Your job contains 1 sequence.
>043572
MAESRPKSRTLVEPLSQFDLSHYSRSSPIRSLSISPISDCQVLIYIGTQSGSLILLSLDP
TAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKVLLLFCDQCLFLTDSLLT
QPLKKLGFLKGISVIAKRIRTSDSESTNLLENNSVSSLANASTSTGQRLLQKFGSGIKAN
GVKVKEEEQHCRGDNVFAVIIGKRLVLIELVNGSFVILKEIQCMDGVKTMVWLNDSIIVG
TVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGGS
LVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEECGAGK
LLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKEMLSFVHAQIG
FLLLFDLHFEEAVDHFLHSETMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPVPVEDV
VDNGLMAIQRAIFLRKAGVETAVDDGFLSNPPSRAELLELAIRNITRYLEVSRKKELTIL
VKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLAFLYASKGMS
SKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILEESSDEDLIL
QHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDT
QFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIFLQSS
DLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEIGRPDA
YMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTILRMLR
ARLHHHRQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGTKLFAMYPD
DTIVCYKCYRRQGESTSITGRDFKKDVLIKPGWLVTR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043572
(997 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:2447427 - symbol:Tgfbrap1 "transforming growth fa... 262 3.5e-32 4
UNIPROTKB|Q8WUH2 - symbol:TGFBRAP1 "Transforming growth f... 274 3.0e-31 3
UNIPROTKB|I3LIP2 - symbol:TGFBRAP1 "Uncharacterized prote... 273 6.5e-30 4
UNIPROTKB|F1P4R5 - symbol:TGFBRAP1 "Uncharacterized prote... 232 9.6e-29 4
UNIPROTKB|F1MWF9 - symbol:TGFBRAP1 "Transforming growth f... 257 4.2e-27 3
ZFIN|ZDB-GENE-070410-66 - symbol:tgfbrap1 "transforming g... 252 4.6e-27 3
UNIPROTKB|A7MB11 - symbol:TGFBRAP1 "Transforming growth f... 261 1.0e-26 3
DICTYBASE|DDB_G0279169 - symbol:vps39 "citron-like domain... 267 1.0e-26 4
UNIPROTKB|E2RKZ9 - symbol:TGFBRAP1 "Uncharacterized prote... 234 4.9e-26 3
DICTYBASE|DDB_G0277663 - symbol:DDB_G0277663 "Transformin... 155 1.3e-23 5
RGD|1310772 - symbol:Tgfbrap1 "transforming growth factor... 216 1.1e-21 3
ASPGD|ASPL0000003032 - symbol:avaB species:162425 "Emeric... 135 3.6e-16 5
UNIPROTKB|E2RRH8 - symbol:VPS39 "Uncharacterized protein"... 121 3.8e-14 4
TAIR|locus:2115355 - symbol:EMB2754 "EMBRYO DEFECTIVE 275... 153 4.5e-13 2
MGI|MGI:2443189 - symbol:Vps39 "vacuolar protein sorting ... 114 5.2e-13 4
UNIPROTKB|E2RG39 - symbol:VPS39 "Uncharacterized protein"... 121 7.0e-13 4
WB|WBGene00011625 - symbol:vps-39 species:6239 "Caenorhab... 122 9.0e-13 4
FB|FBgn0038593 - symbol:CG7146 species:7227 "Drosophila m... 166 1.5e-12 4
ZFIN|ZDB-GENE-080530-2 - symbol:vps39 "vacuolar protein s... 160 1.1e-11 3
POMBASE|SPAC23H4.14 - symbol:vam6 "guanyl-nucleotide exch... 166 7.7e-11 3
UNIPROTKB|E1BX81 - symbol:VPS39 "Uncharacterized protein"... 141 1.4e-10 3
UNIPROTKB|E9PT04 - symbol:Vps39 "Protein Vps39" species:1... 111 1.9e-10 4
UNIPROTKB|Q96JC1 - symbol:VPS39 "Vam6/Vps39-like protein"... 123 2.9e-10 3
UNIPROTKB|F1NID0 - symbol:VPS39 "Uncharacterized protein"... 141 5.8e-10 3
UNIPROTKB|F1SFK5 - symbol:VPS39 "Uncharacterized protein"... 126 1.4e-09 3
UNIPROTKB|E1BM41 - symbol:VPS39 "Uncharacterized protein"... 125 5.5e-09 3
DICTYBASE|DDB_G0291510 - symbol:DDB_G0291510 "putative Ra... 139 2.7e-05 1
>MGI|MGI:2447427 [details] [associations]
symbol:Tgfbrap1 "transforming growth factor, beta receptor
associated protein 1" species:10090 "Mus musculus" [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0005160
"transforming growth factor beta receptor binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0046332
"SMAD binding" evidence=ISO] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 MGI:MGI:2447427
GO:GO:0005737 GO:GO:0007165 GO:GO:0006886 GO:GO:0016020
GO:GO:0006355 GO:GO:0016192 GO:GO:0005083 EMBL:CH466589
InterPro:IPR019453 Pfam:PF10367 CTD:9392 eggNOG:NOG254275
HOGENOM:HOG000007291 HOVERGEN:HBG108563 OrthoDB:EOG4GTKC8
InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI EMBL:AK051333
EMBL:AK141742 EMBL:AK159332 EMBL:BC138866 EMBL:BC138867
IPI:IPI00222627 IPI:IPI00754904 RefSeq:NP_001013043.1
UniGene:Mm.246069 ProteinModelPortal:Q3UR70 STRING:Q3UR70
PhosphoSite:Q3UR70 PaxDb:Q3UR70 PRIDE:Q3UR70
Ensembl:ENSMUST00000095014 GeneID:73122 KEGG:mmu:73122
UCSC:uc007ave.1 UCSC:uc007avh.1 GeneTree:ENSGT00530000063596
InParanoid:Q3UR70 ChiTaRS:TGFBRAP1 NextBio:337509 Bgee:Q3UR70
Genevestigator:Q3UR70 Uniprot:Q3UR70
Length = 860
Score = 262 (97.3 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 84/325 (25%), Positives = 152/325 (46%)
Query: 655 DEDLILQHLGWIADINAVLAVKVLTS----EKRINQLSPDKVIAAIDSKKVEILQRYLQW 710
D++L+ H W+ + + V++ T E++ +PD +I+++ K + L +YL+
Sbjct: 538 DQELVWTHADWLLQKSEEIGVQIFTKRPLDEQQQTSFNPDNIISSL-KKYPKALVKYLEH 596
Query: 711 LIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQ 770
L+ D+ ++HT A+ + EE + + S+G GK+ + Q
Sbjct: 597 LVIDRRLQKEEYHTHLAI--------LYLEEV--------LRQRVSTG-GKD-VEATETQ 638
Query: 771 ERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQ 830
+L+ LQ SDLY + + ++G+ L +E AIL+ KLG+ L IL ++ D AAE
Sbjct: 639 AKLRRLLQKSDLYRVHLLKEKVQGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAED 698
Query: 831 YC--AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLS 883
YC + G+ A Q LL MYL + + + AAV LL++H D QVL+ L
Sbjct: 699 YCLWSSEGQGAACRQRLFHTLLAMYLRAGPSAQDLTVAAVDLLNHHAREFDVTQVLQLLP 758
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+QL + Q+ L+++ ++ +++ + V++++ LC
Sbjct: 759 DTWSVQLLCPFLMGAMRDSIHARRTTQVALGLAKSENLIYMYDKMKLKGNAVRLSERELC 818
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKC 968
C G +F YP+ +V C
Sbjct: 819 QLCQNPFGEPVFVRYPNGGLVHTHC 843
Score = 118 (46.6 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 69/303 (22%), Positives = 123/303 (40%)
Query: 160 NASTSTGQRLLQKFGSGIKANGVKV-KEEEQHCRGD----NVFAVIIGKRLVLIELVNGS 214
N+ T L+ SG + G E GD V + + +R V + LV
Sbjct: 97 NSITLVNMLNLEPVPSGARIKGATTFAVNESPVNGDPFCVEVCIISVKRRTVQMFLVYED 156
Query: 215 FV-ILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLL 273
V I+KE+ + + + + Y + + TG S +F PP++K +
Sbjct: 157 RVQIVKEVSTPEQPLAVAVDGYFLCLALTTQYIILNYSTGLSQDLFPYCSEEKPPIVKRI 216
Query: 274 SKEQKVLLLVDNVGVFVDAHGQPVGGSLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSG 333
+++ +L +G+F G + + ++ YV+ L + ++
Sbjct: 217 GRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQ 276
Query: 334 ICVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKE 393
Q + F EG I D E G++ +VAT V +P E+QI+DLL + +E
Sbjct: 277 QQKQTLPFK-EGH---ILQDFE---GRV-IVATSKGVYILVPLPLEKQIQDLLANRRVEE 328
Query: 394 AISLAE--ELECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSEVFP 449
A+ LA+ E + M + Q GF+ L F EA + F S+ + ++P
Sbjct: 329 ALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSSQLDVRELISLYP 388
Query: 450 FIM 452
F++
Sbjct: 389 FLL 391
Score = 96 (38.9 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 35/137 (25%), Positives = 64/137 (46%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +EN C++ + L
Sbjct: 426 RFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENFCLLTDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMS---G 638
++ L LY + A+ +W N +G +D + +DL + D ++
Sbjct: 484 EKHKKYFALGLLYHYNKQDASAVQLWV----NIVNGDIQD-STRSDLYEYIVDFLTYCLD 538
Query: 639 REVAATEASKILEESSD 655
+E+ T A +L++S +
Sbjct: 539 QELVWTHADWLLQKSEE 555
Score = 57 (25.1 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ PT T T +H+ F K PV +
Sbjct: 33 CGRNLYVGTNDCFIYHFLLEEKAMPTGTATFVA--TKQLHRHLGFKK-------PVNELC 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD + L + L +P+ +KG + A
Sbjct: 84 AASALNRLLVL-CDNSITLVNMLNLEPVPSGARIKGATTFA 123
>UNIPROTKB|Q8WUH2 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9606 "Homo sapiens"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005160 "transforming growth factor
beta receptor binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 GO:GO:0005737 GO:GO:0006886 GO:GO:0016020
GO:GO:0006355 GO:GO:0016192 GO:GO:0005160 EMBL:CH471127
GO:GO:0046332 GO:GO:0007179 GO:GO:0005083 EMBL:AC012360
InterPro:IPR019453 Pfam:PF10367 CTD:9392 eggNOG:NOG254275
HOGENOM:HOG000007291 HOVERGEN:HBG108563 OrthoDB:EOG4GTKC8
InterPro:IPR019452 Pfam:PF10366 EMBL:AF022795 EMBL:AK291382
EMBL:BC020548 IPI:IPI00550891 PIR:T08622 RefSeq:NP_001136093.1
RefSeq:NP_004248.2 UniGene:Hs.446350 ProteinModelPortal:Q8WUH2
IntAct:Q8WUH2 STRING:Q8WUH2 PhosphoSite:Q8WUH2 DMDM:74730711
PaxDb:Q8WUH2 PRIDE:Q8WUH2 DNASU:9392 Ensembl:ENST00000258449
Ensembl:ENST00000393359 GeneID:9392 KEGG:hsa:9392 UCSC:uc002tcq.3
GeneCards:GC02M105880 HGNC:HGNC:16836 HPA:HPA038397 MIM:606237
neXtProt:NX_Q8WUH2 PharmGKB:PA134963946 InParanoid:Q8WUH2
OMA:VQLWVNI PhylomeDB:Q8WUH2 GenomeRNAi:9392 NextBio:35191
ArrayExpress:Q8WUH2 Bgee:Q8WUH2 CleanEx:HS_TGFBRAP1
Genevestigator:Q8WUH2 Uniprot:Q8WUH2
Length = 860
Score = 274 (101.5 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 91/339 (26%), Positives = 151/339 (44%)
Query: 655 DEDLILQHLGWIADINAVLAVKVLTS----EKRINQLSPDKVIAAIDSKKVEILQRYLQW 710
DE+L+ + W+ + + V+V T E++ N +PD +I + K + L +YL+
Sbjct: 538 DEELVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCL-KKYPKALVKYLEH 596
Query: 711 LIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQ 770
L+ D+ ++HT A+ + + SG G + ET Q
Sbjct: 597 LVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGK---GAEATET---------------Q 638
Query: 771 ERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQ 830
+L+ LQ SDLY +L+ ++G+ L +E AIL+ KLG+ L IL +L+D AAE
Sbjct: 639 AKLRRLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAED 698
Query: 831 YC--AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLS 883
YC GR + Q LL +YL + + AAV LL+ H D QVL+ L
Sbjct: 699 YCLWCSEGRDPPHRQQLFHTLLAIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLP 758
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+QL + Q+ L+R+ ++ +++ + +Q++D+ LC
Sbjct: 759 DTWSVQLLCPFLMGAMRDSIHARRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLC 818
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKCY--RRQGESTSITG 980
C +F YP+ +V C R S+S G
Sbjct: 819 QICQNPFCEPVFVRYPNGGLVHTHCAASRHTNPSSSSPG 857
Score = 116 (45.9 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 82/347 (23%), Positives = 147/347 (42%)
Query: 120 TQPLKK-LGFLKGISVIAKRIRTSDSESTNL-LENNSVSSLANASTSTGQRLLQKFGSGI 177
T+ L++ LGF K ++ +R + + + L L +NS+S L N L+ SG
Sbjct: 66 TKQLQRHLGFKKPVN----ELRAASALNRLLVLCDNSIS-LVNMLN------LEPVPSGA 114
Query: 178 KANGVKVKE-EEQHCRGD----NVFAVIIGKRLVLIELVNGSFV-ILKEIQCMDGVKTMV 231
+ G E GD V + + +R + + LV V I+KE+ + +
Sbjct: 115 RIKGAATFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVA 174
Query: 232 WLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+ + Y + + TG S +F PP++K + +++ +L +G+F
Sbjct: 175 VDGHFLCLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFAT 234
Query: 292 AHGQPVGGSLVFRKSPDAVGE-LSM-YVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQC 349
G + S + +G +S YV+ L + ++ Q + F EG
Sbjct: 235 VAG--ISQRAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFK-EGH--- 288
Query: 350 IATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE--ELECEGEM 407
I D E G++ +VAT V +P E+QI+DLL + +EA+ LA+ E
Sbjct: 289 ILQDFE---GRV-IVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEK 344
Query: 408 AKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSEVFPFIM 452
+ M + Q GF+ L F EA + F + + ++PF++
Sbjct: 345 FQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLL 391
Score = 90 (36.7 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 34/137 (24%), Positives = 62/137 (45%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +EN C++ + L
Sbjct: 426 RFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENFCLLTDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMS---G 638
++ L LY + A+ +W N +G +D + +DL + D ++
Sbjct: 484 EKHKKYFALGLLYHYNNQDAAAVQLWV----NIVNGDVQD-STRSDLYEYIVDFLTYCLD 538
Query: 639 REVAATEASKILEESSD 655
E+ A +L++S +
Sbjct: 539 EELVWAYADWVLQKSEE 555
Score = 63 (27.2 bits), Expect = 9.1e-26, Sum P(3) = 9.1e-26
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 44 IYIGTQSGSL--ILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVG 101
+Y+GT + LL P A T Q+H+ F K PV + +
Sbjct: 37 LYVGTNDCFVYHFLLEERPVPAGPATFTATKQLQRHLGFKK-------PVNELRAASALN 89
Query: 102 KVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
++L+L CD + L + L +P+ +KG + A
Sbjct: 90 RLLVL-CDNSISLVNMLNLEPVPSGARIKGAATFA 123
>UNIPROTKB|I3LIP2 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005160 "transforming growth
factor beta receptor binding" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:FP326708 RefSeq:XP_003354755.2
Ensembl:ENSSSCT00000024727 GeneID:100625522 KEGG:ssc:100625522
Uniprot:I3LIP2
Length = 859
Score = 273 (101.2 bits), Expect = 6.5e-30, Sum P(4) = 6.5e-30
Identities = 89/329 (27%), Positives = 144/329 (43%)
Query: 650 LEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQ---LSPDKVIAAIDSKKVEILQR 706
L S D DL+ + W+ + + V+V T +Q +PD +I + K L +
Sbjct: 533 LTYSLDPDLVWTYADWVLQKSQEVGVQVFTKRPLDDQQGSFNPDDIITCL-KKYPRALVK 591
Query: 707 YLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQ 766
YL+ L+ D+ ++HT A+ E +++ G+ A G + ETR+
Sbjct: 592 YLEHLVMDRRLQREEYHTHLAMLYLD---EVLQQKPGANATGAAVTETRA---------- 638
Query: 767 CPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSE 826
+L+ LQ SD Y +LD I G+ L +E AIL+ KL Q L+IL +L D
Sbjct: 639 -----KLRHLLQKSDSYRVHFLLDRIRGAGLPMESAILHGKLEQHEDALRILVHELADFP 693
Query: 827 AAEQYCA--EIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVL 879
AAE YC GR Y Q LL +YL + AAV LL+ H D QVL
Sbjct: 694 AAEDYCLWRSEGRDPPYRQRLFHLLLALYLGPGPSSTELTVAAVDLLNRHAAEFDAAQVL 753
Query: 880 ETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQIND 939
+ L +QL + Q+ L+++ ++ + +++ + V+++D
Sbjct: 754 QLLPGSWSVQLLCPFLTGAVRDSIHARRTTQVAVGLAKSENLIYKYDKMKLKGSSVRLSD 813
Query: 940 ESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
+ LC C F +P+ +V C
Sbjct: 814 KKLCQLCQTPFSEPAFVRFPNGGLVHTHC 842
Score = 93 (37.8 bits), Expect = 6.5e-30, Sum P(4) = 6.5e-30
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE VDT L+ LY + HD + +L +EN C++ + L
Sbjct: 426 RFLMSYLNEVRSTEMANGYKEDVDTALLKLYAEAD--HDSLLDLLVTENFCLLTDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMS---G 638
++ L LY + A+ +W N +G +D A +DL + D ++
Sbjct: 484 EKHKKYFALGLLYHYNKQDAAAVQLWV----NIVNGDVQD-ATRSDLYEYVVDFLTYSLD 538
Query: 639 REVAATEASKILEESSD 655
++ T A +L++S +
Sbjct: 539 PDLVWTYADWVLQKSQE 555
Score = 88 (36.0 bits), Expect = 6.5e-30, Sum P(4) = 6.5e-30
Identities = 63/293 (21%), Positives = 115/293 (39%)
Query: 170 LQKFGSGIKANGVKVKE-EEQHCRGD----NVFAVIIGKRLVLIELVNGSFV-ILKEIQC 223
L+ SG + G E GD V + + +R + + LV V I++E+
Sbjct: 107 LEPVPSGARIKGAAAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVST 166
Query: 224 MDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLV 283
+ + + + Y + + TG S +F P++K + +++ +L
Sbjct: 167 PEQPLAVAVDGHFLCLALSTQYIILNYSTGASQDLFPYCSEEKRPIVKRIGRQEFLLAGP 226
Query: 284 DNVGVFVDAHGQPVGGSLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGG 343
+G+F G + + ++ YV+ L + ++ Q + F
Sbjct: 227 GGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFK- 285
Query: 344 EGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE--EL 401
EG I D E G++ +VAT V P EEQ++ LL +EA+ LA+
Sbjct: 286 EGH---ILQDFE---GRV-IVATNKGVYILVPRPLEEQVQGLLASHRVEEALVLAKGARR 338
Query: 402 ECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSEVFPFIM 452
E + M V Q GF+ L F EA + F + + ++PF++
Sbjct: 339 NIPKEKFQVMYRRVLQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLL 391
Score = 56 (24.8 bits), Expect = 6.5e-30, Sum P(4) = 6.5e-30
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ PT T T +H+ F K V+ +
Sbjct: 33 CGRNLYLGTSDCFVYHFLLEEKTLPTGTATFTA--TRQLHRHLGFKKAVN-------ELR 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD C+ L L +P+ +KG + A
Sbjct: 84 AASALSRLLVL-CDGCISLVHMLSLEPVPSGARIKGAAAFA 123
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 959 PDDTIVCYKCYRR 971
PDD I C K Y R
Sbjct: 575 PDDIITCLKKYPR 587
>UNIPROTKB|F1P4R5 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005160 "transforming growth factor beta receptor
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046332
"SMAD binding" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0007165
GO:GO:0006886 GO:GO:0016020 GO:GO:0006355 GO:GO:0016192
GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:AADN02017859 EMBL:AADN02017857
EMBL:AADN02017858 IPI:IPI00571976 Ensembl:ENSGALT00000027116
Uniprot:F1P4R5
Length = 865
Score = 232 (86.7 bits), Expect = 9.6e-29, Sum P(4) = 9.6e-29
Identities = 63/230 (27%), Positives = 107/230 (46%)
Query: 757 SGYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQ 816
SG N + + +L+ LQ SDLY +LD I G++L +E AILY KL + L
Sbjct: 626 SGTTDNCMETIELLLKLRSLLQKSDLYRIHFILDKIRGTDLHMESAILYGKLEEHEKALH 685
Query: 817 ILALKLEDSEAAEQYCA--EIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNH 869
IL +L+D AAE+YC R Y + LL +YL+ + AAV LL+NH
Sbjct: 686 ILVHELKDFRAAEEYCIWNSENRDLQYRRRLFHMLLSVYLNPDSSDCALVMAAVDLLNNH 745
Query: 870 GESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLE 929
D VL+ + +QL S + Q+ L++A ++ + +++
Sbjct: 746 AAEFDAALVLQLVPDSWSVQLLSPFLAGAVRQSIHTKRMTQVALGLAQAENLIYKYEKVK 805
Query: 930 ERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKCYRRQGESTSIT 979
+ + ++D+ +C C F YP+ +V C + +++++T
Sbjct: 806 HKGAPILLSDKKVCQVCQNPFCEPAFVRYPNGGVVHTHCAANRHQNSNVT 855
Score = 126 (49.4 bits), Expect = 9.6e-29, Sum P(4) = 9.6e-29
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLD 582
R + YL R E+ KE +DT L+ LY N + +L SEN C++ + L+
Sbjct: 427 RFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANH-ESLLDLLVSENFCLLTDSAAWLE 485
Query: 583 ESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVA 642
+ L LY G + AL +W + G +D + +DL + D ++
Sbjct: 486 KHKKYFALGLLYHYNGQDAAALQLWVQIV----DGDIED-STRSDLYEYVVDFLT----F 536
Query: 643 ATEASKILEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDS-KKV 701
++ + + S + +LQ ++ + K E+ N ++PD VI+ ++ K
Sbjct: 537 CSDQDLVWKYS---EWVLQKN---EEVGVQIFTKRPLEEQEKNNMNPDDVISCLNKYPKA 590
Query: 702 EILQRYLQWLIEDQDSDDTQFHT-LYALSL 730
I +YL+ L+ ++ + ++HT L AL L
Sbjct: 591 RI--KYLEHLVLERKIEKEKYHTHLAALYL 618
Score = 88 (36.0 bits), Expect = 9.6e-29, Sum P(4) = 9.6e-29
Identities = 70/306 (22%), Positives = 121/306 (39%)
Query: 160 NASTSTGQRLLQKFGSGIKANG-VKVKEEEQHCRGD----NVFAVIIGKRLVLIELVNGS 214
N T L+ SG + G V E GD V + + +R + + +V
Sbjct: 97 NTITLVNMMNLEPVPSGARIKGAVTFTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFED 156
Query: 215 FV-ILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLL 273
V I+KE+ + + + + Y + + TG S +F P++K +
Sbjct: 157 RVQIVKEVVTPEQPCAVAVDGYYLCLALTTQYIILNYNTGISQDLFPYCSDEKRPIVKRI 216
Query: 274 SKEQKVLLLVDNV-GVFVDAHGQPVGGSLVFRKSPDAVGELSM--YVVVLRGGKMELYHK 330
+++ +L + G+F G + S + +G YVV L + ++
Sbjct: 217 GRQEFLLAGPGGLAGMFATVDG--ISQRAPVHWSENVIGAALCFPYVVALDEEFITVHSM 274
Query: 331 KSGICVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKD 390
Q + F EG I D E GK+ +VAT V +P E+QI+DLL
Sbjct: 275 LDQQQKQTLPFK-EGH---ILQDFE---GKV-IVATNKGVYILVPLPLEKQIQDLLASHR 326
Query: 391 FKEAISLAE--ELECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSE 446
+EA+ LA+ E + M + Q GF+ L F EA + F + +
Sbjct: 327 VEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELIS 386
Query: 447 VFPFIM 452
++PF++
Sbjct: 387 LYPFLL 392
Score = 56 (24.8 bits), Expect = 9.6e-29, Sum P(4) = 9.6e-29
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 40 CQVLIYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDD 99
C +YIGT + LD +T+ + Q H K + PV +
Sbjct: 33 CGKNLYIGTNDCFIYHFMLDEKVSTSGKITYAATKQLH----KYLGFK-KPVSELKAASA 87
Query: 100 VGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKG 131
+ ++L+L CD + L + + +P+ +KG
Sbjct: 88 LTRLLVL-CDNTITLVNMMNLEPVPSGARIKG 118
>UNIPROTKB|F1MWF9 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9913 "Bos taurus"
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005160 "transforming growth factor beta receptor
binding" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005083 "small GTPase regulator activity"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637
Pfam:PF00780 PROSITE:PS50219 GO:GO:0007165 GO:GO:0006886
GO:GO:0016020 GO:GO:0006355 GO:GO:0016192 GO:GO:0005622
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 IPI:IPI00866966
UniGene:Bt.5257 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:DAAA02030310
Ensembl:ENSBTAT00000028967 Uniprot:F1MWF9
Length = 859
Score = 257 (95.5 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 89/329 (27%), Positives = 142/329 (43%)
Query: 650 LEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLS---PDKVIAAIDSKKVEILQR 706
L S+D DL+ +H W+ + + V+V T Q S PD +I+ + K + L +
Sbjct: 533 LTYSTDPDLVWRHADWVLQRSQEVGVQVFTKRPLDEQQSGFNPDDIISCL-KKYPQALVK 591
Query: 707 YLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQ 766
YL+ L+ ++ ++HT A+ E ++ + ++ ET
Sbjct: 592 YLEHLVTERRLQKEEYHTHLAVLYLD---EVLQQRPCTPDKDAEVTET------------ 636
Query: 767 CPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSE 826
Q +L+ LQ SDLY ++D G+ L LE AIL+ KL Q L IL +L D
Sbjct: 637 ---QAKLRRLLQESDLYRVHFLMDRTRGAGLPLESAILHGKLEQHEEALHILVHELADFP 693
Query: 827 AAEQYCA--EIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVL 879
AAE YC GR Y Q LL +YL AAV LL+ H D QVL
Sbjct: 694 AAEDYCLWRSEGRDPPYRQRLFHLLLAVYLGPGPAAPARTVAAVDLLNRHAVEFDAAQVL 753
Query: 880 ETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQIND 939
+ L +QL + Q+ L+R+ ++ + +++ + V+++D
Sbjct: 754 QLLPGTWSVQLLRPFLMGAMRDSIHARRTTQVAVGLARSENLIYKYDKMKLKGSSVRLSD 813
Query: 940 ESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
+ LC C +F YP+ +V C
Sbjct: 814 KKLCQMCQNPFLEPVFVRYPNGGLVHTHC 842
Score = 100 (40.3 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 74/323 (22%), Positives = 130/323 (40%)
Query: 124 KKLGFLKGISVIAKRIRTSDSESTNLLENNSVSSLANASTSTGQRLLQKFGSGIKANGVK 183
+ LGF K +S +R + + S L+ + SL + + L+ SG + G
Sbjct: 71 RHLGFKKAVS----ELRAASALSRLLVLCDGCISLVHMLS------LEPVPSGARIKGAT 120
Query: 184 VKE-EEQHCRGD----NVFAVIIGKRLVLIELVNGSFV-ILKEIQCMDGVKTMVWLNDSI 237
E GD V + + +R + + LV V I++E+ + + +
Sbjct: 121 AFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFL 180
Query: 238 IVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPV 297
+ Y + + TG + +F P++K + +++ +L +G+F G +
Sbjct: 181 CLALTTQYIILNYSTGAAQDLFPFCSEERRPIVKRIGRQEFLLAGPGGLGMFATVAG--I 238
Query: 298 GGSLVFRKSPDAVGELSM--YVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEE 355
R S + +G YVV L + ++ Q + F EG I D E
Sbjct: 239 SQRAPVRWSENVIGAAVCFPYVVALDDEFITVHSMLDQQQKQTLPFK-EGH---ILQDFE 294
Query: 356 CGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE--ELECEGEMAKEMLS 413
G++ +VAT V +P E+QI+DLL +EA+ LA+ E + M
Sbjct: 295 ---GRV-IVATSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYR 350
Query: 414 FVHAQIGFLLLFDLHFEEAVDHF 436
+ Q GF+ L F EA + F
Sbjct: 351 RILLQAGFIQFAQLQFLEAKELF 373
Score = 84 (34.6 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +EN C++ + L
Sbjct: 426 RFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENFCLLPDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIW 607
++ L LY + A+ +W
Sbjct: 484 EKHKKYFALGLLYHYNHQDAAAVQLW 509
Score = 54 (24.1 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ P + T T +H+ F K VS +
Sbjct: 33 CGRNLYVGTSDCFVYHFLLEEKTLPGGSATFTA--TRQLHRHLGFKKAVS-------ELR 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD C+ L L +P+ +KG + A
Sbjct: 84 AASALSRLLVL-CDGCISLVHMLSLEPVPSGARIKGATAFA 123
Score = 37 (18.1 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 959 PDDTIVCYKCY 969
PDD I C K Y
Sbjct: 575 PDDIISCLKKY 585
>ZFIN|ZDB-GENE-070410-66 [details] [associations]
symbol:tgfbrap1 "transforming growth factor, beta
receptor associated protein 1" species:7955 "Danio rerio"
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 ZFIN:ZDB-GENE-070410-66
GO:GO:0006886 GO:GO:0016192 GO:GO:0005622 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
OMA:VQLWVNI GeneTree:ENSGT00530000063596 EMBL:CR936426
IPI:IPI00845960 Ensembl:ENSDART00000087797 Bgee:F1QP13
Uniprot:F1QP13
Length = 863
Score = 252 (93.8 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 91/331 (27%), Positives = 148/331 (44%)
Query: 654 SDEDLILQHLGWIADINAVLAVKVLT----SEKRINQLSPDKVIAAIDSKKVEILQRYLQ 709
S+ DL+ ++ W + + V++ T SE+R QL+ D VI + K + L +L+
Sbjct: 537 SNLDLVWRYADWALQKDQKIGVQIFTKRPTSEERRGQLNADDVITYLQ-KHSQALLLFLE 595
Query: 710 WLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPV 769
L+ ++ ++HT A+ A+ + S S+ Q+ R
Sbjct: 596 HLVLEKKLQKEKYHTNLAVLYAERVLGLISRPSTSEE---QLSAAR-------------- 638
Query: 770 QERLQIFLQSSDLYDPEDVLDLIEGSELWL-EKAILYRKLGQETLVLQILALKLEDSEAA 828
++LQ L+ S+LY + +L I+ SEL L E+A L+ KL + L +L +L+DS AA
Sbjct: 639 -QKLQRLLKESNLYRVQLLLGKIQDSELLLLERATLHGKLEEHDKALHVLVHQLKDSSAA 697
Query: 829 EQYC--AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLET 881
E+YC A + +Y Q LL +YLD AAV LL+ H E D ++VL+
Sbjct: 698 EEYCSWASASQDSSYRQNLFHQLLSVYLDPDVPGGAQTVAAVDLLNRHAEVFDAVRVLKL 757
Query: 882 LSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDES 941
L D L L + Q+ L+RA ++ RL+ R V ++++
Sbjct: 758 LPEDWSLPLLRPFLCGAMRATVHARCTSQVALGLARAQNLQLLHDRLKYRGGPVLVSEKK 817
Query: 942 LCDSCHARLGTKLFAMYPDDTIVCYKCYRRQ 972
C CH A P T V C ++
Sbjct: 818 GCQLCHNTFSEPDCACLPGGTPVHINCVAKK 848
Score = 144 (55.7 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 64/245 (26%), Positives = 109/245 (44%)
Query: 198 AVIIGKR-LVLIELVNGSFV-ILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQS 255
AV++ +R V I V+ V +LKE+ + + +I + Y + + TG S
Sbjct: 139 AVVLARRRAVQICTVHEDRVQMLKEVTTPEQPCALSLDGYNICLALSTQYMILNYSTGAS 198
Query: 256 GVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGGSLVFRKSPDAVGELSM 315
+F P++K + +E+ +L +G+F +A G + + ++ A
Sbjct: 199 QDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEGISQRAPVSWSENVIAAAVCFP 258
Query: 316 YVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQK 375
YVV L G + ++ Q ++F GQ + E GK+ VVA+ V
Sbjct: 259 YVVALDEGFVTVHSMLDQQLKQTLSFRD---GQLLQDFE----GKV-VVASSKAVYMLVP 310
Query: 376 VPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKEMLSFVHAQI----GFLLLFDLHFEE 431
+P E QI+DLL +EA++L E + + KE +H +I GF+ L F E
Sbjct: 311 LPLERQIQDLLTSHRVEEALTLTEA--AQRNIPKEKYQILHRRILQQAGFIQFGQLQFLE 368
Query: 432 AVDHF 436
A +HF
Sbjct: 369 AKEHF 373
Score = 119 (46.9 bits), Expect = 7.7e-13, Sum P(3) = 7.7e-13
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLD 582
R + YL R ++ E VDT L+ LY + ++ LA SEN+C++ + L+
Sbjct: 426 RFLISYLHEVRSSDIANGFHEDVDTALLKLYAETSHESLLDLLA-SENACLLADSAPWLE 484
Query: 583 ESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVA 642
+ L LY G + AL +W + +G +D + DL + D +S
Sbjct: 485 KHHKYYALGLLYHYNGQDAAALQMWVKIV----NGDLQD-STRPDLFEYVVDFLS----F 535
Query: 643 ATEASKILEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDSKKVE 702
+ + + D LQ I + K TSE+R QL+ D VI + K +
Sbjct: 536 CSNLDLVWRYA---DWALQK---DQKIGVQIFTKRPTSEERRGQLNADDVITYLQ-KHSQ 588
Query: 703 ILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSK 745
L +L+ L+ ++ ++HT A+ A+ + S S+
Sbjct: 589 ALLLFLEHLVLEKKLQKEKYHTNLAVLYAERVLGLISRPSTSE 631
Score = 53 (23.7 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 506 GFLSNPPSRAELLELAIRNITRYLEVSRKKELTILVKEGVDTLLMYLYRA 555
G +S P + E L A + + R L+ S + +L+ + D+ L+ L RA
Sbjct: 622 GLISRPSTSEEQLSAARQKLQRLLKESNLYRVQLLLGKIQDSELLLLERA 671
Score = 45 (20.9 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGF-LKGIS 133
L++ CD + + D + +P+ G LKG++
Sbjct: 90 LIVLCDSAITVVDMVTLEPVPTGGAKLKGVT 120
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 753 ETRSSGYGKNSIFQCPVQERLQIFLQSS-----DLYDPEDVLDLIEGSELWLEK------ 801
E RSS N + L+++ ++S DL E+ L+ S WLEK
Sbjct: 434 EVRSSDIA-NGFHEDVDTALLKLYAETSHESLLDLLASENAC-LLADSAPWLEKHHKYYA 491
Query: 802 -AILYRKLGQETLVLQILALKLEDSEAAEQYCAEIGRPDAYMQLLD 846
+LY GQ+ LQ+ +K+ + + + RPD + ++D
Sbjct: 492 LGLLYHYNGQDAAALQMW-VKIVNGDLQDST-----RPDLFEYVVD 531
>UNIPROTKB|A7MB11 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005083 "small GTPase regulator
activity" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0005737
GO:GO:0006886 GO:GO:0016192 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 EMBL:BC151278 IPI:IPI00866966 RefSeq:NP_001095478.1
UniGene:Bt.5257 STRING:A7MB11 GeneID:514660 KEGG:bta:514660
CTD:9392 eggNOG:NOG254275 HOGENOM:HOG000007291 HOVERGEN:HBG108563
InParanoid:A7MB11 OrthoDB:EOG4GTKC8 NextBio:20871450
InterPro:IPR019452 Pfam:PF10366 Uniprot:A7MB11
Length = 859
Score = 261 (96.9 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 90/329 (27%), Positives = 142/329 (43%)
Query: 650 LEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLS---PDKVIAAIDSKKVEILQR 706
L S+D DL+ +H W+ + + V+V T Q S PD +I+ + K + L +
Sbjct: 533 LTYSTDPDLVWRHADWVLQRSQEVGVQVFTKRPLDEQQSGFNPDDIISCL-KKYPQALVK 591
Query: 707 YLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQ 766
YL+ L+ ++ ++HT A+ E ++ + ++ ET
Sbjct: 592 YLEHLVTERRLQKEEYHTHLAVLYLD---EVLQQRPCTPDKDAEVTET------------ 636
Query: 767 CPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSE 826
Q +L+ LQ SDLY ++D G+ L LE AIL+ KL Q L IL +L D
Sbjct: 637 ---QAKLRRLLQESDLYRVHFLMDRTRGAGLPLESAILHGKLEQHEEALHILVHELADFP 693
Query: 827 AAEQYCA--EIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVL 879
AAE YC GR Y Q LL +YL AAV LL+ H D QVL
Sbjct: 694 AAEDYCLWRSEGRDPPYRQRLFHLLLAVYLGPGPAAPARTVAAVDLLNRHAVEFDAAQVL 753
Query: 880 ETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQIND 939
+ L +QL + Q+ L+R+ ++ + +++ + V+++D
Sbjct: 754 QLLPGTWSVQLLRPFLMGAMRDSIHARRTTQVAVGLARSENLIYKYDKMKLKGSSVRLSD 813
Query: 940 ESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
E LC C +F YP+ +V C
Sbjct: 814 EKLCQMCQNPFLEPVFVRYPNGGLVHTHC 842
Score = 92 (37.4 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 72/323 (22%), Positives = 130/323 (40%)
Query: 124 KKLGFLKGISVIAKRIRTSDSESTNLLENNSVSSLANASTSTGQRLLQKFGSGIKANGVK 183
+ LGF K +S +R + + S L+ + SL + + L+ SG + G
Sbjct: 71 RHLGFKKAVS----ELRAASALSRLLVLCDGCISLVHMLS------LEPVPSGARIKGAT 120
Query: 184 VKE-EEQHCRGD----NVFAVIIGKRLVLIELVNGSFV-ILKEIQCMDGVKTMVWLNDSI 237
E GD V + + +R + + LV V I++E+ + + +
Sbjct: 121 AFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFL 180
Query: 238 IVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPV 297
+ Y + + TG + +F P++K + +++ +L +G+F G +
Sbjct: 181 CLALTTQYIILNYSTGAAQDLFPFCSEERRPIVKRIGRQEFLLAGPGGLGMFATVAG--I 238
Query: 298 GGSLVFRKSPDAVGELSM--YVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEE 355
R S + +G YVV L + ++ Q + F EG I D E
Sbjct: 239 SQRAPVRWSENVIGAAVCFPYVVALDDEFITVHSMLDQQQKQTLPFK-EGH---ILQDFE 294
Query: 356 CGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE--ELECEGEMAKEMLS 413
G++ +VAT V +P E++I+DLL +EA+ LA+ E + M
Sbjct: 295 ---GRV-IVATSKGVYILVPLPLEKRIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYR 350
Query: 414 FVHAQIGFLLLFDLHFEEAVDHF 436
+ Q GF+ L F +A + F
Sbjct: 351 RILLQAGFIQFAQLQFLKAKELF 373
Score = 84 (34.6 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +EN C++ + L
Sbjct: 426 RFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENFCLLPDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIW 607
++ L LY + A+ +W
Sbjct: 484 EKHKKYFALGLLYHYNHQDAAAVQLW 509
Score = 54 (24.1 bits), Expect = 8.5e-23, Sum P(3) = 8.5e-23
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ P + T T +H+ F K VS +
Sbjct: 33 CGRNLYVGTSDCFVYHFLLEEKTLPGGSATFTA--TRQLHRHLGFKKAVS-------ELR 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD C+ L L +P+ +KG + A
Sbjct: 84 AASALSRLLVL-CDGCISLVHMLSLEPVPSGARIKGATAFA 123
>DICTYBASE|DDB_G0279169 [details] [associations]
symbol:vps39 "citron-like domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0042144 "vacuole
fusion, non-autophagic" evidence=ISS] [GO:0030897 "HOPS complex"
evidence=ISS] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0007033 "vacuole organization"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 dictyBase:DDB_G0279169
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF50978
GenomeReviews:CM000152_GR GO:GO:0030897 GO:GO:0017112
EMBL:AAFI02000029 GO:GO:0042144 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434 OMA:CLGPIKM
RefSeq:XP_001732990.1 PRIDE:B0G127 EnsemblProtists:DDB0234136
GeneID:8621905 KEGG:ddi:DDB_G0279169 ProtClustDB:CLSZ2501702
Uniprot:B0G127
Length = 851
Score = 267 (99.0 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 85/320 (26%), Positives = 150/320 (46%)
Query: 658 LILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDS 717
+IL+H W+ A+K+ T +++ + LSPD VI + +L+ YL+ +I D S
Sbjct: 525 IILEHSKWVLQKCPEDALKIFTVDRK-DPLSPDDVIPHLKQCAPSLLRPYLEHIINDPIS 583
Query: 718 DDT--QFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQI 775
+ ++H S +E ++ S A + G + GK S ++ ++
Sbjct: 584 PNKNPEYHNQLVFEYLGSILELIKQTPNS-AIVREPGLIPA---GKESGELGELRTKIIQ 639
Query: 776 FLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC--- 832
FL++S Y PE +L ++L+ E+AIL K+G+ L I A KL++ AE+YC
Sbjct: 640 FLENSKYYLPEKMLSRFPSNDLYEERAILLSKIGRHEQALAIYAHKLKNFAMAEEYCDRH 699
Query: 833 ----AEIGRPDAYMQLLDMYLDSQDGK-EPMFKAAVRLLHNHGESLDPLQVLETLSPDMP 887
+E R D Y+ LL++YL D P+ A++LL+ H S++ + L L + P
Sbjct: 700 YNKDSEESR-DVYLSLLNVYLKPTDANTSPLLDPALKLLNKHYRSINTPKALSLLPLNTP 758
Query: 888 LQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCH 947
+ QIV NL ++ + + + ++ ++I ++ C C+
Sbjct: 759 IDQLYPFFESVIRDNTKTKRDNQIVKNLFKSENFKIKDELSQLKTGVIKITEDLTCPICN 818
Query: 948 AR-LGTKLFAMYPDDTIVCY 966
LGT+ F PD T + Y
Sbjct: 819 KIFLGTQAFVARPDGTALHY 838
Score = 84 (34.6 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 44/248 (17%), Positives = 106/248 (42%)
Query: 201 IGKRLVLIELVNGSFVILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFT 260
+ K+LVL F LKE D K + + + IIV Y++ + Q G +
Sbjct: 137 VKKKLVLYGWDGSDFYELKEFNMPDIAKHIDYRGNFIIVCFKKVYNI---INTQDGSVIN 193
Query: 261 LPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGG-SLVFRKSPDAVGELSMYVVV 319
+ D L +E + L++ ++ F++ G PV S+ ++ +P ++ + +
Sbjct: 194 V-DADKLTFTTFL-QENEFLMVKGSMSFFINTAGNPVRRHSITWQDAPSSMSIYQPFAIS 251
Query: 320 LRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSE 379
+ +E+ + ++ + + A + + V++ T + Q +P
Sbjct: 252 IEPRLVEVQILPDPNDPKTIS-----QSLFLPACKSISAKRDIYVSSATSIWRLQPLPIL 306
Query: 380 EQIKDLLRKKDFKEAISLAEELECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHS 439
+ + ++ K++++ AI+L + + KE L + + L F+ A+ +F+ +
Sbjct: 307 DLVDQMVTKQEYETAINLLQTSKDIIPGIKERLIKIKTSAAYHLFSKEQFQAAMGYFISA 366
Query: 440 ETMQPSEV 447
+ + P ++
Sbjct: 367 Q-VDPLKI 373
Score = 82 (33.9 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 509 SNPPSRAELLELAIRNITRYLEVSRKKELT---ILVKEGVDTLLMYLYRALNRVHDMENL 565
+NP + EL + +E S EL ++E VDT L+ +Y ++ + +
Sbjct: 400 NNPRALPELEHYLVEFRKNKIEYSSPPELLNSGYTLQELVDTTLLKVY-IKHKASLIPHF 458
Query: 566 APSENSCIVEELETLLDESGHLRTLAFLYASKGMSSKALAI 606
+N C +EE E +L E L L Y SK + KAL +
Sbjct: 459 FHLKNHCHIEESERVLLEEKKLTELILFYKSKDLHRKALTL 499
Score = 46 (21.3 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
++IGT G +++ D H N Q V T V+ P+ + + DD K+
Sbjct: 36 LFIGTTEGHVLVY--DVIEKENQH-GNI---QVSVIIRDTKLVSKKPITQMSIFDDYNKL 89
Query: 104 LLL 106
L+L
Sbjct: 90 LVL 92
Score = 41 (19.5 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 40 CQVLIY--IGTQSGSLILLSLDPTAATTLHVPNT-TPSQQHVSFLKTVSVADSPV 91
C +Y I TQ GS+I + D TT N + +SF ++ A +PV
Sbjct: 176 CFKKVYNIINTQDGSVINVDADKLTFTTFLQENEFLMVKGSMSFF--INTAGNPV 228
Score = 40 (19.1 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 306 SPDAVGELSMYVVVLRGGKME 326
+P A+ EL Y+V R K+E
Sbjct: 401 NPRALPELEHYLVEFRKNKIE 421
Score = 38 (18.4 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 348 QCIATDEECGAGKLLVVATPTKVICYQKVPSEEQ 381
+CI E G L + T V+ Y + E Q
Sbjct: 23 ECIEQWEYKGKKHLFIGTTEGHVLVYDVIEKENQ 56
>UNIPROTKB|E2RKZ9 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005160
"transforming growth factor beta receptor binding" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 CTD:9392 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:AAEX03007417 RefSeq:XP_538441.3
ProteinModelPortal:E2RKZ9 Ensembl:ENSCAFT00000003341 GeneID:481320
KEGG:cfa:481320 NextBio:20856154 Uniprot:E2RKZ9
Length = 859
Score = 234 (87.4 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 91/342 (26%), Positives = 149/342 (43%)
Query: 650 LEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDSKKVEILQRYLQ 709
L S D++L+ ++ W+ + + V+V T KR L + DS + L++Y +
Sbjct: 533 LTYSLDQELVWKYADWVLQKSEEVGVQVFT--KR--PLDEQQNSFNPDSI-ITCLKKYPK 587
Query: 710 WLIEDQDS---DDTQFHTLYALSLAKSAIE-AFEEESGSKAFGTQMGETRSSGYGKNSIF 765
L++ + D Y LA ++ +E SG+ + G + ET
Sbjct: 588 ALVKYLEHLVIDRRLQKEEYHTHLALLYLDKVLQERSGANSKGVEATET----------- 636
Query: 766 QCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDS 825
Q +LQ LQ SDLY ++D I G+ L +E AIL+ KL + L+IL +L+D
Sbjct: 637 ----QVKLQHLLQKSDLYRVHILIDRIRGAGLPMESAILHGKLEEHEEALRILVHELQDF 692
Query: 826 EAAEQYCA--EIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQV 878
AAE YC GR Y Q LL MYL + AA LL+ H + D +V
Sbjct: 693 SAAEDYCLWRSEGRDPPYRQRLFHTLLAMYLQPGPAAPELAVAAADLLNRHAANFDAARV 752
Query: 879 LETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQIN 938
L+ L +QL + Q+ L+R+ ++ + +++ + VQ++
Sbjct: 753 LQLLPGGWSVQLLRPFLTGAVRNSVHARRTTQVALGLARSENLIYKYDKMKLKGSSVQLS 812
Query: 939 DESLCDSCHARLGTKLFAMYPDDTIVCYKCYRRQGESTSITG 980
D+ LC C +F YP+ +V C + + S G
Sbjct: 813 DKKLCQMCQNPFCEPVFVRYPNGGLVHTHCAASRHTNPSSPG 854
Score = 104 (41.7 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 81/351 (23%), Positives = 144/351 (41%)
Query: 115 TDSLLTQPLKKLGFLKGISVIAKRIRTSDSESTNL-LENNSVSSLANASTSTGQRLLQKF 173
T S Q + LGF K +S +R + + + L L +NS++ L S L+
Sbjct: 62 TFSATKQLHRHLGFRKPVS----ELRAASALNRLLVLCDNSITLLNMMS-------LEPV 110
Query: 174 GSGIKANG-VKVKEEEQHCRGD----NVFAVIIGKRLVLIELVNGSFV-ILKEIQCMDGV 227
SG + G V + E GD V + + +R + + LV V I++E+ +
Sbjct: 111 PSGARIKGAVALALNENPVSGDPFCVEVCIISVKRRTIQLFLVYEDRVQIVREVSTPEQP 170
Query: 228 KTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVG 287
+ + + Y + + TG S +F P++K + +++ +L +G
Sbjct: 171 LAVAVDGHFLCLALTTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLG 230
Query: 288 VFVDAHGQPVGGSLVFRKSPDAVGELSM--YVVVLRGGKMELYHKKSGICVQAVTFGGEG 345
+F G + S + +G YV+ L + ++ Q + F EG
Sbjct: 231 MFATVAG--ISQRAPVHWSENVIGAAICFPYVIALDDEFITVHSMLDQQQKQTLPFK-EG 287
Query: 346 GGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE--ELEC 403
I D E G++ +VAT V +P E+QI+DLL +EA+ LA+
Sbjct: 288 H---ILQDFE---GRV-IVATSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNI 340
Query: 404 EGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSEVFPFIM 452
E + M + Q GF+ L F EA + F + + ++PF++
Sbjct: 341 PKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLL 391
Score = 94 (38.1 bits), Expect = 4.9e-26, Sum P(3) = 4.9e-26
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +ENSC++ + L
Sbjct: 426 RFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENSCLLTDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMS---G 638
++ L LY + A+ +W N +G D + +DL + D ++
Sbjct: 484 EKHKKYFALGLLYHYNNQDAAAVQLWV----NIVNGDIHD-STRSDLYEYVVDFLTYSLD 538
Query: 639 REVAATEASKILEESSD 655
+E+ A +L++S +
Sbjct: 539 QELVWKYADWVLQKSEE 555
Score = 53 (23.7 bits), Expect = 8.8e-21, Sum P(3) = 8.8e-21
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ PT T T +H+ F K PV +
Sbjct: 33 CGKNLYVGTGDCVVYHFLLEERALPTGTATFSA--TKQLHRHLGFRK-------PVSELR 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD + L + + +P+ +KG +A
Sbjct: 84 AASALNRLLVL-CDNSITLLNMMSLEPVPSGARIKGAVALA 123
>DICTYBASE|DDB_G0277663 [details] [associations]
symbol:DDB_G0277663 "Transforming growth factor-beta
receptor-associated protein 1" species:44689 "Dictyostelium
discoideum" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
dictyBase:DDB_G0277663 GO:GO:0006886 GO:GO:0016192 GO:GO:0005622
EMBL:AAFI02000020 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434 RefSeq:XP_642561.1
PRIDE:Q54ZD6 EnsemblProtists:DDB0218004 GeneID:8621123
KEGG:ddi:DDB_G0277663 InParanoid:Q54ZD6 OMA:VILYLRI Uniprot:Q54ZD6
Length = 1068
Score = 155 (59.6 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 199 VIIGKRLVLIELVNGSFVILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVI 258
V+ ++L L E + G F + +EI + T+ W S+ VG+ Y++ +G +
Sbjct: 129 VVTKRKLTLYEFI-GVFDMYREIALPELALTVEWCKTSLCVGSRKEYAIVDADSGLYKSL 187
Query: 259 FTLPDVSCP-PMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGGSLVFRKSPDAVGELSMYV 317
L D + P P KL+ ++K LL ++ V VD G V GS+++ +P ++ L Y+
Sbjct: 188 LEL-DKNVPGPRTKLILDQEKFLLTTVDLSVLVDLQGDIVQGSIIWDSNPMSMSYLEPYL 246
Query: 318 V-VLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATD--------EECGAGKLLVV---A 365
+ +L + ++ K+ +Q + G ++ E G GK +V +
Sbjct: 247 ITILHNRCINIHDMKNQKLIQELNNSSHNKGASSSSSVISFQQIFEGRGNGKDFIVLYGS 306
Query: 366 TPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAE 399
+P V C ++ + L+ + + +EAI L E
Sbjct: 307 SPNSVYCLHVGNIDDLVHQLINRGEHEEAIRLFE 340
Score = 134 (52.2 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 34/143 (23%), Positives = 68/143 (47%)
Query: 843 QLLDMYLDSQDGKEPMF-KAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXX 901
QL + + +G EP+ + + L+++ E +DP++VL L +P+ L +
Sbjct: 918 QLTNSLIKDSNG-EPIIPRYIIEFLNHYYEEMDPIKVLALLPNSIPINLLESYLSNSFNY 976
Query: 902 XXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCHARLGTKLFAMYPDD 961
+ +IV NL +++++ + + S V I + C C + ++F +P+
Sbjct: 977 SISQQRESKIVKNLQKSLNLSTKSEYMMVCSASVYIGPDRRCAVCSKPISDRVFVYFPNG 1036
Query: 962 TIVCYKCYRRQGESTSITGRDFK 984
TIV KC++ I+ R+FK
Sbjct: 1037 TIVHPKCFQIPF-ICPISARNFK 1058
Score = 96 (38.9 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 45/161 (27%), Positives = 73/161 (45%)
Query: 673 LAVKVLTSEKRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAK 732
L +K+ +KR +Q D VI + Q YL++LI +++ HT LA
Sbjct: 641 LPMKIFL-KKRKDQFIIDDVIEFLTPFGDYYFQIYLEYLIYQEENRVDYLHT----KLAT 695
Query: 733 SAIEAFEEESGSKAFGTQMGETRSSGYGKNSI-FQCPVQERLQIFLQSSDLYDPEDVLDL 791
S IE + F E +SS G+ I +++L L+ S+ Y+ +L
Sbjct: 696 SYIE--------QIF-KNCPELQSS-QGRTDIPIANSDRQKLINLLELSNCYNASTLLHR 745
Query: 792 IEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC 832
+ S L+ E ILY ++GQ + I+ KL + + AE C
Sbjct: 746 VRNSLLYEELVILYLRIGQYEKMFNIIVWKLNNFKKAEYIC 786
Score = 69 (29.3 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
IY+GT G ++L ++ T S+ S K++ PV+ + ++ D+GK+
Sbjct: 28 IYLGTNDGQILLYIIEKVENNK---KITFKSRMENS--KSLGYGKKPVDKLLLIADIGKL 82
Query: 104 LLLFCD 109
L L CD
Sbjct: 83 LTL-CD 87
Score = 50 (22.7 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 521 AIRNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHDMEN--LAPSEN-SCIVEEL 577
AI N +E+ K++ L+ + L +YL +N ++ N L+ SE + L
Sbjct: 432 AISNAPNTIEL---KDVDSLIDDSKSQLTLYLEHYINNINSSSNALLSGSEEFKDLTTVL 488
Query: 578 ETLLDESGHLRTLAFLYA 595
L ES + L L A
Sbjct: 489 LKLYSESNKISKLISLLA 506
Score = 40 (19.1 bits), Expect = 5.0e-18, Sum P(5) = 5.0e-18
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 792 IEGSELWLEKAILYRKLG 809
I+ E WL LY++LG
Sbjct: 523 IQDVEEWLNNKQLYKQLG 540
Score = 37 (18.1 bits), Expect = 2.6e-22, Sum P(5) = 2.6e-22
Identities = 10/47 (21%), Positives = 26/47 (55%)
Query: 502 AVDDGFLSNPPSRAELLELAIRNITRYLEVSRKKELTILVKEGVDTL 548
++ D +SN P+ EL +++ ++ S K +LT+ ++ ++ +
Sbjct: 427 SIKDSAISNAPNTIEL-----KDVDSLIDDS-KSQLTLYLEHYINNI 467
>RGD|1310772 [details] [associations]
symbol:Tgfbrap1 "transforming growth factor, beta receptor
associated protein 1" species:10116 "Rattus norvegicus" [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
RGD:1310772 GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 OrthoDB:EOG4GTKC8 InterPro:IPR019452 Pfam:PF10366
OMA:VQLWVNI GeneTree:ENSGT00530000063596 IPI:IPI00362404
Ensembl:ENSRNOT00000037094 UCSC:RGD:1310772 Uniprot:D3ZXT8
Length = 860
Score = 216 (81.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 79/321 (24%), Positives = 140/321 (43%)
Query: 655 DEDLILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDSKKVEILQRYLQWLIED 714
D++L+ H W+ + + V+V T KR L + + + L++Y + L++
Sbjct: 538 DQELVWTHADWLLQKSQEVGVQVFT--KR--PLDEQQQTSFNPDDIISCLKKYPKALVKY 593
Query: 715 QDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQ 774
+ H + L K E + + + +G GK+ + Q +L+
Sbjct: 594 LE------HLVIDRRLQK---EEYHTHLALLYLEEVLRQRAPTG-GKD-VEATETQAKLR 642
Query: 775 IFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYC-- 832
LQ SDLY + + I+G+ L +E AIL+ KLG+ L IL ++ D AAE YC
Sbjct: 643 RLLQKSDLYRVHLLKEKIQGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLW 702
Query: 833 AEIGRPDAYMQ-----LLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMP 887
+ G+ A Q LL MYL + + AAV LL++H D QVL+ L
Sbjct: 703 SSEGQDAACRQRLFHTLLAMYLRAGPSAHDLTVAAVDLLNHHAREFDATQVLQLLPDTWS 762
Query: 888 LQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLCDSCH 947
+QL + Q+ L+++ ++ +++ + + ++++ LC C
Sbjct: 763 VQLLCPFLTGAMRDSIHARRTTQVALGLAKSENLIYMYDKMKLKGSAIWLSEKKLCQLCQ 822
Query: 948 ARLGTKLFAMYPDDTIVCYKC 968
G +F YP+ +V C
Sbjct: 823 NPFGEPVFVRYPNGGLVHTHC 843
Score = 129 (50.5 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 53/232 (22%), Positives = 100/232 (43%)
Query: 523 RNITRYLEVSRKKELTILVKEGVDTLLMYLYRALNRVHD-MENLAPSENSCIVEELETLL 581
R + YL R E+ KE +DT L+ LY + HD + +L +ENSC++ + L
Sbjct: 426 RFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEAD--HDSLLDLLVTENSCLLTDSAAWL 483
Query: 582 DESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMS---G 638
++ L LY + A+ +W N +G +D + +DL + D ++
Sbjct: 484 EKHKKYFALGLLYHYNKQDASAVQLWV----NIVNGDIQD-STRSDLYEYIVDFLTYCLD 538
Query: 639 REVAATEASKILEESSDEDLILQHLGWIADINAVLAVKVLTSEKRINQLSPDKVIAAIDS 698
+E+ T A +L++S + + + K E++ +PD +I+ +
Sbjct: 539 QELVWTHADWLLQKSQE-------------VGVQVFTKRPLDEQQQTSFNPDDIISCL-K 584
Query: 699 KKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQ 750
K + L +YL+ L+ D+ ++HT AL + + G T+
Sbjct: 585 KYPKALVKYLEHLVIDRRLQKEEYHTHLALLYLEEVLRQRAPTGGKDVEATE 636
Score = 118 (46.6 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 69/303 (22%), Positives = 123/303 (40%)
Query: 160 NASTSTGQRLLQKFGSGIKANGVKV-KEEEQHCRGD----NVFAVIIGKRLVLIELVNGS 214
N+ T L+ SG + G E GD V + + +R V + LV
Sbjct: 97 NSITLVNMLNLEPVPSGARIKGATTFAVNENPVNGDPFCVEVCIISVKRRTVQMFLVYED 156
Query: 215 FV-ILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLL 273
V I+KE+ + + + + Y + + TG S +F PP++K +
Sbjct: 157 RVQIVKEVSTTEQPLAVAVDGYFLCLALTTQYIILNYSTGFSQDLFPYCSEEKPPIVKRI 216
Query: 274 SKEQKVLLLVDNVGVFVDAHGQPVGGSLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSG 333
+++ +L +G+F G + + ++ YV+ L + ++
Sbjct: 217 GRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQ 276
Query: 334 ICVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKE 393
Q + F EG I D E G++ +VAT V +P E+QI+DLL + +E
Sbjct: 277 QQKQTLPFK-EGH---ILQDFE---GRV-IVATSKGVYILVPLPLEKQIQDLLANRRVEE 328
Query: 394 AISLAE--ELECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE--TMQPSEVFP 449
A+ LA+ E + M + Q GF+ L F EA + F S+ + ++P
Sbjct: 329 ALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSSQLDVRELISLYP 388
Query: 450 FIM 452
F++
Sbjct: 389 FLL 391
Score = 57 (25.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 40 CQVLIYIGTQSGSLILLSLD----PTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIF 95
C +Y+GT + L+ PT T T +H+ F K PV +
Sbjct: 33 CGRNLYVGTNDCFIYHFLLEEKAMPTGTATFIA--TKQLHRHLGFKK-------PVNELC 83
Query: 96 VLDDVGKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIA 136
+ ++L+L CD + L + L +P+ +KG + A
Sbjct: 84 AASALNRLLVL-CDNSITLVNMLNLEPVPSGARIKGATTFA 123
>ASPGD|ASPL0000003032 [details] [associations]
symbol:avaB species:162425 "Emericella nidulans"
[GO:0007033 "vacuole organization" evidence=IMP] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006995 "cellular response
to nitrogen starvation" evidence=IEA] [GO:0070314 "G1 to G0
transition" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 GO:GO:0005622
EMBL:BN001301 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 EnsemblFungi:CADANIAT00007510
OMA:YFRGRIR Uniprot:C8V1V7
Length = 1124
Score = 135 (52.6 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 34/131 (25%), Positives = 53/131 (40%)
Query: 838 PDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXX 897
P Y LL +YL G +P + A+ +L HG L L+ + +P+
Sbjct: 912 PSIYHTLLSLYLTPPHGYKPQYAPALDILARHGSRLPANSALDLIPESLPVHELEFYFKG 971
Query: 898 XXXXXXXXXXQGQIVHNLSRAVDIDARLARL--------EERSRHVQINDESLCDSCHAR 949
+ +I NL + I R L RSRHV I +E +C CH R
Sbjct: 972 RMRAANTILNESRITANLLKVQTIKTRAELLVGEGTDGRSSRSRHVTITEERVCSVCHKR 1031
Query: 950 LGTKLFAMYPD 960
+G + ++P+
Sbjct: 1032 IGGSVINVFPE 1042
Score = 122 (48.0 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 46/186 (24%), Positives = 81/186 (43%)
Query: 657 DLILQHLGWIADINAVLAVKV-LTSEKRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQ 715
DLIL+ W + L +++ L + L KV+ + ++ RYL+ +I +
Sbjct: 721 DLILEFSEWPIREDPDLGMEIFLADTENAETLPRQKVLDFLQGIDDKLAVRYLEHVIGEL 780
Query: 716 DSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQI 775
+ H LA + ++ SK G+ ++ +E+L
Sbjct: 781 NDLTPDLHQ----RLAVLYLNRLQKHQNSK-----------DGFATEDEYKF-WREKLIT 824
Query: 776 FLQSSDLYDPEDVLDLIEGS--ELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCA 833
L++SD Y P +L ++ E + +AIL+ K+GQ L+I KLED AE+YC
Sbjct: 825 MLKTSDQYSPSKILARLDRDDPEFFEARAILFSKMGQHRQALEIYVFKLEDYVKAEEYCN 884
Query: 834 EIGRPD 839
+ R +
Sbjct: 885 HLHRTE 890
Score = 72 (30.4 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 37/144 (25%), Positives = 63/144 (43%)
Query: 265 SCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGGSLV-FRKSPDAVGELSMYVVVLRG- 322
S P L E ++LL D F D G +G + + +P +G +++ L
Sbjct: 272 SAPKPLATRLSEGQILLAKDINTQFTDIDGNSLGRRQIPWSSAPADIGYSYPFLLALHDS 331
Query: 323 --GKMELYHKKSGICVQAVTFGGEGGGQCIA--TDEECGAGKLLVVATPTKVICYQKVPS 378
G +E+ + ++ +Q+++ IA T AGK +VA+ + + +
Sbjct: 332 MKGILEVRNPETLSLLQSISLPS-ASTMHIAQPTISLAHAGKGFLVASDRIIWRMEALGY 390
Query: 379 EEQIKDLLRKKDFKEAISLAEELE 402
+ QI L+ K EAISLA LE
Sbjct: 391 DSQIDSLVEKGYLDEAISLAGMLE 414
Score = 58 (25.5 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 545 VDTLL--MYLYRALNRVHDMENLAPSENSCIVEELETLLDESG-HLRTLAFLYASKGMSS 601
VDT L +Y+Y + + +A N C E + L+E+G H + FLY K M
Sbjct: 625 VDTTLFRVYMYATPSLAGSLFRIA---NFCDPEVVMEKLEETGRHNDLIDFLYGKK-MHR 680
Query: 602 KALAIWRVLARNYS 615
+AL + R ++ S
Sbjct: 681 QALELLRKFGQSES 694
Score = 47 (21.6 bits), Expect = 4.4e-15, Sum P(5) = 4.4e-15
Identities = 33/151 (21%), Positives = 58/151 (38%)
Query: 493 FLRKAGVETAVDDGFLSNPPSRAEL--------LELAIRNITRYLEVSRKKELTILVKEG 544
FLR + D G + P A L L+LA+R + YL R++ L +G
Sbjct: 521 FLRSRDEGSGSDSGSVRGKPEEARLEKPLTGKDLKLAVRELQAYLADVRRRFQRFLNPDG 580
Query: 545 VDTLLMYLYRALNRVHD--MENLAPSENSCIVEELETLLDESGHLRTLAF---LYASKGM 599
+ + A + D M+ L E+ + E L +++ + T F +YA+ +
Sbjct: 581 SLKIDPQTHAAKDEYTDSVMKLLDVGEDDEDYDLGEKLREKARLVDTTLFRVYMYATPSL 640
Query: 600 SSKALAIWRVLARNYSSGLWKDPAVENDLLD 630
+ I ++ NDL+D
Sbjct: 641 AGSLFRIANFCDPEVVMEKLEETGRHNDLID 671
Score = 45 (20.9 bits), Expect = 3.6e-16, Sum P(5) = 3.6e-16
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 220 EIQCMDGVKTMVWLNDS-IIVGTVNGYSL 247
E+ + G+KT+ W++ + ++ G + + L
Sbjct: 200 ELTLVSGIKTLTWVSGTRLVAGLSSNFVL 228
Score = 45 (20.9 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 28/125 (22%), Positives = 51/125 (40%)
Query: 504 DDGFLSNPPSRAELLELAIRNITRYLEVSRKK-ELTILVKEGVDTLLMYLYRALNRVHDM 562
D+G +NP ++A+ +L +R + ++ SR K E ++KE LL+ L +HD+
Sbjct: 85 DNG-TNNPVAKAKRTDL-LRELEKF---SRYKIEQLAIIKEA--KLLVSLSGGYVSIHDL 137
Query: 563 ENLAPSENSCIVEELETLLDESGHLRTLAFLYASKGMSSKALAIWRVLARNYSSGLWKDP 622
+ E + S + G+ S + + R W+D
Sbjct: 138 QTYELQEQLTRTKGAVAFAVTSNIVND-----PETGVPSIVSRLAVAVKRKIMLWSWRDM 192
Query: 623 AVEND 627
+END
Sbjct: 193 ELEND 197
Score = 43 (20.2 bits), Expect = 1.4e-13, Sum P(6) = 1.4e-13
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 499 VETAVDDGFLSNPPSRAELLELAI-RNITRYLEVSRKKELTILVKEGVDTLLMYL 552
+++ V+ G+L S A +LE A+ +N + R +E+ + EG+ L YL
Sbjct: 394 IDSLVEKGYLDEAISLAGMLEDALLKN-----KEGRIREIKLEKAEGMFRLRRYL 443
Score = 42 (19.8 bits), Expect = 1.4e-13, Sum P(6) = 1.4e-13
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 380 EQIKDLLRKKDFKEAISLAEELECEG----EMAKEMLSFVHAQIGFLLLFD 426
+ +K +L ++ E +SL + + +A+ +S HA GFL+ D
Sbjct: 330 DSMKGILEVRN-PETLSLLQSISLPSASTMHIAQPTISLAHAGKGFLVASD 379
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(5) = 3.1e-07
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 787 DVLDLIEGSELWLEKAILYRKLGQ 810
D++D + G ++ + L RK GQ
Sbjct: 668 DLIDFLYGKKMHRQALELLRKFGQ 691
Score = 39 (18.8 bits), Expect = 9.9e-13, Sum P(5) = 9.9e-13
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 54 ILLSLDPTAATTLHVPNTTPSQQH 77
+L S+ +A+T+H+ T S H
Sbjct: 346 LLQSISLPSASTMHIAQPTISLAH 369
>UNIPROTKB|E2RRH8 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030897 "HOPS complex" evidence=IEA]
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 OMA:CLGPIKM
EMBL:AAEX03016084 Ensembl:ENSCAFT00000037504 Uniprot:E2RRH8
Length = 887
Score = 121 (47.7 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 55/231 (23%), Positives = 97/231 (41%)
Query: 658 LILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQD 716
LI + W+ +K+ T + + L D+V+ + + YL+ +I +
Sbjct: 554 LIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLCFLVENFKGLAIPYLEHVIHVWE 613
Query: 717 SDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETR-SSGYGKNSIFQCPVQERLQI 775
++FH + L ++ +E G+T +G + + + + +L I
Sbjct: 614 ETGSRFHNCL-IQLYCEKVQGLMKEY---LLSFPAGKTPVPAGEEEGELGE--YRRKLLI 667
Query: 776 FLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEI 835
FL+ S YDP ++ L E+A+L ++G+ L I L+D++ AE+YC +
Sbjct: 668 FLEISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKH 727
Query: 836 ------GRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLE 880
G D Y+ LL MYL S + + LL LQVLE
Sbjct: 728 YDQNRDGNKDVYLSLLRMYL-SPPSVHCLGPIKLELLEPQANLQAALQVLE 777
Score = 111 (44.1 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 70/296 (23%), Positives = 123/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 114 KAKGASLFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 173
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ L+ + KV + D++ V ++
Sbjct: 174 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 231
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 232 EEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 288
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE E ++
Sbjct: 289 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKEDSDSEKQQ 344
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 345 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 399
Score = 102 (41.0 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 35/145 (24%), Positives = 57/145 (39%)
Query: 836 GRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLHNHGESLDPLQVLETLS 883
G D Y+ LL MYL G EP +AA+++L H LD + + L
Sbjct: 734 GNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLP 793
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+ + + Q++ NL A + + R+ + I +E +C
Sbjct: 794 ANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVC 853
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKC 968
C ++G FA YP+ +V Y C
Sbjct: 854 MVCKKKIGNSAFARYPNGVVVHYFC 878
Score = 78 (32.5 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 453 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 507
Query: 592 FLYASKGMSSKALAI 606
LY KG+ KAL +
Sbjct: 508 ILYEKKGLHEKALQV 522
Score = 56 (24.8 bits), Expect = 3.8e-14, Sum P(4) = 3.8e-14
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHV--PNTTPSQQ-HVSFLKTVSVADSPVESIFVLDDV 100
+ +GT+ G L+L + AA V P + + V+ K+ ++ I V+
Sbjct: 28 LLVGTKQGHLLLYRIRKDAAVLTGVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQF 87
Query: 101 GKVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
K+L+ + +++ D L Q + + KG S+
Sbjct: 88 -KILVSLLENNIYVHDLLTFQQITTVSKAKGASL 120
Score = 40 (19.1 bits), Expect = 1.9e-08, Sum P(4) = 1.9e-08
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 786 EDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-------LEDSEAAEQYCAEIGRP 838
E+ +++ + + E ILY K G LQ+L + L+ E QY +G
Sbjct: 491 EESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTE 550
Query: 839 DAYM 842
+ ++
Sbjct: 551 NLHL 554
>TAIR|locus:2115355 [details] [associations]
symbol:EMB2754 "EMBRYO DEFECTIVE 2754" species:3702
"Arabidopsis thaliana" [GO:0005083 "small GTPase regulator
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] [GO:0006623 "protein
targeting to vacuole" evidence=RCA] [GO:0007033 "vacuole
organization" evidence=RCA] [GO:0042732 "D-xylose metabolic
process" evidence=RCA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0009506
GO:GO:0006886 EMBL:CP002687 GO:GO:0016192 GO:GO:0005622
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 OMA:CLGPIKM EMBL:AY099879 IPI:IPI00546737
RefSeq:NP_195381.6 UniGene:At.44832 ProteinModelPortal:Q8L5Y0
PRIDE:Q8L5Y0 EnsemblPlants:AT4G36630.1 GeneID:829815
KEGG:ath:AT4G36630 TAIR:At4g36630 HOGENOM:HOG000083666
PhylomeDB:Q8L5Y0 ProtClustDB:CLSN2694231 Genevestigator:Q8L5Y0
Uniprot:Q8L5Y0
Length = 1000
Score = 153 (58.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 60/249 (24%), Positives = 116/249 (46%)
Query: 213 GSFVILKEIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKL 272
G FV +++ D VK++ W ++I +G Y + + G +F V+ P ++ L
Sbjct: 141 GGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVILNTANGTLSEVFPSGRVAPPLVISL 200
Query: 273 LSKEQKVLLLVDNVGVFVDAHGQPVGGSLV-FRKSPDAVGELSMYVVVLRGGKMELYHKK 331
S E ++L +N+GVFVD +G+ + + + ++P ++ + Y + L ++E+ +
Sbjct: 201 PSGE--LILGKENIGVFVDQNGKLLQTERICWSEAPTSIVIQNPYAIALLPRRVEVRLLR 258
Query: 332 SGI-CVQAVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKD 390
S +Q + + + + ++ ++V V V QI L +
Sbjct: 259 SPYPLIQTIVL--QNIRRLVKSNNA------VIVGLDNSVYVLFPVSIGAQIVQLTASGN 310
Query: 391 FKEAISLAEEL---ECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSE------- 440
F+EA++L + L E AKE S +H + L + +EEA++HFL S+
Sbjct: 311 FEEALALCKVLPPDESSLRAAKE--SSIHTRFAHYLFENGSYEEAMEHFLASQVDITHVL 368
Query: 441 TMQPSEVFP 449
+M PS + P
Sbjct: 369 SMYPSIILP 377
Score = 112 (44.5 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 816 QILALK-LEDSEAAEQYCAEIGRPDAYMQLLDMYLDSQDGKEP-MFKAAVRLLHNHGESL 873
+I+A++ ED + GR D +D ++G M + LL E +
Sbjct: 831 KIVAIEGAEDMRVGLSSSTDSGRSD-----VDTEEPLEEGDSTVMISEVLDLLSQRWERI 885
Query: 874 DPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSR 933
+ Q L+ L + L + ++ +L ++ ++ + + R
Sbjct: 886 NGAQALKLLPRETKLHNLLPFLAPLLRNSSEAHRNFSVIKSLRQSENLQVKEELYKHRKG 945
Query: 934 HVQINDESLCDSCHARLGTKLFAMYPDD-TIVCYKCYR-RQG 973
Q+ ES+C C+ ++GT +FA+YP+ T+V + C+R QG
Sbjct: 946 VAQVTSESMCSLCNKKIGTSVFAVYPNGKTLVHFVCFRDSQG 987
Score = 102 (41.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 768 PVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEA 827
P +++L L+S Y P+ +L + L+ E+A++ K+ Q L L I KL +
Sbjct: 696 PERKKLLSALESISGYSPQPLLKRLPRDALYEERAVILGKMNQHELALSIYVHKLHAPDL 755
Query: 828 AEQYCAEI---------GRPDA--YMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPL 876
A YC I G+P + Y+ +L +YL+ + + K V L ES D
Sbjct: 756 ALAYCDRIYESVTYLPSGKPSSNIYLTVLQIYLNPKKSAKDFAKRIVAL--GSFESSDTT 813
Query: 877 QVLETL 882
++++++
Sbjct: 814 KMMDSV 819
>MGI|MGI:2443189 [details] [associations]
symbol:Vps39 "vacuolar protein sorting 39 (yeast)"
species:10090 "Mus musculus" [GO:0005083 "small GTPase regulator
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030897 "HOPS
complex" evidence=ISO] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 MGI:MGI:2443189
GO:GO:0006886 GO:GO:0016192 GO:GO:0031902 GO:GO:0005765
GO:GO:0030897 GO:GO:0005083 CleanEx:MM_PLDN InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 eggNOG:NOG241434 CTD:23339
HOGENOM:HOG000046531 HOVERGEN:HBG056493 OMA:CLGPIKM EMBL:AF281050
EMBL:AF281051 EMBL:BC007479 IPI:IPI00154020 IPI:IPI00227698
RefSeq:NP_671495.1 RefSeq:NP_849182.1 UniGene:Mm.246131
ProteinModelPortal:Q8R5L3 IntAct:Q8R5L3 STRING:Q8R5L3
PhosphoSite:Q8R5L3 PaxDb:Q8R5L3 PRIDE:Q8R5L3
Ensembl:ENSMUST00000028752 Ensembl:ENSMUST00000102501 GeneID:269338
KEGG:mmu:269338 InParanoid:Q8R5L3 OrthoDB:EOG4CRKZD NextBio:392787
Bgee:Q8R5L3 CleanEx:MM_VPS39 Genevestigator:Q8R5L3
GermOnline:ENSMUSG00000027291 Uniprot:Q8R5L3
Length = 886
Score = 114 (45.2 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 53/230 (23%), Positives = 93/230 (40%)
Query: 658 LILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQD 716
LI + W+ +K+ T + + L D+V+ + + YL+ +I +
Sbjct: 553 LIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIENFKALAIPYLEHIIHVWE 612
Query: 717 SDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIF 776
+QFH + ++ S G G G+ ++ ++L +F
Sbjct: 613 ETGSQFHNCLIQLYCEKVQSLMKDYLLSLPTGKSPVPAGEEG-GELGEYR----QKLLMF 667
Query: 777 LQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEI- 835
L+ S YDP ++ L E+A+L ++G+ L I L+D++ A++YC +
Sbjct: 668 LEISSHYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTKMAKEYCHKHY 727
Query: 836 -----GRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLE 880
G D Y+ LL MYL S + + LL LQVLE
Sbjct: 728 DQNKEGNKDVYLSLLRMYL-SPPSIHCLGPIKLELLEPQANLQAALQVLE 776
Score = 110 (43.8 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 70/296 (23%), Positives = 123/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 113 KAKGASLFTCDLQHTETGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 172
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ L+ + KV + D++ V ++
Sbjct: 173 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 230
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y+V + +E+ + + VQ++ + I
Sbjct: 231 EEGICTQKCALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLEPRLLVQSIELQRP---RFI 287
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE + ++
Sbjct: 288 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQ 343
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 344 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 398
Score = 101 (40.6 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 35/145 (24%), Positives = 57/145 (39%)
Query: 836 GRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLHNHGESLDPLQVLETLS 883
G D Y+ LL MYL G EP +AA+++L H LD + + L
Sbjct: 733 GNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYSKLDTTKAINLLP 792
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+ + + Q++ NL A + + R+ + I +E +C
Sbjct: 793 ANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVC 852
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKC 968
C ++G FA YP+ +V Y C
Sbjct: 853 MVCKKKIGNSAFARYPNGVVVHYFC 877
Score = 78 (32.5 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 452 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 506
Query: 592 FLYASKGMSSKALAI 606
LY KG+ KAL +
Sbjct: 507 ILYEKKGLHEKALQV 521
Score = 53 (23.7 bits), Expect = 5.2e-13, Sum P(4) = 5.2e-13
Identities = 19/93 (20%), Positives = 42/93 (45%)
Query: 44 IYIGTQSGSLILLSL--DPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVG 101
+ +GT+ G L+L + D A + + ++ V+ K+ ++ I V+
Sbjct: 28 LLVGTKQGHLLLYRIRKDVVPADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQF- 86
Query: 102 KVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
K+L+ + +++ D L Q + + KG S+
Sbjct: 87 KILVSLLENNIYVHDLLTFQQITTVSKAKGASL 119
Score = 40 (19.1 bits), Expect = 5.9e-08, Sum P(4) = 5.9e-08
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 786 EDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-------LEDSEAAEQYCAEIGRP 838
E+ +++ + + E ILY K G LQ+L + L+ E QY +G
Sbjct: 490 EESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTE 549
Query: 839 DAYM 842
+ ++
Sbjct: 550 NLHL 553
>UNIPROTKB|E2RG39 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 CTD:23339
EMBL:AAEX03016084 RefSeq:XP_544640.2 Ensembl:ENSCAFT00000015964
GeneID:487516 KEGG:cfa:487516 NextBio:20861099 Uniprot:E2RG39
Length = 875
Score = 121 (47.7 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 55/231 (23%), Positives = 97/231 (41%)
Query: 658 LILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQD 716
LI + W+ +K+ T + + L D+V+ + + YL+ +I +
Sbjct: 542 LIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLCFLVENFKGLAIPYLEHVIHVWE 601
Query: 717 SDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETR-SSGYGKNSIFQCPVQERLQI 775
++FH + L ++ +E G+T +G + + + + +L I
Sbjct: 602 ETGSRFHNCL-IQLYCEKVQGLMKEY---LLSFPAGKTPVPAGEEEGELGE--YRRKLLI 655
Query: 776 FLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEI 835
FL+ S YDP ++ L E+A+L ++G+ L I L+D++ AE+YC +
Sbjct: 656 FLEISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKH 715
Query: 836 ------GRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLE 880
G D Y+ LL MYL S + + LL LQVLE
Sbjct: 716 YDQNRDGNKDVYLSLLRMYL-SPPSVHCLGPIKLELLEPQANLQAALQVLE 765
Score = 111 (44.1 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 70/296 (23%), Positives = 123/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ L+ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 220 EEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE E ++
Sbjct: 277 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKEDSDSEKQQ 332
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 333 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 387
Score = 102 (41.0 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 35/145 (24%), Positives = 57/145 (39%)
Query: 836 GRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLHNHGESLDPLQVLETLS 883
G D Y+ LL MYL G EP +AA+++L H LD + + L
Sbjct: 722 GNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLP 781
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+ + + Q++ NL A + + R+ + I +E +C
Sbjct: 782 ANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVC 841
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKC 968
C ++G FA YP+ +V Y C
Sbjct: 842 MVCKKKIGNSAFARYPNGVVVHYFC 866
Score = 78 (32.5 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 441 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 495
Query: 592 FLYASKGMSSKALAI 606
LY KG+ KAL +
Sbjct: 496 ILYEKKGLHEKALQV 510
Score = 43 (20.2 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 19/91 (20%), Positives = 39/91 (42%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + A T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIRKDAGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
L+ + +++ D L Q + + KG S+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASL 108
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 786 EDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-------LEDSEAAEQYCAEIGRP 838
E+ +++ + + E ILY K G LQ+L + L+ E QY +G
Sbjct: 479 EESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTE 538
Query: 839 DAYM 842
+ ++
Sbjct: 539 NLHL 542
>WB|WBGene00011625 [details] [associations]
symbol:vps-39 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] InterPro:IPR000547
InterPro:IPR001180 InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 GO:GO:0009792 GO:GO:0002009 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 GO:GO:0008219 GO:GO:0005622
GO:GO:0005083 EMBL:Z81589 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 GeneTree:ENSGT00530000063596
OMA:CLGPIKM GeneID:179902 KEGG:cel:CELE_T08G5.5 UCSC:T08G5.5b
CTD:179902 HOGENOM:HOG000012854 NextBio:907334
RefSeq:NP_001041164.1 ProteinModelPortal:Q1ZXS5 STRING:Q1ZXS5
EnsemblMetazoa:T08G5.5b WormBase:T08G5.5b InParanoid:Q1ZXS5
ArrayExpress:Q1ZXS5 Uniprot:Q1ZXS5
Length = 926
Score = 122 (48.0 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 653 SSDEDLILQHLGWIADINAVLAVKVLTSEKR--INQLSPDKVIAAIDSKKVEILQRYLQW 710
+S+ LIL++ W+ N V++ TS++ L+ V+ + S+ + L YL+
Sbjct: 562 NSNLPLILKYAKWVLAKNLEAGVQIFTSDETEMARNLNRKAVVEFLKSECPDALIPYLEH 621
Query: 711 LIEDQDSDDTQFH-TL---YAL---SLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + + FH TL Y +L K + AF + + T+ G+ G+
Sbjct: 622 VIFKWEEPSSYFHETLLEFYVARVNTLFKDYVHAFPDAFSDENI-TRAGDED----GELG 676
Query: 764 IFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLE 823
+++ +RL FL+ S Y P+ VL + + E+A++ +L Q L I L+
Sbjct: 677 LYR----KRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQALAIYVNTLK 732
Query: 824 DSEAAEQYC 832
+ AAE+YC
Sbjct: 733 NVPAAEEYC 741
Score = 98 (39.6 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 26/127 (20%), Positives = 52/127 (40%)
Query: 849 LDSQDGKEPMFKAAVRLLHNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQ 908
++S +P A+++L H + +D + L L PL++ I
Sbjct: 797 VNSTSSYQPDVNTAIKILAKHADKIDTVGALNMLPATTPLRVVFSAINAVIQTTGRQAST 856
Query: 909 GQIVHNLSRAVDIDARLARLEE-RSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYK 967
++ ++S+ + +L R + +S + +N S C C ++ F YPD +
Sbjct: 857 RKMEKSVSQCA-MSKKLERKNKAQSTKIIVNFSSECVVCEKKIAVSAFVRYPDGRLAHLY 915
Query: 968 CYR-RQG 973
C+ QG
Sbjct: 916 CHNDSQG 922
Score = 70 (29.7 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 534 KKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLAFL 593
+K +L VDT L+ Y + + N+C E+ + +L+ G LR+L L
Sbjct: 460 EKAKLLLTLRVVDTTLLKCYIKTKPMLVDSLIRLQSNACTFEDAKKILESEGRLRSLFIL 519
Query: 594 YASKGMSSKALAIW 607
Y ++ AL ++
Sbjct: 520 YETRKKHEMALDLF 533
Score = 63 (27.2 bits), Expect = 9.0e-13, Sum P(4) = 9.0e-13
Identities = 48/209 (22%), Positives = 85/209 (40%)
Query: 253 GQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQ-P---VGGSLVFRKSPD 308
G +G + L + +C P + + ++V + + + V D GQ P + F + P
Sbjct: 200 GWNGFVTRLLNFNCQPGIVPMIDRRRVAFVRNEIVVTTDIWGQRPANVLSDEYKFSEVPM 259
Query: 309 AVGELSMYVV-VLRGGKMELYHKKSGICVQAVTFGGEGGGQCIATDEECGA-GKLLVVAT 366
+ S Y+V +L G++E+ G VQ ++ + C GA G++ V A
Sbjct: 260 QIVYDSPYLVGMLSKGRVEVRSIFDGQLVQTMSLP-KAMTLC------SGARGQVFVAAL 312
Query: 367 PTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKEMLSFVHAQIGFLLLFD 426
I + + L++++ F+ AI LAE A+E + + L
Sbjct: 313 SDIWILDTSQNLRKNVSHLIQERHFELAIQLAENSNL---FAEEQKLEIKKKAALNLFNQ 369
Query: 427 LHFEEAVDHFLHSETMQPSEVFPFIMRDP 455
F+E+ F +T SEV I P
Sbjct: 370 KKFDESFALFGEIKT-DISEVLSIIRMFP 397
Score = 37 (18.1 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 509 SNPPSRAELLELAIRNITRYLEVSRKKELTILVK 542
S+ P + AI+ I YL+ L +++K
Sbjct: 537 SSRPDADPFFDDAIQQIVEYLQSLGNSNLPLILK 570
>FB|FBgn0038593 [details] [associations]
symbol:CG7146 species:7227 "Drosophila melanogaster"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 EMBL:AE014297
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 eggNOG:NOG241434
OMA:CLGPIKM EMBL:AY060674 RefSeq:NP_650702.1 UniGene:Dm.1238
MINT:MINT-294241 EnsemblMetazoa:FBtr0083601 GeneID:42192
KEGG:dme:Dmel_CG7146 UCSC:CG7146-RA FlyBase:FBgn0038593
InParanoid:Q9VEA2 OrthoDB:EOG4GB5N4 GenomeRNAi:42192 NextBio:827606
Uniprot:Q9VEA2
Length = 876
Score = 166 (63.5 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 75/330 (22%), Positives = 133/330 (40%)
Query: 658 LILQHLGWIADINAVLAVKVLTSEK-RINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQD 716
LI + W+ + N + + T E + L KV+ SK ++ YL+ +I +
Sbjct: 555 LIFEFADWVLNDNPEEGLTIFTDELIEVESLPRAKVLDFFISKHKALVIPYLEHVITEWK 614
Query: 717 SDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPVQERLQIF 776
+T H + L K E + + G ++ E P++ +L
Sbjct: 615 DGNTLLHNV----LLKQYREKVQRLLAQQEKGEEVPEL------------IPMRAKLYKM 658
Query: 777 LQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCAEIG 836
L+ S+ Y P+ +L+ + L E+A++ +L + VL I L D A Y
Sbjct: 659 LEESNDYSPDRLLEEFPTNILLEERALILGRLKKHDNVLSIYIHVLGDVAKATAYAEAHY 718
Query: 837 RPDAYM--QLLDMYL--DSQ---DGK--EPMF-----KAAVRLLHNHGESLDPLQVLETL 882
+ D ++ L+ L +Q DG P F + A+ +L+ H +DP ++ E L
Sbjct: 719 KEDKHIFHTLIKCILIPPTQPLYDGVPLHPDFSQVNREVALEILNTHATRIDPFEIFEHL 778
Query: 883 SPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESL 942
DMP+ + + Q++ A A E+R+ ++N+ S+
Sbjct: 779 PDDMPMPQLEKYLEKSIRKMMADKHEMQMMCGFLEAESTRLENALEEQRNISFELNESSV 838
Query: 943 CDSCHARLGTK-LFAMYPDDTIVCYKCYRR 971
C C R T+ F YP+ IV C+ R
Sbjct: 839 CSECKKRFQTQSAFVRYPNGHIVHLSCHDR 868
Score = 75 (31.5 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 509 SNPPSRAELLELAIRNITRYLEVSRKKELTIL--VKEGVDTLLMYLYRALNRVHDMEN-- 564
S P LE A + YL +R++E+ L K +LL + L + + N
Sbjct: 419 STPALEDSDLENAYLALIEYLAWARQREVVKLRDTKSSSKSLLEIIDTTLLKCYLQTNDS 478
Query: 565 -LAP--SENSCIVEELETLLDESGHLRTLAFLYASKGMSSKALAIWR 608
+AP N C +EE E L + + L LY KG +AL + R
Sbjct: 479 LVAPLLRLNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKLLR 525
Score = 58 (25.5 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDV 100
+ +GT+SG LI+ S+D + + N S++ ++ ++ ++ + +FVL D+
Sbjct: 27 VILGTRSGQLIMYSVDEETGVDMRMFNKNFSRKPITQMEVIASENL----LFVLTDL 79
Score = 48 (22.0 bits), Expect = 1.5e-12, Sum P(4) = 1.5e-12
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 221 IQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQS----GVIFTLPDVSCPPMLKLLSKE 276
I+ D +T+ W+ ++ VG + Y ++ ++G++ + T +S P + L+ +
Sbjct: 153 IELSDVPRTLCWVGHAVCVGFKDEYVVYD-ISGKAPKKHNLFLTSSSISRDPCICLI-RN 210
Query: 277 QKVLLLVDNVGVFVD 291
+ + D+ V VD
Sbjct: 211 NMLGISKDSYLVVVD 225
Score = 42 (19.8 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 230 MVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPDV 264
+VW ++ VG VN + G+ ++ T+P++
Sbjct: 264 LVW-DEPFAVGRVNNAIEVRSLVGKDTLVQTIPEL 297
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 12/62 (19%), Positives = 33/62 (53%)
Query: 227 VKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTL--PDVSCPPM--LKLLSKEQKVLLL 282
++++ + +I+GT +G + V ++GV + + S P+ +++++ E + +L
Sbjct: 17 IESIAAYGNHVILGTRSGQLIMYSVDEETGVDMRMFNKNFSRKPITQMEVIASENLLFVL 76
Query: 283 VD 284
D
Sbjct: 77 TD 78
Score = 39 (18.8 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 621 DPAV--ENDLLDGCADVMSGREVAATEASKILEESSDEDLILQHLGWIADINAVLAVKVL 678
DP+ E+D ++ DV + + + +L S DL+ + +N + V+ L
Sbjct: 225 DPSQYKESDGINNSTDVRPAAMDSNSSLTPLLWSSPLLDLVWDEPFAVGRVNNAIEVRSL 284
Query: 679 TSEKRINQLSPD 690
+ + Q P+
Sbjct: 285 VGKDTLVQTIPE 296
>ZFIN|ZDB-GENE-080530-2 [details] [associations]
symbol:vps39 "vacuolar protein sorting 39 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA;IMP] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0001654 "eye development"
evidence=IMP] [GO:0048066 "developmental pigmentation"
evidence=IMP] InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637
Pfam:PF00780 PROSITE:PS50219 ZFIN:ZDB-GENE-080530-2 GO:GO:0006886
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 GO:GO:0048066
GO:GO:0001654 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 EMBL:CU929354
EMBL:CU655820 EMBL:CU928140 IPI:IPI00884691
Ensembl:ENSDART00000113644 ArrayExpress:F1RCV6 Bgee:F1RCV6
Uniprot:F1RCV6
Length = 875
Score = 160 (61.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 106/462 (22%), Positives = 176/462 (38%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
SRKK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 440 SRKKLLQI-----IDTTLLKCYLHTNVALVSPLLRLENNHCHIEESEYVLKKAHKYSELI 494
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL + +L ++ + P + G E ++
Sbjct: 495 ILYEKKGLHQKALQV--LLDQSTKAN---SP-------------LKGHERTVQYLQRLGL 536
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
E+ +I + W+ I +K+ T + + L D+V+ + E+ YL+
Sbjct: 537 ENLG--IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEGFKELAIPYLEH 594
Query: 711 LIEDQDSDDTQFHT----LY---ALSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I D +FH LY L K+ + E + A G + GE G +N
Sbjct: 595 IIHMWDETRPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEKGEL---GEFRNK 651
Query: 764 IFQ-CPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK- 821
+ V + + SD P D L+E L L + + ++ L + + LK
Sbjct: 652 LLSFLEVSSSYEPEILISDF--PFD--GLLEERALLLGRMGKH----EQALFIYVHILKD 703
Query: 822 --LEDSEAAEQYC-AEIGRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLL 866
+ + Y A G D Y+ LL MYL D G EP +AA+ +L
Sbjct: 704 TRMAEEYCHGHYDPATNGNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALNVL 763
Query: 867 HNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLA 926
H L+ + + L + ++ + Q++ +L +A + +
Sbjct: 764 QLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEE 823
Query: 927 RLEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
R+ + I DE C C ++G FA YP+ +V Y C
Sbjct: 824 RIFHQQVKCVITDEKTCRVCKKKIGNSAFARYPNGVVVHYFC 865
Score = 83 (34.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 53/251 (21%), Positives = 104/251 (41%)
Query: 220 EIQCMDGVKTMVWLNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQK 278
++ D K+M W +SI VG Y L + G+ + P P++ L+ + K
Sbjct: 149 DVTAPDIPKSMAWCENSICVGFKRDYYLIR-MDGRGSIKELFPTGKQLEPLVAPLA-DGK 206
Query: 279 VLLLVDNVGVFVDAHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQ 337
V + D++ V ++ G +L + P A+ Y++ + +E+ + + VQ
Sbjct: 207 VAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVEPRLLVQ 266
Query: 338 AVTFGGEGGGQCIATDEECGAGKLLVVATPTKVICYQKVPSE--EQIKDLLRKKDFKEAI 395
+V + I + AG +V + ++ VP QI+ LL+ K F+ A+
Sbjct: 267 SVELQRP---RFITS-----AGSNVVYVASNHFV-WRLVPVSIASQIRQLLQDKQFELAL 317
Query: 396 SLAEELECEGEMAKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIM 452
LA+ + ++ + + F L F++++ F T P+ V +P ++
Sbjct: 318 QLAKMKDDSDTDKRQQIHHIQNLFAFNLFCQKRFDDSMQGFAKLGT-DPTHVIGLYPDLL 376
Query: 453 RDPNRWSLLVP 463
R L P
Sbjct: 377 PSDYRKQLHYP 387
Score = 53 (23.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 22/106 (20%), Positives = 46/106 (43%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+ + A T T + + +F K + + +FV+ K+
Sbjct: 28 LLVGTKPGHLLQYRIKKDAGTNRF--EVTLEKSNKNFSKKI-------QQLFVVSQY-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIAKRIRTSDSESTNL 149
L+ + + + D L Q + + KG ++ A ++ S+S L
Sbjct: 78 LVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQSESGEAKL 123
>POMBASE|SPAC23H4.14 [details] [associations]
symbol:vam6 "guanyl-nucleotide exchange factor, HOPS
complex subunit Vam6 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0000324 "fungal-type vacuole" evidence=ISO] [GO:0000329
"fungal-type vacuole membrane" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0030897 "HOPS complex" evidence=ISO] [GO:0042144
"vacuole fusion, non-autophagic" evidence=ISO] [GO:0048278 "vesicle
docking" evidence=ISS] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR001180 InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 PomBase:SPAC23H4.14 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0000329 GO:GO:0030897
GO:GO:0017112 GO:GO:0006995 GO:GO:0070314 GO:GO:0042144
GO:GO:0048278 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 PIR:T38314 RefSeq:NP_593392.1
ProteinModelPortal:O13955 EnsemblFungi:SPAC23H4.14.1 GeneID:2541859
KEGG:spo:SPAC23H4.14 eggNOG:NOG241434 OMA:HITRISD OrthoDB:EOG405W8J
NextBio:20802946 Uniprot:O13955
Length = 905
Score = 166 (63.5 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 75/291 (25%), Positives = 120/291 (41%)
Query: 698 SKKVEILQRYLQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSKAFGTQMGETRSS 757
S KV I+ YL+ L+ D +DT F T AL K +E EE + K
Sbjct: 636 SYKVSII--YLEKLLLDNKFNDTVFPTRLALLYLKRILE-LEETTDFK------------ 680
Query: 758 GYGKNSIFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKA--ILYRKLGQETLVL 815
+F+ + E+L+ +L +S YD VL I + +L ILYR+L + L
Sbjct: 681 ---NQEVFKQTI-EKLEDYLTNSKQYDANVVLQEINSQDEFLSTVSIILYRRLSRHQDAL 736
Query: 816 QILALKLEDSEAAEQYCAEI----GRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGE 871
+ L D E A YC + G + Y LL S++ K + + +
Sbjct: 737 DVYLKILNDWEGALSYCNSVYSIDGETEPYYMLLAEI--SKNYKSGSLNI-LDFITKYSS 793
Query: 872 SLDPLQVLETLSPDMPLQ----LASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLAR 927
LD +V L ++ ++ L S Q ++ R D++ L +
Sbjct: 794 RLDLNRVFPLLPKNISMKSYHSLFSSQFRQLFEELSNKETQSKLYQK--RLEDLNEELTK 851
Query: 928 LEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKCYRRQGESTSI 978
+ RS V I E C CH RLG + +++PD ++V Y C ++ S +
Sbjct: 852 V--RSEKVVITREKTCLFCHKRLGKSVISIFPDGSVVHYGCAKKYVSSNHL 900
Score = 66 (28.3 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 52/218 (23%), Positives = 89/218 (40%)
Query: 531 VSRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTL 590
V+++K I V+ +DT L +Y ++ + +L N C +ET L + R L
Sbjct: 480 VAKEKLEKIAVQ--IDTTLFLIYM-ISSPALVGSLLRLPNRCETSVVETNLLSAKMYREL 536
Query: 591 AFLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKIL 650
Y K + AL + L D + L G ++ S E + K+
Sbjct: 537 VEYYYGKSLHEAALDLLTKLC---------DEPTDTLSLKGKSNTTSKYEPILSYLEKLS 587
Query: 651 EESSDEDLILQHLGWIADINAVLAVKVLTSEK-RINQLSPDKVIAAID--SKKVEILQRY 707
E + LI ++ + ++ + E + +S V+ ++ S KV I+ Y
Sbjct: 588 PEL--DHLIFKYSRVPLSEDPQNSIVIFIDENSEASTISKGVVLKYLETISYKVSII--Y 643
Query: 708 LQWLIEDQDSDDTQFHTLYALSLAKSAIEAFEEESGSK 745
L+ L+ D +DT F T AL K +E EE + K
Sbjct: 644 LEKLLLDNKFNDTVFPTRLALLYLKRILE-LEETTDFK 680
Score = 56 (24.8 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 47/235 (20%), Positives = 94/235 (40%)
Query: 190 HCR-----GDNVFAVIIGKRLVLIELVNGSFVIL-KEIQCMDGVKTMVWLNDS-IIVGTV 242
HC+ GD + + K L + E+ S L K I D +++ W++ + I+V
Sbjct: 106 HCQNMCLYGDELIVLSSKKNLEIYEIQKNSKPNLTKTISLNDRPRSLAWVSPTMILVSLS 165
Query: 243 NGYSLFSCVTG----------QS-----GVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVG 287
N + + T QS G+ + + + + +VLL D+ G
Sbjct: 166 NDFCAVNTETSRISSLNLAWQQSSSLGLGISYIGMSIKSNKLHITRISDDEVLLSKDSQG 225
Query: 288 VFVDAHGQPVGGS-LVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGG 346
+ V+ V + L + P AV S Y++ L + +++K++ +Q + G
Sbjct: 226 LLVNLKSLQVSRNPLRWPTVPQAVIYNSPYIITLHNQYIYIWNKETYAMIQQI------G 279
Query: 347 GQCIATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEEL 401
I + C + ++ + + QI+ LL ++ EAIS+ ++
Sbjct: 280 ISNIYSTFSCHKNTFFTSNSYVWILTPEDFSN--QIEALLNTENLNEAISVLSQI 332
>UNIPROTKB|E1BX81 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005083 "small GTPase regulator activity" evidence=IEA]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 EMBL:AADN02033558 EMBL:AADN02033559
IPI:IPI00581963 Ensembl:ENSGALT00000021328 ArrayExpress:E1BX81
Uniprot:E1BX81
Length = 871
Score = 141 (54.7 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 99/462 (21%), Positives = 171/462 (37%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 437 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 491
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL + ++ +S L G E +
Sbjct: 492 ILYEKKGLHEKALQVLVDQSKKANSPL------------------KGHERTVQYLQHLGA 533
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
E+ L+ + W+ +K+ T + + L DKV++ + + YL+
Sbjct: 534 ENLH--LVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLAIPYLEH 591
Query: 711 LIEDQDSDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + FH LY L K + +F + G + G+ Y K
Sbjct: 592 IIHVWEETGAHFHNCLIQLYCEKVQGLMKEYLNSFPADKSPVPAGEEGGDL--GDYRKKL 649
Query: 764 IFQCPVQERLQIFLQSSDLYD-PEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK- 821
+ E+ + S + D P D L+E L L + + ++ L + + LK
Sbjct: 650 LL---FLEKSSCYEPSRLISDFPFD--GLLEERALLLGRMGKH----EQALFIYVHILKD 700
Query: 822 --LEDSEAAEQYCA-EIGRPDAYMQLLDMYLD----------SQDGKEPM--FKAAVRLL 866
+ ++ + Y + G D Y+ LL MYL + EP +AA+++L
Sbjct: 701 TNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVL 760
Query: 867 HNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLA 926
H LD + + L + + + Q++ NL A + +
Sbjct: 761 ELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEE 820
Query: 927 RLEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
R+ + I +E +C C ++G FA YP+ +V Y C
Sbjct: 821 RILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFC 862
Score = 99 (39.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 67/296 (22%), Positives = 126/296 (42%)
Query: 178 KANGVKVKE-EEQHC-RGDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHSDNGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ ++ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPVA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 220 EEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V ++ +P+ QI+ LL+ K F+ A+ LAE + ++
Sbjct: 277 TS----GGTNIIYVASNHFV--WRLIPT--QIQQLLQDKQFELALQLAEMKDDSDSEKRQ 328
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 329 QIHHIKNLFAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 383
Score = 46 (21.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 20/101 (19%), Positives = 43/101 (42%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIKKDIGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIAKRIRTSDS 144
L+ + +++ D L Q + + KG S+ ++ SD+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHSDN 118
>UNIPROTKB|E9PT04 [details] [associations]
symbol:Vps39 "Protein Vps39" species:10116 "Rattus
norvegicus" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 RGD:1304858 GO:GO:0006886 GO:GO:0016192
GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 GeneTree:ENSGT00530000063596
CTD:23339 IPI:IPI00357904 RefSeq:NP_001012186.2 UniGene:Rn.1508
Ensembl:ENSRNOT00000011155 GeneID:362199 KEGG:rno:362199
NextBio:678996 ArrayExpress:E9PT04 Uniprot:E9PT04
Length = 875
Score = 111 (44.1 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 57/237 (24%), Positives = 95/237 (40%)
Query: 658 LILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQWLIEDQD 716
LI + W+ +K+ T + + L D+V+ + + YL+ +I +
Sbjct: 542 LIFSYSIWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIENFKALAIPYLEHIIHVWE 601
Query: 717 SDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNSIFQCPV 769
T+FH LY +L K + + G + GE S
Sbjct: 602 ETGTRFHNCLIQLYCEKVQNLMKDYLLSLPTGKSPVPAGEEAGELGES------------ 649
Query: 770 QERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALKLEDSEAAE 829
+++L FL+ S YDP ++ L E+A+L ++G+ L I L+D++ A+
Sbjct: 650 RQKLLTFLEISSSYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTKMAK 709
Query: 830 QYCAEI------GRPDAYMQLLDMYLDSQDGKEPMFKAAVRLLHNHGESLDPLQVLE 880
+YC + G D Y+ LL MYL S + + LL LQVLE
Sbjct: 710 EYCHKHYDQNKEGNKDVYLSLLRMYL-SPPSIHCLGPIKLELLEPQANLQAALQVLE 765
Score = 104 (41.7 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 69/296 (23%), Positives = 122/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHTETGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V + + P P++ L+ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDAKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y+V + +E+ + + VQ++ + I
Sbjct: 220 EEGICTQKCALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE + ++
Sbjct: 277 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQ 332
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 333 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 387
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 35/145 (24%), Positives = 57/145 (39%)
Query: 836 GRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLHNHGESLDPLQVLETLS 883
G D Y+ LL MYL G EP +AA+++L H LD + + L
Sbjct: 722 GNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYSKLDTTKAINLLP 781
Query: 884 PDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLARLEERSRHVQINDESLC 943
+ + + Q++ NL A + + R+ + I +E +C
Sbjct: 782 ANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVC 841
Query: 944 DSCHARLGTKLFAMYPDDTIVCYKC 968
C ++G FA YP+ +V Y C
Sbjct: 842 MVCKKKIGNSAFARYPNGVVVHYFC 866
Score = 75 (31.5 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 545 VDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLAFLYASKGMSSKAL 604
+DT L+ Y N L N C +EE E +L ++ L LY KG+ KAL
Sbjct: 449 IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKAL 508
Query: 605 AI 606
+
Sbjct: 509 QV 510
Score = 40 (19.1 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 786 EDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-------LEDSEAAEQYCAEIGRP 838
E+ +++ + + E ILY K G LQ+L + L+ E QY +G
Sbjct: 479 EESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTE 538
Query: 839 DAYM 842
+ ++
Sbjct: 539 NLHL 542
Score = 39 (18.8 bits), Expect = 1.9e-10, Sum P(4) = 1.9e-10
Identities = 18/91 (19%), Positives = 38/91 (41%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIRKDVGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
L+ + +++ D L Q + + KG S+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASL 108
>UNIPROTKB|Q96JC1 [details] [associations]
symbol:VPS39 "Vam6/Vps39-like protein" species:9606 "Homo
sapiens" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0030897 "HOPS complex"
evidence=IDA] InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219
GO:GO:0031902 GO:GO:0005765 GO:GO:0015031 GO:GO:0030897
GO:GO:0005083 EMBL:CH471125 EMBL:AC036103 InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434
EMBL:AF280814 EMBL:AF334400 EMBL:AF281052 EMBL:AB018313
EMBL:BX537404 EMBL:BC015817 EMBL:BC068559 IPI:IPI00328236
IPI:IPI00332744 RefSeq:NP_056104.2 UniGene:Hs.88025
ProteinModelPortal:Q96JC1 IntAct:Q96JC1 STRING:Q96JC1
PhosphoSite:Q96JC1 DMDM:66774218 PaxDb:Q96JC1 PRIDE:Q96JC1
DNASU:23339 Ensembl:ENST00000318006 Ensembl:ENST00000348544
GeneID:23339 KEGG:hsa:23339 UCSC:uc001zpc.3 UCSC:uc001zpd.3
CTD:23339 GeneCards:GC15M042450 H-InvDB:HIX0038106 HGNC:HGNC:20593
MIM:612188 neXtProt:NX_Q96JC1 PharmGKB:PA134945163
HOGENOM:HOG000046531 HOVERGEN:HBG056493 InParanoid:Q96JC1
OMA:CLGPIKM PhylomeDB:Q96JC1 ChiTaRS:VPS39 GenomeRNAi:23339
NextBio:45293 Bgee:Q96JC1 CleanEx:HS_VPS39 Genevestigator:Q96JC1
GermOnline:ENSG00000166887 Uniprot:Q96JC1
Length = 886
Score = 123 (48.4 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 101/461 (21%), Positives = 166/461 (36%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 452 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 506
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL +VL N L G + + TE
Sbjct: 507 ILYEKKGLHEKAL---QVLVDQSKKA--------NSPLKGHERTVQYLQHLGTE------ 549
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
+ LI + W+ +K+ T + + L D+V+ + + YL+
Sbjct: 550 ---NLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEH 606
Query: 711 LIEDQDSDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + ++FH LY L K + +F G + GE Y +
Sbjct: 607 IIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGE--YRQKL 664
Query: 764 IFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-- 821
+ + D P D L+E L L + + ++ L + + LK
Sbjct: 665 LMFLEISSYYDPGRLICDF--PFD--GLLEERALLLGRMGKH----EQALFIYVHILKDT 716
Query: 822 -LEDSEAAEQYCA-EIGRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLH 867
+ + + Y + G D Y+ LL MYL G EP +AA+++L
Sbjct: 717 RMAEEYCHKHYDRNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLE 776
Query: 868 NHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLAR 927
H LD + L L + + + Q++ NL A + + R
Sbjct: 777 LHHSKLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEER 836
Query: 928 LEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
+ + I +E +C C ++G FA YP+ +V Y C
Sbjct: 837 ILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFC 877
Score = 108 (43.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 69/296 (23%), Positives = 123/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 113 KAKGASLFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 172
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ L+ + KV + D++ V ++
Sbjct: 173 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 230
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 231 EEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 287
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE + ++
Sbjct: 288 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQ 343
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 344 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 398
Score = 53 (23.7 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 19/93 (20%), Positives = 42/93 (45%)
Query: 44 IYIGTQSGSLILLSL--DPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVG 101
+ +GT+ G L+L + D A + + ++ V+ K+ ++ I V+
Sbjct: 28 LLVGTKQGHLLLYRIRKDVVPADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQF- 86
Query: 102 KVLLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
K+L+ + +++ D L Q + + KG S+
Sbjct: 87 KILVSLLENNIYVHDLLTFQQITTVSKAKGASL 119
>UNIPROTKB|F1NID0 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0030897 "HOPS complex" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 OMA:CLGPIKM EMBL:AADN02033558
EMBL:AADN02033559 IPI:IPI00595572 Ensembl:ENSGALT00000014624
ArrayExpress:F1NID0 Uniprot:F1NID0
Length = 876
Score = 141 (54.7 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 99/462 (21%), Positives = 171/462 (37%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 442 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 496
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL + ++ +S L G E +
Sbjct: 497 ILYEKKGLHEKALQVLVDQSKKANSPL------------------KGHERTVQYLQHLGA 538
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
E+ L+ + W+ +K+ T + + L DKV++ + + YL+
Sbjct: 539 ENLH--LVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLAIPYLEH 596
Query: 711 LIEDQDSDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + FH LY L K + +F + G + G+ Y K
Sbjct: 597 IIHVWEETGAHFHNCLIQLYCEKVQGLMKEYLNSFPADKSPVPAGEEGGDL--GDYRKKL 654
Query: 764 IFQCPVQERLQIFLQSSDLYD-PEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK- 821
+ E+ + S + D P D L+E L L + + ++ L + + LK
Sbjct: 655 LL---FLEKSSCYEPSRLISDFPFD--GLLEERALLLGRMGKH----EQALFIYVHILKD 705
Query: 822 --LEDSEAAEQYCA-EIGRPDAYMQLLDMYLD----------SQDGKEPM--FKAAVRLL 866
+ ++ + Y + G D Y+ LL MYL + EP +AA+++L
Sbjct: 706 TNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVL 765
Query: 867 HNHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLA 926
H LD + + L + + + Q++ NL A + +
Sbjct: 766 ELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEE 825
Query: 927 RLEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
R+ + I +E +C C ++G FA YP+ +V Y C
Sbjct: 826 RILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFC 867
Score = 93 (37.8 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 67/299 (22%), Positives = 125/299 (41%)
Query: 178 KANGVKVKE-EEQHC-RGDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH G+ V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHSDNGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ ++ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPVA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 220 EEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEE---QIKDLLRKKDFKEAISLAEELECEGEM 407
+ G ++ VA+ V ++ +P QI+ LL+ K F+ A+ LAE +
Sbjct: 277 TS----GGTNIIYVASNHFV--WRLIPVSTIATQIQQLLQDKQFELALQLAEMKDDSDSE 330
Query: 408 AKEMLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
++ + + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 331 KRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 388
Score = 46 (21.3 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 20/101 (19%), Positives = 43/101 (42%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIKKDIGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISVIAKRIRTSDS 144
L+ + +++ D L Q + + KG S+ ++ SD+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHSDN 118
>UNIPROTKB|F1SFK5 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030897 "HOPS complex" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 OMA:CLGPIKM EMBL:CU041383
Ensembl:ENSSSCT00000005227 Uniprot:F1SFK5
Length = 875
Score = 126 (49.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 100/461 (21%), Positives = 167/461 (36%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 441 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 495
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL +VL N L G + + TE
Sbjct: 496 ILYEKKGLHEKAL---QVLVDQSKKA--------NSPLKGHERTVQYLQHLGTE------ 538
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
+ LI + W+ +K+ T + + L D+V+ + + YL+
Sbjct: 539 ---NLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKSLAIPYLEH 595
Query: 711 LIEDQDSDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + ++FH LY L K + +F + G + GE Y +
Sbjct: 596 VIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEEGELGE--YRRKL 653
Query: 764 IFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-- 821
+ + D P D L+E L L + + ++ L + + LK
Sbjct: 654 LLFLEISGYYDPARLICDF--PFD--GLLEERALLLGRMGKH----EQALFIYVHILKDT 705
Query: 822 -LEDSEAAEQYCA-EIGRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLH 867
+ + + Y + G D Y+ LL MYL G EP +AA+++L
Sbjct: 706 RMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLE 765
Query: 868 NHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLAR 927
H LD + + L + + + Q++ NL A + + R
Sbjct: 766 LHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEER 825
Query: 928 LEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
+ + I +E +C C ++G FA YP+ +V Y C
Sbjct: 826 ILHQQVKCIITEEKVCMVCKKKIGNSAFAKYPNGVVVHYFC 866
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 70/296 (23%), Positives = 123/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH GD V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHTETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ + P P++ L+ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDGKGSIKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 220 EEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE + ++
Sbjct: 277 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQ 332
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 333 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 387
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 18/91 (19%), Positives = 38/91 (41%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIRKDVGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
L+ + +++ D L Q + + KG S+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASL 108
>UNIPROTKB|E1BM41 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030897 "HOPS complex" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 CTD:23339 OMA:CLGPIKM
EMBL:DAAA02028571 EMBL:DAAA02028570 IPI:IPI00708365
RefSeq:NP_001193173.1 UniGene:Bt.26861 Ensembl:ENSBTAT00000006949
GeneID:520990 KEGG:bta:520990 NextBio:20873215 Uniprot:E1BM41
Length = 875
Score = 125 (49.1 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 100/461 (21%), Positives = 166/461 (36%)
Query: 532 SRKKELTILVKEGVDTLLMYLYRALNRVHDMENLAPSENSCIVEELETLLDESGHLRTLA 591
S+KK L I +DT L+ Y N L N C +EE E +L ++ L
Sbjct: 441 SKKKLLQI-----IDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELI 495
Query: 592 FLYASKGMSSKALAIWRVLARNYSSGLWKDPAVENDLLDGCADVMSGREVAATEASKILE 651
LY KG+ KAL +VL N L G + + TE
Sbjct: 496 ILYEKKGLHEKAL---QVLVDQSKKA--------NSPLKGHERTVQYLQHLGTE------ 538
Query: 652 ESSDEDLILQHLGWIADINAVLAVKVLTSE-KRINQLSPDKVIAAIDSKKVEILQRYLQW 710
+ LI + W+ +K+ T + + L D+V+ + + YL+
Sbjct: 539 ---NLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEH 595
Query: 711 LIEDQDSDDTQFHT----LYA---LSLAKSAIEAFEEESGSKAFGTQMGETRSSGYGKNS 763
+I + ++FH LY L K + +F G + GE Y +
Sbjct: 596 VIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKAPVPAGEEEGELGE--YRRKL 653
Query: 764 IFQCPVQERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILYRKLGQETLVLQILALK-- 821
+ + D P D L+E L L + + ++ L + + LK
Sbjct: 654 LMFLEISSYYDPGRLICDF--PFD--GLLEERALLLGRMGKH----EQALFIYVHVLKDT 705
Query: 822 -LEDSEAAEQYCA-EIGRPDAYMQLLDMYLDSQD----GK------EPM--FKAAVRLLH 867
+ + + Y + G D Y+ LL MYL G EP +AA+++L
Sbjct: 706 RMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLE 765
Query: 868 NHGESLDPLQVLETLSPDMPLQLASDTIXXXXXXXXXXXXQGQIVHNLSRAVDIDARLAR 927
H LD + + L + + + Q++ NL A + + R
Sbjct: 766 LHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEER 825
Query: 928 LEERSRHVQINDESLCDSCHARLGTKLFAMYPDDTIVCYKC 968
+ + I +E +C C ++G FA YP+ +V Y C
Sbjct: 826 ILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFC 866
Score = 107 (42.7 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 70/296 (23%), Positives = 122/296 (41%)
Query: 178 KANGVKVKE-EEQHCR-GDNVF--AVIIGKRLVLIELVNGSFVILK-EIQCMDGVKTMVW 232
KA G + + QH GD V V + K+L L + F L+ + D K+M W
Sbjct: 102 KAKGASLFTCDLQHAETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAW 161
Query: 233 LNDSIIVGTVNGYSLFSCVTGQSGVIFTLPD-VSCPPMLKLLSKEQKVLLLVDNVGVFVD 291
+SI VG Y L V G+ P P++ L+ + KV + D++ V ++
Sbjct: 162 CENSICVGFKRDYYLIR-VDGKGANKELFPTGKQLEPLVAPLA-DGKVAVGQDDLTVVLN 219
Query: 292 AHGQPVGG-SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAVTFGGEGGGQCI 350
G +L + P A+ Y++ + +E+ + + VQ++ + I
Sbjct: 220 EEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRP---RFI 276
Query: 351 ATDEECGAGKLLVVATPTKVICYQKVPSEEQIKDLLRKKDFKEAISLAEELECEGEMAKE 410
+ G ++ VA+ V VP QI+ LL+ K F+ A+ LAE + ++
Sbjct: 277 TS----GGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQ 332
Query: 411 MLSFVHAQIGFLLLFDLHFEEAVDHFLHSETMQPSEV---FPFIMRDPNRWSLLVP 463
+ + F L F+E++ F T P+ V +P ++ R L P
Sbjct: 333 QIHHIKNLYAFNLFCQKRFDESMQVFAKLGT-DPTHVMGLYPDLLPTDYRKQLQYP 387
Score = 39 (18.8 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/91 (19%), Positives = 38/91 (41%)
Query: 44 IYIGTQSGSLILLSLDPTAATTLHVPNTTPSQQHVSFLKTVSVADSPVESIFVLDDVGKV 103
+ +GT+ G L+L + T + + +F K + + I V+ K+
Sbjct: 28 LLVGTKQGHLLLYRIRKDVGCNRF--EVTLEKSNKNFSKKI-------QQIHVVSQF-KI 77
Query: 104 LLLFCDQCLFLTDSLLTQPLKKLGFLKGISV 134
L+ + +++ D L Q + + KG S+
Sbjct: 78 LVSLLENNIYVHDLLTFQQITTVSKAKGASL 108
>DICTYBASE|DDB_G0291510 [details] [associations]
symbol:DDB_G0291510 "putative RapGAP" species:44689
"Dictyostelium discoideum" [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=IEA] [GO:0043547 "positive
regulation of GTPase activity" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005083 "small GTPase
regulator activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000331 InterPro:IPR001180 Pfam:PF00780 Pfam:PF02145
PROSITE:PS50085 PROSITE:PS50219 dictyBase:DDB_G0291510
EMBL:AAFI02000177 GO:GO:0005096 GO:GO:0043547 GO:GO:0051056
GO:GO:0005622 GO:GO:0005083 HSSP:P47736 eggNOG:NOG240885
RefSeq:XP_635267.1 EnsemblProtists:DDB0233060 GeneID:8628211
KEGG:ddi:DDB_G0291510 InParanoid:Q54EH3 OMA:VENPEEC Uniprot:Q54EH3
Length = 1031
Score = 139 (54.0 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 54/221 (24%), Positives = 100/221 (45%)
Query: 133 SVIAKRIRTSDSESTNLLENNSVSSLANASTSTGQRLLQKFGS-GIKAN---GVKVKEEE 188
SV +++ N+ NN+ ++ ++ + +L G IK G K
Sbjct: 649 SVFLSVNNNNNNSGNNIFNNNNNNNNNGGLNNSSENILTVIGEDSIKVKKIVGTKGCTVY 708
Query: 189 QHCRGDN------VFAVIIG--KRLVLIELVNGSFVILKEIQCMDGVKTMVWLNDSII-V 239
+ +GDN + + +G K L+L E G FV +E+ MD +KT+ + +I V
Sbjct: 709 GYTKGDNEGQEEDITLLYVGLKKTLLLYEWNKGEFVKSRELPLMDNIKTLCAIAPGMICV 768
Query: 240 GTVNGYSLFSCVTGQSGVIFTLPDVSCPPMLKLLSKEQKVLLLVDNVGVFVDAHGQPVGG 299
G + L T ++ D S P +K LS + ++LL +N+G+FVD G
Sbjct: 769 GIQKEFLLIDIFTQTIKELYKKSD-SEP--VKALSLDNEILLCFNNIGIFVDESGNKTRQ 825
Query: 300 -SLVFRKSPDAVGELSMYVVVLRGGKMELYHKKSGICVQAV 339
L + +P ++ + YV+ + G +E+ +G +Q++
Sbjct: 826 FELKWGSTPSSLALVPSYVLGISGPLIEVRTLLNGNIIQSL 866
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 997 959 0.00095 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 626 (67 KB)
Total size of DFA: 426 KB (2204 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.40u 0.10s 82.50t Elapsed: 00:00:04
Total cpu time: 82.42u 0.10s 82.52t Elapsed: 00:00:04
Start: Fri May 10 08:26:32 2013 End: Fri May 10 08:26:36 2013