Query 043577
Match_columns 402
No_of_seqs 257 out of 1522
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 10:38:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043577.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043577hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w98b2 a.74.1.1 (B:88-227) G1 99.9 1.2E-27 8.5E-32 207.9 10.1 116 164-296 2-118 (140)
2 d1g3nc1 a.74.1.1 (C:16-147) Vi 99.9 2.1E-27 1.5E-31 204.6 9.2 109 172-296 2-110 (132)
3 d2cchb1 a.74.1.1 (B:181-308) C 99.9 9.7E-27 7E-31 199.0 8.2 105 175-296 1-105 (128)
4 d1bu2a1 a.74.1.1 (A:22-148) Vi 99.9 6E-26 4.4E-30 194.2 8.4 104 176-296 2-105 (127)
5 d1f5qb1 a.74.1.1 (B:6-146) Vir 99.9 8.3E-24 6.1E-28 183.8 2.0 113 163-296 4-118 (141)
6 d2cchb2 a.74.1.1 (B:309-432) C 99.8 1.8E-20 1.3E-24 159.3 10.2 104 297-402 5-109 (124)
7 d2i53a1 a.74.1.1 (A:14-157) Cy 99.4 3E-14 2.2E-18 122.6 4.3 73 206-292 34-106 (144)
8 d1jkwa1 a.74.1.1 (A:11-161) Cy 99.3 6.1E-13 4.4E-17 115.3 7.7 103 171-293 14-119 (151)
9 d2ivxa1 a.74.1.1 (A:7-149) Cyc 99.3 4.1E-13 3E-17 115.0 4.3 71 206-290 28-98 (143)
10 d2i53a2 a.74.1.1 (A:158-267) C 97.6 0.00011 8.1E-09 59.1 9.5 74 312-387 23-105 (110)
11 d1w98b1 a.74.1.1 (B:228-357) G 97.6 5.9E-05 4.3E-09 62.4 6.9 57 318-383 37-93 (130)
12 d2ivxa2 a.74.1.1 (A:150-262) C 97.6 0.00027 1.9E-08 57.3 10.6 76 310-387 17-99 (113)
13 d1jkwa2 a.74.1.1 (A:162-287) C 96.6 0.0036 2.6E-07 51.2 8.5 89 310-398 23-116 (126)
14 d1aisb2 a.74.1.2 (B:1206-1300) 96.4 0.013 9.2E-07 45.1 10.3 85 297-384 5-89 (95)
15 d1vola2 a.74.1.2 (A:208-316) T 95.3 0.036 2.6E-06 43.5 8.6 85 297-384 6-90 (109)
16 d1aisb1 a.74.1.2 (B:1108-1205) 94.6 0.1 7.5E-06 39.8 9.3 72 311-384 20-91 (98)
17 d1aisb2 a.74.1.2 (B:1206-1300) 94.0 0.021 1.5E-06 43.8 4.0 67 214-294 5-71 (95)
18 d1vola1 a.74.1.2 (A:113-207) T 94.0 0.14 1E-05 38.8 8.8 71 311-383 20-90 (95)
19 d1aisb1 a.74.1.2 (B:1108-1205) 94.0 0.028 2E-06 43.2 4.7 67 214-294 7-73 (98)
20 d1vola1 a.74.1.2 (A:113-207) T 93.8 0.034 2.4E-06 42.5 4.9 67 214-294 7-73 (95)
21 d1vola2 a.74.1.2 (A:208-316) T 93.2 0.035 2.5E-06 43.6 4.0 68 213-294 5-72 (109)
22 d2ivxa2 a.74.1.1 (A:150-262) C 75.9 1.7 0.00013 33.9 5.1 49 215-263 6-55 (113)
23 d2i53a2 a.74.1.1 (A:158-267) C 72.7 0.87 6.3E-05 35.2 2.5 35 228-262 23-57 (110)
24 d2i53a1 a.74.1.1 (A:14-157) Cy 66.3 7.4 0.00054 30.6 7.1 53 297-350 42-94 (144)
25 d1bu2a1 a.74.1.1 (A:22-148) Vi 66.3 25 0.0018 27.0 11.1 84 297-382 36-121 (127)
26 d2ivxa1 a.74.1.1 (A:7-149) Cyc 63.6 9.7 0.00071 29.7 7.3 53 297-350 36-88 (143)
27 d2cchb1 a.74.1.1 (B:181-308) C 60.2 23 0.0017 27.0 9.0 85 297-383 36-122 (128)
28 d1f5qb1 a.74.1.1 (B:6-146) Vir 55.9 21 0.0015 28.0 8.1 71 312-383 63-135 (141)
29 d1jkwa1 a.74.1.1 (A:11-161) Cy 46.1 61 0.0044 25.1 11.1 40 311-350 67-106 (151)
30 d1w98b2 a.74.1.1 (B:88-227) G1 37.4 81 0.0059 24.0 10.3 85 297-383 48-135 (140)
31 d1g3nc1 a.74.1.1 (C:16-147) Vi 35.4 86 0.0062 23.7 10.6 84 297-382 41-126 (132)
32 d1f5qb2 a.74.1.1 (B:147-252) V 34.5 11 0.00083 27.3 2.6 69 313-384 24-95 (106)
No 1
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.2e-27 Score=207.94 Aligned_cols=116 Identities=34% Similarity=0.671 Sum_probs=109.6
Q ss_pred CCchhhhhhHHHHHHHHHHhhhhhhcCCCCcchhhhcCCCCChhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhcc
Q 043577 164 KDPQFCATIACDIYKNLRASEDFQAKKRPSLDFMDRVQKDINPGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSG 243 (402)
Q Consensus 164 ~dp~~~~eY~~eI~~~L~~~E~~~~~~~p~~~yl~~~q~~it~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~ 243 (402)
.+|+++..|++|||++|+++| .++.+.++|+.+ |++++++||.++||||++|+..|+++++|+|+||+||||||+.
T Consensus 2 ~~p~~~~~~~~dI~~~l~~~E---~~~~~~~~~l~~-q~~i~~~~R~~lidW~~~v~~~~~l~~et~~lAv~llDryl~~ 77 (140)
T d1w98b2 2 PLPVLSWANREEVWKIMLNKE---KTYLRDQHFLEQ-HPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMAT 77 (140)
T ss_dssp CSCCCSSSCHHHHHHHHHHHT---TTSCCCTTGGGG-CTTCCHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCccccccCHHHHHHHHHHHH---HhhCCChHHHhC-CCCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhc
Confidence 368899999999999999999 899999999986 9999999999999999999999999999999999999999985
Q ss_pred -ccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhccch
Q 043577 244 -NVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYITDNT 296 (402)
Q Consensus 244 -~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~itd~~ 296 (402)
..+.++++||+|+|||||| +|+||..+|.+.+|++++++.
T Consensus 78 ~~~v~~~~lqL~a~acL~IA-------------sK~ee~~~~~~~~l~~~~~~~ 118 (140)
T d1w98b2 78 QENVVKTLLQLIGISSLFIA-------------AKLEEIYPPKLHQFAYVTDGA 118 (140)
T ss_dssp CCCCCGGGHHHHHHHHHHHH-------------HHHHCSSCCCHHHHHHTTTTS
T ss_pred cccccHHHHhHHHHHHHHHH-------------HHHcccCCCCHHHHHHHHcCC
Confidence 4589999999999999999 999999999999999998776
No 2
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=99.94 E-value=2.1e-27 Score=204.55 Aligned_cols=109 Identities=28% Similarity=0.513 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHhhhhhhcCCCCcchhhhcCCCCChhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhcccccccccc
Q 043577 172 IACDIYKNLRASEDFQAKKRPSLDFMDRVQKDINPGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQL 251 (402)
Q Consensus 172 Y~~eI~~~L~~~E~~~~~~~p~~~yl~~~q~~it~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~L 251 (402)
+.++||++|++.| .++.|+++|+..+|+++++.||..+||||.+|+..|+++++|+|+||+||||||++..++++++
T Consensus 2 ~~~~i~~~l~~~E---~~~~p~~~y~~~~q~~it~~~R~~lidWl~~v~~~~~l~~et~~lAv~llDrfls~~~v~~~~l 78 (132)
T d1g3nc1 2 CEDRIFYNILEIE---PRFLTSDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSKEHF 78 (132)
T ss_dssp HHHHHHHHHHHHG---GGGCCCGGGHHHHTSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTCCCCHHHH
T ss_pred chHHHHHHHHHHH---HHHCCChHHHHhcCccCCHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCcccCcHHHH
Confidence 4579999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHhhcccccccccccccccccccCCccccchhhhccch
Q 043577 252 QLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYITDNT 296 (402)
Q Consensus 252 QLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~itd~~ 296 (402)
||+|+|||||| +|+||..+|.++++++++++.
T Consensus 79 qLia~tcl~iA-------------sK~ee~~~~~~~~l~~~~~~~ 110 (132)
T d1g3nc1 79 QKTGSACLLVA-------------SKLRSLTPISTSSLCYAAADS 110 (132)
T ss_dssp HHHHHHHHHHH-------------HHHHCSSCCCHHHHHHHTTTC
T ss_pred HHHHHHHHHHH-------------HHhcccCCCCHHHHHHHHcCC
Confidence 99999999999 999999999999999998876
No 3
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=9.7e-27 Score=198.96 Aligned_cols=105 Identities=57% Similarity=0.939 Sum_probs=101.4
Q ss_pred HHHHHHHHhhhhhhcCCCCcchhhhcCCCCChhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchh
Q 043577 175 DIYKNLRASEDFQAKKRPSLDFMDRVQKDINPGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLL 254 (402)
Q Consensus 175 eI~~~L~~~E~~~~~~~p~~~yl~~~q~~it~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLv 254 (402)
|||.+|+++| .++.|+++|+.+ |+++++.+|..+||||++|+..++++++|+|+||+|||||++...+.++++||+
T Consensus 1 dI~~~l~~~E---~~~~p~~~~l~~-q~~i~~~~R~~li~W~~~v~~~~~l~~~t~~lAv~llDr~l~~~~i~~~~~qLi 76 (128)
T d2cchb1 1 DIHTYLREME---VKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLV 76 (128)
T ss_dssp HHHHHHHHHH---HHTCCCTTGGGG-CSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred CHHHHHHHHH---hhhCCCchhhhC-CCCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 7999999999 999999999986 999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcccccccccccccccccccCCccccchhhhccch
Q 043577 255 GVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYITDNT 296 (402)
Q Consensus 255 gitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~itd~~ 296 (402)
|+|||||| +|+||..+|.+++++.++++.
T Consensus 77 ~~~cl~iA-------------sK~ee~~~~~l~~l~~~~~~~ 105 (128)
T d2cchb1 77 GTAAMLLA-------------SKFEEIYPPEVAEFVYITDDT 105 (128)
T ss_dssp HHHHHHHH-------------HHHHCSSCCCHHHHHHHTTSS
T ss_pred HHHHHHHH-------------HHHHhccCCCHHHHHHHHcCC
Confidence 99999999 999999999999999988765
No 4
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=99.92 E-value=6e-26 Score=194.17 Aligned_cols=104 Identities=28% Similarity=0.508 Sum_probs=98.2
Q ss_pred HHHHHHHhhhhhhcCCCCcchhhhcCCCCChhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhh
Q 043577 176 IYKNLRASEDFQAKKRPSLDFMDRVQKDINPGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLG 255 (402)
Q Consensus 176 I~~~L~~~E~~~~~~~p~~~yl~~~q~~it~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvg 255 (402)
|+++|+.+| ...|...++..+|++|++.+|.++||||++|+.+|+++++|+|+||+||||||+...+.++++||+|
T Consensus 2 ~~~~l~~~e----~~~p~~~~~~~~q~~it~~~R~~lidWl~~v~~~~~l~~eTl~lAv~llDryl~~~~i~~~~lqLi~ 77 (127)
T d1bu2a1 2 VLNNLKLRE----LLLPKFTSLWEIQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTLQKIG 77 (127)
T ss_dssp CHHHHHHTT----TSSCCCSSTTTTCSSSCHHHHHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHTTTSCCCTTTHHHHH
T ss_pred hHHHHHHHH----HhCCCchHHhhcCCcCCHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHcccccccHHHHHHHH
Confidence 678998888 5778888887789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccccccccccccCCccccchhhhccch
Q 043577 256 VACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYITDNT 296 (402)
Q Consensus 256 itCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~itd~~ 296 (402)
+|||||| +|+||..+|.+++|++++++.
T Consensus 78 ~tcL~IA-------------sK~ee~~~~~l~~l~~~~~~~ 105 (127)
T d1bu2a1 78 AACVLIG-------------SKIRTVKPMTVSKLTYLSCDC 105 (127)
T ss_dssp HHHHHHH-------------HHHSSSSCCCHHHHHHTTTTS
T ss_pred HHHHHHH-------------HHHHhcCCCCHHHHHHHHcCC
Confidence 9999999 999999999999999999875
No 5
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=99.87 E-value=8.3e-24 Score=183.82 Aligned_cols=113 Identities=19% Similarity=0.323 Sum_probs=94.4
Q ss_pred CCCchhhhh--hHHHHHHHHHHhhhhhhcCCCCcchhhhcCCCCChhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhh
Q 043577 163 IKDPQFCAT--IACDIYKNLRASEDFQAKKRPSLDFMDRVQKDINPGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRY 240 (402)
Q Consensus 163 ~~dp~~~~e--Y~~eI~~~L~~~E~~~~~~~p~~~yl~~~q~~it~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRf 240 (402)
..||.++.+ +.+.||+..++.+ ....++. +|+++|+.+|.++||||++|+.+|+++++|+|+||+|||||
T Consensus 4 ~~d~~~~~~~~~~~~i~~~e~~~~-------~~~~~~~-~~~~it~~~R~~lvdWm~~v~~~~~l~~etl~lAv~llDrf 75 (141)
T d1f5qb1 4 FLDSSLLNEEDCRQMIYRSEREHD-------ARMVGVN-VDQHFTSQYRKVLTTWMFCVCKDLRQDNNVFPLAVALLDEL 75 (141)
T ss_dssp SCSCTTCCHHHHHHHHHHHHHHHH-------HHHSSSS-HHHHHHCSHHHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHHHHhc-------ccccccc-cCccCCHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 345555553 3444454444444 3334444 47789999999999999999999999999999999999999
Q ss_pred hccccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhccch
Q 043577 241 LSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYITDNT 296 (402)
Q Consensus 241 Ls~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~itd~~ 296 (402)
+++..++++++||+|+|||||| +|+||..+|.+.++++++++.
T Consensus 76 ls~~~i~~~~lqL~a~tcL~IA-------------sK~ee~~~~~~~~l~~~~~~~ 118 (141)
T d1f5qb1 76 FLSTRIDRENYQSTAAVALHIA-------------GKVRAYMPIKATQLAYLCGGA 118 (141)
T ss_dssp HHHSCCCGGGHHHHHHHHHHHH-------------HHHHCSSCCCHHHHHHHHCTT
T ss_pred HhhccccHHHHHHHHHHHHHHH-------------HHHHhcCcccHHHHHHHhcCC
Confidence 9999999999999999999999 999999999999999998876
No 6
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.82 E-value=1.8e-20 Score=159.27 Aligned_cols=104 Identities=31% Similarity=0.453 Sum_probs=92.5
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhccccc-ccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYK-MLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDC 375 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~-fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C 375 (402)
+||+++.......+.+++.+|+||+|++|+|++ |++|+||+||+|||++|+.++ +...|+..|.+++||+.+||.+|
T Consensus 5 ~FL~ry~~~~~~~d~~~~~la~Yl~ElsLl~~~~~l~~~PS~lAaaai~lar~~l--~~~~W~~~L~~~t~y~~~~l~~c 82 (124)
T d2cchb2 5 QFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTV--TGQSWPESLIRKTGYTLESLKPC 82 (124)
T ss_dssp HHHHHHHTTCSSCCHHHHHHHHHHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHH--HSCCSCHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHccCcHHHHHHHHHHHHHHHHhHHHHHccChHHHHHHHHHHHHHHh--CCCCchHHHHHHhCCCHHHHHHH
Confidence 688775433334567789999999999999985 999999999999999999999 45679999999999999999999
Q ss_pred HHHHHHHHhhCCCCChhHHHHhhcCCC
Q 043577 376 VKALHRLFCDGGLSNLSAIREKYSQHK 402 (402)
Q Consensus 376 ~~~L~~l~~~~~~~~~~aIr~KYs~~k 402 (402)
++.|.+++.+.+..++++||+||+++|
T Consensus 83 ~~~L~~~~~~~~~~~~~ai~~KYs~~k 109 (124)
T d2cchb2 83 LMDLHQTYLKAPQHAQQSIREKYKNSK 109 (124)
T ss_dssp HHHHHHHHHHGGGSSCCHHHHHHTSGG
T ss_pred HHHHHHHHHhCCCcchhHHHHHhCchh
Confidence 999999998888888999999999876
No 7
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=3e-14 Score=122.64 Aligned_cols=73 Identities=18% Similarity=0.307 Sum_probs=66.2
Q ss_pred hhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCcc
Q 043577 206 PGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQ 285 (402)
Q Consensus 206 ~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~ 285 (402)
..+|..+++||.+++.+++|+.+|+++|+.|||||++++.+...++|++|+|||||| +|+||. +..
T Consensus 34 ~~~R~~~~~~i~~~~~~l~l~~~t~~~A~~~~dRf~~~~~~~~~~~~lva~acl~LA-------------~K~eE~-~~~ 99 (144)
T d2i53a1 34 ARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLA-------------GKVEET-PKK 99 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHH-------------HHHTTC-CCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCcccchhHHHHHHHHHHHH-------------HHhhcc-ccc
Confidence 458999999999999999999999999999999999999999999999999999999 888886 456
Q ss_pred ccchhhh
Q 043577 286 VEELCYI 292 (402)
Q Consensus 286 l~df~~i 292 (402)
+++++.+
T Consensus 100 l~~vi~~ 106 (144)
T d2i53a1 100 CKDIIKT 106 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6776544
No 8
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=6.1e-13 Score=115.30 Aligned_cols=103 Identities=13% Similarity=0.202 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHhhhhhhcCCCCc-chhhhcCCCCChhhHHHHHHHHHHHHHhcC--cchHHHHHHHHHHhhhhcccccc
Q 043577 171 TIACDIYKNLRASEDFQAKKRPSL-DFMDRVQKDINPGMRAILIDWLVEVSEEYR--LVPETLFLAVNYIDRYLSGNVII 247 (402)
Q Consensus 171 eY~~eI~~~L~~~E~~~~~~~p~~-~yl~~~q~~it~~~R~~LVdWL~eV~~~~~--L~~eTl~LAV~~lDRfLs~~~v~ 247 (402)
+..++-|......+ ....|.. .++ +++-...+|...++||.+++.+|+ |+++|+++|++|||||+.++++.
T Consensus 14 ~~~n~~~~~~~~~~---~~~~~~~~~~l---~~~ee~~l~~~~~~~l~~~~~~~k~~l~~~~~~tA~~~~~RF~~~~s~~ 87 (151)
T d1jkwa1 14 ADANRKFRCKAVAN---GKVLPNDPVFL---EPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVM 87 (151)
T ss_dssp HHHHHHHHHHHHHT---SSSCTTCTTSC---CHHHHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHGGGSCTT
T ss_pred HHHHHHHHHHHHhh---cccCcccccCC---CHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHhhcCccc
Confidence 34555566665555 4444432 222 222223699999999999999876 88999999999999999999999
Q ss_pred ccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhc
Q 043577 248 RQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYIT 293 (402)
Q Consensus 248 ~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~it 293 (402)
+.++|++|+|||+|| +|+||. ++.+++++...
T Consensus 88 ~~~~~li~~acl~LA-------------~K~ee~-~~~~~~~~~~~ 119 (151)
T d1jkwa1 88 EYHPRIIMLTCAFLA-------------CKVDEF-NVSSPQFVGNL 119 (151)
T ss_dssp TSCHHHHHHHHHHHH-------------HHHTTC-CCCHHHHGGGS
T ss_pred cccHHHHHHHHHHHH-------------HHHccc-CCCHHHHHHHH
Confidence 999999999999999 888885 56677776544
No 9
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=4.1e-13 Score=114.95 Aligned_cols=71 Identities=14% Similarity=0.277 Sum_probs=63.3
Q ss_pred hhhHHHHHHHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCcc
Q 043577 206 PGMRAILIDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQ 285 (402)
Q Consensus 206 ~~~R~~LVdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~ 285 (402)
..+|...++||.+++..++++.+|+++|+.|||||++++++.+.++|+||+|||||| +|+||. +..
T Consensus 28 ~~~R~~~~~~i~~~~~~l~l~~~t~~~A~~l~~Rf~~~~s~~~~~~~~va~acl~LA-------------~K~eE~-~~~ 93 (143)
T d2ivxa1 28 LSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLA-------------AKVEEQ-ARK 93 (143)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHH-------------HHHTTC-CCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCccccCHHHHHHHHHHHH-------------HHhccc-ccc
Confidence 468999999999999999999999999999999999999999999999999999999 777775 334
Q ss_pred ccchh
Q 043577 286 VEELC 290 (402)
Q Consensus 286 l~df~ 290 (402)
+++++
T Consensus 94 ~~~ii 98 (143)
T d2ivxa1 94 LEHVI 98 (143)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45544
No 10
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.00011 Score=59.10 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCC---------CCCChHHHHHhhCCChhhHHHHHHHHHHH
Q 043577 312 QFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPL---------KKPWNSTLGHYTFYQPSDLCDCVKALHRL 382 (402)
Q Consensus 312 ~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~---------~~~W~~~L~~~tgy~~~~L~~C~~~L~~l 382 (402)
.+...|+.++.-++...-++.|+|.+||+|||++|.+..+-. ...|-..+ ..+.+.++|.+++..|..+
T Consensus 23 ~l~q~AW~~lNDs~rT~lcL~~~P~~IA~a~I~lA~~~~~~~ip~~~~~~~~~~W~~~f--~~dvt~e~i~~i~~~il~l 100 (110)
T d2i53a2 23 KLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQF--VQDVPVDVLEDICHQILDL 100 (110)
T ss_dssp HHHHHHHHHHHHHTTTTGGGTSCHHHHHHHHHHHHHHHHTCCGGGGBSSCCSSCGGGGT--SSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCchhccCcHHHHHHHHHHHHHHhCCCCCCcccCcccccHHHHH--HccCCHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999999999998511 23465544 3479999999999999999
Q ss_pred HhhCC
Q 043577 383 FCDGG 387 (402)
Q Consensus 383 ~~~~~ 387 (402)
|....
T Consensus 101 Y~~~k 105 (110)
T d2i53a2 101 YSQGK 105 (110)
T ss_dssp TSSSC
T ss_pred Hcccc
Confidence 97644
No 11
>d1w98b1 a.74.1.1 (B:228-357) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.58 E-value=5.9e-05 Score=62.41 Aligned_cols=57 Identities=26% Similarity=0.331 Sum_probs=48.4
Q ss_pred HHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHHHHHHHHHH
Q 043577 318 NYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDCVKALHRLF 383 (402)
Q Consensus 318 ~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C~~~L~~l~ 383 (402)
-.|++||.+|..+++|..|+|||||++.- . -.+.....+|++.++|.+|++.|.-+.
T Consensus 37 aqLLDLC~LDi~sl~fsYsvLAAaAl~h~---~------~~e~~~kvSGl~w~~l~~Cv~WM~PF~ 93 (130)
T d1w98b1 37 AELLDLCVLDVDCLEFPYGILAASALYHF---S------SSELMQKVSGYQWCDIENCVKWMVPFA 93 (130)
T ss_dssp HHHHHHHHHSGGGGGSCHHHHHHHHHHHT---S------CHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhcCchHHHHHHHHHHc---c------cHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 35889999999999999999999999952 2 124558899999999999999998744
No 12
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=0.00027 Score=57.34 Aligned_cols=76 Identities=17% Similarity=0.080 Sum_probs=60.7
Q ss_pred cHHHHHHHHHHHHHhcc-cccccCCCHHHHHHHHHHHHHHHhCC------CCCCChHHHHHhhCCChhhHHHHHHHHHHH
Q 043577 310 SMQFECLANYILELSLL-DYKMLCYSPSLIAASATFLANFILYP------LKKPWNSTLGHYTFYQPSDLCDCVKALHRL 382 (402)
Q Consensus 310 ~~~l~~la~yllElsL~-d~~fl~~~PS~IAaAai~lA~~~l~~------~~~~W~~~L~~~tgy~~~~L~~C~~~L~~l 382 (402)
...+...|+.++.-++. ..-++.|+|.+||+|||++|.++.+- ....|...+ ..+++.++|.+++..|.++
T Consensus 17 ~~~l~q~AW~~lnDs~r~T~lcL~~~P~~IA~a~I~LA~~~~~~~~p~~~~~~~Ww~~f--d~~vt~e~i~~i~~~il~l 94 (113)
T d2ivxa2 17 SKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYV--DPTVTLELLDELTHEFLQI 94 (113)
T ss_dssp CHHHHHHHHHHHHHHHHHCCGGGTSCHHHHHHHHHHHHHHHHTCCCCCCTTCCCGGGGT--CSSCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhccCCeeeecCcHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 35678899999988887 44579999999999999999999851 123576555 3468899999999999999
Q ss_pred HhhCC
Q 043577 383 FCDGG 387 (402)
Q Consensus 383 ~~~~~ 387 (402)
|....
T Consensus 95 Ye~~p 99 (113)
T d2ivxa2 95 LEKTP 99 (113)
T ss_dssp HHTSH
T ss_pred HHHCh
Confidence 97653
No 13
>d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59 E-value=0.0036 Score=51.24 Aligned_cols=89 Identities=19% Similarity=0.101 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHH--HhhCCChhhHHHHHHHHHHHHhhCC
Q 043577 310 SMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLG--HYTFYQPSDLCDCVKALHRLFCDGG 387 (402)
Q Consensus 310 ~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~--~~tgy~~~~L~~C~~~L~~l~~~~~ 387 (402)
...+...|+-+++-+++..-++.|.||+||+|||++|...++.....|..... ....-...+|.+.++.+..++.+..
T Consensus 23 ~~~l~~~a~~~lnds~~Td~~l~y~P~qIalaal~~a~~~~~~~l~~y~~~~~~~~~~~~~~~~l~~~i~~i~~l~~~~~ 102 (126)
T d1jkwa2 23 PEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE 102 (126)
T ss_dssp HHHHHHHHHHHHHHHTTSTHHHHSCHHHHHHHHHHHHHHHHSCCCTTHHHHHTTSCSSSCCTHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCeeeeeCHHHHHHHHHHHHHHHcCCCHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHccC
Confidence 34567788888888999888999999999999999999999533444543321 2223456678888888888887654
Q ss_pred C---CChhHHHHhh
Q 043577 388 L---SNLSAIREKY 398 (402)
Q Consensus 388 ~---~~~~aIr~KY 398 (402)
. .....|.+|.
T Consensus 103 ~~~~e~vk~i~kKL 116 (126)
T d1jkwa2 103 PPRSEEVAVLKQKL 116 (126)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 2 2455566664
No 14
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=96.41 E-value=0.013 Score=45.06 Aligned_cols=85 Identities=13% Similarity=0.031 Sum_probs=63.6
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDCV 376 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C~ 376 (402)
+|+.++....+.+ ..+...|.++...+.-.--..+-.|..+||||||+|.+.. +.+.-...+...+|.+...|..|.
T Consensus 5 d~I~R~~~~L~L~-~~i~~~A~~i~~~~~~~~~~~Gr~p~~vaAA~iY~a~r~~--~~~~t~~eIa~~~~vs~~tI~~~y 81 (95)
T d1aisb2 5 DYVNKFADELGLS-EKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLE--GEKRTQREVAEVARVTEVTVRNRY 81 (95)
T ss_dssp GGHHHHHHHHTCC-HHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHHHHHHT--TCCCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCcC-HHHHHHHHHHHHHHHHcCCcCCCcHHhHHHHHHHHHHHHc--CCCcCHHHHHHHHCCCHHHHHHHH
Confidence 4555554443333 3567788888866554444567899999999999999997 344456788999999999999999
Q ss_pred HHHHHHHh
Q 043577 377 KALHRLFC 384 (402)
Q Consensus 377 ~~L~~l~~ 384 (402)
+.|.+.+.
T Consensus 82 k~l~~~l~ 89 (95)
T d1aisb2 82 KELVEKLK 89 (95)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99988664
No 15
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.29 E-value=0.036 Score=43.53 Aligned_cols=85 Identities=15% Similarity=0.049 Sum_probs=61.7
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDCV 376 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C~ 376 (402)
+|+.++....+.+ ..+...|..+...+.-..-..+-.|..+||||||+|.+.. +.+.-...+...+|++..++..|.
T Consensus 6 d~i~Rf~s~L~L~-~~i~~~A~~i~~~~~~~~~~~Gr~p~~iaAa~iY~a~r~~--~~~~t~~eIa~~~~vs~~tI~k~y 82 (109)
T d1vola2 6 DFMSRFCSNLCLP-KQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQAS--AEKRTQKEIGDIAGVADVTIRQSY 82 (109)
T ss_dssp GTHHHHHHHHTCC-HHHHHHHHHHHHHHHHTTCSTTCCHHHHHHHHHHHHHHTS--SSCCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHcCcC-HHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHc--CCCCCHHHHHHHHCCCHHHHHHHH
Confidence 4555554433333 3566777777755443334567889999999999999987 344456788999999999999999
Q ss_pred HHHHHHHh
Q 043577 377 KALHRLFC 384 (402)
Q Consensus 377 ~~L~~l~~ 384 (402)
+.|.....
T Consensus 83 k~l~~~~~ 90 (109)
T d1vola2 83 RLIYPRAP 90 (109)
T ss_dssp HHHGGGHH
T ss_pred HHHHHHHH
Confidence 99876544
No 16
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=94.56 E-value=0.1 Score=39.81 Aligned_cols=72 Identities=10% Similarity=-0.013 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHHHHHHHHHHh
Q 043577 311 MQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDCVKALHRLFC 384 (402)
Q Consensus 311 ~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C~~~L~~l~~ 384 (402)
..+...|..+...+.-..-+.+-.|..+|+||||+|.+.. +.+.-...+...+|++..++..+.+.|.+.+.
T Consensus 20 ~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~Acr~~--~~~~t~~eIa~~~~is~~ti~k~yk~i~~~L~ 91 (98)
T d1aisb1 20 RHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLL--KVPRTLDEIADIARVDKKEIGRSYRFIARNLN 91 (98)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHH--TCCCCHHHHHHHTTSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHc--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 3566677777776665555678889999999999999998 45555678899999999999999999988653
No 17
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=94.02 E-value=0.021 Score=43.79 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=55.5
Q ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhc
Q 043577 214 DWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYIT 293 (402)
Q Consensus 214 dWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~it 293 (402)
||+-.+|..++|+.++.-.|..++.......-+......-++++|+++| ++.... +.++.|++.++
T Consensus 5 d~I~R~~~~L~L~~~i~~~A~~i~~~~~~~~~~~Gr~p~~vaAA~iY~a-------------~r~~~~-~~t~~eIa~~~ 70 (95)
T d1aisb2 5 DYVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIA-------------SLLEGE-KRTQREVAEVA 70 (95)
T ss_dssp GGHHHHHHHHTCCHHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHHH-------------HHHTTC-CCCHHHHHHHH
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHcCCcCCCcHHhHHHHHHHHH-------------HHHcCC-CcCHHHHHHHH
Confidence 7899999999999999999999999988877777778999999999999 776654 34556665554
Q ss_pred c
Q 043577 294 D 294 (402)
Q Consensus 294 d 294 (402)
+
T Consensus 71 ~ 71 (95)
T d1aisb2 71 R 71 (95)
T ss_dssp T
T ss_pred C
Confidence 3
No 18
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.98 E-value=0.14 Score=38.83 Aligned_cols=71 Identities=8% Similarity=0.003 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhCCChhhHHHHHHHHHHHH
Q 043577 311 MQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTFYQPSDLCDCVKALHRLF 383 (402)
Q Consensus 311 ~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tgy~~~~L~~C~~~L~~l~ 383 (402)
..+...|..+...+.-.--..+-.|..+||||||+|.+.. +.+.-...+...+|++..+|..+.+.|.+.+
T Consensus 20 ~~i~~~A~~i~~~~~~~~~~~Gr~~~~i~AA~iY~acr~~--~~p~t~~eIa~~~~i~~~~i~k~~k~i~~~L 90 (95)
T d1vola1 20 RNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQE--GVPRTFKEICAVSRISKKEIGRCFKLILKAL 90 (95)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHT--TCCCCHHHHHTTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHc--CCCCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3456667777765554444566889999999999999987 4555667888999999999999999988765
No 19
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=93.97 E-value=0.028 Score=43.24 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhc
Q 043577 214 DWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYIT 293 (402)
Q Consensus 214 dWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~it 293 (402)
.-|-+++..++|+..+...|..++.+.............-++++|+++| ++.+.. +.++.|++.++
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~A-------------cr~~~~-~~t~~eIa~~~ 72 (98)
T d1aisb1 7 SELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAA-------------CRLLKV-PRTLDEIADIA 72 (98)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHH-------------HHHHTC-CCCHHHHHHHT
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH-------------HHHcCC-CCCHHHHHHHH
Confidence 3467899999999999999999999999887777777999999999999 777755 55667776554
Q ss_pred c
Q 043577 294 D 294 (402)
Q Consensus 294 d 294 (402)
+
T Consensus 73 ~ 73 (98)
T d1aisb1 73 R 73 (98)
T ss_dssp T
T ss_pred C
Confidence 3
No 20
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.85 E-value=0.034 Score=42.49 Aligned_cols=67 Identities=13% Similarity=0.298 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhhc
Q 043577 214 DWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYIT 293 (402)
Q Consensus 214 dWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~it 293 (402)
.-|-.++..++|+..+...|..++.+......+.......++++|+++| ++.++. |.++.|++.++
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~~~~~~~~~~~Gr~~~~i~AA~iY~a-------------cr~~~~-p~t~~eIa~~~ 72 (95)
T d1vola1 7 KEITTMADRINLPRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIA-------------CRQEGV-PRTFKEICAVS 72 (95)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHH-------------HHHTTC-CCCHHHHHTTT
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH-------------HHHcCC-CCCHHHHHHHh
Confidence 4467889999999999999999999999887777778999999999999 776654 55666766554
Q ss_pred c
Q 043577 294 D 294 (402)
Q Consensus 294 d 294 (402)
+
T Consensus 73 ~ 73 (95)
T d1vola1 73 R 73 (95)
T ss_dssp C
T ss_pred C
Confidence 3
No 21
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.16 E-value=0.035 Score=43.62 Aligned_cols=68 Identities=10% Similarity=0.104 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCcchHHHHHHHHHHhhhhccccccccccchhhHHHHHhhcccccccccccccccccccCCccccchhhh
Q 043577 213 IDWLVEVSEEYRLVPETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMISATMDNKWKSDYVVSKYEEICPPQVEELCYI 292 (402)
Q Consensus 213 VdWL~eV~~~~~L~~eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IAaK~ee~~~~~~~vsK~EEi~~p~l~df~~i 292 (402)
.|||-+.|..++|+.++.-.|..++.+.....-+......-++++|+++| ++.... +.+.++++.+
T Consensus 5 ~d~i~Rf~s~L~L~~~i~~~A~~i~~~~~~~~~~~Gr~p~~iaAa~iY~a-------------~r~~~~-~~t~~eIa~~ 70 (109)
T d1vola2 5 GDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA-------------SQASAE-KRTQKEIGDI 70 (109)
T ss_dssp GGTHHHHHHHHTCCHHHHHHHHHHHHHHHHTTCSTTCCHHHHHHHHHHHH-------------HHTSSS-CCCHHHHHHH
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHH-------------HHHcCC-CCCHHHHHHH
Confidence 37888999999999999999999999999887777888999999999999 776554 4566666655
Q ss_pred cc
Q 043577 293 TD 294 (402)
Q Consensus 293 td 294 (402)
++
T Consensus 71 ~~ 72 (109)
T d1vola2 71 AG 72 (109)
T ss_dssp HT
T ss_pred HC
Confidence 54
No 22
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.92 E-value=1.7 Score=33.93 Aligned_cols=49 Identities=8% Similarity=0.133 Sum_probs=38.6
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHhhhhc-cccccccccchhhHHHHHhhc
Q 043577 215 WLVEVSEEYRLVPETLFLAVNYIDRYLS-GNVIIRQQLQLLGVACMMISA 263 (402)
Q Consensus 215 WL~eV~~~~~L~~eTl~LAV~~lDRfLs-~~~v~~~~LQLvgitCL~IAa 263 (402)
.|++....++.+.+....|.+++.-.+- ..-.-.-.-+.||++|++||+
T Consensus 6 ~ll~~~k~l~~~~~l~q~AW~~lnDs~r~T~lcL~~~P~~IA~a~I~LA~ 55 (113)
T d2ivxa2 6 DVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLAC 55 (113)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHhccCCeeeecCcHHHHHHHHHHHH
Confidence 3556666778899999999999987764 444456678899999999993
No 23
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.70 E-value=0.87 Score=35.22 Aligned_cols=35 Identities=14% Similarity=0.349 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhhhhccccccccccchhhHHHHHhh
Q 043577 228 ETLFLAVNYIDRYLSGNVIIRQQLQLLGVACMMIS 262 (402)
Q Consensus 228 eTl~LAV~~lDRfLs~~~v~~~~LQLvgitCL~IA 262 (402)
+....|-+++.-.+...-.-.-.-+.||++|++||
T Consensus 23 ~l~q~AW~~lNDs~rT~lcL~~~P~~IA~a~I~lA 57 (110)
T d2i53a2 23 KLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLA 57 (110)
T ss_dssp HHHHHHHHHHHHHTTTTGGGTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCchhccCcHHHHHHHHHHH
Confidence 45677888887777655566677889999999999
No 24
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.30 E-value=7.4 Score=30.61 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHh
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFIL 350 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l 350 (402)
.|+..+....+.+ .....+|..+.+--+.-..+..+.+-.+|+||+++|.++-
T Consensus 42 ~~i~~~~~~l~l~-~~t~~~A~~~~dRf~~~~~~~~~~~~lva~acl~LA~K~e 94 (144)
T d2i53a1 42 RFIFDVGTRLGLH-YDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVE 94 (144)
T ss_dssp HHHHHHHHHTTCC-HHHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCC-HHHHHHHHHHHHHHHhhCcccchhHHHHHHHHHHHHHHhh
Confidence 6666665555444 3455677777777788888999999999999999999986
No 25
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=66.27 E-value=25 Score=26.95 Aligned_cols=84 Identities=15% Similarity=0.046 Sum_probs=56.1
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhC--CChhhHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTF--YQPSDLCD 374 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tg--y~~~~L~~ 374 (402)
+|+-......+. ......+|-.+++.-+.......-.--++|++|+++|.++-. ..++--..+..+++ |+.+++..
T Consensus 36 dWl~~v~~~~~l-~~eTl~lAv~llDryl~~~~i~~~~lqLi~~tcL~IAsK~ee-~~~~~l~~l~~~~~~~~t~~ei~~ 113 (127)
T d1bu2a1 36 TWMHLLCESFEL-DKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRT-VKPMTVSKLTYLSCDCFTNLELIN 113 (127)
T ss_dssp HHHHHHHHHTTC-CTTHHHHHHHHHHHHTTTSCCCTTTHHHHHHHHHHHHHHHSS-SSCCCHHHHHHTTTTSSCHHHHHH
T ss_pred HHHHHHHHHHCC-ChHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHcCCCCHHHHHH
Confidence 555554443332 234567888888877766666667778999999999999863 33444456666664 78888876
Q ss_pred HHHHHHHH
Q 043577 375 CVKALHRL 382 (402)
Q Consensus 375 C~~~L~~l 382 (402)
.=..|...
T Consensus 114 mE~~IL~~ 121 (127)
T d1bu2a1 114 QEKDILEA 121 (127)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555543
No 26
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.62 E-value=9.7 Score=29.68 Aligned_cols=53 Identities=13% Similarity=0.121 Sum_probs=40.2
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHh
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFIL 350 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l 350 (402)
.|+..+....+.+. ....+|..+.+--+.-..+..+.+-.||+||+++|.++-
T Consensus 36 ~~i~~~~~~l~l~~-~t~~~A~~l~~Rf~~~~s~~~~~~~~va~acl~LA~K~e 88 (143)
T d2ivxa1 36 NLIQEMGQRLNVSQ-LTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVE 88 (143)
T ss_dssp HHHHHHHHHTTCCH-HHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCH-HHHHHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHhc
Confidence 66666655555443 345667777777777777889999999999999999996
No 27
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=60.22 E-value=23 Score=26.95 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=55.4
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhC--CChhhHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTF--YQPSDLCD 374 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tg--y~~~~L~~ 374 (402)
+|+-......+. +.....+|-.+++.-+.......-..-++|++|+++|.+... ...+.-..+..+++ |+.+++..
T Consensus 36 ~W~~~v~~~~~l-~~~t~~lAv~llDr~l~~~~i~~~~~qLi~~~cl~iAsK~ee-~~~~~l~~l~~~~~~~~t~~~i~~ 113 (128)
T d2cchb1 36 DWLVEVGEEYKL-QNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEE-IYPPEVAEFVYITDDTYTKKQVLR 113 (128)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC-SSCCCHHHHHHHTTSSSCHHHHHH
T ss_pred HHHHHHHHHhCC-ChHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHh-ccCCCHHHHHHHHcCCCCHHHHHH
Confidence 455544443333 344566777777776655555555667899999999999984 44455556666664 78888876
Q ss_pred HHHHHHHHH
Q 043577 375 CVKALHRLF 383 (402)
Q Consensus 375 C~~~L~~l~ 383 (402)
.=..|...+
T Consensus 114 mE~~IL~~L 122 (128)
T d2cchb1 114 MEHLVLKVL 122 (128)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 655555443
No 28
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=55.90 E-value=21 Score=27.98 Aligned_cols=71 Identities=14% Similarity=-0.068 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhhC--CChhhHHHHHHHHHHHH
Q 043577 312 QFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYTF--YQPSDLCDCVKALHRLF 383 (402)
Q Consensus 312 ~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~tg--y~~~~L~~C~~~L~~l~ 383 (402)
....+|-.+++.-+..........-++|++|+++|.++.. ..++....+..+++ |+.+++...=..|...+
T Consensus 63 etl~lAv~llDrfls~~~i~~~~lqL~a~tcL~IAsK~ee-~~~~~~~~l~~~~~~~yt~~ei~~mE~~IL~~L 135 (141)
T d1f5qb1 63 NVFPLAVALLDELFLSTRIDRENYQSTAAVALHIAGKVRA-YMPIKATQLAYLCGGATTADKLLTLEVKSLDTL 135 (141)
T ss_dssp THHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHC-SSCCCHHHHHHHHCTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh-cCcccHHHHHHHhcCCCCHHHHHHHHHHHHHHC
Confidence 3456677777765555555566778999999999999984 45555667777775 78888877665555543
No 29
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.14 E-value=61 Score=25.09 Aligned_cols=40 Identities=20% Similarity=0.231 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHh
Q 043577 311 MQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFIL 350 (402)
Q Consensus 311 ~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l 350 (402)
..+..+|..+.+--++...+..+.|-.+|+||+++|.++-
T Consensus 67 ~~~~~tA~~~~~RF~~~~s~~~~~~~li~~acl~LA~K~e 106 (151)
T d1jkwa1 67 RSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVD 106 (151)
T ss_dssp HHHHHHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHHHc
Confidence 3455667667766667778889999999999999999986
No 30
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.42 E-value=81 Score=24.05 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=52.1
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhccccc-ccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhh--CCChhhHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYK-MLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYT--FYQPSDLC 373 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~-fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~t--gy~~~~L~ 373 (402)
+|+-......+ .......+|-.+++.-+.... ...-.--++|++|+++|.+... ...+....+..++ .|+.+++.
T Consensus 48 dW~~~v~~~~~-l~~et~~lAv~llDryl~~~~~v~~~~lqL~a~acL~IAsK~ee-~~~~~~~~l~~~~~~~~t~~ei~ 125 (140)
T d1w98b2 48 DWLMEVCEVYK-LHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEE-IYPPKLHQFAYVTDGACSGDEIL 125 (140)
T ss_dssp HHHHHHHHHTT-CBHHHHHHHHHHHHHHHHHCCCCCGGGHHHHHHHHHHHHHHHHC-SSCCCHHHHHHTTTTSSCHHHHH
T ss_pred HHHHHHHHHhC-CChHHHHHHHHHHHHHHhccccccHHHHhHHHHHHHHHHHHHcc-cCCCCHHHHHHHHcCCCCHHHHH
Confidence 44444433333 334556677777765443222 2233446899999999999873 4455556666666 47888888
Q ss_pred HHHHHHHHHH
Q 043577 374 DCVKALHRLF 383 (402)
Q Consensus 374 ~C~~~L~~l~ 383 (402)
..=..|...+
T Consensus 126 ~mE~~IL~~L 135 (140)
T d1w98b2 126 TMELMIMKAL 135 (140)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 7666665543
No 31
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=35.42 E-value=86 Score=23.72 Aligned_cols=84 Identities=15% Similarity=0.053 Sum_probs=52.1
Q ss_pred HHHHHHHhhCCCCcHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHHHHhh--CCChhhHHH
Q 043577 297 RFIRAAQRSNKAPSMQFECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTLGHYT--FYQPSDLCD 374 (402)
Q Consensus 297 ~FL~~~~~~~~~~~~~l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L~~~t--gy~~~~L~~ 374 (402)
+|+.......+. ......+|-.+++.-+.-..+..-.--++|++|+++|.++-. ..++--..+..++ .|+.+++..
T Consensus 41 dWl~~v~~~~~l-~~et~~lAv~llDrfls~~~v~~~~lqLia~tcl~iAsK~ee-~~~~~~~~l~~~~~~~~t~~ei~~ 118 (132)
T d1g3nc1 41 TWMFSVCQEYNL-EPNVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRS-LTPISTSSLCYAAADSFSRQELID 118 (132)
T ss_dssp HHHHHHHHHTTC-CHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHC-SSCCCHHHHHHHTTTCSCHHHHHH
T ss_pred HHHHHHHHHhCC-CcchHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHhcc-cCCCCHHHHHHHHcCCCCHHHHHH
Confidence 555544443332 345567777777766655444444446899999999999873 3333334566666 578888876
Q ss_pred HHHHHHHH
Q 043577 375 CVKALHRL 382 (402)
Q Consensus 375 C~~~L~~l 382 (402)
.=..|...
T Consensus 119 mE~~IL~~ 126 (132)
T d1g3nc1 119 QEKELLEK 126 (132)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555543
No 32
>d1f5qb2 a.74.1.1 (B:147-252) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=34.52 E-value=11 Score=27.30 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHhCCCCCCChHHH---HHhhCCChhhHHHHHHHHHHHHh
Q 043577 313 FECLANYILELSLLDYKMLCYSPSLIAASATFLANFILYPLKKPWNSTL---GHYTFYQPSDLCDCVKALHRLFC 384 (402)
Q Consensus 313 l~~la~yllElsL~d~~fl~~~PS~IAaAai~lA~~~l~~~~~~W~~~L---~~~tgy~~~~L~~C~~~L~~l~~ 384 (402)
+..+++--.-.++.|-+-..-+|-+|..||+.+.+..- ...+...+ .+..-++.++|.+|...+--.+.
T Consensus 24 iynlcrpkifcalcdgrsamkrpvlitlacmhltmnqk---ydyyenridgvckslyitkeelhqccdlvdiaiv 95 (106)
T d1f5qb2 24 IYNLCRPKIFCALCDGRSAMKRPVLITLACMHLTMNQK---YDYYENRIDGVCKSLYITKEELHQCCDLVDIAIV 95 (106)
T ss_dssp HHHHHHHHHHHHHHCHHHHTSCHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhccchheeeecCChhhhcCchhhhHHHHHHHHhcc---hhHHHhhhhhhhhhheecHHHHHhhhhhhheEEE
Confidence 44555544445788888888999999999999986432 12223333 33446799999999987654443
Done!