Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>043574
MVNKAWKIIPRPLLETVLNNHAQHHRVPQPLIIHGPRGVGKTTLFLERLLKDLNKEPHLT
GYVDFAESIKDHHPQHNQSFPWSSWSNCEPPTLSNCKAQLETCLESMAERGIKLGTISSQ
QIFTTLNKWHGLNTALRRILSKSNKKVKNAVSDKVSGSILWERAVYALSARVNAKEIDGV
LELRENGKRLSLEEETYLREGLVGLKLAKEVLNMQHEWRANAIANLNRTGGFSRSLANSC
TDWPCLLIDLLSQAAEIDRFQPKLVINNIEVLRNAIQRMIQLYYSYRAYLDFGFIDIFIS
RETFGWTPQEAKMHMVTDYFSNSEWTVIAEVLGPNPRHLFELYALKQSNYYQKVMEDRAS
TFEDIVDAYLAYLQITVVNPAMDKALLLLQKFAFDAKNGRVLEDKLRFGTPWRHPPRTDD
TILLAEWAKIQLMDFVQALVRTEFGVNYLADCSLEIFDDPAAVALLEVGLLYAQRDPSFM
RPISRGIQRCLVRWLVLEQMKLSFWNYLQFHWQRFFRGRSYRHLMLQDRT

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043574
        (530 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2061280 - symbol:emb1381 "AT2G31340" species:3...  1003  2.2e-200  2


>TAIR|locus:2061280 [details] [associations]
            symbol:emb1381 "AT2G31340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=NAS] EMBL:CP002685
            IPI:IPI00533084 RefSeq:NP_180692.3 UniGene:At.38228
            UniGene:At.67349 PRIDE:F4IQS9 EnsemblPlants:AT2G31340.1
            GeneID:817692 KEGG:ath:AT2G31340 OMA:IFISRET Uniprot:F4IQS9
        Length = 559

 Score = 1003 (358.1 bits), Expect = 2.2e-200, Sum P(2) = 2.2e-200
 Identities = 190/277 (68%), Positives = 220/277 (79%)

Query:     1 MVNKAWKIIPRPLLETVLNNHAQHHRVPQPLIIHGPRGVGKTTLFLERLLKDLNKEPHLT 60
             MVNK WKIIP+PLLETVLNNH Q HRVPQPLI+HGPRGVGKTTL L RLL D NK PHL 
Sbjct:     1 MVNKHWKIIPKPLLETVLNNHVQRHRVPQPLILHGPRGVGKTTLILNRLLGDWNKGPHLA 60

Query:    61 GYVDFAESIKDHHPQHNQSFPWSSWSNCEPPTLSNCKAQLETCLESMAERGIKLGTISSQ 120
             GYVDFA+SI +HHP H+QS+PW+SW++ +PP LSNCK QLE CLESM+ + IKLG+ISSQ
Sbjct:    61 GYVDFAQSITEHHPDHHQSYPWTSWTSVDPPLLSNCKTQLENCLESMSHKAIKLGSISSQ 120

Query:   121 QIFTTLNKWHGLNTALRRILXXXXXXXXXXXXXXXXGSILWERAVYALSARVNAKEIDGV 180
             QIFTT+NKW+GLNTALRRIL                 S LWERAVYALS R NA EIDG+
Sbjct:   121 QIFTTMNKWYGLNTALRRILQGYNIAVPEKVSV----SFLWERAVYALSVRQNADEIDGL 176

Query:   181 LELRENGKRLSLEEETYLREGLVGLKLAKEVLNMQHEWRANAIANLNRTGGFSRSLANSC 240
             LEL E G  LS+EE +Y RE    L+LAKEV+ +   W+ANAIA+LNRT GFSR+LANSC
Sbjct:   177 LELEEKGNSLSVEEASYYRETAFALRLAKEVIKVHQGWKANAIAHLNRTNGFSRTLANSC 236

Query:   241 TDWPCLLIDLLSQAAEIDRFQPKLVINNIEVLRNAIQ 277
             TDWP L+++LLSQAAEI  FQPKLV+NNIE+L+ AIQ
Sbjct:   237 TDWPLLMLELLSQAAEIGFFQPKLVLNNIEILKRAIQ 273

 Score = 959 (342.6 bits), Expect = 2.2e-200, Sum P(2) = 2.2e-200
 Identities = 174/248 (70%), Positives = 209/248 (84%)

Query:   283 YYSYRAYLDFGFIDIFISRETFGWTPQEAKMHMVTDYFSNSEWTVIAEVLGPNPRHLFEL 342
             YYSY+A++D+GF DIFISRETFGW PQEAK+HMV DYFS SEWT+IA+VLG N RHLFEL
Sbjct:   312 YYSYQAFVDYGFPDIFISRETFGWNPQEAKLHMVPDYFSASEWTIIADVLGANSRHLFEL 371

Query:   343 YALKQSNYYQKVMEDRASTFEDIVDAYLAYLQITVVNPAMDKALLLLQKFAFDAKNGRVL 402
             YALKQSN+YQ +M  +A TFEDIVDAYLAYLQ+ VVNPAMDKALL LQ++A D + G + 
Sbjct:   372 YALKQSNHYQSLMGSKAGTFEDIVDAYLAYLQVAVVNPAMDKALLRLQRYATDVRKGSIP 431

Query:   403 EDKLRFGTPWRHPPRTDDTILLAEWAKIQLMDFVQALVRTEFGVNYLADCSLEIFDDPAA 462
              +KLRFG  WRHPP+T+D    +EWAKIQLMDFVQALV TEF VNYL D SLEIF+DP+A
Sbjct:   432 YEKLRFGASWRHPPQTEDPTQNSEWAKIQLMDFVQALVNTEFAVNYLGDYSLEIFEDPSA 491

Query:   463 VALLEVGLLYAQRDPSFMRPISRGIQRCLVRWLVLEQMKLSFWNYLQFHWQRFFRGRSYR 522
             +AL+EVG+LY QRDPSF RPIS+GI+RCLVRWL+ E+M++S+W+  ++ WQR  RGR Y+
Sbjct:   492 MALVEVGILYTQRDPSFFRPISQGIKRCLVRWLIQERMQMSYWSSTKYWWQRIIRGRYYK 551

Query:   523 HLMLQDRT 530
             HLML  RT
Sbjct:   552 HLMLGYRT 559


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      530       514   0.00088  119 3  11 22  0.48    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  338 KB (2168 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.83u 0.09s 43.92t   Elapsed:  00:00:02
  Total cpu time:  43.83u 0.09s 43.92t   Elapsed:  00:00:02
  Start:  Fri May 10 08:29:42 2013   End:  Fri May 10 08:29:44 2013

Back to top