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIAR 203
E+ L + HP ++K+ + +D +V ELM L D ++ R
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGN--------KR 116
Query: 204 LKIAQ------DAARGLAYLHEEMDFQLIFRDFKTSNILL---DEDYKAKLSDFGLARQG 254
LK A + YLHE +I RD K N+LL +ED K++DFG ++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 172
Query: 255 PPEGLGHXXXXXXXXXXYAAPEY---VQTGRLTAKSDVWSFGVVLYELITG 302
G Y APE V T D WS GV+L+ ++G
Sbjct: 173 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 44/236 (18%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNR--QGFQGHKEWINEVNFLGV 151
LIG G +G V ++ K VAIK++ R + K + E+ L
Sbjct: 60 LIGTGSYGHVCEAYDKLE-----------KRVVAIKKILRVFEDLIDCKRILREIAILNR 108
Query: 152 VKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAA 211
+ H ++VK++ D L V + + + L R P L + + +
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK--LFRTPVYLTELHIKTLLYNLL 166
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-------------GPPE- 257
G+ Y+H ++ RD K +N L+++D K+ DFGLAR P E
Sbjct: 167 VGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRED 223
Query: 258 -----------GLGHXXXXXXXXXXYAAPEYVQTGR-LTAKSDVWSFGVVLYELIT 301
L Y APE + T DVWS G + EL+
Sbjct: 224 DMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
KIA + L +LH ++ +I RD K SN+L++ + K+ DFG++ G+
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS--------GYLVD 206
Query: 265 XXXXX-----XXYAAPEYV-----QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + Q G + KSD+WS G+ + EL R
Sbjct: 207 SVAKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILR 254
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNIL-LDEDYKA---KLSDFGLARQGPPE-GLGHXXXX 265
+ + YLH + ++ RD K SNIL +DE ++ DFG A+Q E GL
Sbjct: 126 TKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL---LXT 179
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE ++ A D+WS GV+LY +TG
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 34/187 (18%)
Query: 142 WINEVNFLGVV--KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLA 199
W E V +H N++ + + Q L+ + N SL D+L S T L
Sbjct: 76 WFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLD 132
Query: 200 WIARLKIAQDAARGLAYLHEEM-----DFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG 254
+ LK+A + GL +LH E+ + RD K+ NIL+ ++ ++D GLA +
Sbjct: 133 AKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192
Query: 255 ---------PPEGLGHXXXXXXXXXXYAAPEYVQTG------RLTAKSDVWSFGVVLYEL 299
PP Y PE + + +D++SFG++L+E+
Sbjct: 193 ISDTNEVDIPPN-------TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
Query: 300 ITGRRAV 306
RR V
Sbjct: 246 --ARRCV 250
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXX 265
Q G++Y H Q+ RD K N LLD + K+ DFG ++ L
Sbjct: 123 QQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKS 176
Query: 266 XXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLLEWVRP 323
Y APE + K +DVWS GV LY ++ G E PR+ +K ++ +
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL- 235
Query: 324 YVSDSKKFHLIIDPRLEGNYC 344
S K+ + D R+ C
Sbjct: 236 ----SVKYSIPDDIRISPECC 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 147 NFLGVVKHPNLVKLVGYCAEDDERG-MQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLK 205
FL V HP++V++ + D G +V E + +SL+ ++P A L+
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLE 190
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXX 265
I L+YLH L++ D K NI+L E+ + KL D G + G+
Sbjct: 191 ILP----ALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR--INSFGY---- 236
Query: 266 XXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYEL 299
+ APE V+TG T +D+++ G L L
Sbjct: 237 LYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL----NRQGFQGHKEWINEVNFLG 150
IGEG +G V++ R + H+ VA+K++ + +G + E+ L
Sbjct: 10 IGEGTYGTVFKAKNR---ETHEI--------VALKRVRLDDDDEGVPSSA--LREICLLK 56
Query: 151 VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
+KH N+V+L D + LV+E ++ L+ + S I + + Q
Sbjct: 57 ELKHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ-L 110
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXX 269
+GL + H ++ RD K N+L++ + + KL+DFGLAR G P
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---RCYSAEVVT 164
Query: 270 XXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y P+ + +L + S D+WS G + EL R +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 176 LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNI 235
LV+E M S+ H+ R + + QD A L +LH + + RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENI 142
Query: 236 LLDEDYKA---KLSDFGLARQ----------GPPEGLGHXXXXXXXXXXYAAPEYVQTGR 282
L + + K+ DFGL PE L Y APE V+
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL-----TPCGSAEYMAPEVVEAFS 197
Query: 283 LTA-----KSDVWSFGVVLYELITG 302
A + D+WS GV+LY L++G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
KIA + L +LH ++ +I RD K SN+L++ + K+ DFG++ G+
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS--------GYLVD 162
Query: 265 XXXX-----XXXYAAPEYV-----QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + Q G + KSD+WS G+ + EL R
Sbjct: 163 DVAKDIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILR 210
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 40/246 (16%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWI--NEVNFLGVV 152
+G G FG V+R V +TS + + +K +G + + E++ L +
Sbjct: 13 LGRGEFGIVHRCV--------ETSSKKTYMAKFVK------VKGTDQVLVKKEISILNIA 58
Query: 153 KHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIA---QD 209
+H N++ L E E + ++++E + + R+ T + +I
Sbjct: 59 RHRNILHL----HESFESMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQ 110
Query: 210 AARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXXXX 267
L +LH + D + NI+ K+ +FG ARQ P G
Sbjct: 111 VCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLF 164
Query: 268 XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVR--PYV 325
Y APE Q ++ +D+WS G ++Y L++G + L Q+++E + Y
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG---INPFLAETNQQIIENIMNAEYT 221
Query: 326 SDSKKF 331
D + F
Sbjct: 222 FDEEAF 227
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 228 RDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKS 287
RD K NIL+ D A L DFG+A E L Y APE T ++
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLY-YXAPERFSESHATYRA 216
Query: 288 DVWSFGVVLYELITG 302
D+++ VLYE +TG
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 217
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 178
Query: 262 XXXXXX-XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 173
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 172
Query: 262 XXXXXXXXX-XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 171
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 223
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 177
Query: 262 XXXXXX-XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 173
Query: 262 XXXXXXXXX-XYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXX 265
Q G++Y H Q+ RD K N LLD + K+ DFG ++ L
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKS 175
Query: 266 XXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLLEWV 321
Y APE + K +DVWS GV LY ++ G E P+N +K + +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 179
Query: 262 XXXXXX-XXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 171
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 187
Query: 262 XXXXXXXXXXY-AAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D+WS GV++Y L+ G
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXX 265
Q G++Y H Q+ RD K N LLD + K+ DFG ++ L
Sbjct: 121 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS---VLHSQPKS 174
Query: 266 XXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLLEWV 321
Y APE + K +DVWS GV LY ++ G E P+N +K + +
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V H N++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V H N++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V H N++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V H N++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 145 EVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARL 204
EV+ L V H N++ L E +L+ EL+ L D L + L+
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEAT 118
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNI-LLDEDY---KAKLSDFGLARQGPPEGLG 260
+ G+ YLH + ++ D K NI LLD++ KL DFGLA + G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---G 172
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
+ APE V L ++D+WS GV+ Y L++G
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXX 265
Q G++Y H Q+ RD K N LLD + K++DFG ++ L
Sbjct: 122 QQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKAS---VLHSQPKS 175
Query: 266 XXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLLEWV 321
Y APE + K +DVWS GV LY ++ G E P+N +K + +
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL----NRQGFQGHKEWINEVNFLG 150
IGEG +G V++ R + H+ VA+K++ + +G + E+ L
Sbjct: 10 IGEGTYGTVFKAKNR---ETHEI--------VALKRVRLDDDDEGVPSSA--LREICLLK 56
Query: 151 VVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDA 210
+KH N+V+L D + LV+E ++ L+ + S I + + Q
Sbjct: 57 ELKHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ-L 110
Query: 211 ARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQ-GPPEGLGHXXXXXXXX 269
+GL + H ++ RD K N+L++ + + KL++FGLAR G P
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---RCYSAEVVT 164
Query: 270 XXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITGRRAV 306
Y P+ + +L + S D+WS G + EL R +
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 37/174 (21%)
Query: 154 HPNLVKLVGYCAEDDERGMQ------RLLVYELMHNKSLEDH--LLSRVPTPLAWIARLK 205
HPN+++ YC+E +R + L + +L+ +K++ D L + P++ + ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-------------EDYKAKLSDFGLAR 252
A G+A+LH ++I RD K NIL+ E+ + +SDFGL +
Sbjct: 143 -----ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 253 Q--GPPEGLGHXXXXXXXXXXYAAPEYVQTG---RLTAKSDVWSFGVVLYELIT 301
+ + APE ++ RLT D++S G V Y +++
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 37/174 (21%)
Query: 154 HPNLVKLVGYCAEDDERGMQ------RLLVYELMHNKSLEDH--LLSRVPTPLAWIARLK 205
HPN+++ YC+E +R + L + +L+ +K++ D L + P++ + ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-------------EDYKAKLSDFGLAR 252
A G+A+LH ++I RD K NIL+ E+ + +SDFGL +
Sbjct: 143 -----ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 253 Q--GPPEGLGHXXXXXXXXXXYAAPEYVQTG---RLTAKSDVWSFGVVLYELIT 301
+ + APE ++ RLT D++S G V Y +++
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVK 153
L+GEG + V +G V + + + A+K + +Q EV L +
Sbjct: 20 LLGEGAYAKV-QGAVSLQNGK----------EYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 154 -HPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAAR 212
+ N+++L+ + EDD R LV+E + S+ H+ + +R + +D A
Sbjct: 69 GNKNILELIEF-FEDDTR---FYLVFEKLQGGSILAHIQKQKHFNEREASR--VVRDVAA 122
Query: 213 GLAYLHEEMDFQLIFRDFKTSNILLDEDYKA---KLSDFGLARQ----------GPPEGL 259
L +LH + + RD K NIL + K K+ DF L PE
Sbjct: 123 ALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE-- 177
Query: 260 GHXXXXXXXXXXYAAPEYVQ--TGRLT---AKSDVWSFGVVLYELITG 302
Y APE V+ T + T + D+WS GVVLY +++G
Sbjct: 178 ---LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 176 LVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNI 235
LV+E M S+ H+ R + + QD A L +LH + + RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENI 142
Query: 236 LLDEDYKA---KLSDFGLARQ----------GPPEGLGHXXXXXXXXXXYAAPEYVQTGR 282
L + + K+ DF L PE L Y APE V+
Sbjct: 143 LCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL-----TPCGSAEYMAPEVVEAFS 197
Query: 283 LTA-----KSDVWSFGVVLYELITG 302
A + D+WS GV+LY L++G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 41/178 (23%)
Query: 154 HPNLVKLVGYCAEDDERGMQ------RLLVYELMHNKSLEDH--LLSRVPTPLAWIARLK 205
HPN+++ YC+E +R + L + +L+ +K++ D L + P++ + ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-------------EDYKAKLSDFGLAR 252
A G+A+LH ++I RD K NIL+ E+ + +SDFGL +
Sbjct: 125 -----ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 253 Q--GPPEGLGHXXXXXXXXXXYAAPEYVQTG-------RLTAKSDVWSFGVVLYELIT 301
+ + APE ++ RLT D++S G V Y +++
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 30/221 (13%)
Query: 95 IGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQLNRQGFQGHKEWINEVNFLGVVKH 154
+G G +G VY+ + D A+KQ+ G E+ L +KH
Sbjct: 29 VGRGTYGHVYKAKRKDGK---------DDKDYALKQIEGTGIS--MSACREIALLRELKH 77
Query: 155 PNLVKLVGYCAEDDERGMQRLLVY---ELMHNKSLEDHLLSRV---PTPLAWIARLKIAQ 208
PN++ L +R + L Y +L H ++ H S+ P L +
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWH--IIKFHRASKANKKPVQLPRGMVKSLLY 135
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILL----DEDYKAKLSDFGLAR--QGPPEGLGHX 262
G+ YLH ++ RD K +NIL+ E + K++D G AR P + L
Sbjct: 136 QILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA-D 191
Query: 263 XXXXXXXXXYAAPEYVQTGRLTAKS-DVWSFGVVLYELITG 302
Y APE + R K+ D+W+ G + EL+T
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGPPEGLGHXXX 264
KIA + L +LH ++ +I RD K SN+L++ + K DFG++ G+
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGIS--------GYLVD 189
Query: 265 XXXX-----XXXYAAPEYV-----QTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + Q G + KSD+WS G+ EL R
Sbjct: 190 DVAKDIDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILR 237
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 205 KIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDE---DYKAKLSDFGLARQGPPEGLGH 261
+I + + YLH + RD K N+L + KL+DFG A+ E H
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 217
Query: 262 XX-XXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y APE + + D WS GV+ Y L+ G
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 204 LKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQG--------- 254
L I A + +LH + L+ RD K SNI D K+ DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 255 -PPEGLGHXXXXXXXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELI 300
P Y +PE + + K D++S G++L+EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 138 GHKEWINEVNFLGVVKHPNLVKLVGYCAEDDERGMQRLLVYELMHNKSLEDHLLSRVPTP 197
G + WI +++F + N + LV M+ + +L+ +L R+P
Sbjct: 118 GDRRWITQLHF--AFQDENYLYLV----------MEYYVGGDLL---TLLSKFGERIPAE 162
Query: 198 LA--WIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKAKLSDFGLARQGP 255
+A ++A + +A D+ L Y+H RD K NILLD +L+DFG +
Sbjct: 163 MARFYLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLR 213
Query: 256 PEGLGHXXXXXXXXXXYAAPEYVQT-------GRLTAKSDVWSFGVVLYELITGR 303
+G Y +PE +Q G + D W+ GV YE+ G+
Sbjct: 214 ADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 41/178 (23%)
Query: 154 HPNLVKLVGYCAEDDERGMQ------RLLVYELMHNKSLEDH--LLSRVPTPLAWIARLK 205
HPN+++ YC+E +R + L + +L+ +K++ D L + P++ + ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 206 IAQDAARGLAYLHEEMDFQLIFRDFKTSNILLD-------------EDYKAKLSDFGLAR 252
A G+A+LH ++I RD K NIL+ E+ + +SDFGL +
Sbjct: 125 -----ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 253 Q--GPPEGLGHXXXXXXXXXXYAAPEYVQTG-------RLTAKSDVWSFGVVLYELIT 301
+ + APE ++ RLT D++S G V Y +++
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQGPPEGLGHXXXX 265
Q G++Y H Q+ RD K N LLD + K+ FG ++ L
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSS---VLHSQPKS 175
Query: 266 XXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLLEWV 321
Y APE + K +DVWS GV LY ++ G E P+N +K + +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVV 152
LIG+G FG V + RV + VAIK + N++ F + EV L ++
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEW-----------VAIKIIKNKKAFLNQAQI--EVRLLELM 88
Query: 153 -KHPNLVKLVGYCAEDDERGMQR---LLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
KH +K Y M R LV+E++ + +L D L + ++ K AQ
Sbjct: 89 NKHDTEMKY--YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA--KLSDFGLARQGPPEGLGHXXXXX 266
L +L + +I D K NILL ++ K+ DFG + Q LG
Sbjct: 146 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ-----LGQRIYQX 199
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + D+WS G +L E+ TG
Sbjct: 200 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVV 152
LIG+G FG V + RV + VAIK + N++ F + EV L ++
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEW-----------VAIKIIKNKKAFLNQAQI--EVRLLELM 107
Query: 153 -KHPNLVKLVGYCAEDDERGMQR---LLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
KH +K Y M R LV+E++ + +L D L + ++ K AQ
Sbjct: 108 NKHDTEMKY--YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILLDEDYKA--KLSDFGLARQGPPEGLGHXXXXX 266
L +L + +I D K NILL ++ K+ DFG + Q LG
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ-----LGQRIYQX 218
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + D+WS G +L E+ TG
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 208 QDAARGLAYLHEEMDFQLIFRDFKTSNILLD--EDYKAKLSDFGLARQG-----PPEGLG 260
Q G++Y H Q+ RD K N LLD + K+ FG ++ P + +G
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVG 178
Query: 261 HXXXXXXXXXXYAAPEYVQTGRLTAK-SDVWSFGVVLYELITGRRAVE-RNLPRNEQKLL 318
Y APE + K +DVWS GV LY ++ G E P+N +K +
Sbjct: 179 --------TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
Query: 319 EWV 321
+
Sbjct: 231 HRI 233
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 212 RGLAYLHEEMDFQLIFRDFKTSNILLD-EDYKAKLSDFGLARQGPPEGLGHXXXXXXXXX 270
R + ++H + RD K N+L++ +D KL DFG A++ P
Sbjct: 152 RAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP---SEPSVAXICSR 205
Query: 271 XYAAPE-YVQTGRLTAKSDVWSFGVVLYELITGR 303
Y APE + T D+WS G V ELI G+
Sbjct: 206 FYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 94 LIGEGGFGCVYRGVVRVSSDDHQTSGHDSKLDVAIKQL-NRQGFQGHKEWINEVNFLGVV 152
LIG+G FG V + RV + VAIK + N++ F + EV L ++
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEW-----------VAIKIIKNKKAFLNQAQI--EVRLLELM 107
Query: 153 -KHPNLVKLVGYCAEDDERGMQR---LLVYELMHNKSLEDHLLSRVPTPLAWIARLKIAQ 208
KH +K Y M R LV+E++ + +L D L + ++ K AQ
Sbjct: 108 NKHDTEMKY--YIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 209 DAARGLAYLHEEMDFQLIFRDFKTSNILL--DEDYKAKLSDFGLARQGPPEGLGHXXXXX 266
L +L + +I D K NILL + K+ DFG + Q LG
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQ-----LGQRIYQX 218
Query: 267 XXXXXYAAPEYVQTGRLTAKSDVWSFGVVLYELITG 302
Y +PE + D+WS G +L E+ TG
Sbjct: 219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,282,508
Number of Sequences: 62578
Number of extensions: 410255
Number of successful extensions: 3378
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 956
Number of HSP's gapped (non-prelim): 1149
length of query: 453
length of database: 14,973,337
effective HSP length: 102
effective length of query: 351
effective length of database: 8,590,381
effective search space: 3015223731
effective search space used: 3015223731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)